Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
21:20:43 (582525): wrapper (7.7.26015): starting
21:20:43 (582525): wrapper: running run_atlas (--nthreads 4)
[2025-10-08 21:20:43] Arguments: --nthreads 4
[2025-10-08 21:20:43] Threads: 4
[2025-10-08 21:20:43] Checking for CVMFS
[2025-10-08 21:20:44] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 21:20:44] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 21:20:44] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 21:20:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 21:20:44] 2.9.2.0 557345 66 51224 151483 1 56 27289980 36864000 0 130560 0 65399 99.974 4074 925 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-08 21:20:44] CVMFS is ok
[2025-10-08 21:20:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-08 21:20:44] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-08 21:20:44] Further information can be found at the LHC@home message board.
[2025-10-08 21:20:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 21:20:44] Checking for apptainer binary...
[2025-10-08 21:20:44] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 21:20:44] Running /usr/bin/apptainer --version
[2025-10-08 21:20:44] apptainer version 1.4.1-1.1
[2025-10-08 21:20:44] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 21:20:44] thA381
[2025-10-08 21:20:44] apptainer works
[2025-10-08 21:20:44] Set ATHENA_PROC_NUMBER=4
[2025-10-08 21:20:44] Set ATHENA_CORE_NUMBER=4
[2025-10-08 21:20:44] Starting ATLAS job with PandaID=6834105734
[2025-10-08 21:20:44] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-08 22:54:05]  *** The last 200 lines of the pilot log: ***
[2025-10-08 22:54:05] 2025-10-08 20:53:06,946 | INFO     | did not find any defunct processes belonging to 592878
[2025-10-08 22:54:05] 2025-10-08 20:53:06,947 | INFO     | did not find any defunct processes belonging to 592878
[2025-10-08 22:54:05] 2025-10-08 20:53:06,947 | INFO     | ready for new job
[2025-10-08 22:54:05] 2025-10-08 20:53:06,947 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-08 22:54:05] 2025-10-08 20:53:06,948 | INFO     | ***************************************
[2025-10-08 22:54:05] 2025-10-08 20:53:06,948 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-08 22:54:05] 2025-10-08 20:53:06,948 | INFO     | ***************************************
[2025-10-08 22:54:05] 2025-10-08 20:53:06,948 | INFO     | 
[2025-10-08 22:54:05] 2025-10-08 20:53:06,949 | INFO     | architecture information:
[2025-10-08 22:54:05] 2025-10-08 20:53:06,949 | INFO     | executing command: cat /etc/os-release
[2025-10-08 22:54:05] 2025-10-08 20:53:06,963 | INFO     | cat /etc/os-release:
[2025-10-08 22:54:05] NAME="CentOS Linux"
[2025-10-08 22:54:05] VERSION="7 (Core)"
[2025-10-08 22:54:05] ID="centos"
[2025-10-08 22:54:05] ID_LIKE="rhel fedora"
[2025-10-08 22:54:05] VERSION_ID="7"
[2025-10-08 22:54:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-08 22:54:05] ANSI_COLOR="0;31"
[2025-10-08 22:54:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-08 22:54:05] HOME_URL="https://www.centos.org/"
[2025-10-08 22:54:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-08 22:54:05] 
[2025-10-08 22:54:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-08 22:54:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-08 22:54:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-08 22:54:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-08 22:54:05] 
[2025-10-08 22:54:05] 2025-10-08 20:53:06,963 | INFO     | ***************************************
[2025-10-08 22:54:05] 2025-10-08 20:53:07,466 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-08 22:54:05] 2025-10-08 20:53:07,483 | INFO     | sufficient remaining disk space (234046357504 B)
[2025-10-08 22:54:05] 2025-10-08 20:53:07,483 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-08 22:54:05] 2025-10-08 20:53:07,484 | INFO     | current server update state: UPDATING_FINAL
[2025-10-08 22:54:05] 2025-10-08 20:53:07,484 | INFO     | update_server=False
[2025-10-08 22:54:05] 2025-10-08 20:53:07,484 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-08 22:54:05] 2025-10-08 20:53:07,484 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-08 22:54:05] 2025-10-08 20:53:07,484 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-08 22:54:05] 2025-10-08 20:53:07,484 | INFO     | aborting loop
[2025-10-08 22:54:05] 2025-10-08 20:53:07,550 | INFO     | all job control threads have been joined
[2025-10-08 22:54:05] 2025-10-08 20:53:07,863 | INFO     | all data control threads have been joined
[2025-10-08 22:54:05] 2025-10-08 20:53:08,343 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-08 22:54:05] 2025-10-08 20:53:08,489 | INFO     | [job] retrieve thread has finished
[2025-10-08 22:54:05] 2025-10-08 20:53:08,490 | INFO     | [job] queue monitor thread has finished
[2025-10-08 22:54:05] 2025-10-08 20:53:08,490 | INFO     | [job] job monitor thread has finished
[2025-10-08 22:54:05] 2025-10-08 20:53:08,556 | INFO     | [job] control thread has finished
[2025-10-08 22:54:05] 2025-10-08 20:53:08,789 | INFO     | [data] copytool_in thread has finished
[2025-10-08 22:54:05] 2025-10-08 20:53:08,869 | INFO     | [data] control thread has finished
[2025-10-08 22:54:05] 2025-10-08 20:53:08,933 | INFO     | all payload control threads have been joined
[2025-10-08 22:54:05] 2025-10-08 20:53:08,942 | INFO     | [payload] validate_post thread has finished
[2025-10-08 22:54:05] 2025-10-08 20:53:09,109 | INFO     | [payload] failed_post thread has finished
[2025-10-08 22:54:05] 2025-10-08 20:53:09,605 | INFO     | [job] validate thread has finished
[2025-10-08 22:54:05] 2025-10-08 20:53:09,740 | INFO     | [payload] validate_pre thread has finished
[2025-10-08 22:54:05] 2025-10-08 20:53:09,741 | INFO     | [job] create_data_payload thread has finished
[2025-10-08 22:54:05] 2025-10-08 20:53:09,905 | INFO     | [payload] execute_payloads thread has finished
[2025-10-08 22:54:05] 2025-10-08 20:53:09,938 | INFO     | [payload] control thread has finished
[2025-10-08 22:54:05] 2025-10-08 20:53:10,349 | INFO     | [data] copytool_out thread has finished
[2025-10-08 22:54:05] 2025-10-08 20:53:10,878 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-08 22:54:05] 2025-10-08 20:53:14,885 | INFO     | [data] queue_monitor thread has finished
[2025-10-08 22:54:05] 2025-10-08 20:53:17,622 | INFO     | job.realtimelogging is not enabled
[2025-10-08 22:54:05] 2025-10-08 20:53:18,628 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-08 22:54:05] 2025-10-08 20:53:37,592 | INFO     | PID=586312 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-08 22:54:05] 2025-10-08 20:53:37,593 | INFO     | found 0 job(s) in 20 queues
[2025-10-08 22:54:05] 2025-10-08 20:53:37,593 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-08 22:54:05] 2025-10-08 20:53:37,593 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-08 22:54:05] 2025-10-08 20:53:58,670 | INFO     | [monitor] cgroup control has ended
[2025-10-08 22:54:05] 2025-10-08 20:54:00,725 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139795267209024)>', '<ExcThread(monitor, started 139794365523712)>']
[2025-10-08 22:54:05] 2025-10-08 20:54:01,716 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-08 22:54:05] 2025-10-08 20:54:01,716 | INFO     | [monitor] control thread has ended
[2025-10-08 22:54:05] 2025-10-08 20:54:05,748 | INFO     | all workflow threads have been joined
[2025-10-08 22:54:05] 2025-10-08 20:54:05,748 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-08 22:54:05] 2025-10-08 20:54:05,748 | INFO     | traces error code: 0
[2025-10-08 22:54:05] 2025-10-08 20:54:05,748 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-08 22:54:05] 2025-10-08 20:54:05,830 [wrapper] ==== pilot stdout END ====
[2025-10-08 22:54:05] 2025-10-08 20:54:05,834 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-08 22:54:05] 2025-10-08 20:54:05,838 [wrapper] pilotpid: 586312
[2025-10-08 22:54:05] 2025-10-08 20:54:05,841 [wrapper] Pilot exit status: 0
[2025-10-08 22:54:05] 2025-10-08 20:54:05,853 [wrapper] pandaids: 6834105734
[2025-10-08 22:54:05] 2025-10-08 20:54:05,877 [wrapper] cleanup supervisor_pilot  605482 586313
[2025-10-08 22:54:05] 2025-10-08 20:54:05,881 [wrapper] Test setup, not cleaning
[2025-10-08 22:54:05] 2025-10-08 20:54:05,885 [wrapper] apfmon messages muted
[2025-10-08 22:54:05] 2025-10-08 20:54:05,889 [wrapper] ==== wrapper stdout END ====
[2025-10-08 22:54:05] 2025-10-08 20:54:05,892 [wrapper] ==== wrapper stderr END ====
[2025-10-08 22:54:05]  *** Error codes and diagnostics ***
[2025-10-08 22:54:05]     "exeErrorCode": 0,
[2025-10-08 22:54:05]     "exeErrorDiag": "",
[2025-10-08 22:54:05]     "pilotErrorCode": 0,
[2025-10-08 22:54:05]     "pilotErrorDiag": "",
[2025-10-08 22:54:05]  *** Listing of results directory ***
[2025-10-08 22:54:05] total 418292
[2025-10-08 22:54:05] -rw-r--r-- 1 boinc boinc    552446 Oct  7 13:39 pilot3.tar.gz
[2025-10-08 22:54:05] -rwx------ 1 boinc boinc     36292 Oct  7 13:48 runpilot2-wrapper.sh
[2025-10-08 22:54:05] -rw-r--r-- 1 boinc boinc      5112 Oct  7 13:48 queuedata.json
[2025-10-08 22:54:05] -rw-r--r-- 1 boinc boinc       100 Oct  8 21:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-08 22:54:05] -rwxr-xr-x 1 boinc boinc      7986 Oct  8 21:20 run_atlas
[2025-10-08 22:54:05] -rw-r--r-- 1 boinc boinc       105 Oct  8 21:20 job.xml
[2025-10-08 22:54:05] -rw-r--r-- 2 boinc boinc 220852238 Oct  8 21:20 EVNT.46373045._002794.pool.root.1
[2025-10-08 22:54:05] -rw-r--r-- 2 boinc boinc    565614 Oct  8 21:20 input.tar.gz
[2025-10-08 22:54:05] -rw-r--r-- 2 boinc boinc     15120 Oct  8 21:20 start_atlas.sh
[2025-10-08 22:54:05] drwxrwx--x 2 boinc boinc      4096 Oct  8 21:20 shared
[2025-10-08 22:54:05] -rw-r--r-- 1 boinc boinc         0 Oct  8 21:20 boinc_setup_complete
[2025-10-08 22:54:05] -rw-r--r-- 1 boinc boinc      6375 Oct  8 21:20 init_data.xml
[2025-10-08 22:54:05] -rw-r--r-- 1 boinc boinc         0 Oct  8 21:20 boinc_lockfile
[2025-10-08 22:54:05] -rw-r--r-- 1 boinc boinc      2538 Oct  8 21:20 pandaJob.out
[2025-10-08 22:54:05] -rw------- 1 boinc boinc    979287 Oct  8 21:20 agis_schedconf.cvmfs.json
[2025-10-08 22:54:05] -rw------- 1 boinc boinc   1560401 Oct  8 21:20 agis_ddmendpoints.agis.ALL.json
[2025-10-08 22:54:05] drwx------ 4 boinc boinc      4096 Oct  8 21:20 pilot3
[2025-10-08 22:54:05] -rw------- 1 boinc boinc 201436211 Oct  8 22:52 HITS.46373048._097587.pool.root.1
[2025-10-08 22:54:05] -rw-r--r-- 1 boinc boinc       529 Oct  8 22:52 boinc_task_state.xml
[2025-10-08 22:54:05] -rw------- 1 boinc boinc      1019 Oct  8 22:52 memory_monitor_summary.json
[2025-10-08 22:54:05] -rw------- 1 boinc boinc    278031 Oct  8 22:53 log.46373048._097587.job.log.tgz.1
[2025-10-08 22:54:05] -rw------- 1 boinc boinc      7762 Oct  8 22:53 heartbeat.json
[2025-10-08 22:54:05] -rw------- 1 boinc boinc        95 Oct  8 22:53 pilot_heartbeat.json
[2025-10-08 22:54:05] -rw-r--r-- 1 boinc boinc      8192 Oct  8 22:53 boinc_mmap_file
[2025-10-08 22:54:05] -rw-r--r-- 1 boinc boinc        27 Oct  8 22:53 wrapper_checkpoint.txt
[2025-10-08 22:54:05] -rw------- 1 boinc boinc      4823 Oct  8 22:54 pilotlog.txt
[2025-10-08 22:54:05] -rw------- 1 boinc boinc    803197 Oct  8 22:54 log.46373048._097587.job.log.1
[2025-10-08 22:54:05] -rw------- 1 boinc boinc       357 Oct  8 22:54 output.list
[2025-10-08 22:54:05] -rw-r--r-- 1 boinc boinc       620 Oct  8 22:54 runtime_log
[2025-10-08 22:54:05] -rw------- 1 boinc boinc   1095680 Oct  8 22:54 result.tar.gz
[2025-10-08 22:54:05] -rw-r--r-- 1 boinc boinc      8777 Oct  8 22:54 runtime_log.err
[2025-10-08 22:54:05] -rw------- 1 boinc boinc       659 Oct  8 22:54 oLcKDm1LLQ8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmsxWNDmSZvbjm.diag
[2025-10-08 22:54:05] -rw-r--r-- 1 boinc boinc      9836 Oct  8 22:54 stderr.txt
[2025-10-08 22:54:05] HITS file was successfully produced:
[2025-10-08 22:54:05] -rw------- 1 boinc boinc 201436211 Oct  8 22:52 shared/HITS.pool.root.1
[2025-10-08 22:54:05]  *** Contents of shared directory: ***
[2025-10-08 22:54:05] total 414048
[2025-10-08 22:54:05] -rw-r--r-- 2 boinc boinc 220852238 Oct  8 21:20 ATLAS.root_0
[2025-10-08 22:54:05] -rw-r--r-- 2 boinc boinc    565614 Oct  8 21:20 input.tar.gz
[2025-10-08 22:54:05] -rw-r--r-- 2 boinc boinc     15120 Oct  8 21:20 start_atlas.sh
[2025-10-08 22:54:05] -rw------- 1 boinc boinc 201436211 Oct  8 22:52 HITS.pool.root.1
[2025-10-08 22:54:05] -rw------- 1 boinc boinc   1095680 Oct  8 22:54 result.tar.gz
22:54:28 (582525): run_atlas exited; CPU time 20971.243124
22:54:28 (582525): called boinc_finish(0)

</stderr_txt>
]]>

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