Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:57:44 (3796582): wrapper (7.7.26015): starting
18:57:44 (3796582): wrapper: running run_atlas (--nthreads 8)
[2025-10-08 18:57:44] Arguments: --nthreads 8
[2025-10-08 18:57:44] Threads: 8
[2025-10-08 18:57:44] Checking for CVMFS
[2025-10-08 18:57:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 18:57:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 18:57:44] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 18:57:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 18:57:44] 2.13.2.0 129118 104022 578592 151488 2 577 23322204 39288833 9133 16776704 0 113925069 99.547 141543869 32707 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-08 18:57:44] CVMFS is ok
[2025-10-08 18:57:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-08 18:57:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-08 18:57:44] Further information can be found at the LHC@home message board.
[2025-10-08 18:57:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 18:57:44] Checking for apptainer binary...
[2025-10-08 18:57:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 18:57:44] Running /usr/bin/apptainer --version
[2025-10-08 18:57:44] apptainer version 1.4.3-1.el9
[2025-10-08 18:57:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 18:57:45] c-211-26.aglt2.org
[2025-10-08 18:57:45] apptainer works
[2025-10-08 18:57:45] Set ATHENA_PROC_NUMBER=8
[2025-10-08 18:57:45] Set ATHENA_CORE_NUMBER=8
[2025-10-08 18:57:45] Starting ATLAS job with PandaID=6836596876
[2025-10-08 18:57:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 08:43:36]  *** The last 200 lines of the pilot log: ***
[2025-10-09 08:43:36] 2025-10-09 12:32:50,084 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 08:43:36] 2025-10-09 12:32:50,084 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 08:43:36] 2025-10-09 12:32:50,210 | INFO     | fitting pss+swap vs Time
[2025-10-09 08:43:36] 2025-10-09 12:32:50,211 | INFO     | sum of square deviations: 158762285960.8801
[2025-10-09 08:43:36] 2025-10-09 12:32:50,244 | INFO     | sum of deviations: 72242958526.43002
[2025-10-09 08:43:36] 2025-10-09 12:32:50,244 | INFO     | mean x: 1759988688.33
[2025-10-09 08:43:36] 2025-10-09 12:32:50,244 | INFO     | mean y: 2517127.28625
[2025-10-09 08:43:36] 2025-10-09 12:32:50,244 | INFO     | -- intersect: -798345552.7166055
[2025-10-09 08:43:36] 2025-10-09 12:32:50,245 | INFO     | intersect: -798345552.7166055
[2025-10-09 08:43:36] 2025-10-09 12:32:50,246 | INFO     | chi2: 2.1762180477198645
[2025-10-09 08:43:36] 2025-10-09 12:32:50,252 | INFO     | sum of square deviations: 155804207468.083
[2025-10-09 08:43:36] 2025-10-09 12:32:50,310 | INFO     | sum of deviations: 120284445521.85649
[2025-10-09 08:43:36] 2025-10-09 12:32:50,311 | INFO     | mean x: 1759988535.8339622
[2025-10-09 08:43:36] 2025-10-09 12:32:50,311 | INFO     | mean y: 2519590.9534591194
[2025-10-09 08:43:36] 2025-10-09 12:32:50,311 | INFO     | -- intersect: -1356232195.008287
[2025-10-09 08:43:36] 2025-10-09 12:32:50,311 | INFO     | intersect: -1356232195.008287
[2025-10-09 08:43:36] 2025-10-09 12:32:50,316 | INFO     | chi2: 1.4870344627805867
[2025-10-09 08:43:36] 2025-10-09 12:32:50,317 | INFO     | current chi2=1.4870344627805867 (change=31.668866346429343 %)
[2025-10-09 08:43:36] 2025-10-09 12:32:50,318 | INFO     | sum of square deviations: 152883058040.43552
[2025-10-09 08:43:36] 2025-10-09 12:32:50,377 | INFO     | sum of deviations: 118624054854.60751
[2025-10-09 08:43:36] 2025-10-09 12:32:50,377 | INFO     | mean x: 1759988383.3367088
[2025-10-09 08:43:36] 2025-10-09 12:32:50,377 | INFO     | mean y: 2519504.2721518986
[2025-10-09 08:43:36] 2025-10-09 12:32:50,377 | INFO     | -- intersect: -1363079543.8132615
[2025-10-09 08:43:36] 2025-10-09 12:32:50,378 | INFO     | intersect: -1363079543.8132615
[2025-10-09 08:43:36] 2025-10-09 12:32:50,379 | INFO     | chi2: 1.487088152550784
[2025-10-09 08:43:36] 2025-10-09 12:32:50,379 | INFO     | current chi2=1.487088152550784 (change=-0.003610526288467378 %)
[2025-10-09 08:43:36] 2025-10-09 12:32:50,379 | INFO     | right removable region: 789
[2025-10-09 08:43:36] 2025-10-09 12:32:50,388 | INFO     | sum of square deviations: 155803851227.41373
[2025-10-09 08:43:36] 2025-10-09 12:32:50,453 | INFO     | sum of deviations: -45220712549.56224
[2025-10-09 08:43:36] 2025-10-09 12:32:50,453 | INFO     | mean x: 1759988840.83522
[2025-10-09 08:43:36] 2025-10-09 12:32:50,453 | INFO     | mean y: 2523164.041509434
[2025-10-09 08:43:36] 2025-10-09 12:32:50,453 | INFO     | -- intersect: 513344615.72487587
[2025-10-09 08:43:36] 2025-10-09 12:32:50,454 | INFO     | intersect: 513344615.72487587
[2025-10-09 08:43:36] 2025-10-09 12:32:50,455 | INFO     | chi2: 0.8163552951770123
[2025-10-09 08:43:36] 2025-10-09 12:32:50,465 | INFO     | current chi2=0.8163552951770123 (change=62.4874310718841 %)
[2025-10-09 08:43:36] 2025-10-09 12:32:50,467 | INFO     | sum of square deviations: 152882393931.40378
[2025-10-09 08:43:36] 2025-10-09 12:32:50,570 | INFO     | sum of deviations: -29153015159.16328
[2025-10-09 08:43:36] 2025-10-09 12:32:50,570 | INFO     | mean x: 1759988993.3405063
[2025-10-09 08:43:36] 2025-10-09 12:32:50,570 | INFO     | mean y: 2522322.5582278483
[2025-10-09 08:43:36] 2025-10-09 12:32:50,570 | INFO     | -- intersect: 338133143.9444886
[2025-10-09 08:43:36] 2025-10-09 12:32:50,570 | INFO     | intersect: 338133143.9444886
[2025-10-09 08:43:36] 2025-10-09 12:32:50,572 | INFO     | chi2: 0.7885017162935315
[2025-10-09 08:43:36] 2025-10-09 12:32:50,572 | INFO     | current chi2=0.7885017162935315 (change=3.4119431879769055 %)
[2025-10-09 08:43:36] 2025-10-09 12:32:50,572 | INFO     | left removable region: 20
[2025-10-09 08:43:36] 2025-10-09 12:32:50,638 | INFO     | sum of square deviations: 141011567028.8324
[2025-10-09 08:43:36] 2025-10-09 12:32:50,953 | INFO     | sum of deviations: 60686285991.54754
[2025-10-09 08:43:36] 2025-10-09 12:32:50,953 | INFO     | mean x: 1759988962.8595579
[2025-10-09 08:43:36] 2025-10-09 12:32:50,953 | INFO     | mean y: 2522444.5513654095
[2025-10-09 08:43:36] 2025-10-09 12:32:50,954 | INFO     | -- intersect: -754913245.247214
[2025-10-09 08:43:36] 2025-10-09 12:32:50,954 | INFO     | intersect: -754913245.247214
[2025-10-09 08:43:36] 2025-10-09 12:32:50,967 | INFO     | chi2: 0.0028847024922111254
[2025-10-09 08:43:36] 2025-10-09 12:32:50,968 | INFO     | -- intersect: -754913245.247214
[2025-10-09 08:43:36] 2025-10-09 12:32:50,968 | INFO     | current memory leak: 0.43 B/s (using 769 data points, chi2=0.00)
[2025-10-09 08:43:36] 2025-10-09 12:32:50,969 | INFO     | could have reported an average CPU frequency of 2899 MHz (30 samples)
[2025-10-09 08:43:36] 2025-10-09 12:32:50,969 | INFO     | ..............................
[2025-10-09 08:43:36] 2025-10-09 12:32:50,970 | INFO     | . Timing measurements:
[2025-10-09 08:43:36] 2025-10-09 12:32:50,970 | INFO     | . get job = 0 s
[2025-10-09 08:43:36] 2025-10-09 12:32:50,970 | INFO     | . initial setup = 2 s
[2025-10-09 08:43:36] 2025-10-09 12:32:50,970 | INFO     | . payload setup = 7 s
[2025-10-09 08:43:36] 2025-10-09 12:32:50,970 | INFO     | . stage-in = 0 s
[2025-10-09 08:43:36] 2025-10-09 12:32:50,970 | INFO     | . payload execution = 48799 s
[2025-10-09 08:43:36] 2025-10-09 12:32:50,970 | INFO     | . stage-out = 10 s
[2025-10-09 08:43:36] 2025-10-09 12:32:50,971 | INFO     | . log creation = 1 s
[2025-10-09 08:43:36] 2025-10-09 12:32:50,971 | INFO     | ..............................
[2025-10-09 08:43:36] 2025-10-09 12:32:52,035 | INFO     | time since job start (48889s) is within the limit (172800.0s)
[2025-10-09 08:43:36] 2025-10-09 12:32:52,120 | INFO     | 
[2025-10-09 08:43:36] 2025-10-09 12:32:52,120 | INFO     | job summary report
[2025-10-09 08:43:36] 2025-10-09 12:32:52,121 | INFO     | --------------------------------------------------
[2025-10-09 08:43:36] 2025-10-09 12:32:52,121 | INFO     | PanDA job id: 6836596876
[2025-10-09 08:43:36] 2025-10-09 12:32:52,121 | INFO     | task id: 46676269
[2025-10-09 08:43:36] 2025-10-09 12:32:52,121 | INFO     | errors: (none)
[2025-10-09 08:43:36] 2025-10-09 12:32:52,121 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 08:43:36] 2025-10-09 12:32:52,121 | INFO     | pilot state: finished 
[2025-10-09 08:43:36] 2025-10-09 12:32:52,122 | INFO     | transexitcode: 0
[2025-10-09 08:43:36] 2025-10-09 12:32:52,122 | INFO     | exeerrorcode: 0
[2025-10-09 08:43:36] 2025-10-09 12:32:52,169 | INFO     | exeerrordiag: 
[2025-10-09 08:43:36] 2025-10-09 12:32:52,169 | INFO     | exitcode: 0
[2025-10-09 08:43:36] 2025-10-09 12:32:52,170 | INFO     | exitmsg: OK
[2025-10-09 08:43:36] 2025-10-09 12:32:52,170 | INFO     | cpuconsumptiontime: 76337 s
[2025-10-09 08:43:36] 2025-10-09 12:32:52,170 | INFO     | nevents: 400
[2025-10-09 08:43:36] 2025-10-09 12:32:52,170 | INFO     | neventsw: 0
[2025-10-09 08:43:36] 2025-10-09 12:32:52,170 | INFO     | pid: 3810994
[2025-10-09 08:43:36] 2025-10-09 12:32:52,170 | INFO     | pgrp: 3810994
[2025-10-09 08:43:36] 2025-10-09 12:32:52,170 | INFO     | corecount: 8
[2025-10-09 08:43:36] 2025-10-09 12:32:52,171 | INFO     | event service: False
[2025-10-09 08:43:36] 2025-10-09 12:32:52,171 | INFO     | sizes: {0: 2348675, 1: 2348874, 5: 2349136, 12: 2349192, 48812: 2394507, 48814: 2394506, 48826: 2403688, 48828: 2403744, 48870: 2403938}
[2025-10-09 08:43:36] 2025-10-09 12:32:52,171 | INFO     | --------------------------------------------------
[2025-10-09 08:43:36] 2025-10-09 12:32:52,171 | INFO     | 
[2025-10-09 08:43:36] 2025-10-09 12:32:52,171 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-09 08:43:36] 2025-10-09 12:32:52,353 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 08:43:36] 2025-10-09 12:32:52,353 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 08:43:36] 2025-10-09 12:32:52,354 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 08:43:36] 2025-10-09 12:32:52,354 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 08:43:36] 2025-10-09 12:32:52,354 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 08:43:36] 2025-10-09 12:32:52,354 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 08:43:36] 2025-10-09 12:32:52,354 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 08:43:36] 2025-10-09 12:32:52,354 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 08:43:36] 2025-10-09 12:32:52,354 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 08:43:36] 2025-10-09 12:32:52,355 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 08:43:36] 2025-10-09 12:32:52,355 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 08:43:36] 2025-10-09 12:32:52,355 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 08:43:36] 2025-10-09 12:32:52,355 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 08:43:36] 2025-10-09 12:32:52,355 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 08:43:36] 2025-10-09 12:32:52,355 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 08:43:36] 2025-10-09 12:32:52,356 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 08:43:36] 2025-10-09 12:32:52,356 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 08:43:36] 2025-10-09 12:32:52,446 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 08:43:36] 2025-10-09 12:32:52,446 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 08:43:36] 2025-10-09 12:32:52,447 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 08:43:36] 2025-10-09 12:32:52,447 | INFO     | job 6836596876 has completed (purged errors)
[2025-10-09 08:43:36] 2025-10-09 12:32:52,447 | INFO     | overall cleanup function is called
[2025-10-09 08:43:36] 2025-10-09 12:32:53,456 | INFO     | --- collectZombieJob: --- 10, [3810994]
[2025-10-09 08:43:36] 2025-10-09 12:32:53,456 | INFO     | zombie collector waiting for pid 3810994
[2025-10-09 08:43:36] 2025-10-09 12:32:53,456 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 08:43:36] 2025-10-09 12:32:53,457 | INFO     | collected zombie processes
[2025-10-09 08:43:36] 2025-10-09 12:32:53,457 | INFO     | will attempt to kill all subprocesses of pid=3810994
[2025-10-09 08:43:36] 2025-10-09 12:32:56,399 | INFO     | process IDs to be killed: [3810994] (in reverse order)
[2025-10-09 08:43:36] 2025-10-09 12:32:56,704 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 08:43:36] 2025-10-09 12:32:56,705 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 08:43:36] 2025-10-09 12:32:56,721 | INFO     | did not find any defunct processes belonging to 3810994
[2025-10-09 08:43:36] 2025-10-09 12:32:56,857 | INFO     | did not find any defunct processes belonging to 3810994
[2025-10-09 08:43:36] 2025-10-09 12:32:56,857 | INFO     | ready for new job
[2025-10-09 08:43:36] 2025-10-09 12:32:56,858 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 08:43:36] 2025-10-09 12:32:56,865 | INFO     | ***************************************
[2025-10-09 08:43:36] 2025-10-09 12:32:56,865 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-09 08:43:36] 2025-10-09 12:32:56,865 | INFO     | ***************************************
[2025-10-09 08:43:36] 2025-10-09 12:32:56,865 | INFO     | 
[2025-10-09 08:43:36] 2025-10-09 12:32:57,049 | INFO     | architecture information:
[2025-10-09 08:43:36] 2025-10-09 12:32:57,072 | INFO     | executing command: cat /etc/os-release
[2025-10-09 08:43:36] 2025-10-09 12:32:57,226 | INFO     | cat /etc/os-release:
[2025-10-09 08:43:36] NAME="CentOS Linux"
[2025-10-09 08:43:36] VERSION="7 (Core)"
[2025-10-09 08:43:36] ID="centos"
[2025-10-09 08:43:36] ID_LIKE="rhel fedora"
[2025-10-09 08:43:36] VERSION_ID="7"
[2025-10-09 08:43:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 08:43:36] ANSI_COLOR="0;31"
[2025-10-09 08:43:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 08:43:36] HOME_URL="https://www.centos.org/"
[2025-10-09 08:43:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 08:43:36] 
[2025-10-09 08:43:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 08:43:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 08:43:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 08:43:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 08:43:36] 
[2025-10-09 08:43:36] 2025-10-09 12:32:57,227 | INFO     | ***************************************
[2025-10-09 08:43:36] 2025-10-09 12:32:57,732 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-09 08:43:36] 2025-10-09 12:32:57,999 | INFO     | sufficient remaining disk space (52545191936 B)
[2025-10-09 08:43:36] 2025-10-09 12:32:58,002 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 08:43:36] 2025-10-09 12:32:58,003 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 08:43:36] 2025-10-09 12:32:58,003 | INFO     | update_server=False
[2025-10-09 08:43:36] 2025-10-09 12:32:58,003 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 08:43:36] 2025-10-09 12:32:58,003 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 08:43:36] 2025-10-09 12:32:58,004 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 08:43:36] 2025-10-09 12:32:58,101 | INFO     | all job control threads have been joined
[2025-10-09 08:43:36] 2025-10-09 12:32:58,463 | INFO     | all data control threads have been joined
[2025-10-09 08:43:36] 2025-10-09 12:32:58,877 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 08:43:36] 2025-10-09 12:32:58,877 | INFO     | aborting loop
[2025-10-09 08:43:36] 2025-10-09 12:32:59,059 | INFO     | [job] retrieve thread has finished
[2025-10-09 08:43:36] 2025-10-09 12:32:59,072 | INFO     | [job] queue monitor thread has finished
[2025-10-09 08:43:36] 2025-10-09 12:32:59,107 | INFO     | [job] control thread has finished
[2025-10-09 08:43:36] 2025-10-09 12:32:59,222 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 08:43:36] 2025-10-09 12:32:59,236 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 08:43:36] 2025-10-09 12:32:59,433 | INFO     | all payload control threads have been joined
[2025-10-09 08:43:36] 2025-10-09 12:32:59,495 | INFO     | [data] control thread has finished
[2025-10-09 08:43:36] 2025-10-09 12:32:59,878 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 08:43:36] 2025-10-09 12:32:59,885 | INFO     | [job] job monitor thread has finished
[2025-10-09 08:43:36] 2025-10-09 12:32:59,982 | INFO     | [payload] failed_post thread has finished
[2025-10-09 08:43:36] 2025-10-09 12:33:00,065 | INFO     | [data] copytool_out thread has finished
[2025-10-09 08:43:36] 2025-10-09 12:33:00,257 | INFO     | [payload] validate_post thread has finished
[2025-10-09 08:43:36] 2025-10-09 12:33:00,408 | INFO     | [data] copytool_in thread has finished
[2025-10-09 08:43:36] 2025-10-09 12:33:00,439 | INFO     | [payload] control thread has finished
[2025-10-09 08:43:36] 2025-10-09 12:33:00,472 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 08:43:36] 2025-10-09 12:33:00,490 | INFO     | [job] validate thread has finished
[2025-10-09 08:43:36] 2025-10-09 12:33:01,389 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 08:43:36] 2025-10-09 12:33:05,441 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 08:43:36] 2025-10-09 12:33:29,351 | INFO     | PID=3803473 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-09 08:43:36] 2025-10-09 12:33:29,352 | INFO     | .. there are 27 such processes running
[2025-10-09 08:43:36] 2025-10-09 12:33:29,353 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 08:43:36] 2025-10-09 12:33:29,353 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 08:43:36] 2025-10-09 12:33:29,353 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 08:43:36] 2025-10-09 12:33:46,907 | INFO     | [monitor] cgroup control has ended
[2025-10-09 08:43:36] 2025-10-09 12:33:47,644 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140258583496512)>', '<ExcThread(monitor, started 140258238777088)>']
[2025-10-09 08:43:36] 2025-10-09 12:33:48,511 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 08:43:36] 2025-10-09 12:33:48,511 | INFO     | [monitor] control thread has ended
[2025-10-09 08:43:36] 2025-10-09 12:33:52,688 | INFO     | all workflow threads have been joined
[2025-10-09 08:43:36] 2025-10-09 12:33:52,688 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 08:43:36] 2025-10-09 12:33:52,689 | INFO     | traces error code: 0
[2025-10-09 08:43:36] 2025-10-09 12:33:52,689 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 08:43:36] 2025-10-09 12:33:53,328 [wrapper] ==== pilot stdout END ====
[2025-10-09 08:43:36] 2025-10-09 12:33:53,374 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 08:43:36] 2025-10-09 12:33:53,389 [wrapper] pilotpid: 3803473
[2025-10-09 08:43:36] 2025-10-09 12:33:53,418 [wrapper] Pilot exit status: 0
[2025-10-09 08:43:36] 2025-10-09 12:33:53,543 [wrapper] pandaids: 6836596876
[2025-10-09 08:43:36] 2025-10-09 12:33:54,047 [wrapper] cleanup supervisor_pilot 3056850 3803474
[2025-10-09 08:43:36] 2025-10-09 12:33:54,102 [wrapper] Test setup, not cleaning
[2025-10-09 08:43:36] 2025-10-09 12:33:54,128 [wrapper] apfmon messages muted
[2025-10-09 08:43:36] 2025-10-09 12:33:54,164 [wrapper] ==== wrapper stdout END ====
[2025-10-09 08:43:36] 2025-10-09 12:33:54,198 [wrapper] ==== wrapper stderr END ====
[2025-10-09 08:43:36]  *** Error codes and diagnostics ***
[2025-10-09 08:43:36]     "exeErrorCode": 0,
[2025-10-09 08:43:36]     "exeErrorDiag": "",
[2025-10-09 08:43:36]     "pilotErrorCode": 0,
[2025-10-09 08:43:36]     "pilotErrorDiag": "",
[2025-10-09 08:43:36]  *** Listing of results directory ***
[2025-10-09 08:43:36] total 413876
[2025-10-09 08:43:36] -rw-r--r--. 1 boincer umatlas    557409 Oct  8 18:26 pilot3.tar.gz
[2025-10-09 08:43:36] -rw-r--r--. 1 boincer umatlas      5112 Oct  8 18:56 queuedata.json
[2025-10-09 08:43:36] -rwx------. 1 boincer umatlas     36292 Oct  8 18:56 runpilot2-wrapper.sh
[2025-10-09 08:43:36] -rw-r--r--. 1 boincer umatlas       100 Oct  8 18:57 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 08:43:36] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  8 18:57 run_atlas
[2025-10-09 08:43:36] -rw-r--r--. 1 boincer umatlas       105 Oct  8 18:57 job.xml
[2025-10-09 08:43:36] -rw-r--r--. 2 boincer umatlas 220101619 Oct  8 18:57 EVNT.46676267._000307.pool.root.1
[2025-10-09 08:43:36] -rw-r--r--. 2 boincer umatlas     15120 Oct  8 18:57 start_atlas.sh
[2025-10-09 08:43:36] drwxrwx--x. 2 boincer umatlas      4096 Oct  8 18:57 shared
[2025-10-09 08:43:36] -rw-r--r--. 2 boincer umatlas    569678 Oct  8 18:57 input.tar.gz
[2025-10-09 08:43:36] -rw-r--r--. 1 boincer umatlas         0 Oct  8 18:57 boinc_lockfile
[2025-10-09 08:43:36] -rw-r--r--. 1 boincer umatlas      2545 Oct  8 18:57 pandaJob.out
[2025-10-09 08:43:36] -rw-------. 1 boincer umatlas    979306 Oct  8 18:58 agis_schedconf.cvmfs.json
[2025-10-09 08:43:36] drwx------. 5 boincer umatlas      4096 Oct  8 18:58 pilot3
[2025-10-09 08:43:36] -rw-------. 1 boincer umatlas 187570789 Oct  9 08:29 HITS.46676269._007719.pool.root.1
[2025-10-09 08:43:36] -rw-r--r--. 1 boincer umatlas       531 Oct  9 08:30 boinc_task_state.xml
[2025-10-09 08:43:36] -rw-------. 1 boincer umatlas      1047 Oct  9 08:31 memory_monitor_summary.json
[2025-10-09 08:43:36] -rw-------. 1 boincer umatlas   1560401 Oct  9 08:32 agis_ddmendpoints.agis.ALL.json
[2025-10-09 08:43:36] -rw-------. 1 boincer umatlas    816514 Oct  9 08:32 log.46676269._007719.job.log.tgz.1
[2025-10-09 08:43:36] -rw-------. 1 boincer umatlas      7819 Oct  9 08:32 heartbeat.json
[2025-10-09 08:43:36] -rw-------. 1 boincer umatlas        95 Oct  9 08:33 pilot_heartbeat.json
[2025-10-09 08:43:36] -rw-------. 1 boincer umatlas      4824 Oct  9 08:33 pilotlog.txt
[2025-10-09 08:43:36] -rw-------. 1 boincer umatlas   5299227 Oct  9 08:33 log.46676269._007719.job.log.1
[2025-10-09 08:43:36] -rw-------. 1 boincer umatlas       357 Oct  9 08:33 output.list
[2025-10-09 08:43:36] -rw-r--r--. 1 boincer umatlas       620 Oct  9 08:33 runtime_log
[2025-10-09 08:43:36] -rw-------. 1 boincer umatlas   6133760 Oct  9 08:33 result.tar.gz
[2025-10-09 08:43:36] -rw-r--r--. 1 boincer umatlas      8704 Oct  9 08:33 runtime_log.err
[2025-10-09 08:43:36] -rw-------. 1 boincer umatlas       658 Oct  9 08:33 pMLLDmZGsQ8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmmMYNDmguOwsm.diag
[2025-10-09 08:43:36] -rw-r--r--. 1 boincer umatlas      6523 Oct  9 08:38 init_data.xml
[2025-10-09 08:43:36] -rw-r--r--. 1 boincer umatlas        28 Oct  9 08:43 wrapper_checkpoint.txt
[2025-10-09 08:43:36] -rw-r--r--. 1 boincer umatlas      8192 Oct  9 08:43 boinc_mmap_file
[2025-10-09 08:43:36] -rw-r--r--. 1 boincer umatlas     21018 Oct  9 08:43 stderr.txt
[2025-10-09 08:43:36] HITS file was successfully produced:
[2025-10-09 08:43:36] -rw-------. 1 boincer umatlas 187570789 Oct  9 08:29 shared/HITS.pool.root.1
[2025-10-09 08:43:36]  *** Contents of shared directory: ***
[2025-10-09 08:43:36] total 404696
[2025-10-09 08:43:36] -rw-r--r--. 2 boincer umatlas 220101619 Oct  8 18:57 ATLAS.root_0
[2025-10-09 08:43:36] -rw-r--r--. 2 boincer umatlas     15120 Oct  8 18:57 start_atlas.sh
[2025-10-09 08:43:36] -rw-r--r--. 2 boincer umatlas    569678 Oct  8 18:57 input.tar.gz
[2025-10-09 08:43:36] -rw-------. 1 boincer umatlas 187570789 Oct  9 08:29 HITS.pool.root.1
[2025-10-09 08:43:36] -rw-------. 1 boincer umatlas   6133760 Oct  9 08:33 result.tar.gz
08:43:38 (3796582): run_atlas exited; CPU time 78355.511586
08:43:38 (3796582): called boinc_finish(0)

</stderr_txt>
]]>

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