Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-09 13:02:05 (13008): vboxwrapper version 26210
2025-10-09 13:02:05 (13008): BOINC client version: 8.0.2
2025-10-09 13:02:06 (13008): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2025-10-09 13:02:06 (13008): Successfully copied 'init_data.xml' to the shared directory.
2025-10-09 13:02:07 (13008): Create VM. (boinc_792c52623c5154be, slot#0)
2025-10-09 13:02:08 (13008): Setting Memory Size for VM. (4400MB)
2025-10-09 13:02:08 (13008): Setting CPU Count for VM. (4)
2025-10-09 13:02:08 (13008): Setting Chipset Options for VM.
2025-10-09 13:02:09 (13008): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-09 13:02:09 (13008): Setting Boot Options for VM.
2025-10-09 13:02:10 (13008): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-09 13:02:10 (13008): Enabling VM Network Access.
2025-10-09 13:02:11 (13008): Disabling USB Support for VM.
2025-10-09 13:02:11 (13008): Disabling COM Port Support for VM.
2025-10-09 13:02:11 (13008): Disabling LPT Port Support for VM.
2025-10-09 13:02:12 (13008): Disabling Audio Support for VM.
2025-10-09 13:02:12 (13008): Disabling Clipboard Support for VM.
2025-10-09 13:02:12 (13008): Disabling Drag and Drop Support for VM.
2025-10-09 13:02:13 (13008): Adding storage controller(s) to VM.
2025-10-09 13:02:13 (13008): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-09 13:02:16 (13008): Adding VirtualBox Guest Additions to VM.
2025-10-09 13:02:16 (13008): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-09 13:02:17 (13008): forwarding host port 63530 to guest port 80
2025-10-09 13:02:17 (13008): Enabling remote desktop for VM.
2025-10-09 13:02:17 (13008): Required extension pack not installed, remote desktop not enabled.
2025-10-09 13:02:17 (13008): Enabling shared directory for VM.
2025-10-09 13:02:18 (13008): Starting VM using VBoxManage interface. (boinc_792c52623c5154be, slot#0)
2025-10-09 13:02:31 (13008): Successfully started VM. (PID = '28204')
2025-10-09 13:02:31 (13008): Reporting VM Process ID to BOINC.
2025-10-09 13:02:31 (13008): Guest Log: BIOS: VirtualBox 7.1.4
2025-10-09 13:02:31 (13008): Guest Log: CPUID EDX: 0x178bfbff
2025-10-09 13:02:31 (13008): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-09 13:02:31 (13008): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-09 13:02:31 (13008): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-09 13:02:31 (13008): Detected: Web Application Enabled (http://localhost:63530)
2025-10-09 13:02:31 (13008): Preference change detected
2025-10-09 13:02:31 (13008): Setting CPU throttle for VM. (100%)
2025-10-09 13:02:31 (13008): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-09 13:02:33 (13008): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-09 13:02:33 (13008): Guest Log: BIOS: Booting from Hard Disk...
2025-10-09 13:02:40 (13008): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-09 13:02:40 (13008): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-09 13:02:40 (13008): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-09 13:02:40 (13008): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-09 13:02:40 (13008): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-09 13:02:40 (13008): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-09 13:02:40 (13008): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-09 13:02:40 (13008): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-09 13:02:40 (13008): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-09 13:02:40 (13008): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-09 13:02:40 (13008): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-09 13:02:40 (13008): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-09 13:02:40 (13008): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-09 13:02:40 (13008): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-09 13:02:40 (13008): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-09 13:02:40 (13008): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-09 13:02:40 (13008): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-09 13:02:40 (13008): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-09 13:02:40 (13008): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-09 13:02:40 (13008): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-09 13:02:40 (13008): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-09 13:02:40 (13008): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-09 13:02:40 (13008): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-09 13:02:40 (13008): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-09 13:02:40 (13008): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-09 13:02:40 (13008): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-09 13:02:40 (13008): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-09 13:02:40 (13008): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-09 13:02:40 (13008): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-09 13:02:40 (13008): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-09 13:02:40 (13008): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-09 13:02:40 (13008): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-09 13:02:55 (13008): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-09 13:02:55 (13008): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-09 13:03:42 (13008): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-09 13:03:42 (13008): Guest Log: 00:00:00.001281 main     Log opened 2025-10-09T13:03:40.242027000Z
2025-10-09 13:03:42 (13008): Guest Log: 00:00:00.002011 main     OS Product: Linux
2025-10-09 13:03:42 (13008): Guest Log: 00:00:00.002255 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-09 13:03:42 (13008): Guest Log: 00:00:00.002892 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-09 13:03:42 (13008): Guest Log: 00:00:00.003218 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-09 13:03:42 (13008): Guest Log: 00:00:00.003227 main     Process ID: 1335
2025-10-09 13:03:42 (13008): Guest Log: 00:00:00.003234 main     Package type: LINUX_64BITS_GENERIC
2025-10-09 13:03:42 (13008): Guest Log: 00:00:00.010982 main     5.2.32 r132073 started. Verbose level = 0
2025-10-09 13:03:43 (13008): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-09 13:03:43 (13008): Guest Log: [INFO] Mounting shared directory
2025-10-09 13:03:43 (13008): Guest Log: [INFO] Checking for init_data.xml
2025-10-09 13:03:51 (13008): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-09 13:03:51 (13008): Guest Log: [INFO] Detected branch: prod
2025-10-09 13:03:52 (13008): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-09 13:03:52 (13008): Guest Log: Copying input files
2025-10-09 13:03:52 (13008): Guest Log: 00:00:10.034294 timesync vgsvcTimeSyncWorker: Radical guest time change: -10 788 361 608 000ns (GuestNow=1 760 004 231 908 235 000 ns GuestLast=1 760 015 020 269 843 000 ns fSetTimeLastLoop=true )
2025-10-09 13:04:12 (13008): Guest Log: Copied input files into RunAtlas.
2025-10-09 13:04:13 (13008): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-09 13:04:13 (13008): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-09 13:04:13 (13008): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-09 13:04:13 (13008): Guest Log: Further information can be found at the LHC@home message board.
2025-10-09 13:04:23 (13008): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-09 13:04:25 (13008): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-09 13:04:25 (13008): Guest Log: 2.6.3.0 1612 0 30168 151507 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
2025-10-09 13:04:33 (13008): Guest Log: copied the webapp to /var/www
2025-10-09 13:04:33 (13008): Guest Log: ATHENA_PROC_NUMBER=4
2025-10-09 13:04:33 (13008): Guest Log: ATHENA_CORE_NUMBER=4
2025-10-09 13:04:34 (13008): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-09 13:04:34 (13008): Guest Log:  *** Starting ATLAS job. (PandaID=6836333142 taskID=46676269) ***
2025-10-09 14:44:22 (13008): Status Report: Elapsed Time: '6008.476854'
2025-10-09 14:44:23 (13008): Status Report: CPU Time: '19727.328125'
2025-10-09 16:26:19 (13008): Status Report: Elapsed Time: '12009.146791'
2025-10-09 16:26:20 (13008): Status Report: CPU Time: '42984.062500'
2025-10-09 18:11:12 (13008): Status Report: Elapsed Time: '18009.220093'
2025-10-09 18:11:12 (13008): Status Report: CPU Time: '66806.296875'
2025-10-09 19:53:00 (13008): Status Report: Elapsed Time: '24009.589314'
2025-10-09 19:53:00 (13008): Status Report: CPU Time: '90023.421875'
2025-10-09 21:34:12 (13008): Status Report: Elapsed Time: '30010.569778'
2025-10-09 21:34:12 (13008): Status Report: CPU Time: '113114.468750'
2025-10-09 23:16:21 (13008): Status Report: Elapsed Time: '36011.065891'
2025-10-09 23:16:21 (13008): Status Report: CPU Time: '136207.156250'
2025-10-10 00:58:12 (13008): Status Report: Elapsed Time: '42011.759172'
2025-10-10 00:58:12 (13008): Status Report: CPU Time: '159413.375000'
2025-10-10 01:23:08 (13008): Guest Log:  *** Job finished ***
2025-10-10 01:23:08 (13008): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-10 01:23:08 (13008): Guest Log: 2025-10-09 22:23:01,652 | INFO     | PID=6015 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-10-10 01:23:08 (13008): Guest Log: 2025-10-09 22:23:01,653 | INFO     | found 0 job(s) in 20 queues
2025-10-10 01:23:08 (13008): Guest Log: 2025-10-09 22:23:01,653 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-10 01:23:08 (13008): Guest Log: 2025-10-09 22:23:01,653 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-10 01:23:08 (13008): Guest Log: 2025-10-09 22:23:01,654 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-10 01:23:08 (13008): Guest Log: 2025-10-09 22:23:01,654 | INFO     | [monitor] control thread has ended
2025-10-10 01:23:08 (13008): Guest Log: 2025-10-09 22:23:03,238 | INFO     | all workflow threads have been joined
2025-10-10 01:23:08 (13008): Guest Log: 2025-10-09 22:23:03,239 | INFO     | end of generic workflow (traces error code: 0)
2025-10-10 01:23:08 (13008): Guest Log: 2025-10-09 22:23:03,241 | INFO     | traces error code: 0
2025-10-10 01:23:08 (13008): Guest Log: 2025-10-09 22:23:03,242 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-10 01:23:08 (13008): Guest Log: 2025-10-09 22:23:03,622 [wrapper] ==== pilot stdout END ====
2025-10-10 01:23:08 (13008): Guest Log: 2025-10-09 22:23:03,633 [wrapper] ==== wrapper stdout RESUME ====
2025-10-10 01:23:08 (13008): Guest Log: 2025-10-09 22:23:03,642 [wrapper] pilotpid: 6015
2025-10-10 01:23:08 (13008): Guest Log: 2025-10-09 22:23:03,651 [wrapper] Pilot exit status: 0
2025-10-10 01:23:08 (13008): Guest Log: 2025-10-09 22:23:03,752 [wrapper] pandaids: 6836333142
2025-10-10 01:23:08 (13008): Guest Log: 2025-10-09 22:23:03,822 [wrapper] cleanup supervisor_pilot 24646 6016
2025-10-10 01:23:08 (13008): Guest Log: 2025-10-09 22:23:03,836 [wrapper] Test setup, not cleaning
2025-10-10 01:23:08 (13008): Guest Log: 2025-10-09 22:23:03,846 [wrapper] apfmon messages muted
2025-10-10 01:23:08 (13008): Guest Log: 2025-10-09 22:23:03,854 [wrapper] ==== wrapper stdout END ====
2025-10-10 01:23:08 (13008): Guest Log: 2025-10-09 22:23:03,864 [wrapper] ==== wrapper stderr END ====
2025-10-10 01:23:08 (13008): Guest Log:  *** Error codes and diagnostics ***
2025-10-10 01:23:08 (13008): Guest Log:     "exeErrorCode": 0,
2025-10-10 01:23:08 (13008): Guest Log:     "exeErrorDiag": "",
2025-10-10 01:23:08 (13008): Guest Log:     "pilotErrorCode": 0,
2025-10-10 01:23:08 (13008): Guest Log:     "pilotErrorDiag": "",
2025-10-10 01:23:08 (13008): Guest Log:  *** Listing of results directory ***
2025-10-10 01:23:08 (13008): Guest Log: total 197260
2025-10-10 01:23:08 (13008): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct  8 18:44 pilot3.tar.gz
2025-10-10 01:23:08 (13008): Guest Log: -rwx------. 1 atlas atlas     36292 Oct  8 18:48 runpilot2-wrapper.sh
2025-10-10 01:23:08 (13008): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct  8 18:49 queuedata.json
2025-10-10 01:23:08 (13008): Guest Log: -rwxr-xr-x. 1 atlas atlas      8220 Oct  9 10:03 init_data.xml
2025-10-10 01:23:08 (13008): Guest Log: -rwxr-xr-x. 1 atlas atlas    569680 Oct  9 10:03 input.tar.gz
2025-10-10 01:23:08 (13008): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct  9 10:03 start_atlas.sh
2025-10-10 01:23:08 (13008): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct  9 10:04 EVNT.46676267._000277.pool.root.1 -> /data/./ATLAS.root_0
2025-10-10 01:23:08 (13008): Guest Log: -rw-r--r--. 1 atlas atlas      2548 Oct  9 10:04 pandaJob.out
2025-10-10 01:23:08 (13008): Guest Log: -rw-------. 1 atlas atlas    979306 Oct  9 10:06 agis_schedconf.cvmfs.json
2025-10-10 01:23:08 (13008): Guest Log: drwx------. 5 atlas atlas      4096 Oct  9 10:06 pilot3
2025-10-10 01:23:08 (13008): Guest Log: -rw-------. 1 atlas atlas 185186538 Oct  9 22:20 HITS.46676269._006928.pool.root.1
2025-10-10 01:23:08 (13008): Guest Log: -rw-------. 1 atlas atlas      1029 Oct  9 22:21 memory_monitor_summary.json
2025-10-10 01:23:08 (13008): Guest Log: -rw-------. 1 atlas atlas   1560401 Oct  9 22:22 agis_ddmendpoints.agis.ALL.json
2025-10-10 01:23:08 (13008): Guest Log: -rw-------. 1 atlas atlas    800586 Oct  9 22:22 log.46676269._006928.job.log.tgz.1
2025-10-10 01:23:08 (13008): Guest Log: -rw-------. 1 atlas atlas        95 Oct  9 22:22 pilot_heartbeat.json
2025-10-10 01:23:08 (13008): Guest Log: -rw-------. 1 atlas atlas      7785 Oct  9 22:22 heartbeat.json
2025-10-10 01:23:08 (13008): Guest Log: -rw-------. 1 atlas atlas      4805 Oct  9 22:23 pilotlog.txt
2025-10-10 01:23:08 (13008): Guest Log: -rw-------. 1 atlas atlas   5685729 Oct  9 22:23 log.46676269._006928.job.log.1
2025-10-10 01:23:08 (13008): Guest Log: -rw-------. 1 atlas atlas       357 Oct  9 22:23 output.list
2025-10-10 01:23:08 (13008): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct  9 22:23 runtime_log
2025-10-10 01:23:08 (13008): Guest Log: -rw-------. 1 atlas atlas   6502400 Oct  9 22:23 result.tar.gz
2025-10-10 01:23:08 (13008): Guest Log: -rw-r--r--. 1 atlas atlas      8648 Oct  9 22:23 runtime_log.err
2025-10-10 01:23:08 (13008): Guest Log: -rw-------. 1 atlas atlas       667 Oct  9 22:23 4I6KDm8NoQ8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmjHYNDmGPbJ2n.diag
2025-10-10 01:23:08 (13008): Guest Log: Looking for outputfile HITS.46676269._006928.pool.root.1
2025-10-10 01:23:08 (13008): Guest Log: HITS file was successfully produced
2025-10-10 01:23:08 (13008): Guest Log: -rw-------. 1 atlas atlas 185186538 Oct  9 22:20 /home/atlas/RunAtlas/HITS.46676269._006928.pool.root.1
2025-10-10 01:23:12 (13008): Guest Log: Successfully finished the ATLAS job!
2025-10-10 01:23:12 (13008): Guest Log: Copying the results back to the shared directory!
2025-10-10 01:23:13 (13008): Guest Log:  *** Contents of shared directory: ***
2025-10-10 01:23:13 (13008): Guest Log: total 405688
2025-10-10 01:23:13 (13008): Guest Log: -rwxrwxrwx. 1 root root 223128663 Oct  9 10:01 ATLAS.root_0
2025-10-10 01:23:13 (13008): Guest Log: -rwxrwxrwx. 1 root root 185186538 Oct  9 22:23 HITS.pool.root.1
2025-10-10 01:23:13 (13008): Guest Log: -rwxrwxrwx. 1 root root      8220 Oct  9 10:01 init_data.xml
2025-10-10 01:23:13 (13008): Guest Log: -rwxrwxrwx. 1 root root    569680 Oct  8 18:59 input.tar.gz
2025-10-10 01:23:13 (13008): Guest Log: -rwxrwxrwx. 1 root root   6502400 Oct  9 22:23 result.tar.gz
2025-10-10 01:23:13 (13008): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct  8 18:59 start_atlas.sh
2025-10-10 01:23:13 (13008): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-10 01:23:13 (13008): VM Completion File Detected.
2025-10-10 01:23:13 (13008): Powering off VM.
2025-10-10 01:23:43 (13008): Successfully stopped VM.
2025-10-10 01:23:43 (13008): Deregistering VM. (boinc_792c52623c5154be, slot#0)
2025-10-10 01:23:44 (13008): Removing network bandwidth throttle group from VM.
2025-10-10 01:23:45 (13008): Removing VM from VirtualBox.
2025-10-10 01:23:51 (13008): called boinc_finish(0)

</stderr_txt>
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