Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-10 01:24:09 (27036): vboxwrapper version 26210
2025-10-10 01:24:09 (27036): BOINC client version: 8.0.2
2025-10-10 01:24:10 (27036): Detected: VirtualBox VboxManage Interface (Version: 7.1.4)
2025-10-10 01:24:10 (27036): Successfully copied 'init_data.xml' to the shared directory.
2025-10-10 01:24:11 (27036): Create VM. (boinc_7a373520ec31991d, slot#0)
2025-10-10 01:24:12 (27036): Setting Memory Size for VM. (4400MB)
2025-10-10 01:24:12 (27036): Setting CPU Count for VM. (4)
2025-10-10 01:24:12 (27036): Setting Chipset Options for VM.
2025-10-10 01:24:13 (27036): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-10 01:24:13 (27036): Setting Boot Options for VM.
2025-10-10 01:24:14 (27036): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-10 01:24:14 (27036): Enabling VM Network Access.
2025-10-10 01:24:14 (27036): Disabling USB Support for VM.
2025-10-10 01:24:15 (27036): Disabling COM Port Support for VM.
2025-10-10 01:24:15 (27036): Disabling LPT Port Support for VM.
2025-10-10 01:24:15 (27036): Disabling Audio Support for VM.
2025-10-10 01:24:15 (27036): Disabling Clipboard Support for VM.
2025-10-10 01:24:16 (27036): Disabling Drag and Drop Support for VM.
2025-10-10 01:24:16 (27036): Adding storage controller(s) to VM.
2025-10-10 01:24:16 (27036): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-10 01:24:19 (27036): Adding VirtualBox Guest Additions to VM.
2025-10-10 01:24:20 (27036): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-10 01:24:20 (27036): forwarding host port 55130 to guest port 80
2025-10-10 01:24:20 (27036): Enabling remote desktop for VM.
2025-10-10 01:24:20 (27036): Required extension pack not installed, remote desktop not enabled.
2025-10-10 01:24:20 (27036): Enabling shared directory for VM.
2025-10-10 01:24:21 (27036): Starting VM using VBoxManage interface. (boinc_7a373520ec31991d, slot#0)
2025-10-10 01:24:32 (27036): Successfully started VM. (PID = '19496')
2025-10-10 01:24:32 (27036): Reporting VM Process ID to BOINC.
2025-10-10 01:24:32 (27036): Guest Log: BIOS: VirtualBox 7.1.4
2025-10-10 01:24:32 (27036): Guest Log: CPUID EDX: 0x178bfbff
2025-10-10 01:24:32 (27036): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-10 01:24:32 (27036): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-10 01:24:32 (27036): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-10 01:24:32 (27036): Detected: Web Application Enabled (http://localhost:55130)
2025-10-10 01:24:32 (27036): Preference change detected
2025-10-10 01:24:32 (27036): Setting CPU throttle for VM. (100%)
2025-10-10 01:24:32 (27036): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 60 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-10 01:24:34 (27036): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-10 01:24:34 (27036): Guest Log: BIOS: Booting from Hard Disk...
2025-10-10 01:24:38 (27036): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-10 01:24:38 (27036): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-10 01:24:38 (27036): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-10 01:24:38 (27036): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-10 01:24:38 (27036): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-10 01:24:38 (27036): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-10 01:24:38 (27036): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-10 01:24:38 (27036): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-10 01:24:38 (27036): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-10 01:24:38 (27036): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-10 01:24:38 (27036): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-10 01:24:38 (27036): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-10 01:24:38 (27036): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-10 01:24:38 (27036): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-10 01:24:38 (27036): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-10 01:24:38 (27036): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-10 01:24:38 (27036): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-10 01:24:38 (27036): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-10 01:24:38 (27036): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-10 01:24:38 (27036): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-10 01:24:38 (27036): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-10 01:24:38 (27036): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-10 01:24:38 (27036): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-10 01:24:38 (27036): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-10 01:24:38 (27036): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-10 01:24:38 (27036): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-10 01:24:38 (27036): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-10 01:24:38 (27036): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-10 01:24:38 (27036): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-10 01:24:38 (27036): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-10 01:24:38 (27036): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-10 01:24:38 (27036): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-10 01:24:51 (27036): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-10 01:24:51 (27036): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-10 01:25:27 (27036): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-10 01:25:27 (27036): Guest Log: 00:00:00.000218 main     Log opened 2025-10-10T01:25:24.784810000Z
2025-10-10 01:25:27 (27036): Guest Log: 00:00:00.000444 main     OS Product: Linux
2025-10-10 01:25:27 (27036): Guest Log: 00:00:00.000524 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-10 01:25:27 (27036): Guest Log: 00:00:00.000624 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-10 01:25:27 (27036): Guest Log: 00:00:00.000702 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-10 01:25:27 (27036): Guest Log: 00:00:00.000705 main     Process ID: 1332
2025-10-10 01:25:27 (27036): Guest Log: 00:00:00.000707 main     Package type: LINUX_64BITS_GENERIC
2025-10-10 01:25:27 (27036): Guest Log: 00:00:00.003472 main     5.2.32 r132073 started. Verbose level = 0
2025-10-10 01:25:28 (27036): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-10 01:25:28 (27036): Guest Log: [INFO] Mounting shared directory
2025-10-10 01:25:28 (27036): Guest Log: [INFO] Checking for init_data.xml
2025-10-10 01:25:37 (27036): Guest Log: 00:00:10.017868 timesync vgsvcTimeSyncWorker: Radical guest time change: -10 787 903 934 000ns (GuestNow=1 760 048 736 887 201 000 ns GuestLast=1 760 059 524 791 135 000 ns fSetTimeLastLoop=true )
2025-10-10 01:25:59 (27036): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-10 01:25:59 (27036): Guest Log: [INFO] Detected branch: prod
2025-10-10 01:26:00 (27036): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-10 01:26:00 (27036): Guest Log: Copying input files
2025-10-10 01:26:03 (27036): Guest Log: Copied input files into RunAtlas.
2025-10-10 01:26:03 (27036): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-10 01:26:03 (27036): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-10 01:26:03 (27036): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-10 01:26:03 (27036): Guest Log: Further information can be found at the LHC@home message board.
2025-10-10 01:26:19 (27036): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-10 01:26:19 (27036): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-10 01:26:19 (27036): Guest Log: 2.6.3.0 1612 0 32208 151526 3 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-10 01:26:25 (27036): Guest Log: copied the webapp to /var/www
2025-10-10 01:26:25 (27036): Guest Log: ATHENA_PROC_NUMBER=4
2025-10-10 01:26:25 (27036): Guest Log: ATHENA_CORE_NUMBER=4
2025-10-10 01:26:25 (27036): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-10 01:26:26 (27036): Guest Log:  *** Starting ATLAS job. (PandaID=6836333145 taskID=46676269) ***
2025-10-10 03:07:02 (27036): Status Report: Elapsed Time: '6003.430386'
2025-10-10 03:07:02 (27036): Status Report: CPU Time: '19705.765625'
2025-10-10 04:49:28 (27036): Status Report: Elapsed Time: '12003.575912'
2025-10-10 04:49:28 (27036): Status Report: CPU Time: '43077.921875'
2025-10-10 06:32:40 (27036): Status Report: Elapsed Time: '18007.114790'
2025-10-10 06:32:42 (27036): Status Report: CPU Time: '66535.859375'
2025-10-10 08:15:58 (27036): Status Report: Elapsed Time: '24007.324360'
2025-10-10 08:15:58 (27036): Status Report: CPU Time: '89886.609375'
2025-10-10 09:57:31 (27036): Status Report: Elapsed Time: '30008.022299'
2025-10-10 09:57:32 (27036): Status Report: CPU Time: '113095.140625'
2025-10-10 11:39:36 (27036): Status Report: Elapsed Time: '36008.410467'
2025-10-10 11:39:37 (27036): Status Report: CPU Time: '136380.531250'
2025-10-10 13:21:35 (27036): Status Report: Elapsed Time: '42009.270132'
2025-10-10 13:21:37 (27036): Status Report: CPU Time: '159639.593750'
2025-10-10 14:09:56 (27036): Guest Log:  *** Job finished ***
2025-10-10 14:09:56 (27036): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-10 14:09:56 (27036): Guest Log: 2025-10-10 11:09:52,501 | INFO     | PID=6016 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-10-10 14:09:56 (27036): Guest Log: 2025-10-10 11:09:52,502 | INFO     | found 0 job(s) in 20 queues
2025-10-10 14:09:56 (27036): Guest Log: 2025-10-10 11:09:52,502 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-10 14:09:56 (27036): Guest Log: 2025-10-10 11:09:52,502 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-10 14:09:56 (27036): Guest Log: 2025-10-10 11:09:52,503 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-10 14:09:56 (27036): Guest Log: 2025-10-10 11:09:52,503 | INFO     | [monitor] control thread has ended
2025-10-10 14:09:56 (27036): Guest Log: 2025-10-10 11:09:52,580 | INFO     | all workflow threads have been joined
2025-10-10 14:09:56 (27036): Guest Log: 2025-10-10 11:09:52,581 | INFO     | end of generic workflow (traces error code: 0)
2025-10-10 14:09:56 (27036): Guest Log: 2025-10-10 11:09:52,583 | INFO     | traces error code: 0
2025-10-10 14:09:56 (27036): Guest Log: 2025-10-10 11:09:52,584 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-10 14:09:56 (27036): Guest Log: 2025-10-10 11:09:53,271 [wrapper] ==== pilot stdout END ====
2025-10-10 14:09:56 (27036): Guest Log: 2025-10-10 11:09:53,281 [wrapper] ==== wrapper stdout RESUME ====
2025-10-10 14:09:56 (27036): Guest Log: 2025-10-10 11:09:53,290 [wrapper] pilotpid: 6016
2025-10-10 14:09:56 (27036): Guest Log: 2025-10-10 11:09:53,299 [wrapper] Pilot exit status: 0
2025-10-10 14:09:56 (27036): Guest Log: 2025-10-10 11:09:53,425 [wrapper] pandaids: 6836333145
2025-10-10 14:09:56 (27036): Guest Log: 2025-10-10 11:09:53,491 [wrapper] cleanup supervisor_pilot 27224 6017
2025-10-10 14:09:56 (27036): Guest Log: 2025-10-10 11:09:53,500 [wrapper] Test setup, not cleaning
2025-10-10 14:09:56 (27036): Guest Log: 2025-10-10 11:09:53,511 [wrapper] apfmon messages muted
2025-10-10 14:09:56 (27036): Guest Log: 2025-10-10 11:09:53,521 [wrapper] ==== wrapper stdout END ====
2025-10-10 14:09:56 (27036): Guest Log: 2025-10-10 11:09:53,531 [wrapper] ==== wrapper stderr END ====
2025-10-10 14:09:56 (27036): Guest Log:  *** Error codes and diagnostics ***
2025-10-10 14:09:56 (27036): Guest Log:     "exeErrorCode": 0,
2025-10-10 14:09:56 (27036): Guest Log:     "exeErrorDiag": "",
2025-10-10 14:09:56 (27036): Guest Log:     "pilotErrorCode": 0,
2025-10-10 14:09:56 (27036): Guest Log:     "pilotErrorDiag": "",
2025-10-10 14:09:56 (27036): Guest Log:  *** Listing of results directory ***
2025-10-10 14:09:56 (27036): Guest Log: total 207264
2025-10-10 14:09:56 (27036): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct  8 18:44 pilot3.tar.gz
2025-10-10 14:09:56 (27036): Guest Log: -rwx------. 1 atlas atlas     36292 Oct  8 18:48 runpilot2-wrapper.sh
2025-10-10 14:09:56 (27036): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct  8 18:49 queuedata.json
2025-10-10 14:09:56 (27036): Guest Log: -rwxr-xr-x. 1 atlas atlas      8220 Oct  9 22:26 init_data.xml
2025-10-10 14:09:56 (27036): Guest Log: -rwxr-xr-x. 1 atlas atlas    569686 Oct  9 22:26 input.tar.gz
2025-10-10 14:09:56 (27036): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct  9 22:26 start_atlas.sh
2025-10-10 14:09:56 (27036): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct  9 22:26 EVNT.46676267._000277.pool.root.1 -> /data/./ATLAS.root_0
2025-10-10 14:09:56 (27036): Guest Log: -rw-r--r--. 1 atlas atlas      2548 Oct  9 22:26 pandaJob.out
2025-10-10 14:09:56 (27036): Guest Log: -rw-------. 1 atlas atlas    975454 Oct  9 22:27 agis_schedconf.cvmfs.json
2025-10-10 14:09:56 (27036): Guest Log: drwx------. 5 atlas atlas      4096 Oct  9 22:27 pilot3
2025-10-10 14:09:56 (27036): Guest Log: -rw-------. 1 atlas atlas 195125526 Oct 10 11:07 HITS.46676269._006931.pool.root.1
2025-10-10 14:09:56 (27036): Guest Log: -rw-------. 1 atlas atlas      1032 Oct 10 11:08 memory_monitor_summary.json
2025-10-10 14:09:56 (27036): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 10 11:08 agis_ddmendpoints.agis.ALL.json
2025-10-10 14:09:56 (27036): Guest Log: -rw-------. 1 atlas atlas    807166 Oct 10 11:08 log.46676269._006931.job.log.tgz.1
2025-10-10 14:09:56 (27036): Guest Log: -rw-------. 1 atlas atlas      7789 Oct 10 11:09 heartbeat.json
2025-10-10 14:09:56 (27036): Guest Log: -rw-------. 1 atlas atlas        95 Oct 10 11:09 pilot_heartbeat.json
2025-10-10 14:09:56 (27036): Guest Log: -rw-------. 1 atlas atlas      4991 Oct 10 11:09 pilotlog.txt
2025-10-10 14:09:56 (27036): Guest Log: -rw-------. 1 atlas atlas   5829343 Oct 10 11:09 log.46676269._006931.job.log.1
2025-10-10 14:09:56 (27036): Guest Log: -rw-------. 1 atlas atlas       357 Oct 10 11:09 output.list
2025-10-10 14:09:56 (27036): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 10 11:09 runtime_log
2025-10-10 14:09:56 (27036): Guest Log: -rw-------. 1 atlas atlas   6656000 Oct 10 11:09 result.tar.gz
2025-10-10 14:09:56 (27036): Guest Log: -rw-r--r--. 1 atlas atlas      8648 Oct 10 11:09 runtime_log.err
2025-10-10 14:09:56 (27036): Guest Log: -rw-------. 1 atlas atlas       667 Oct 10 11:09 h27KDm8NoQ8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmkHYNDmVuNvzn.diag
2025-10-10 14:09:56 (27036): Guest Log: Looking for outputfile HITS.46676269._006931.pool.root.1
2025-10-10 14:09:56 (27036): Guest Log: HITS file was successfully produced
2025-10-10 14:09:56 (27036): Guest Log: -rw-------. 1 atlas atlas 195125526 Oct 10 11:07 /home/atlas/RunAtlas/HITS.46676269._006931.pool.root.1
2025-10-10 14:10:00 (27036): Guest Log: Successfully finished the ATLAS job!
2025-10-10 14:10:00 (27036): Guest Log: Copying the results back to the shared directory!
2025-10-10 14:10:01 (27036): Guest Log:  *** Contents of shared directory: ***
2025-10-10 14:10:01 (27036): Guest Log: total 415544
2025-10-10 14:10:01 (27036): Guest Log: -rwxrwxrwx. 1 root root 223128663 Oct  9 22:24 ATLAS.root_0
2025-10-10 14:10:01 (27036): Guest Log: -rwxrwxrwx. 1 root root 195125526 Oct 10 11:09 HITS.pool.root.1
2025-10-10 14:10:01 (27036): Guest Log: -rwxrwxrwx. 1 root root      8220 Oct  9 22:24 init_data.xml
2025-10-10 14:10:01 (27036): Guest Log: -rwxrwxrwx. 1 root root    569686 Oct  8 19:09 input.tar.gz
2025-10-10 14:10:01 (27036): Guest Log: -rwxrwxrwx. 1 root root   6656000 Oct 10 11:10 result.tar.gz
2025-10-10 14:10:01 (27036): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct  8 19:09 start_atlas.sh
2025-10-10 14:10:01 (27036): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-10 14:10:01 (27036): VM Completion File Detected.
2025-10-10 14:10:01 (27036): Powering off VM.
2025-10-10 14:10:10 (27036): Successfully stopped VM.
2025-10-10 14:10:10 (27036): Deregistering VM. (boinc_7a373520ec31991d, slot#0)
2025-10-10 14:10:11 (27036): Removing network bandwidth throttle group from VM.
2025-10-10 14:10:12 (27036): Removing VM from VirtualBox.
2025-10-10 14:10:18 (27036): called boinc_finish(0)

</stderr_txt>
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