Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:18:07 (813887): wrapper (7.7.26015): starting
15:18:07 (813887): wrapper: running run_atlas (--nthreads 11)
[2025-10-08 15:18:07] Arguments: --nthreads 11
[2025-10-08 15:18:07] Threads: 11
[2025-10-08 15:18:07] Checking for CVMFS
[2025-10-08 15:18:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 15:18:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 15:18:08] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 15:18:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 15:18:08] 2.13.2.0 3310087 13322 175916 151483 3 321 32614673 40960000 14118 16776704 0 26874684 99.758 16559906 37476 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-08 15:18:08] CVMFS is ok
[2025-10-08 15:18:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-08 15:18:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-08 15:18:08] Further information can be found at the LHC@home message board.
[2025-10-08 15:18:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 15:18:08] Checking for apptainer binary...
[2025-10-08 15:18:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 15:18:08] Running /usr/bin/apptainer --version
[2025-10-08 15:18:08] apptainer version 1.4.3-1.el9
[2025-10-08 15:18:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 15:18:08] c-206-38.aglt2.org
[2025-10-08 15:18:08] apptainer works
[2025-10-08 15:18:08] Set ATHENA_PROC_NUMBER=11
[2025-10-08 15:18:08] Set ATHENA_CORE_NUMBER=11
[2025-10-08 15:18:08] Starting ATLAS job with PandaID=6826039397
[2025-10-08 15:18:08] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-08 16:41:36]  *** The last 200 lines of the pilot log: ***
[2025-10-08 16:41:36] 2025-10-08 20:40:49,746 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-08 16:41:36] 2025-10-08 20:40:49,747 | INFO     | summary of transferred files:
[2025-10-08 16:41:36] 2025-10-08 20:40:49,747 | INFO     |  -- lfn=log.46373048._060489.job.log.tgz.1, status_code=0, status=transferred
[2025-10-08 16:41:36] 2025-10-08 20:40:49,747 | INFO     | stage-out finished correctly
[2025-10-08 16:41:36] 2025-10-08 20:40:51,001 | INFO     | time since job start (4948s) is within the limit (172800.0s)
[2025-10-08 16:41:36] 2025-10-08 20:40:51,278 | WARNING  | process 824270 can no longer be monitored (due to stat problems) - aborting
[2025-10-08 16:41:36] 2025-10-08 20:40:51,278 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6826039397/memory_monitor_summary.json (trf name=prmon)
[2025-10-08 16:41:36] 2025-10-08 20:40:51,279 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 4254665 B
[2025-10-08 16:41:36] 2025-10-08 20:40:51,279 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 15787 B
[2025-10-08 16:41:36] 2025-10-08 20:40:51,279 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-08 16:41:36] 2025-10-08 20:40:51,298 | INFO     | sufficient remaining disk space (86481305600 B)
[2025-10-08 16:41:36] 2025-10-08 20:40:51,298 | INFO     | work directory size check will use 2537553920 B as a max limit (10% grace limit added)
[2025-10-08 16:41:36] 2025-10-08 20:40:51,299 | INFO     | size of work directory /tmp/boinchome/slots/0/PanDA_Pilot-6826039397: 4555515 B (within 2537553920 B limit)
[2025-10-08 16:41:36] 2025-10-08 20:40:51,299 | INFO     | pfn file=/tmp/boinchome/slots/0/PanDA_Pilot-6826039397/HITS.46373048._060489.pool.root.1 does not exist (skip from workdir size calculation)
[2025-10-08 16:41:36] 2025-10-08 20:40:51,299 | INFO     | total size of present files: 0 B (workdir size: 4555515 B)
[2025-10-08 16:41:36] 2025-10-08 20:40:51,299 | INFO     | output file size check: skipping output file /tmp/boinchome/slots/0/PanDA_Pilot-6826039397/HITS.46373048._060489.pool.root.1 since it does not exist
[2025-10-08 16:41:36] 2025-10-08 20:40:51,511 | INFO     | number of running child processes to parent process 824270: 1
[2025-10-08 16:41:36] 2025-10-08 20:40:51,511 | INFO     | maximum number of monitored processes: 6
[2025-10-08 16:41:36] 2025-10-08 20:40:51,823 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-08 16:41:36] 2025-10-08 20:40:53,007 | INFO     | time since job start (4950s) is within the limit (172800.0s)
[2025-10-08 16:41:36] 2025-10-08 20:40:54,015 | INFO     | monitor loop #364: job 0:6826039397 is in state 'finished'
[2025-10-08 16:41:36] 2025-10-08 20:40:54,015 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 16:41:36] 2025-10-08 20:40:54,381 | INFO     | job 6826039397 has state=finished
[2025-10-08 16:41:36] 2025-10-08 20:40:54,381 | INFO     | preparing for final server update for job 6826039397 in state='finished'
[2025-10-08 16:41:36] 2025-10-08 20:40:54,382 | INFO     | this job has now completed (state=finished)
[2025-10-08 16:41:36] 2025-10-08 20:40:54,382 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-08 16:41:36] 2025-10-08 20:40:54,382 | INFO     | log transfer has been attempted: DONE
[2025-10-08 16:41:36] 2025-10-08 20:40:54,382 | INFO     | job 6826039397 has finished - writing final server update
[2025-10-08 16:41:36] 2025-10-08 20:40:54,383 | INFO     | total number of processed events: 400 (read)
[2025-10-08 16:41:36] 2025-10-08 20:40:54,384 | INFO     | executing command: lscpu
[2025-10-08 16:41:36] 2025-10-08 20:40:54,435 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-08 16:41:36] 2025-10-08 20:40:55,013 | INFO     | time since job start (4952s) is within the limit (172800.0s)
[2025-10-08 16:41:36] 2025-10-08 20:40:56,518 | INFO     | monitor loop #365: job 0:6826039397 is in state 'finished'
[2025-10-08 16:41:36] 2025-10-08 20:40:56,518 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 16:41:36] 2025-10-08 20:40:57,018 | INFO     | time since job start (4954s) is within the limit (172800.0s)
[2025-10-08 16:41:36] 2025-10-08 20:40:58,379 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-08 16:41:36] 2025-10-08 20:40:58,383 | INFO     | found 32 cores (16 cores per socket, 2 sockets) HT, CPU MHz: 3266.9214062500005
[2025-10-08 16:41:36] 2025-10-08 20:40:58,393 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6826039397/memory_monitor_summary.json (trf name=prmon)
[2025-10-08 16:41:36] 2025-10-08 20:40:58,393 | INFO     | extracted standard info from prmon json
[2025-10-08 16:41:36] 2025-10-08 20:40:58,393 | INFO     | extracted standard memory fields from prmon json
[2025-10-08 16:41:36] 2025-10-08 20:40:58,393 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-08 16:41:36] 2025-10-08 20:40:58,394 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-08 16:41:36] 2025-10-08 20:40:58,394 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-08 16:41:36] 2025-10-08 20:40:58,395 | INFO     | fitting pss+swap vs Time
[2025-10-08 16:41:36] 2025-10-08 20:40:58,395 | INFO     | sum of square deviations: 125628316.01351355
[2025-10-08 16:41:36] 2025-10-08 20:40:58,396 | INFO     | sum of deviations: -11093582881.472971
[2025-10-08 16:41:36] 2025-10-08 20:40:58,396 | INFO     | mean x: 1759953664.5810812
[2025-10-08 16:41:36] 2025-10-08 20:40:58,396 | INFO     | mean y: 2958103.6621621624
[2025-10-08 16:41:36] 2025-10-08 20:40:58,396 | INFO     | -- intersect: 155415308321.60294
[2025-10-08 16:41:36] 2025-10-08 20:40:58,396 | INFO     | intersect: 155415308321.60294
[2025-10-08 16:41:36] 2025-10-08 20:40:58,396 | INFO     | chi2: 0.14449008139307057
[2025-10-08 16:41:36] 2025-10-08 20:40:58,396 | INFO     | -- intersect: 155415308321.60294
[2025-10-08 16:41:36] 2025-10-08 20:40:58,396 | INFO     | current memory leak: -88.30 B/s (using 74 data points, chi2=0.14)
[2025-10-08 16:41:36] 2025-10-08 20:40:58,396 | INFO     | could have reported an average CPU frequency of 3266 MHz (6 samples)
[2025-10-08 16:41:36] 2025-10-08 20:40:58,397 | INFO     | ..............................
[2025-10-08 16:41:36] 2025-10-08 20:40:58,397 | INFO     | . Timing measurements:
[2025-10-08 16:41:36] 2025-10-08 20:40:58,397 | INFO     | . get job = 0 s
[2025-10-08 16:41:36] 2025-10-08 20:40:58,397 | INFO     | . initial setup = 2 s
[2025-10-08 16:41:36] 2025-10-08 20:40:58,397 | INFO     | . payload setup = 7 s
[2025-10-08 16:41:36] 2025-10-08 20:40:58,397 | INFO     | . stage-in = 0 s
[2025-10-08 16:41:36] 2025-10-08 20:40:58,397 | INFO     | . payload execution = 4917 s
[2025-10-08 16:41:36] 2025-10-08 20:40:58,397 | INFO     | . stage-out = 0 s
[2025-10-08 16:41:36] 2025-10-08 20:40:58,397 | INFO     | . log creation = 0 s
[2025-10-08 16:41:36] 2025-10-08 20:40:58,397 | INFO     | ..............................
[2025-10-08 16:41:36] 2025-10-08 20:40:58,673 | INFO     | 
[2025-10-08 16:41:36] 2025-10-08 20:40:58,673 | INFO     | job summary report
[2025-10-08 16:41:36] 2025-10-08 20:40:58,673 | INFO     | --------------------------------------------------
[2025-10-08 16:41:36] 2025-10-08 20:40:58,674 | INFO     | PanDA job id: 6826039397
[2025-10-08 16:41:36] 2025-10-08 20:40:58,674 | INFO     | task id: 46373048
[2025-10-08 16:41:36] 2025-10-08 20:40:58,674 | INFO     | errors: (none)
[2025-10-08 16:41:36] 2025-10-08 20:40:58,674 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-08 16:41:36] 2025-10-08 20:40:58,674 | INFO     | pilot state: finished 
[2025-10-08 16:41:36] 2025-10-08 20:40:58,674 | INFO     | transexitcode: 0
[2025-10-08 16:41:36] 2025-10-08 20:40:58,674 | INFO     | exeerrorcode: 0
[2025-10-08 16:41:36] 2025-10-08 20:40:58,674 | INFO     | exeerrordiag: 
[2025-10-08 16:41:36] 2025-10-08 20:40:58,674 | INFO     | exitcode: 0
[2025-10-08 16:41:36] 2025-10-08 20:40:58,674 | INFO     | exitmsg: OK
[2025-10-08 16:41:36] 2025-10-08 20:40:58,674 | INFO     | cpuconsumptiontime: 38913 s
[2025-10-08 16:41:36] 2025-10-08 20:40:58,674 | INFO     | nevents: 400
[2025-10-08 16:41:36] 2025-10-08 20:40:58,674 | INFO     | neventsw: 0
[2025-10-08 16:41:36] 2025-10-08 20:40:58,674 | INFO     | pid: 824270
[2025-10-08 16:41:36] 2025-10-08 20:40:58,674 | INFO     | pgrp: 824270
[2025-10-08 16:41:36] 2025-10-08 20:40:58,674 | INFO     | corecount: 11
[2025-10-08 16:41:36] 2025-10-08 20:40:58,675 | INFO     | event service: False
[2025-10-08 16:41:36] 2025-10-08 20:40:58,675 | INFO     | sizes: {0: 2348670, 1: 2348869, 7: 2349131, 11: 2349159, 4928: 2375434, 4929: 2375433, 4931: 2384615, 4933: 2384699, 4939: 2384893}
[2025-10-08 16:41:36] 2025-10-08 20:40:58,675 | INFO     | --------------------------------------------------
[2025-10-08 16:41:36] 2025-10-08 20:40:58,675 | INFO     | 
[2025-10-08 16:41:36] 2025-10-08 20:40:58,675 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-08 16:41:36] 2025-10-08 20:40:58,700 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-08 16:41:36] 2025-10-08 20:40:58,700 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-08 16:41:36] 2025-10-08 20:40:58,700 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-08 16:41:36] 2025-10-08 20:40:58,700 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-08 16:41:36] 2025-10-08 20:40:58,700 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-08 16:41:36] 2025-10-08 20:40:58,701 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-08 16:41:36] 2025-10-08 20:40:58,701 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-08 16:41:36] 2025-10-08 20:40:58,701 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-08 16:41:36] 2025-10-08 20:40:58,701 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-08 16:41:36] 2025-10-08 20:40:58,701 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-08 16:41:36] 2025-10-08 20:40:58,701 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-08 16:41:36] 2025-10-08 20:40:58,701 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-08 16:41:36] 2025-10-08 20:40:58,701 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-08 16:41:36] 2025-10-08 20:40:58,701 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-08 16:41:36] 2025-10-08 20:40:58,701 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-08 16:41:36] 2025-10-08 20:40:58,701 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-08 16:41:36] 2025-10-08 20:40:58,701 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-08 16:41:36] 2025-10-08 20:40:58,701 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-08 16:41:36] 2025-10-08 20:40:58,701 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-08 16:41:36] 2025-10-08 20:40:58,702 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-08 16:41:36] 2025-10-08 20:40:58,702 | INFO     | job 6826039397 has completed (purged errors)
[2025-10-08 16:41:36] 2025-10-08 20:40:58,702 | INFO     | overall cleanup function is called
[2025-10-08 16:41:36] 2025-10-08 20:40:59,706 | INFO     | --- collectZombieJob: --- 10, [824270]
[2025-10-08 16:41:36] 2025-10-08 20:40:59,706 | INFO     | zombie collector waiting for pid 824270
[2025-10-08 16:41:36] 2025-10-08 20:40:59,706 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-08 16:41:36] 2025-10-08 20:40:59,707 | INFO     | collected zombie processes
[2025-10-08 16:41:36] 2025-10-08 20:40:59,707 | INFO     | will attempt to kill all subprocesses of pid=824270
[2025-10-08 16:41:36] 2025-10-08 20:40:59,926 | INFO     | process IDs to be killed: [824270] (in reverse order)
[2025-10-08 16:41:36] 2025-10-08 20:41:00,010 | WARNING  | found no corresponding commands to process id(s)
[2025-10-08 16:41:36] 2025-10-08 20:41:00,010 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-08 16:41:36] 2025-10-08 20:41:00,021 | INFO     | did not find any defunct processes belonging to 824270
[2025-10-08 16:41:36] 2025-10-08 20:41:00,032 | INFO     | did not find any defunct processes belonging to 824270
[2025-10-08 16:41:36] 2025-10-08 20:41:00,033 | INFO     | ready for new job
[2025-10-08 16:41:36] 2025-10-08 20:41:00,033 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-08 16:41:36] 2025-10-08 20:41:00,035 | INFO     | ***************************************
[2025-10-08 16:41:36] 2025-10-08 20:41:00,035 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-08 16:41:36] 2025-10-08 20:41:00,035 | INFO     | ***************************************
[2025-10-08 16:41:36] 2025-10-08 20:41:00,035 | INFO     | 
[2025-10-08 16:41:36] 2025-10-08 20:41:00,039 | INFO     | architecture information:
[2025-10-08 16:41:36] 2025-10-08 20:41:00,039 | INFO     | executing command: cat /etc/os-release
[2025-10-08 16:41:36] 2025-10-08 20:41:00,056 | INFO     | cat /etc/os-release:
[2025-10-08 16:41:36] NAME="CentOS Linux"
[2025-10-08 16:41:36] VERSION="7 (Core)"
[2025-10-08 16:41:36] ID="centos"
[2025-10-08 16:41:36] ID_LIKE="rhel fedora"
[2025-10-08 16:41:36] VERSION_ID="7"
[2025-10-08 16:41:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-08 16:41:36] ANSI_COLOR="0;31"
[2025-10-08 16:41:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-08 16:41:36] HOME_URL="https://www.centos.org/"
[2025-10-08 16:41:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-08 16:41:36] 
[2025-10-08 16:41:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-08 16:41:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-08 16:41:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-08 16:41:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-08 16:41:36] 
[2025-10-08 16:41:36] 2025-10-08 20:41:00,057 | INFO     | ***************************************
[2025-10-08 16:41:36] 2025-10-08 20:41:00,558 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-08 16:41:36] 2025-10-08 20:41:00,574 | INFO     | sufficient remaining disk space (86486548480 B)
[2025-10-08 16:41:36] 2025-10-08 20:41:00,575 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-08 16:41:36] 2025-10-08 20:41:00,575 | INFO     | current server update state: UPDATING_FINAL
[2025-10-08 16:41:36] 2025-10-08 20:41:00,575 | INFO     | update_server=False
[2025-10-08 16:41:36] 2025-10-08 20:41:00,575 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-08 16:41:36] 2025-10-08 20:41:00,575 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-08 16:41:36] 2025-10-08 20:41:00,576 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-08 16:41:36] 2025-10-08 20:41:00,576 | INFO     | aborting loop
[2025-10-08 16:41:36] 2025-10-08 20:41:00,750 | INFO     | all data control threads have been joined
[2025-10-08 16:41:36] 2025-10-08 20:41:01,200 | INFO     | all payload control threads have been joined
[2025-10-08 16:41:36] 2025-10-08 20:41:01,210 | INFO     | all job control threads have been joined
[2025-10-08 16:41:36] 2025-10-08 20:41:01,576 | INFO     | [job] retrieve thread has finished
[2025-10-08 16:41:36] 2025-10-08 20:41:01,582 | INFO     | [job] job monitor thread has finished
[2025-10-08 16:41:36] 2025-10-08 20:41:01,755 | INFO     | [data] control thread has finished
[2025-10-08 16:41:36] 2025-10-08 20:41:01,831 | INFO     | [payload] execute_payloads thread has finished
[2025-10-08 16:41:36] 2025-10-08 20:41:01,949 | INFO     | [payload] validate_pre thread has finished
[2025-10-08 16:41:36] 2025-10-08 20:41:02,206 | INFO     | [payload] control thread has finished
[2025-10-08 16:41:36] 2025-10-08 20:41:02,216 | INFO     | [job] control thread has finished
[2025-10-08 16:41:36] 2025-10-08 20:41:02,404 | INFO     | [job] create_data_payload thread has finished
[2025-10-08 16:41:36] 2025-10-08 20:41:02,405 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-08 16:41:36] 2025-10-08 20:41:02,581 | INFO     | [data] copytool_out thread has finished
[2025-10-08 16:41:36] 2025-10-08 20:41:02,676 | INFO     | [job] validate thread has finished
[2025-10-08 16:41:36] 2025-10-08 20:41:02,680 | INFO     | [data] copytool_in thread has finished
[2025-10-08 16:41:36] 2025-10-08 20:41:02,722 | INFO     | [payload] failed_post thread has finished
[2025-10-08 16:41:36] 2025-10-08 20:41:03,027 | INFO     | [payload] validate_post thread has finished
[2025-10-08 16:41:36] 2025-10-08 20:41:03,484 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-08 16:41:36] 2025-10-08 20:41:04,489 | INFO     | [job] queue monitor thread has finished
[2025-10-08 16:41:36] 2025-10-08 20:41:06,408 | INFO     | [data] queue_monitor thread has finished
[2025-10-08 16:41:36] 2025-10-08 20:41:11,448 | INFO     | job.realtimelogging is not enabled
[2025-10-08 16:41:36] 2025-10-08 20:41:12,453 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-08 16:41:36] 2025-10-08 20:41:30,339 | INFO     | PID=817538 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-08 16:41:36] 2025-10-08 20:41:30,339 | INFO     | .. there are 9 such processes running
[2025-10-08 16:41:36] 2025-10-08 20:41:30,339 | INFO     | found 0 job(s) in 20 queues
[2025-10-08 16:41:36] 2025-10-08 20:41:30,339 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-08 16:41:36] 2025-10-08 20:41:30,339 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-08 16:41:36] 2025-10-08 20:41:30,803 | INFO     | [monitor] cgroup control has ended
[2025-10-08 16:41:36] 2025-10-08 20:41:31,228 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140680425101120)>', '<ExcThread(monitor, started 140680068310784)>']
[2025-10-08 16:41:36] 2025-10-08 20:41:31,344 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-08 16:41:36] 2025-10-08 20:41:31,344 | INFO     | [monitor] control thread has ended
[2025-10-08 16:41:36] 2025-10-08 20:41:36,253 | INFO     | all workflow threads have been joined
[2025-10-08 16:41:36] 2025-10-08 20:41:36,253 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-08 16:41:36] 2025-10-08 20:41:36,253 | INFO     | traces error code: 0
[2025-10-08 16:41:36] 2025-10-08 20:41:36,254 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-08 16:41:36] 2025-10-08 20:41:36,470 [wrapper] ==== pilot stdout END ====
[2025-10-08 16:41:36] 2025-10-08 20:41:36,475 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-08 16:41:36] 2025-10-08 20:41:36,479 [wrapper] pilotpid: 817538
[2025-10-08 16:41:36] 2025-10-08 20:41:36,484 [wrapper] Pilot exit status: 0
[2025-10-08 16:41:36] 2025-10-08 20:41:36,503 [wrapper] pandaids: 6826039397
[2025-10-08 16:41:36] 2025-10-08 20:41:36,574 [wrapper] cleanup supervisor_pilot  944366 817539
[2025-10-08 16:41:36] 2025-10-08 20:41:36,578 [wrapper] Test setup, not cleaning
[2025-10-08 16:41:36] 2025-10-08 20:41:36,581 [wrapper] apfmon messages muted
[2025-10-08 16:41:36] 2025-10-08 20:41:36,585 [wrapper] ==== wrapper stdout END ====
[2025-10-08 16:41:36] 2025-10-08 20:41:36,590 [wrapper] ==== wrapper stderr END ====
[2025-10-08 16:41:36]  *** Error codes and diagnostics ***
[2025-10-08 16:41:36]     "exeErrorCode": 0,
[2025-10-08 16:41:36]     "exeErrorDiag": "",
[2025-10-08 16:41:36]     "pilotErrorCode": 0,
[2025-10-08 16:41:36]     "pilotErrorDiag": "",
[2025-10-08 16:41:36]  *** Listing of results directory ***
[2025-10-08 16:41:36] total 405908
[2025-10-08 16:41:36] -rw-r--r--. 1 boincer umatlas    552446 Sep 30 09:06 pilot3.tar.gz
[2025-10-08 16:41:36] -rw-r--r--. 1 boincer umatlas      5112 Sep 30 09:15 queuedata.json
[2025-10-08 16:41:36] -rwx------. 1 boincer umatlas     36292 Sep 30 09:16 runpilot2-wrapper.sh
[2025-10-08 16:41:36] -rw-r--r--. 1 boincer umatlas       100 Oct  8 15:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-08 16:41:36] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  8 15:18 run_atlas
[2025-10-08 16:41:36] -rw-r--r--. 1 boincer umatlas       105 Oct  8 15:18 job.xml
[2025-10-08 16:41:36] -rw-r--r--. 2 boincer umatlas 219350527 Oct  8 15:18 EVNT.46373045._001908.pool.root.1
[2025-10-08 16:41:36] -rw-r--r--. 2 boincer umatlas     15120 Oct  8 15:18 start_atlas.sh
[2025-10-08 16:41:36] drwxrwx--x. 2 boincer umatlas      4096 Oct  8 15:18 shared
[2025-10-08 16:41:36] -rw-r--r--. 2 boincer umatlas    565611 Oct  8 15:18 input.tar.gz
[2025-10-08 16:41:36] -rw-r--r--. 1 boincer umatlas         0 Oct  8 15:18 boinc_lockfile
[2025-10-08 16:41:36] -rw-r--r--. 1 boincer umatlas      2538 Oct  8 15:18 pandaJob.out
[2025-10-08 16:41:36] -rw-------. 1 boincer umatlas    979287 Oct  8 15:18 agis_schedconf.cvmfs.json
[2025-10-08 16:41:36] -rw-------. 1 boincer umatlas   1560401 Oct  8 15:18 agis_ddmendpoints.agis.ALL.json
[2025-10-08 16:41:36] drwx------. 4 boincer umatlas      4096 Oct  8 15:18 pilot3
[2025-10-08 16:41:36] -rw-------. 1 boincer umatlas 190188167 Oct  8 16:40 HITS.46373048._060489.pool.root.1
[2025-10-08 16:41:36] -rw-r--r--. 1 boincer umatlas       529 Oct  8 16:40 boinc_task_state.xml
[2025-10-08 16:41:36] -rw-------. 1 boincer umatlas      1036 Oct  8 16:40 memory_monitor_summary.json
[2025-10-08 16:41:36] -rw-------. 1 boincer umatlas    386010 Oct  8 16:40 log.46373048._060489.job.log.tgz.1
[2025-10-08 16:41:36] -rw-r--r--. 1 boincer umatlas      6900 Oct  8 16:40 init_data.xml
[2025-10-08 16:41:36] -rw-------. 1 boincer umatlas        95 Oct  8 16:40 pilot_heartbeat.json
[2025-10-08 16:41:36] -rw-------. 1 boincer umatlas      7778 Oct  8 16:40 heartbeat.json
[2025-10-08 16:41:36] -rw-r--r--. 1 boincer umatlas        27 Oct  8 16:41 wrapper_checkpoint.txt
[2025-10-08 16:41:36] -rw-r--r--. 1 boincer umatlas      8192 Oct  8 16:41 boinc_mmap_file
[2025-10-08 16:41:36] -rw-------. 1 boincer umatlas      4894 Oct  8 16:41 pilotlog.txt
[2025-10-08 16:41:36] -rw-------. 1 boincer umatlas    722348 Oct  8 16:41 log.46373048._060489.job.log.1
[2025-10-08 16:41:36] -rw-------. 1 boincer umatlas       357 Oct  8 16:41 output.list
[2025-10-08 16:41:36] -rw-r--r--. 1 boincer umatlas       620 Oct  8 16:41 runtime_log
[2025-10-08 16:41:36] -rw-------. 1 boincer umatlas   1126400 Oct  8 16:41 result.tar.gz
[2025-10-08 16:41:36] -rw-------. 1 boincer umatlas       652 Oct  8 16:41 ZBJODmPOpN8n9Rq4apOajLDm4fhM0noT9bVof3QYDmoA6LDmS1EIIo.diag
[2025-10-08 16:41:36] -rw-r--r--. 1 boincer umatlas      8705 Oct  8 16:41 runtime_log.err
[2025-10-08 16:41:36] -rw-r--r--. 1 boincer umatlas     22416 Oct  8 16:41 stderr.txt
[2025-10-08 16:41:36] HITS file was successfully produced:
[2025-10-08 16:41:36] -rw-------. 1 boincer umatlas 190188167 Oct  8 16:40 shared/HITS.pool.root.1
[2025-10-08 16:41:36]  *** Contents of shared directory: ***
[2025-10-08 16:41:36] total 401624
[2025-10-08 16:41:36] -rw-r--r--. 2 boincer umatlas 219350527 Oct  8 15:18 ATLAS.root_0
[2025-10-08 16:41:36] -rw-r--r--. 2 boincer umatlas     15120 Oct  8 15:18 start_atlas.sh
[2025-10-08 16:41:36] -rw-r--r--. 2 boincer umatlas    565611 Oct  8 15:18 input.tar.gz
[2025-10-08 16:41:36] -rw-------. 1 boincer umatlas 190188167 Oct  8 16:40 HITS.pool.root.1
[2025-10-08 16:41:36] -rw-------. 1 boincer umatlas   1126400 Oct  8 16:41 result.tar.gz
16:41:38 (813887): run_atlas exited; CPU time 38938.121667
16:41:38 (813887): called boinc_finish(0)

</stderr_txt>
]]>

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