Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
14:45:28 (2146813): wrapper (7.7.26015): starting
14:45:28 (2146813): wrapper: running run_atlas (--nthreads 9)
[2025-10-08 14:45:28] Arguments: --nthreads 9
[2025-10-08 14:45:28] Threads: 9
[2025-10-08 14:45:28] Checking for CVMFS
[2025-10-08 14:45:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 14:45:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 14:45:28] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 14:45:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 14:45:28] 2.13.2.0 129418 103770 512792 151482 0 26 31768793 39288832 11277 16776704 0 95993986 99.375 162474770 31369 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-08 14:45:28] CVMFS is ok
[2025-10-08 14:45:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-08 14:45:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-08 14:45:28] Further information can be found at the LHC@home message board.
[2025-10-08 14:45:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 14:45:28] Checking for apptainer binary...
[2025-10-08 14:45:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 14:45:28] Running /usr/bin/apptainer --version
[2025-10-08 14:45:28] apptainer version 1.4.3-1.el9
[2025-10-08 14:45:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 14:45:28] c-211-23.aglt2.org
[2025-10-08 14:45:28] apptainer works
[2025-10-08 14:45:28] Set ATHENA_PROC_NUMBER=9
[2025-10-08 14:45:28] Set ATHENA_CORE_NUMBER=9
[2025-10-08 14:45:28] Starting ATLAS job with PandaID=6836332598
[2025-10-08 14:45:28] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
15:20:02 (2146813): BOINC client no longer exists - exiting
15:20:02 (2146813): timer handler: client dead, exiting
15:27:11 (2355310): wrapper (7.7.26015): starting
15:27:11 (2355310): wrapper: running run_atlas (--nthreads 8)
[2025-10-08 15:27:11] Arguments: --nthreads 8
[2025-10-08 15:27:11] Threads: 8
[2025-10-08 15:27:11] This job has been restarted, cleaning up previous attempt
[2025-10-08 15:27:11] Checking for CVMFS
[2025-10-08 15:27:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 15:27:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 15:27:11] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 15:27:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 15:27:12] 2.13.2.0 129418 103812 511232 151483 2 27 31968594 39288832 10445 16776704 0 96077791 99.376 162488036 31368 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-08 15:27:12] CVMFS is ok
[2025-10-08 15:27:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-08 15:27:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-08 15:27:12] Further information can be found at the LHC@home message board.
[2025-10-08 15:27:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 15:27:12] Checking for apptainer binary...
[2025-10-08 15:27:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 15:27:12] Running /usr/bin/apptainer --version
[2025-10-08 15:27:12] apptainer version 1.4.3-1.el9
[2025-10-08 15:27:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 15:27:12] c-211-23.aglt2.org
[2025-10-08 15:27:12] apptainer works
[2025-10-08 15:27:12] Set ATHENA_PROC_NUMBER=8
[2025-10-08 15:27:12] Set ATHENA_CORE_NUMBER=8
[2025-10-08 15:27:12] Starting ATLAS job with PandaID=6836332598
[2025-10-08 15:27:12] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 05:29:55]  *** The last 200 lines of the pilot log: ***
[2025-10-09 05:29:55] 2025-10-09 04:44:50,807 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 05:29:55] 2025-10-09 04:44:51,019 | INFO     | time since job start (33427s) is within the limit (172800.0s)
[2025-10-09 05:29:55] 2025-10-09 04:44:51,652 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-09 05:29:55] 2025-10-09 04:44:51,697 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2899.992325
[2025-10-09 05:29:55] 2025-10-09 04:44:51,786 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6836332598/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 05:29:55] 2025-10-09 04:44:51,787 | INFO     | extracted standard info from prmon json
[2025-10-09 05:29:55] 2025-10-09 04:44:51,787 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 05:29:55] 2025-10-09 04:44:51,787 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 05:29:55] 2025-10-09 04:44:51,817 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 05:29:55] 2025-10-09 04:44:51,818 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 05:29:55] 2025-10-09 04:44:51,969 | INFO     | fitting pss+swap vs Time
[2025-10-09 05:29:55] 2025-10-09 04:44:51,970 | INFO     | sum of square deviations: 50474247486.47062
[2025-10-09 05:29:55] 2025-10-09 04:44:52,124 | INFO     | sum of deviations: 40782856375.39747
[2025-10-09 05:29:55] 2025-10-09 04:44:52,124 | INFO     | mean x: 1759968357.8260074
[2025-10-09 05:29:55] 2025-10-09 04:44:52,124 | INFO     | mean y: 2526251.141025641
[2025-10-09 05:29:55] 2025-10-09 04:44:52,124 | INFO     | -- intersect: -1419516480.287542
[2025-10-09 05:29:55] 2025-10-09 04:44:52,125 | INFO     | intersect: -1419516480.287542
[2025-10-09 05:29:55] 2025-10-09 04:44:52,125 | INFO     | chi2: 1.974888532958445
[2025-10-09 05:29:55] 2025-10-09 04:44:52,126 | INFO     | sum of square deviations: 49100183895.6783
[2025-10-09 05:29:55] 2025-10-09 04:44:52,196 | INFO     | sum of deviations: 39375220504.9204
[2025-10-09 05:29:55] 2025-10-09 04:44:52,197 | INFO     | mean x: 1759968205.3197782
[2025-10-09 05:29:55] 2025-10-09 04:44:52,197 | INFO     | mean y: 2526095.6709796675
[2025-10-09 05:29:55] 2025-10-09 04:44:52,197 | INFO     | -- intersect: -1408856320.1943681
[2025-10-09 05:29:55] 2025-10-09 04:44:52,197 | INFO     | intersect: -1408856320.1943681
[2025-10-09 05:29:55] 2025-10-09 04:44:52,198 | INFO     | chi2: 1.9743733467313078
[2025-10-09 05:29:55] 2025-10-09 04:44:52,198 | INFO     | current chi2=1.9743733467313078 (change=0.026086850905216542 %)
[2025-10-09 05:29:55] 2025-10-09 04:44:52,198 | INFO     | right removable region: 540
[2025-10-09 05:29:55] 2025-10-09 04:44:52,207 | INFO     | sum of square deviations: 49100241853.43434
[2025-10-09 05:29:55] 2025-10-09 04:44:52,232 | INFO     | sum of deviations: -66375889662.65245
[2025-10-09 05:29:55] 2025-10-09 04:44:52,232 | INFO     | mean x: 1759968510.3290203
[2025-10-09 05:29:55] 2025-10-09 04:44:52,233 | INFO     | mean y: 2538108.863216266
[2025-10-09 05:29:55] 2025-10-09 04:44:52,233 | INFO     | -- intersect: 2381741779.591589
[2025-10-09 05:29:55] 2025-10-09 04:44:52,233 | INFO     | intersect: 2381741779.591589
[2025-10-09 05:29:55] 2025-10-09 04:44:52,234 | INFO     | chi2: 0.17024035424443926
[2025-10-09 05:29:55] 2025-10-09 04:44:52,234 | INFO     | current chi2=0.17024035424443926 (change=91.37974870969484 %)
[2025-10-09 05:29:55] 2025-10-09 04:44:52,235 | INFO     | sum of square deviations: 47751432361.55044
[2025-10-09 05:29:55] 2025-10-09 04:44:52,259 | INFO     | sum of deviations: -73218278008.22015
[2025-10-09 05:29:55] 2025-10-09 04:44:52,269 | INFO     | mean x: 1759968662.8302238
[2025-10-09 05:29:55] 2025-10-09 04:44:52,269 | INFO     | mean y: 2538875.667910448
[2025-10-09 05:29:55] 2025-10-09 04:44:52,270 | INFO     | -- intersect: 2701135932.719097
[2025-10-09 05:29:55] 2025-10-09 04:44:52,270 | INFO     | intersect: 2701135932.719097
[2025-10-09 05:29:55] 2025-10-09 04:44:52,271 | INFO     | chi2: 0.1440974022600464
[2025-10-09 05:29:55] 2025-10-09 04:44:52,271 | INFO     | current chi2=0.1440974022600464 (change=15.356495291859865 %)
[2025-10-09 05:29:55] 2025-10-09 04:44:52,271 | INFO     | left removable region: 20
[2025-10-09 05:29:55] 2025-10-09 04:44:52,272 | INFO     | sum of square deviations: 43601689147.53084
[2025-10-09 05:29:55] 2025-10-09 04:44:52,294 | INFO     | sum of deviations: -53023492828.91535
[2025-10-09 05:29:55] 2025-10-09 04:44:52,304 | INFO     | mean x: 1759968784.8115385
[2025-10-09 05:29:55] 2025-10-09 04:44:52,304 | INFO     | mean y: 2536416.9192307694
[2025-10-09 05:29:55] 2025-10-09 04:44:52,305 | INFO     | -- intersect: 2142813412.2625215
[2025-10-09 05:29:55] 2025-10-09 04:44:52,305 | INFO     | intersect: 2142813412.2625215
[2025-10-09 05:29:55] 2025-10-09 04:44:52,306 | INFO     | chi2: 0.12644251947274293
[2025-10-09 05:29:55] 2025-10-09 04:44:52,306 | INFO     | -- intersect: 2142813412.2625215
[2025-10-09 05:29:55] 2025-10-09 04:44:52,306 | INFO     | current memory leak: -1.22 B/s (using 520 data points, chi2=0.13)
[2025-10-09 05:29:55] 2025-10-09 04:44:52,311 | INFO     | could have reported an average CPU frequency of 2899 MHz (22 samples)
[2025-10-09 05:29:55] 2025-10-09 04:44:52,312 | INFO     | ..............................
[2025-10-09 05:29:55] 2025-10-09 04:44:52,312 | INFO     | . Timing measurements:
[2025-10-09 05:29:55] 2025-10-09 04:44:52,312 | INFO     | . get job = 0 s
[2025-10-09 05:29:55] 2025-10-09 04:44:52,312 | INFO     | . initial setup = 3 s
[2025-10-09 05:29:55] 2025-10-09 04:44:52,312 | INFO     | . payload setup = 14 s
[2025-10-09 05:29:55] 2025-10-09 04:44:52,312 | INFO     | . stage-in = 0 s
[2025-10-09 05:29:55] 2025-10-09 04:44:52,313 | INFO     | . payload execution = 33313 s
[2025-10-09 05:29:55] 2025-10-09 04:44:52,313 | INFO     | . stage-out = 11 s
[2025-10-09 05:29:55] 2025-10-09 04:44:52,313 | INFO     | . log creation = 3 s
[2025-10-09 05:29:55] 2025-10-09 04:44:52,313 | INFO     | ..............................
[2025-10-09 05:29:55] 2025-10-09 04:44:53,152 | INFO     | time since job start (33429s) is within the limit (172800.0s)
[2025-10-09 05:29:55] 2025-10-09 04:44:54,053 | INFO     | 
[2025-10-09 05:29:55] 2025-10-09 04:44:54,053 | INFO     | job summary report
[2025-10-09 05:29:55] 2025-10-09 04:44:54,053 | INFO     | --------------------------------------------------
[2025-10-09 05:29:55] 2025-10-09 04:44:54,054 | INFO     | PanDA job id: 6836332598
[2025-10-09 05:29:55] 2025-10-09 04:44:54,054 | INFO     | task id: 46676269
[2025-10-09 05:29:55] 2025-10-09 04:44:54,054 | INFO     | errors: (none)
[2025-10-09 05:29:55] 2025-10-09 04:44:54,054 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 05:29:55] 2025-10-09 04:44:54,054 | INFO     | pilot state: finished 
[2025-10-09 05:29:55] 2025-10-09 04:44:54,054 | INFO     | transexitcode: 0
[2025-10-09 05:29:55] 2025-10-09 04:44:54,054 | INFO     | exeerrorcode: 0
[2025-10-09 05:29:55] 2025-10-09 04:44:54,055 | INFO     | exeerrordiag: 
[2025-10-09 05:29:55] 2025-10-09 04:44:54,055 | INFO     | exitcode: 0
[2025-10-09 05:29:55] 2025-10-09 04:44:54,055 | INFO     | exitmsg: OK
[2025-10-09 05:29:55] 2025-10-09 04:44:54,055 | INFO     | cpuconsumptiontime: 77229 s
[2025-10-09 05:29:55] 2025-10-09 04:44:54,055 | INFO     | nevents: 400
[2025-10-09 05:29:55] 2025-10-09 04:44:54,055 | INFO     | neventsw: 0
[2025-10-09 05:29:55] 2025-10-09 04:44:54,055 | INFO     | pid: 2378989
[2025-10-09 05:29:55] 2025-10-09 04:44:54,056 | INFO     | pgrp: 2378989
[2025-10-09 05:29:55] 2025-10-09 04:44:54,056 | INFO     | corecount: 8
[2025-10-09 05:29:55] 2025-10-09 04:44:54,056 | INFO     | event service: False
[2025-10-09 05:29:55] 2025-10-09 04:44:54,056 | INFO     | sizes: {0: 2348681, 1: 2348880, 12: 2348880, 17: 2349170, 23: 2349198, 33335: 2388944, 33337: 2389099, 33349: 2398153, 33352: 2398209, 33390: 2398403}
[2025-10-09 05:29:55] 2025-10-09 04:44:54,056 | INFO     | --------------------------------------------------
[2025-10-09 05:29:55] 2025-10-09 04:44:54,056 | INFO     | 
[2025-10-09 05:29:55] 2025-10-09 04:44:54,057 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-09 05:29:55] 2025-10-09 04:44:54,403 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 05:29:55] 2025-10-09 04:44:54,404 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 05:29:55] 2025-10-09 04:44:54,404 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 05:29:55] 2025-10-09 04:44:54,404 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 05:29:55] 2025-10-09 04:44:54,404 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 05:29:55] 2025-10-09 04:44:54,405 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 05:29:55] 2025-10-09 04:44:54,405 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 05:29:55] 2025-10-09 04:44:54,405 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 05:29:55] 2025-10-09 04:44:54,405 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 05:29:55] 2025-10-09 04:44:54,405 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 05:29:55] 2025-10-09 04:44:54,405 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 05:29:55] 2025-10-09 04:44:54,406 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 05:29:55] 2025-10-09 04:44:54,406 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 05:29:55] 2025-10-09 04:44:54,406 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 05:29:55] 2025-10-09 04:44:54,406 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 05:29:55] 2025-10-09 04:44:54,406 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 05:29:55] 2025-10-09 04:44:54,407 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 05:29:55] 2025-10-09 04:44:54,407 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 05:29:55] 2025-10-09 04:44:54,502 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 05:29:55] 2025-10-09 04:44:54,502 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 05:29:55] 2025-10-09 04:44:54,503 | INFO     | job 6836332598 has completed (purged errors)
[2025-10-09 05:29:55] 2025-10-09 04:44:54,503 | INFO     | overall cleanup function is called
[2025-10-09 05:29:55] 2025-10-09 04:44:55,525 | INFO     | --- collectZombieJob: --- 10, [2378989]
[2025-10-09 05:29:55] 2025-10-09 04:44:55,525 | INFO     | zombie collector waiting for pid 2378989
[2025-10-09 05:29:55] 2025-10-09 04:44:55,525 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 05:29:55] 2025-10-09 04:44:55,526 | INFO     | collected zombie processes
[2025-10-09 05:29:55] 2025-10-09 04:44:55,526 | INFO     | will attempt to kill all subprocesses of pid=2378989
[2025-10-09 05:29:55] 2025-10-09 04:44:59,160 | INFO     | process IDs to be killed: [2378989] (in reverse order)
[2025-10-09 05:29:55] 2025-10-09 04:45:00,715 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 05:29:55] 2025-10-09 04:45:00,715 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 05:29:55] 2025-10-09 04:45:00,909 | INFO     | did not find any defunct processes belonging to 2378989
[2025-10-09 05:29:55] 2025-10-09 04:45:01,177 | INFO     | did not find any defunct processes belonging to 2378989
[2025-10-09 05:29:55] 2025-10-09 04:45:01,177 | INFO     | ready for new job
[2025-10-09 05:29:55] 2025-10-09 04:45:01,177 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 05:29:55] 2025-10-09 04:45:01,229 | INFO     | ***************************************
[2025-10-09 05:29:55] 2025-10-09 04:45:01,229 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-09 05:29:55] 2025-10-09 04:45:01,229 | INFO     | ***************************************
[2025-10-09 05:29:55] 2025-10-09 04:45:01,230 | INFO     | 
[2025-10-09 05:29:55] 2025-10-09 04:45:01,232 | INFO     | architecture information:
[2025-10-09 05:29:55] 2025-10-09 04:45:01,317 | INFO     | executing command: cat /etc/os-release
[2025-10-09 05:29:55] 2025-10-09 04:45:01,457 | INFO     | cat /etc/os-release:
[2025-10-09 05:29:55] NAME="CentOS Linux"
[2025-10-09 05:29:55] VERSION="7 (Core)"
[2025-10-09 05:29:55] ID="centos"
[2025-10-09 05:29:55] ID_LIKE="rhel fedora"
[2025-10-09 05:29:55] VERSION_ID="7"
[2025-10-09 05:29:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 05:29:55] ANSI_COLOR="0;31"
[2025-10-09 05:29:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 05:29:55] HOME_URL="https://www.centos.org/"
[2025-10-09 05:29:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 05:29:55] 
[2025-10-09 05:29:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 05:29:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 05:29:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 05:29:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 05:29:55] 
[2025-10-09 05:29:55] 2025-10-09 04:45:01,458 | INFO     | ***************************************
[2025-10-09 05:29:55] 2025-10-09 04:45:01,961 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-09 05:29:55] 2025-10-09 04:45:02,098 | INFO     | sufficient remaining disk space (52842987520 B)
[2025-10-09 05:29:55] 2025-10-09 04:45:02,099 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 05:29:55] 2025-10-09 04:45:02,099 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 05:29:55] 2025-10-09 04:45:02,099 | INFO     | update_server=False
[2025-10-09 05:29:55] 2025-10-09 04:45:02,100 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 05:29:55] 2025-10-09 04:45:02,113 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 05:29:55] 2025-10-09 04:45:02,197 | INFO     | all data control threads have been joined
[2025-10-09 05:29:55] 2025-10-09 04:45:02,203 | INFO     | all payload control threads have been joined
[2025-10-09 05:29:55] 2025-10-09 04:45:02,292 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 05:29:55] 2025-10-09 04:45:02,292 | INFO     | aborting loop
[2025-10-09 05:29:55] 2025-10-09 04:45:03,106 | INFO     | [job] retrieve thread has finished
[2025-10-09 05:29:55] 2025-10-09 04:45:03,142 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 05:29:55] 2025-10-09 04:45:03,145 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 05:29:55] 2025-10-09 04:45:03,203 | INFO     | [data] control thread has finished
[2025-10-09 05:29:55] 2025-10-09 04:45:03,214 | INFO     | [payload] control thread has finished
[2025-10-09 05:29:55] 2025-10-09 04:45:03,298 | INFO     | [job] job monitor thread has finished
[2025-10-09 05:29:55] 2025-10-09 04:45:03,616 | INFO     | all job control threads have been joined
[2025-10-09 05:29:55] 2025-10-09 04:45:03,724 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 05:29:55] 2025-10-09 04:45:04,116 | INFO     | [payload] failed_post thread has finished
[2025-10-09 05:29:55] 2025-10-09 04:45:04,120 | INFO     | [data] copytool_out thread has finished
[2025-10-09 05:29:55] 2025-10-09 04:45:04,139 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 05:29:55] 2025-10-09 04:45:04,148 | INFO     | [job] queue monitor thread has finished
[2025-10-09 05:29:55] 2025-10-09 04:45:04,310 | INFO     | [job] validate thread has finished
[2025-10-09 05:29:55] 2025-10-09 04:45:04,320 | INFO     | [data] copytool_in thread has finished
[2025-10-09 05:29:55] 2025-10-09 04:45:04,416 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 05:29:55] 2025-10-09 04:45:04,439 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 05:29:55] 2025-10-09 04:45:04,456 | INFO     | [payload] validate_post thread has finished
[2025-10-09 05:29:55] 2025-10-09 04:45:04,622 | INFO     | [job] control thread has finished
[2025-10-09 05:29:55] 2025-10-09 04:45:08,193 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 05:29:55] 2025-10-09 04:45:27,427 | INFO     | PID=2363669 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-09 05:29:55] 2025-10-09 04:45:27,428 | INFO     | .. there are 19 such processes running
[2025-10-09 05:29:55] 2025-10-09 04:45:27,437 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 05:29:55] 2025-10-09 04:45:27,437 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 05:29:55] 2025-10-09 04:45:27,438 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 05:29:55] 2025-10-09 04:45:44,611 | INFO     | [monitor] cgroup control has ended
[2025-10-09 05:29:55] 2025-10-09 04:45:45,210 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140427509634880)>', '<ExcThread(monitor, started 140426858174208)>']
[2025-10-09 05:29:55] 2025-10-09 04:45:45,559 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 05:29:55] 2025-10-09 04:45:45,559 | INFO     | [monitor] control thread has ended
[2025-10-09 05:29:55] 2025-10-09 04:45:50,236 | INFO     | all workflow threads have been joined
[2025-10-09 05:29:55] 2025-10-09 04:45:50,236 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 05:29:55] 2025-10-09 04:45:50,237 | INFO     | traces error code: 0
[2025-10-09 05:29:55] 2025-10-09 04:45:50,237 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 05:29:55] 2025-10-09 04:45:50,452 [wrapper] ==== pilot stdout END ====
[2025-10-09 05:29:55] 2025-10-09 04:45:50,472 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 05:29:55] 2025-10-09 04:45:50,491 [wrapper] pilotpid: 2363669
[2025-10-09 05:29:55] 2025-10-09 04:45:50,551 [wrapper] Pilot exit status: 0
[2025-10-09 05:29:55] 2025-10-09 04:45:50,660 [wrapper] pandaids: 6836332598 6836332598
[2025-10-09 05:29:55] 2025-10-09 04:45:50,732 [wrapper] cleanup supervisor_pilot  963893 2363670
[2025-10-09 05:29:55] 2025-10-09 04:45:50,736 [wrapper] Test setup, not cleaning
[2025-10-09 05:29:55] 2025-10-09 04:45:50,739 [wrapper] apfmon messages muted
[2025-10-09 05:29:55] 2025-10-09 04:45:50,745 [wrapper] ==== wrapper stdout END ====
[2025-10-09 05:29:55] 2025-10-09 04:45:50,762 [wrapper] ==== wrapper stderr END ====
[2025-10-09 05:29:55]  *** Error codes and diagnostics ***
[2025-10-09 05:29:55]     "exeErrorCode": 0,
[2025-10-09 05:29:55]     "exeErrorDiag": "",
[2025-10-09 05:29:55]     "pilotErrorCode": 0,
[2025-10-09 05:29:55]     "pilotErrorDiag": "",
[2025-10-09 05:29:55]  *** Listing of results directory ***
[2025-10-09 05:29:55] total 631568
[2025-10-09 05:29:55] drwx------. 5 boincer umatlas      4096 Oct  7 03:00 pilot3
[2025-10-09 05:29:55] -rw-r--r--. 1 boincer umatlas    557409 Oct  8 14:44 pilot3.tar.gz
[2025-10-09 05:29:55] -rw-r--r--. 1 boincer umatlas      5112 Oct  8 14:44 queuedata.json
[2025-10-09 05:29:55] -rwx------. 1 boincer umatlas     36292 Oct  8 14:44 runpilot2-wrapper.sh
[2025-10-09 05:29:55] -rw-r--r--. 1 boincer umatlas       100 Oct  8 14:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 05:29:55] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  8 14:45 run_atlas
[2025-10-09 05:29:55] -rw-r--r--. 1 boincer umatlas       105 Oct  8 14:45 job.xml
[2025-10-09 05:29:55] -rw-r--r--. 3 boincer umatlas 218367260 Oct  8 14:45 EVNT.46676267._000257.pool.root.1
[2025-10-09 05:29:55] -rw-r--r--. 3 boincer umatlas 218367260 Oct  8 14:45 ATLAS.root_0
[2025-10-09 05:29:55] -rw-r--r--. 2 boincer umatlas     15120 Oct  8 14:45 start_atlas.sh
[2025-10-09 05:29:55] drwxrwx--x. 2 boincer umatlas      4096 Oct  8 14:45 shared
[2025-10-09 05:29:55] -rw-r--r--. 2 boincer umatlas    569678 Oct  8 14:45 input.tar.gz
[2025-10-09 05:29:55] -rw-r--r--. 1 boincer umatlas         0 Oct  8 14:45 boinc_lockfile
[2025-10-09 05:29:55] -rw-r--r--. 1 boincer umatlas      2548 Oct  8 15:27 pandaJob.out
[2025-10-09 05:29:55] -rw-------. 1 boincer umatlas    979287 Oct  8 15:27 agis_schedconf.cvmfs.json
[2025-10-09 05:29:55] -rw-------. 1 boincer umatlas 196258930 Oct  9 00:42 HITS.46676269._006479.pool.root.1
[2025-10-09 05:29:55] -rw-r--r--. 1 boincer umatlas       531 Oct  9 00:42 boinc_task_state.xml
[2025-10-09 05:29:55] -rw-------. 1 boincer umatlas      1044 Oct  9 00:43 memory_monitor_summary.json
[2025-10-09 05:29:55] -rw-------. 1 boincer umatlas   1560401 Oct  9 00:44 agis_ddmendpoints.agis.ALL.json
[2025-10-09 05:29:55] -rw-------. 1 boincer umatlas    700737 Oct  9 00:44 log.46676269._006479.job.log.tgz.1
[2025-10-09 05:29:55] -rw-------. 1 boincer umatlas      7823 Oct  9 00:44 heartbeat.json
[2025-10-09 05:29:55] -rw-------. 1 boincer umatlas        96 Oct  9 00:45 pilot_heartbeat.json
[2025-10-09 05:29:55] -rw-------. 1 boincer umatlas      4824 Oct  9 00:45 pilotlog.txt
[2025-10-09 05:29:55] -rw-------. 1 boincer umatlas   4208222 Oct  9 00:45 log.46676269._006479.job.log.1
[2025-10-09 05:29:55] -rw-------. 1 boincer umatlas       357 Oct  9 00:45 output.list
[2025-10-09 05:29:55] -rw-r--r--. 1 boincer umatlas       620 Oct  9 00:45 runtime_log
[2025-10-09 05:29:55] -rw-------. 1 boincer umatlas   4925440 Oct  9 00:45 result.tar.gz
[2025-10-09 05:29:55] -rw-r--r--. 1 boincer umatlas      8789 Oct  9 00:45 runtime_log.err
[2025-10-09 05:29:55] -rw-------. 1 boincer umatlas       783 Oct  9 00:45 G3yLDmNKoQ8n9Rq4apOajLDm4fhM0noT9bVof3QYDmfdMMDmwfzQZm.diag
[2025-10-09 05:29:55] -rw-r--r--. 1 boincer umatlas      6525 Oct  9 05:29 init_data.xml
[2025-10-09 05:29:55] -rw-r--r--. 1 boincer umatlas      8192 Oct  9 05:29 boinc_mmap_file
[2025-10-09 05:29:55] -rw-r--r--. 1 boincer umatlas        28 Oct  9 05:29 wrapper_checkpoint.txt
[2025-10-09 05:29:55] -rw-r--r--. 1 boincer umatlas     23521 Oct  9 05:29 stderr.txt
[2025-10-09 05:29:55] HITS file was successfully produced:
[2025-10-09 05:29:55] -rw-------. 1 boincer umatlas 196258930 Oct  9 00:42 shared/HITS.pool.root.1
[2025-10-09 05:29:55]  *** Contents of shared directory: ***
[2025-10-09 05:29:55] total 410308
[2025-10-09 05:29:55] -rw-r--r--. 3 boincer umatlas 218367260 Oct  8 14:45 ATLAS.root_0
[2025-10-09 05:29:55] -rw-r--r--. 2 boincer umatlas     15120 Oct  8 14:45 start_atlas.sh
[2025-10-09 05:29:55] -rw-r--r--. 2 boincer umatlas    569678 Oct  8 14:45 input.tar.gz
[2025-10-09 05:29:55] -rw-------. 1 boincer umatlas 196258930 Oct  9 00:42 HITS.pool.root.1
[2025-10-09 05:29:55] -rw-------. 1 boincer umatlas   4925440 Oct  9 00:45 result.tar.gz
05:29:57 (2355310): run_atlas exited; CPU time 78576.451390
05:29:57 (2355310): called boinc_finish(0)

</stderr_txt>
]]>

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