Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
14:14:53 (2546470): wrapper (7.7.26015): starting
14:14:53 (2546470): wrapper: running run_atlas (--nthreads 4)
[2025-10-08 14:14:53] Arguments: --nthreads 4
[2025-10-08 14:14:53] Threads: 4
[2025-10-08 14:14:53] Checking for CVMFS
[2025-10-08 14:14:53] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 14:14:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 14:14:53] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 14:14:53] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 14:14:53] 2.13.2.0 3732220 1160 56820 151481 1 18 3356913 4096000 6412 130560 0 7500514 99.998 44372 706 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-08 14:14:53] CVMFS is ok
[2025-10-08 14:14:53] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-08 14:14:53] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-08 14:14:53] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-08 14:14:53] Further information can be found at the LHC@home message board.
[2025-10-08 14:14:53] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 14:14:53] Checking for apptainer binary...
[2025-10-08 14:14:53] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 14:14:53] Running /usr/bin/apptainer --version
[2025-10-08 14:14:53] apptainer version 1.4.3
[2025-10-08 14:14:53] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 14:14:53] T7810-Ubuntu
[2025-10-08 14:14:53] apptainer works
[2025-10-08 14:14:53] Set ATHENA_PROC_NUMBER=4
[2025-10-08 14:14:53] Set ATHENA_CORE_NUMBER=4
[2025-10-08 14:14:53] Starting ATLAS job with PandaID=6834135957
[2025-10-08 14:14:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-08 16:40:21]  *** The last 200 lines of the pilot log: ***
[2025-10-08 16:40:21] 2025-10-08 20:39:29,212 | INFO     | intersect: -21538589056.4495
[2025-10-08 16:40:22] 2025-10-08 20:39:29,213 | INFO     | chi2: 1.3153772046521057
[2025-10-08 16:40:22] 2025-10-08 20:39:29,213 | INFO     | current chi2=1.3153772046521057 (change=-0.10804313786921789 %)
[2025-10-08 16:40:22] 2025-10-08 20:39:29,213 | INFO     | right removable region: 136
[2025-10-08 16:40:22] 2025-10-08 20:39:29,213 | INFO     | sum of square deviations: 797291228.0
[2025-10-08 16:40:22] 2025-10-08 20:39:29,214 | INFO     | sum of deviations: -6142094025.999999
[2025-10-08 16:40:22] 2025-10-08 20:39:29,214 | INFO     | mean x: 1759951778.0
[2025-10-08 16:40:22] 2025-10-08 20:39:29,214 | INFO     | mean y: 2323791.4452554747
[2025-10-08 16:40:22] 2025-10-08 20:39:29,215 | INFO     | -- intersect: 13560467819.717289
[2025-10-08 16:40:22] 2025-10-08 20:39:29,215 | INFO     | intersect: 13560467819.717289
[2025-10-08 16:40:22] 2025-10-08 20:39:29,215 | INFO     | chi2: 0.018797282302112635
[2025-10-08 16:40:22] 2025-10-08 20:39:29,215 | INFO     | current chi2=0.018797282302112635 (change=98.56941481050504 %)
[2025-10-08 16:40:22] 2025-10-08 20:39:29,215 | INFO     | sum of square deviations: 713140813.0
[2025-10-08 16:40:22] 2025-10-08 20:39:29,216 | INFO     | sum of deviations: -3650775061.5
[2025-10-08 16:40:22] 2025-10-08 20:39:29,217 | INFO     | mean x: 1759951930.5
[2025-10-08 16:40:22] 2025-10-08 20:39:29,217 | INFO     | mean y: 2319266.371212121
[2025-10-08 16:40:22] 2025-10-08 20:39:29,217 | INFO     | -- intersect: 9012024643.180407
[2025-10-08 16:40:22] 2025-10-08 20:39:29,217 | INFO     | intersect: 9012024643.180407
[2025-10-08 16:40:22] 2025-10-08 20:39:29,217 | INFO     | chi2: 0.010519451741330697
[2025-10-08 16:40:22] 2025-10-08 20:39:29,217 | INFO     | current chi2=0.010519451741330697 (change=44.037379594238416 %)
[2025-10-08 16:40:22] 2025-10-08 20:39:29,218 | INFO     | sum of square deviations: 635130048.0
[2025-10-08 16:40:22] 2025-10-08 20:39:29,219 | INFO     | sum of deviations: -1681773599.0
[2025-10-08 16:40:22] 2025-10-08 20:39:29,219 | INFO     | mean x: 1759952083.0
[2025-10-08 16:40:22] 2025-10-08 20:39:29,219 | INFO     | mean y: 2315447.409448819
[2025-10-08 16:40:22] 2025-10-08 20:39:29,219 | INFO     | -- intersect: 4662527884.240112
[2025-10-08 16:40:22] 2025-10-08 20:39:29,219 | INFO     | intersect: 4662527884.240112
[2025-10-08 16:40:22] 2025-10-08 20:39:29,219 | INFO     | chi2: 0.002790485581899138
[2025-10-08 16:40:22] 2025-10-08 20:39:29,220 | INFO     | current chi2=0.002790485581899138 (change=73.47308918262935 %)
[2025-10-08 16:40:22] 2025-10-08 20:39:29,220 | INFO     | sum of square deviations: 563026370.5
[2025-10-08 16:40:22] 2025-10-08 20:39:29,221 | INFO     | sum of deviations: -887188239.5000002
[2025-10-08 16:40:22] 2025-10-08 20:39:29,221 | INFO     | mean x: 1759952235.5
[2025-10-08 16:40:22] 2025-10-08 20:39:29,221 | INFO     | mean y: 2313773.024590164
[2025-10-08 16:40:22] 2025-10-08 20:39:29,221 | INFO     | -- intersect: 2775556745.6951475
[2025-10-08 16:40:22] 2025-10-08 20:39:29,221 | INFO     | intersect: 2775556745.6951475
[2025-10-08 16:40:22] 2025-10-08 20:39:29,222 | INFO     | chi2: 0.001667580324696866
[2025-10-08 16:40:22] 2025-10-08 20:39:29,222 | INFO     | current chi2=0.001667580324696866 (change=40.24049665356269 %)
[2025-10-08 16:40:22] 2025-10-08 20:39:29,222 | INFO     | sum of square deviations: 496597218.0
[2025-10-08 16:40:22] 2025-10-08 20:39:29,223 | INFO     | sum of deviations: -510617580.0000003
[2025-10-08 16:40:22] 2025-10-08 20:39:29,223 | INFO     | mean x: 1759952388.0
[2025-10-08 16:40:22] 2025-10-08 20:39:29,223 | INFO     | mean y: 2312908.675213675
[2025-10-08 16:40:22] 2025-10-08 20:39:29,223 | INFO     | -- intersect: 1811953794.0894802
[2025-10-08 16:40:22] 2025-10-08 20:39:29,223 | INFO     | intersect: 1811953794.0894802
[2025-10-08 16:40:22] 2025-10-08 20:39:29,224 | INFO     | chi2: 0.001434077615222355
[2025-10-08 16:40:22] 2025-10-08 20:39:29,224 | INFO     | current chi2=0.001434077615222355 (change=14.002486477942666 %)
[2025-10-08 16:40:22] 2025-10-08 20:39:29,224 | INFO     | left removable region: 50
[2025-10-08 16:40:22] 2025-10-08 20:39:29,224 | INFO     | sum of square deviations: 197203697.5
[2025-10-08 16:40:22] 2025-10-08 20:39:29,225 | INFO     | sum of deviations: 201256323.99999997
[2025-10-08 16:40:22] 2025-10-08 20:39:29,225 | INFO     | mean x: 1759952967.5
[2025-10-08 16:40:22] 2025-10-08 20:39:29,225 | INFO     | mean y: 2310285.418604651
[2025-10-08 16:40:22] 2025-10-08 20:39:29,225 | INFO     | -- intersect: -1793810523.380842
[2025-10-08 16:40:22] 2025-10-08 20:39:29,225 | INFO     | intersect: -1793810523.380842
[2025-10-08 16:40:22] 2025-10-08 20:39:29,226 | INFO     | chi2: 0.0001557891802502492
[2025-10-08 16:40:22] 2025-10-08 20:39:29,226 | INFO     | -- intersect: -1793810523.380842
[2025-10-08 16:40:22] 2025-10-08 20:39:29,226 | INFO     | current memory leak: 1.02 B/s (using 86 data points, chi2=0.00)
[2025-10-08 16:40:22] 2025-10-08 20:39:29,227 | INFO     | could have reported an average CPU frequency of 2808 MHz (8 samples)
[2025-10-08 16:40:22] 2025-10-08 20:39:29,227 | INFO     | ..............................
[2025-10-08 16:40:22] 2025-10-08 20:39:29,227 | INFO     | . Timing measurements:
[2025-10-08 16:40:22] 2025-10-08 20:39:29,227 | INFO     | . get job = 0 s
[2025-10-08 16:40:22] 2025-10-08 20:39:29,227 | INFO     | . initial setup = 3 s
[2025-10-08 16:40:22] 2025-10-08 20:39:29,227 | INFO     | . payload setup = 4 s
[2025-10-08 16:40:22] 2025-10-08 20:39:29,227 | INFO     | . stage-in = 0 s
[2025-10-08 16:40:22] 2025-10-08 20:39:29,227 | INFO     | . payload execution = 8636 s
[2025-10-08 16:40:22] 2025-10-08 20:39:29,228 | INFO     | . stage-out = 0 s
[2025-10-08 16:40:22] 2025-10-08 20:39:29,228 | INFO     | . log creation = 0 s
[2025-10-08 16:40:22] 2025-10-08 20:39:29,228 | INFO     | ..............................
[2025-10-08 16:40:22] 2025-10-08 20:39:29,339 | INFO     | 
[2025-10-08 16:40:22] 2025-10-08 20:39:29,339 | INFO     | job summary report
[2025-10-08 16:40:22] 2025-10-08 20:39:29,339 | INFO     | --------------------------------------------------
[2025-10-08 16:40:22] 2025-10-08 20:39:29,340 | INFO     | PanDA job id: 6834135957
[2025-10-08 16:40:22] 2025-10-08 20:39:29,340 | INFO     | task id: 46376905
[2025-10-08 16:40:22] 2025-10-08 20:39:29,340 | INFO     | errors: (none)
[2025-10-08 16:40:22] 2025-10-08 20:39:29,340 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-08 16:40:22] 2025-10-08 20:39:29,340 | INFO     | pilot state: finished 
[2025-10-08 16:40:22] 2025-10-08 20:39:29,340 | INFO     | transexitcode: 0
[2025-10-08 16:40:22] 2025-10-08 20:39:29,340 | INFO     | exeerrorcode: 0
[2025-10-08 16:40:22] 2025-10-08 20:39:29,340 | INFO     | exeerrordiag: 
[2025-10-08 16:40:22] 2025-10-08 20:39:29,340 | INFO     | exitcode: 0
[2025-10-08 16:40:22] 2025-10-08 20:39:29,341 | INFO     | exitmsg: OK
[2025-10-08 16:40:22] 2025-10-08 20:39:29,341 | INFO     | cpuconsumptiontime: 33694 s
[2025-10-08 16:40:22] 2025-10-08 20:39:29,341 | INFO     | nevents: 400
[2025-10-08 16:40:22] 2025-10-08 20:39:29,341 | INFO     | neventsw: 0
[2025-10-08 16:40:22] 2025-10-08 20:39:29,341 | INFO     | pid: 2557461
[2025-10-08 16:40:22] 2025-10-08 20:39:29,341 | INFO     | pgrp: 2557461
[2025-10-08 16:40:22] 2025-10-08 20:39:29,341 | INFO     | corecount: 4
[2025-10-08 16:40:22] 2025-10-08 20:39:29,341 | INFO     | event service: False
[2025-10-08 16:40:22] 2025-10-08 20:39:29,342 | INFO     | sizes: {0: 2347938, 1: 2348809, 4: 2349071, 11: 2349099, 8644: 2377056, 8645: 2377055, 8647: 2386267, 8648: 2386323, 8652: 2386517}
[2025-10-08 16:40:22] 2025-10-08 20:39:29,342 | INFO     | --------------------------------------------------
[2025-10-08 16:40:22] 2025-10-08 20:39:29,342 | INFO     | 
[2025-10-08 16:40:22] 2025-10-08 20:39:29,342 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/13
[2025-10-08 16:40:22] 2025-10-08 20:39:29,361 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-08 16:40:22] 2025-10-08 20:39:29,361 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-08 16:40:22] 2025-10-08 20:39:29,361 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-08 16:40:22] 2025-10-08 20:39:29,362 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-08 16:40:22] 2025-10-08 20:39:29,362 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-08 16:40:22] 2025-10-08 20:39:29,362 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-08 16:40:22] 2025-10-08 20:39:29,362 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-08 16:40:22] 2025-10-08 20:39:29,362 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-08 16:40:22] 2025-10-08 20:39:29,362 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-08 16:40:22] 2025-10-08 20:39:29,362 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-08 16:40:22] 2025-10-08 20:39:29,362 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-08 16:40:22] 2025-10-08 20:39:29,362 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-08 16:40:22] 2025-10-08 20:39:29,363 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-08 16:40:22] 2025-10-08 20:39:29,363 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-08 16:40:22] 2025-10-08 20:39:29,363 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-08 16:40:22] 2025-10-08 20:39:29,363 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-08 16:40:22] 2025-10-08 20:39:29,363 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-08 16:40:22] 2025-10-08 20:39:29,363 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-08 16:40:22] 2025-10-08 20:39:29,363 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-08 16:40:22] 2025-10-08 20:39:29,363 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-08 16:40:22] 2025-10-08 20:39:29,363 | INFO     | job 6834135957 has completed (purged errors)
[2025-10-08 16:40:22] 2025-10-08 20:39:29,364 | INFO     | overall cleanup function is called
[2025-10-08 16:40:22] 2025-10-08 20:39:30,372 | INFO     | --- collectZombieJob: --- 10, [2557461]
[2025-10-08 16:40:22] 2025-10-08 20:39:30,372 | INFO     | zombie collector waiting for pid 2557461
[2025-10-08 16:40:22] 2025-10-08 20:39:30,372 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-08 16:40:22] 2025-10-08 20:39:30,372 | INFO     | collected zombie processes
[2025-10-08 16:40:22] 2025-10-08 20:39:30,372 | INFO     | will attempt to kill all subprocesses of pid=2557461
[2025-10-08 16:40:22] 2025-10-08 20:39:30,894 | INFO     | process IDs to be killed: [2557461] (in reverse order)
[2025-10-08 16:40:22] 2025-10-08 20:39:31,015 | WARNING  | found no corresponding commands to process id(s)
[2025-10-08 16:40:22] 2025-10-08 20:39:31,015 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-08 16:40:22] 2025-10-08 20:39:31,028 | INFO     | did not find any defunct processes belonging to 2557461
[2025-10-08 16:40:22] 2025-10-08 20:39:31,038 | INFO     | did not find any defunct processes belonging to 2557461
[2025-10-08 16:40:22] 2025-10-08 20:39:31,038 | INFO     | ready for new job
[2025-10-08 16:40:22] 2025-10-08 20:39:31,038 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-08 16:40:22] 2025-10-08 20:39:31,040 | INFO     | ***************************************
[2025-10-08 16:40:22] 2025-10-08 20:39:31,041 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-08 16:40:22] 2025-10-08 20:39:31,041 | INFO     | ***************************************
[2025-10-08 16:40:22] 2025-10-08 20:39:31,041 | INFO     | 
[2025-10-08 16:40:22] 2025-10-08 20:39:31,044 | INFO     | architecture information:
[2025-10-08 16:40:22] 2025-10-08 20:39:31,045 | INFO     | executing command: cat /etc/os-release
[2025-10-08 16:40:22] 2025-10-08 20:39:31,058 | INFO     | cat /etc/os-release:
[2025-10-08 16:40:22] NAME="CentOS Linux"
[2025-10-08 16:40:22] VERSION="7 (Core)"
[2025-10-08 16:40:22] ID="centos"
[2025-10-08 16:40:22] ID_LIKE="rhel fedora"
[2025-10-08 16:40:22] VERSION_ID="7"
[2025-10-08 16:40:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-08 16:40:22] ANSI_COLOR="0;31"
[2025-10-08 16:40:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-08 16:40:22] HOME_URL="https://www.centos.org/"
[2025-10-08 16:40:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-08 16:40:22] 
[2025-10-08 16:40:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-08 16:40:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-08 16:40:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-08 16:40:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-08 16:40:22] 
[2025-10-08 16:40:22] 2025-10-08 20:39:31,059 | INFO     | ***************************************
[2025-10-08 16:40:22] 2025-10-08 20:39:31,561 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/13
[2025-10-08 16:40:22] 2025-10-08 20:39:31,579 | INFO     | sufficient remaining disk space (396860850176 B)
[2025-10-08 16:40:22] 2025-10-08 20:39:31,580 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-08 16:40:22] 2025-10-08 20:39:31,580 | INFO     | current server update state: UPDATING_FINAL
[2025-10-08 16:40:22] 2025-10-08 20:39:31,580 | INFO     | update_server=False
[2025-10-08 16:40:22] 2025-10-08 20:39:31,580 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-08 16:40:22] 2025-10-08 20:39:31,581 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-08 16:40:22] 2025-10-08 20:39:31,581 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-08 16:40:22] 2025-10-08 20:39:31,581 | INFO     | aborting loop
[2025-10-08 16:40:22] 2025-10-08 20:39:31,704 | INFO     | all job control threads have been joined
[2025-10-08 16:40:22] 2025-10-08 20:39:31,712 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-08 16:40:22] 2025-10-08 20:39:32,396 | INFO     | all payload control threads have been joined
[2025-10-08 16:40:22] 2025-10-08 20:39:32,585 | INFO     | [job] retrieve thread has finished
[2025-10-08 16:40:22] 2025-10-08 20:39:32,587 | INFO     | [job] job monitor thread has finished
[2025-10-08 16:40:22] 2025-10-08 20:39:32,633 | INFO     | all data control threads have been joined
[2025-10-08 16:40:22] 2025-10-08 20:39:32,709 | INFO     | [job] control thread has finished
[2025-10-08 16:40:22] 2025-10-08 20:39:32,841 | INFO     | [job] validate thread has finished
[2025-10-08 16:40:22] 2025-10-08 20:39:32,955 | INFO     | [payload] validate_post thread has finished
[2025-10-08 16:40:22] 2025-10-08 20:39:33,068 | INFO     | [job] create_data_payload thread has finished
[2025-10-08 16:40:22] 2025-10-08 20:39:33,105 | INFO     | [payload] validate_pre thread has finished
[2025-10-08 16:40:22] 2025-10-08 20:39:33,215 | INFO     | [payload] execute_payloads thread has finished
[2025-10-08 16:40:22] 2025-10-08 20:39:33,221 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-08 16:40:22] 2025-10-08 20:39:33,331 | INFO     | [data] copytool_in thread has finished
[2025-10-08 16:40:22] 2025-10-08 20:39:33,401 | INFO     | [payload] control thread has finished
[2025-10-08 16:40:22] 2025-10-08 20:39:33,638 | INFO     | [data] control thread has finished
[2025-10-08 16:40:22] 2025-10-08 20:39:33,717 | INFO     | [data] copytool_out thread has finished
[2025-10-08 16:40:22] 2025-10-08 20:39:34,010 | INFO     | [payload] failed_post thread has finished
[2025-10-08 16:40:22] 2025-10-08 20:39:34,349 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-08 16:40:22] 2025-10-08 20:39:35,354 | INFO     | [job] queue monitor thread has finished
[2025-10-08 16:40:22] 2025-10-08 20:39:35,587 | INFO     | [data] queue_monitor thread has finished
[2025-10-08 16:40:22] 2025-10-08 20:40:02,230 | INFO     | PID=2550499 has CPU usage=6.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-08 16:40:22] 2025-10-08 20:40:02,230 | INFO     | .. there are 16 such processes running
[2025-10-08 16:40:22] 2025-10-08 20:40:02,231 | INFO     | found 0 job(s) in 20 queues
[2025-10-08 16:40:22] 2025-10-08 20:40:02,231 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-08 16:40:22] 2025-10-08 20:40:02,232 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-08 16:40:22] 2025-10-08 20:40:16,167 | INFO     | [monitor] cgroup control has ended
[2025-10-08 16:40:22] 2025-10-08 20:40:16,650 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 136211372877632)>', '<ExcThread(monitor, started 136211020621568)>']
[2025-10-08 16:40:22] 2025-10-08 20:40:17,293 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-08 16:40:22] 2025-10-08 20:40:17,293 | INFO     | [monitor] control thread has ended
[2025-10-08 16:40:22] 2025-10-08 20:40:21,675 | INFO     | all workflow threads have been joined
[2025-10-08 16:40:22] 2025-10-08 20:40:21,675 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-08 16:40:22] 2025-10-08 20:40:21,676 | INFO     | traces error code: 0
[2025-10-08 16:40:22] 2025-10-08 20:40:21,676 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-08 16:40:22] 2025-10-08 20:40:21,826 [wrapper] ==== pilot stdout END ====
[2025-10-08 16:40:22] 2025-10-08 20:40:21,829 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-08 16:40:22] 2025-10-08 20:40:21,832 [wrapper] pilotpid: 2550499
[2025-10-08 16:40:22] 2025-10-08 20:40:21,834 [wrapper] Pilot exit status: 0
[2025-10-08 16:40:22] 2025-10-08 20:40:21,845 [wrapper] pandaids: 6834135957
[2025-10-08 16:40:22] 2025-10-08 20:40:21,921 [wrapper] cleanup supervisor_pilot 2963058 2550500
[2025-10-08 16:40:22] 2025-10-08 20:40:21,924 [wrapper] Test setup, not cleaning
[2025-10-08 16:40:22] 2025-10-08 20:40:21,927 [wrapper] apfmon messages muted
[2025-10-08 16:40:22] 2025-10-08 20:40:21,931 [wrapper] ==== wrapper stdout END ====
[2025-10-08 16:40:22] 2025-10-08 20:40:21,933 [wrapper] ==== wrapper stderr END ====
[2025-10-08 16:40:22]  *** Error codes and diagnostics ***
[2025-10-08 16:40:22]     "exeErrorCode": 0,
[2025-10-08 16:40:22]     "exeErrorDiag": "",
[2025-10-08 16:40:22]     "pilotErrorCode": 0,
[2025-10-08 16:40:22]     "pilotErrorDiag": "",
[2025-10-08 16:40:22]  *** Listing of results directory ***
[2025-10-08 16:40:22] total 385004
[2025-10-08 16:40:22] -rw-r--r-- 1 whitlerd whitlerd      5112 Oct  7 07:54 queuedata.json
[2025-10-08 16:40:22] -rwx------ 1 whitlerd whitlerd     36292 Oct  7 07:55 runpilot2-wrapper.sh
[2025-10-08 16:40:22] -rw-r--r-- 1 whitlerd whitlerd    552446 Oct  7 07:55 pilot3.tar.gz
[2025-10-08 16:40:22] -rw-rw-r-- 1 whitlerd whitlerd       100 Oct  8 14:14 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-08 16:40:22] -rwxr-xr-x 1 whitlerd whitlerd      7986 Oct  8 14:14 run_atlas
[2025-10-08 16:40:22] -rw-rw-r-- 1 whitlerd whitlerd       105 Oct  8 14:14 job.xml
[2025-10-08 16:40:22] -rw-r--r-- 2 whitlerd whitlerd 212105064 Oct  8 14:14 EVNT.46376901._003924.pool.root.1
[2025-10-08 16:40:22] -rw-r--r-- 2 whitlerd whitlerd     15120 Oct  8 14:14 start_atlas.sh
[2025-10-08 16:40:22] drwxrwx--x 2 whitlerd whitlerd      4096 Oct  8 14:14 shared
[2025-10-08 16:40:22] -rw-r--r-- 2 whitlerd whitlerd    565613 Oct  8 14:14 input.tar.gz
[2025-10-08 16:40:22] -rw-rw-r-- 1 whitlerd whitlerd         0 Oct  8 14:14 boinc_setup_complete
[2025-10-08 16:40:22] -rw-rw-r-- 1 whitlerd whitlerd      8957 Oct  8 14:14 init_data.xml
[2025-10-08 16:40:22] -rw-rw-r-- 1 whitlerd whitlerd         0 Oct  8 14:14 boinc_lockfile
[2025-10-08 16:40:22] -rw-rw-r-- 1 whitlerd whitlerd      2519 Oct  8 14:14 pandaJob.out
[2025-10-08 16:40:22] -rw------- 1 whitlerd whitlerd    979295 Oct  8 14:14 agis_schedconf.cvmfs.json
[2025-10-08 16:40:22] -rw------- 1 whitlerd whitlerd   1560401 Oct  8 14:15 agis_ddmendpoints.agis.ALL.json
[2025-10-08 16:40:22] drwx------ 4 whitlerd whitlerd      4096 Oct  8 14:15 pilot3
[2025-10-08 16:40:22] -rw------- 1 whitlerd whitlerd 175141516 Oct  8 16:38 HITS.46376905._134000.pool.root.1
[2025-10-08 16:40:22] -rw-rw-r-- 1 whitlerd whitlerd       529 Oct  8 16:38 boinc_task_state.xml
[2025-10-08 16:40:22] -rw------- 1 whitlerd whitlerd      1032 Oct  8 16:39 memory_monitor_summary.json
[2025-10-08 16:40:22] -rw------- 1 whitlerd whitlerd    315587 Oct  8 16:39 log.46376905._134000.job.log.tgz.1
[2025-10-08 16:40:22] -rw------- 1 whitlerd whitlerd      7782 Oct  8 16:39 heartbeat.json
[2025-10-08 16:40:22] -rw------- 1 whitlerd whitlerd        95 Oct  8 16:40 pilot_heartbeat.json
[2025-10-08 16:40:22] -rw-rw-r-- 1 whitlerd whitlerd      8192 Oct  8 16:40 boinc_mmap_file
[2025-10-08 16:40:22] -rw-rw-r-- 1 whitlerd whitlerd        27 Oct  8 16:40 wrapper_checkpoint.txt
[2025-10-08 16:40:22] -rw------- 1 whitlerd whitlerd      4840 Oct  8 16:40 pilotlog.txt
[2025-10-08 16:40:22] -rw------- 1 whitlerd whitlerd   1231260 Oct  8 16:40 log.46376905._134000.job.log.1
[2025-10-08 16:40:22] -rw------- 1 whitlerd whitlerd       357 Oct  8 16:40 output.list
[2025-10-08 16:40:22] -rw-rw-r-- 1 whitlerd whitlerd       620 Oct  8 16:40 runtime_log
[2025-10-08 16:40:22] -rw------- 1 whitlerd whitlerd   1566720 Oct  8 16:40 result.tar.gz
[2025-10-08 16:40:22] -rw------- 1 whitlerd whitlerd       648 Oct  8 16:40 UfYKDmLTLQ8n9Rq4apOajLDm4fhM0noT9bVof3QYDmAeLMDmv9S4Po.diag
[2025-10-08 16:40:22] -rw-rw-r-- 1 whitlerd whitlerd      8892 Oct  8 16:40 runtime_log.err
[2025-10-08 16:40:22] -rw-rw-r-- 1 whitlerd whitlerd     21048 Oct  8 16:40 stderr.txt
[2025-10-08 16:40:22] HITS file was successfully produced:
[2025-10-08 16:40:22] -rw------- 1 whitlerd whitlerd 175141516 Oct  8 16:38 shared/HITS.pool.root.1
[2025-10-08 16:40:22]  *** Contents of shared directory: ***
[2025-10-08 16:40:22] total 380288
[2025-10-08 16:40:22] -rw-r--r-- 2 whitlerd whitlerd 212105064 Oct  8 14:14 ATLAS.root_0
[2025-10-08 16:40:22] -rw-r--r-- 2 whitlerd whitlerd     15120 Oct  8 14:14 start_atlas.sh
[2025-10-08 16:40:22] -rw-r--r-- 2 whitlerd whitlerd    565613 Oct  8 14:14 input.tar.gz
[2025-10-08 16:40:22] -rw------- 1 whitlerd whitlerd 175141516 Oct  8 16:38 HITS.pool.root.1
[2025-10-08 16:40:22] -rw------- 1 whitlerd whitlerd   1566720 Oct  8 16:40 result.tar.gz
16:40:23 (2546470): run_atlas exited; CPU time 34128.955027
16:40:23 (2546470): called boinc_finish(0)

</stderr_txt>
]]>

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