Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
13:35:45 (2457888): wrapper (7.7.26015): starting
13:35:45 (2457888): wrapper: running run_atlas (--nthreads 4)
[2025-10-08 13:35:45] Arguments: --nthreads 4
[2025-10-08 13:35:45] Threads: 4
[2025-10-08 13:35:45] Checking for CVMFS
[2025-10-08 13:35:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 13:35:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 13:35:46] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 13:35:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 13:35:46] 2.13.2.0 3732220 1121 56212 151480 0 57 3351473 4096000 12824 130560 0 7274923 99.998 43062 731 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-08 13:35:46] CVMFS is ok
[2025-10-08 13:35:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-08 13:35:46] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-08 13:35:46] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-08 13:35:46] Further information can be found at the LHC@home message board.
[2025-10-08 13:35:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 13:35:46] Checking for apptainer binary...
[2025-10-08 13:35:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 13:35:46] Running /usr/bin/apptainer --version
[2025-10-08 13:35:46] apptainer version 1.4.3
[2025-10-08 13:35:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 13:35:46] T7810-Ubuntu
[2025-10-08 13:35:46] apptainer works
[2025-10-08 13:35:46] Set ATHENA_PROC_NUMBER=4
[2025-10-08 13:35:46] Set ATHENA_CORE_NUMBER=4
[2025-10-08 13:35:46] Starting ATLAS job with PandaID=6826416365
[2025-10-08 13:35:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-08 16:46:25]  *** The last 200 lines of the pilot log: ***
[2025-10-08 16:46:25] 2025-10-08 20:45:39,683 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-08 16:46:25] 2025-10-08 20:45:39,697 | INFO     | found 40 cores (20 cores per socket, 2 sockets) HT, CPU MHz: 2719.9466250000005
[2025-10-08 16:46:25] 2025-10-08 20:45:39,709 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/8/PanDA_Pilot-6826416365/memory_monitor_summary.json (trf name=prmon)
[2025-10-08 16:46:25] 2025-10-08 20:45:39,710 | INFO     | extracted standard info from prmon json
[2025-10-08 16:46:25] 2025-10-08 20:45:39,710 | INFO     | extracted standard memory fields from prmon json
[2025-10-08 16:46:25] 2025-10-08 20:45:39,711 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-08 16:46:25] 2025-10-08 20:45:39,711 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-08 16:46:25] 2025-10-08 20:45:39,711 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-08 16:46:25] 2025-10-08 20:45:39,715 | INFO     | fitting pss+swap vs Time
[2025-10-08 16:46:25] 2025-10-08 20:45:39,716 | INFO     | sum of square deviations: 1995283922.5
[2025-10-08 16:46:25] 2025-10-08 20:45:39,717 | INFO     | sum of deviations: -20923042944.00001
[2025-10-08 16:46:25] 2025-10-08 20:45:39,718 | INFO     | mean x: 1759950633.5
[2025-10-08 16:46:25] 2025-10-08 20:45:39,718 | INFO     | mean y: 2339082.376344086
[2025-10-08 16:46:25] 2025-10-08 20:45:39,718 | INFO     | -- intersect: 18457618688.850758
[2025-10-08 16:46:25] 2025-10-08 20:45:39,718 | INFO     | intersect: 18457618688.850758
[2025-10-08 16:46:25] 2025-10-08 20:45:39,718 | INFO     | chi2: 1.7010545482192756
[2025-10-08 16:46:25] 2025-10-08 20:45:39,719 | INFO     | sum of square deviations: 1838657730.0
[2025-10-08 16:46:25] 2025-10-08 20:45:39,720 | INFO     | sum of deviations: -20325183164.0
[2025-10-08 16:46:25] 2025-10-08 20:45:39,720 | INFO     | mean x: 1759950481.0
[2025-10-08 16:46:25] 2025-10-08 20:45:39,720 | INFO     | mean y: 2339664.624309392
[2025-10-08 16:46:25] 2025-10-08 20:45:39,721 | INFO     | -- intersect: 19457464619.22633
[2025-10-08 16:46:25] 2025-10-08 20:45:39,721 | INFO     | intersect: 19457464619.22633
[2025-10-08 16:46:25] 2025-10-08 20:45:39,721 | INFO     | chi2: 1.6969298117628306
[2025-10-08 16:46:25] 2025-10-08 20:45:39,721 | INFO     | current chi2=1.6969298117628306 (change=0.2424811397590322 %)
[2025-10-08 16:46:25] 2025-10-08 20:45:39,721 | INFO     | right removable region: 180
[2025-10-08 16:46:25] 2025-10-08 20:45:39,722 | INFO     | sum of square deviations: 1838657730.0
[2025-10-08 16:46:25] 2025-10-08 20:45:39,723 | INFO     | sum of deviations: -42778087686.0
[2025-10-08 16:46:25] 2025-10-08 20:45:39,723 | INFO     | mean x: 1759950786.0
[2025-10-08 16:46:25] 2025-10-08 20:45:39,723 | INFO     | mean y: 2359997.17679558
[2025-10-08 16:46:25] 2025-10-08 20:45:39,724 | INFO     | -- intersect: 40949257191.87797
[2025-10-08 16:46:25] 2025-10-08 20:45:39,724 | INFO     | intersect: 40949257191.87797
[2025-10-08 16:46:25] 2025-10-08 20:45:39,724 | INFO     | chi2: 0.2977562302024845
[2025-10-08 16:46:25] 2025-10-08 20:45:39,724 | INFO     | current chi2=0.2977562302024845 (change=82.4957858926872 %)
[2025-10-08 16:46:25] 2025-10-08 20:45:39,725 | INFO     | sum of square deviations: 1690450300.0
[2025-10-08 16:46:25] 2025-10-08 20:45:39,726 | INFO     | sum of deviations: -34793750228.0
[2025-10-08 16:46:25] 2025-10-08 20:45:39,726 | INFO     | mean x: 1759950938.5
[2025-10-08 16:46:25] 2025-10-08 20:45:39,726 | INFO     | mean y: 2351768.9545454546
[2025-10-08 16:46:25] 2025-10-08 20:45:39,726 | INFO     | -- intersect: 36226601229.41084
[2025-10-08 16:46:25] 2025-10-08 20:45:39,726 | INFO     | intersect: 36226601229.41084
[2025-10-08 16:46:25] 2025-10-08 20:45:39,727 | INFO     | chi2: 0.27292532670325936
[2025-10-08 16:46:25] 2025-10-08 20:45:39,727 | INFO     | current chi2=0.27292532670325936 (change=8.339339694870281 %)
[2025-10-08 16:46:25] 2025-10-08 20:45:39,727 | INFO     | left removable region: 20
[2025-10-08 16:46:25] 2025-10-08 20:45:39,727 | INFO     | sum of square deviations: 1270051720.0
[2025-10-08 16:46:25] 2025-10-08 20:45:39,729 | INFO     | sum of deviations: -16130720348.5
[2025-10-08 16:46:25] 2025-10-08 20:45:39,729 | INFO     | mean x: 1759951060.5
[2025-10-08 16:46:25] 2025-10-08 20:45:39,729 | INFO     | mean y: 2331764.31875
[2025-10-08 16:46:25] 2025-10-08 20:45:39,729 | INFO     | -- intersect: 22355183964.677567
[2025-10-08 16:46:25] 2025-10-08 20:45:39,729 | INFO     | intersect: 22355183964.677567
[2025-10-08 16:46:25] 2025-10-08 20:45:39,729 | INFO     | chi2: 0.15520803732705069
[2025-10-08 16:46:25] 2025-10-08 20:45:39,730 | INFO     | -- intersect: 22355183964.677567
[2025-10-08 16:46:25] 2025-10-08 20:45:39,730 | INFO     | current memory leak: -12.70 B/s (using 160 data points, chi2=0.16)
[2025-10-08 16:46:25] 2025-10-08 20:45:39,730 | INFO     | could have reported an average CPU frequency of 2747 MHz (10 samples)
[2025-10-08 16:46:25] 2025-10-08 20:45:39,730 | INFO     | ..............................
[2025-10-08 16:46:25] 2025-10-08 20:45:39,731 | INFO     | . Timing measurements:
[2025-10-08 16:46:25] 2025-10-08 20:45:39,731 | INFO     | . get job = 0 s
[2025-10-08 16:46:25] 2025-10-08 20:45:39,731 | INFO     | . initial setup = 5 s
[2025-10-08 16:46:25] 2025-10-08 20:45:39,731 | INFO     | . payload setup = 6 s
[2025-10-08 16:46:25] 2025-10-08 20:45:39,731 | INFO     | . stage-in = 0 s
[2025-10-08 16:46:25] 2025-10-08 20:45:39,731 | INFO     | . payload execution = 11341 s
[2025-10-08 16:46:25] 2025-10-08 20:45:39,731 | INFO     | . stage-out = 3 s
[2025-10-08 16:46:25] 2025-10-08 20:45:39,731 | INFO     | . log creation = 0 s
[2025-10-08 16:46:25] 2025-10-08 20:45:39,731 | INFO     | ..............................
[2025-10-08 16:46:25] 2025-10-08 20:45:40,051 | INFO     | 
[2025-10-08 16:46:25] 2025-10-08 20:45:40,051 | INFO     | job summary report
[2025-10-08 16:46:25] 2025-10-08 20:45:40,051 | INFO     | --------------------------------------------------
[2025-10-08 16:46:25] 2025-10-08 20:45:40,051 | INFO     | PanDA job id: 6826416365
[2025-10-08 16:46:25] 2025-10-08 20:45:40,051 | INFO     | task id: 46373048
[2025-10-08 16:46:25] 2025-10-08 20:45:40,052 | INFO     | errors: (none)
[2025-10-08 16:46:25] 2025-10-08 20:45:40,052 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-08 16:46:25] 2025-10-08 20:45:40,052 | INFO     | pilot state: finished 
[2025-10-08 16:46:25] 2025-10-08 20:45:40,052 | INFO     | transexitcode: 0
[2025-10-08 16:46:25] 2025-10-08 20:45:40,052 | INFO     | exeerrorcode: 0
[2025-10-08 16:46:25] 2025-10-08 20:45:40,052 | INFO     | exeerrordiag: 
[2025-10-08 16:46:25] 2025-10-08 20:45:40,052 | INFO     | exitcode: 0
[2025-10-08 16:46:25] 2025-10-08 20:45:40,052 | INFO     | exitmsg: OK
[2025-10-08 16:46:25] 2025-10-08 20:45:40,052 | INFO     | cpuconsumptiontime: 43826 s
[2025-10-08 16:46:25] 2025-10-08 20:45:40,053 | INFO     | nevents: 400
[2025-10-08 16:46:25] 2025-10-08 20:45:40,053 | INFO     | neventsw: 0
[2025-10-08 16:46:25] 2025-10-08 20:45:40,053 | INFO     | pid: 2468873
[2025-10-08 16:46:25] 2025-10-08 20:45:40,053 | INFO     | pgrp: 2468873
[2025-10-08 16:46:25] 2025-10-08 20:45:40,053 | INFO     | corecount: 4
[2025-10-08 16:46:25] 2025-10-08 20:45:40,053 | INFO     | event service: False
[2025-10-08 16:46:25] 2025-10-08 20:45:40,053 | INFO     | sizes: {0: 2348684, 1: 2348883, 5: 2349145, 11: 2349201, 11352: 2378343, 11356: 2387553, 11361: 2387691}
[2025-10-08 16:46:25] 2025-10-08 20:45:40,054 | INFO     | --------------------------------------------------
[2025-10-08 16:46:25] 2025-10-08 20:45:40,054 | INFO     | 
[2025-10-08 16:46:25] 2025-10-08 20:45:40,054 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/8
[2025-10-08 16:46:25] 2025-10-08 20:45:40,075 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-08 16:46:25] 2025-10-08 20:45:40,075 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-08 16:46:25] 2025-10-08 20:45:40,075 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-08 16:46:25] 2025-10-08 20:45:40,075 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-08 16:46:25] 2025-10-08 20:45:40,075 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-08 16:46:25] 2025-10-08 20:45:40,076 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-08 16:46:25] 2025-10-08 20:45:40,076 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-08 16:46:25] 2025-10-08 20:45:40,076 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-08 16:46:25] 2025-10-08 20:45:40,076 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-08 16:46:25] 2025-10-08 20:45:40,076 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-08 16:46:25] 2025-10-08 20:45:40,076 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-08 16:46:25] 2025-10-08 20:45:40,076 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-08 16:46:25] 2025-10-08 20:45:40,076 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-08 16:46:25] 2025-10-08 20:45:40,077 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-08 16:46:25] 2025-10-08 20:45:40,077 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-08 16:46:25] 2025-10-08 20:45:40,077 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-08 16:46:25] 2025-10-08 20:45:40,077 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-08 16:46:25] 2025-10-08 20:45:40,077 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-08 16:46:25] 2025-10-08 20:45:40,077 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-08 16:46:25] 2025-10-08 20:45:40,077 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-08 16:46:25] 2025-10-08 20:45:40,078 | INFO     | job 6826416365 has completed (purged errors)
[2025-10-08 16:46:25] 2025-10-08 20:45:40,078 | INFO     | overall cleanup function is called
[2025-10-08 16:46:25] 2025-10-08 20:45:41,084 | INFO     | --- collectZombieJob: --- 10, [2468873]
[2025-10-08 16:46:25] 2025-10-08 20:45:41,084 | INFO     | zombie collector waiting for pid 2468873
[2025-10-08 16:46:25] 2025-10-08 20:45:41,085 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-08 16:46:25] 2025-10-08 20:45:41,085 | INFO     | collected zombie processes
[2025-10-08 16:46:25] 2025-10-08 20:45:41,085 | INFO     | will attempt to kill all subprocesses of pid=2468873
[2025-10-08 16:46:25] 2025-10-08 20:45:41,608 | INFO     | process IDs to be killed: [2468873] (in reverse order)
[2025-10-08 16:46:25] 2025-10-08 20:45:41,733 | WARNING  | found no corresponding commands to process id(s)
[2025-10-08 16:46:25] 2025-10-08 20:45:41,734 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-08 16:46:25] 2025-10-08 20:45:41,748 | INFO     | did not find any defunct processes belonging to 2468873
[2025-10-08 16:46:25] 2025-10-08 20:45:41,760 | INFO     | did not find any defunct processes belonging to 2468873
[2025-10-08 16:46:25] 2025-10-08 20:45:41,760 | INFO     | ready for new job
[2025-10-08 16:46:25] 2025-10-08 20:45:41,761 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-08 16:46:25] 2025-10-08 20:45:41,763 | INFO     | ***************************************
[2025-10-08 16:46:25] 2025-10-08 20:45:41,763 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-08 16:46:25] 2025-10-08 20:45:41,763 | INFO     | ***************************************
[2025-10-08 16:46:25] 2025-10-08 20:45:41,763 | INFO     | 
[2025-10-08 16:46:25] 2025-10-08 20:45:41,767 | INFO     | architecture information:
[2025-10-08 16:46:25] 2025-10-08 20:45:41,767 | INFO     | executing command: cat /etc/os-release
[2025-10-08 16:46:25] 2025-10-08 20:45:41,783 | INFO     | cat /etc/os-release:
[2025-10-08 16:46:25] NAME="CentOS Linux"
[2025-10-08 16:46:25] VERSION="7 (Core)"
[2025-10-08 16:46:25] ID="centos"
[2025-10-08 16:46:25] ID_LIKE="rhel fedora"
[2025-10-08 16:46:25] VERSION_ID="7"
[2025-10-08 16:46:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-08 16:46:25] ANSI_COLOR="0;31"
[2025-10-08 16:46:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-08 16:46:25] HOME_URL="https://www.centos.org/"
[2025-10-08 16:46:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-08 16:46:25] 
[2025-10-08 16:46:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-08 16:46:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-08 16:46:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-08 16:46:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-08 16:46:25] 
[2025-10-08 16:46:25] 2025-10-08 20:45:41,784 | INFO     | ***************************************
[2025-10-08 16:46:25] 2025-10-08 20:45:42,287 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/8
[2025-10-08 16:46:25] 2025-10-08 20:45:42,302 | INFO     | sufficient remaining disk space (397365215232 B)
[2025-10-08 16:46:25] 2025-10-08 20:45:42,302 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-08 16:46:25] 2025-10-08 20:45:42,302 | INFO     | current server update state: UPDATING_FINAL
[2025-10-08 16:46:25] 2025-10-08 20:45:42,302 | INFO     | update_server=False
[2025-10-08 16:46:25] 2025-10-08 20:45:42,302 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-08 16:46:25] 2025-10-08 20:45:42,443 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-08 16:46:25] 2025-10-08 20:45:42,443 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-08 16:46:25] 2025-10-08 20:45:42,443 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-08 16:46:25] 2025-10-08 20:45:42,444 | INFO     | will abort loop
[2025-10-08 16:46:25] 2025-10-08 20:45:42,532 | INFO     | all data control threads have been joined
[2025-10-08 16:46:25] 2025-10-08 20:45:42,840 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-08 16:46:25] 2025-10-08 20:45:42,918 | INFO     | all job control threads have been joined
[2025-10-08 16:46:25] 2025-10-08 20:45:43,114 | INFO     | all payload control threads have been joined
[2025-10-08 16:46:25] 2025-10-08 20:45:43,308 | INFO     | [job] retrieve thread has finished
[2025-10-08 16:46:25] 2025-10-08 20:45:43,449 | INFO     | [job] job monitor thread has finished
[2025-10-08 16:46:25] 2025-10-08 20:45:43,537 | INFO     | [data] control thread has finished
[2025-10-08 16:46:25] 2025-10-08 20:45:43,542 | INFO     | [data] copytool_in thread has finished
[2025-10-08 16:46:25] 2025-10-08 20:45:43,812 | INFO     | [payload] execute_payloads thread has finished
[2025-10-08 16:46:25] 2025-10-08 20:45:43,923 | INFO     | [job] control thread has finished
[2025-10-08 16:46:25] 2025-10-08 20:45:43,992 | INFO     | [payload] failed_post thread has finished
[2025-10-08 16:46:25] 2025-10-08 20:45:44,120 | INFO     | [payload] control thread has finished
[2025-10-08 16:46:25] 2025-10-08 20:45:44,325 | INFO     | [job] validate thread has finished
[2025-10-08 16:46:25] 2025-10-08 20:45:44,467 | INFO     | [payload] validate_pre thread has finished
[2025-10-08 16:46:25] 2025-10-08 20:45:44,691 | INFO     | [job] create_data_payload thread has finished
[2025-10-08 16:46:25] 2025-10-08 20:45:44,751 | INFO     | [payload] validate_post thread has finished
[2025-10-08 16:46:25] 2025-10-08 20:45:44,845 | INFO     | [data] copytool_out thread has finished
[2025-10-08 16:46:25] 2025-10-08 20:45:44,856 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-08 16:46:25] 2025-10-08 20:45:45,435 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-08 16:46:25] 2025-10-08 20:45:45,862 | INFO     | [job] queue monitor thread has finished
[2025-10-08 16:46:25] 2025-10-08 20:45:49,440 | INFO     | [data] queue_monitor thread has finished
[2025-10-08 16:46:25] 2025-10-08 20:45:52,322 | INFO     | job.realtimelogging is not enabled
[2025-10-08 16:46:25] 2025-10-08 20:45:53,328 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-08 16:46:25] 2025-10-08 20:46:11,901 | INFO     | PID=2461919 has CPU usage=9.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-08 16:46:25] 2025-10-08 20:46:11,902 | INFO     | .. there are 15 such processes running
[2025-10-08 16:46:25] 2025-10-08 20:46:11,903 | INFO     | found 0 job(s) in 20 queues
[2025-10-08 16:46:25] 2025-10-08 20:46:11,903 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-08 16:46:25] 2025-10-08 20:46:11,903 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-08 16:46:25] 2025-10-08 20:46:20,421 | INFO     | [monitor] cgroup control has ended
[2025-10-08 16:46:25] 2025-10-08 20:46:20,653 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 131914044589888)>', '<ExcThread(monitor, started 131913402541824)>']
[2025-10-08 16:46:25] 2025-10-08 20:46:20,943 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-08 16:46:25] 2025-10-08 20:46:20,943 | INFO     | [monitor] control thread has ended
[2025-10-08 16:46:25] 2025-10-08 20:46:25,678 | INFO     | all workflow threads have been joined
[2025-10-08 16:46:25] 2025-10-08 20:46:25,678 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-08 16:46:25] 2025-10-08 20:46:25,678 | INFO     | traces error code: 0
[2025-10-08 16:46:25] 2025-10-08 20:46:25,679 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-08 16:46:25] 2025-10-08 20:46:25,787 [wrapper] ==== pilot stdout END ====
[2025-10-08 16:46:25] 2025-10-08 20:46:25,790 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-08 16:46:25] 2025-10-08 20:46:25,793 [wrapper] pilotpid: 2461919
[2025-10-08 16:46:25] 2025-10-08 20:46:25,795 [wrapper] Pilot exit status: 0
[2025-10-08 16:46:25] 2025-10-08 20:46:25,805 [wrapper] pandaids: 6826416365
[2025-10-08 16:46:25] 2025-10-08 20:46:25,882 [wrapper] cleanup supervisor_pilot 2967758 2461920
[2025-10-08 16:46:25] 2025-10-08 20:46:25,885 [wrapper] Test setup, not cleaning
[2025-10-08 16:46:25] 2025-10-08 20:46:25,888 [wrapper] apfmon messages muted
[2025-10-08 16:46:25] 2025-10-08 20:46:25,891 [wrapper] ==== wrapper stdout END ====
[2025-10-08 16:46:25] 2025-10-08 20:46:25,893 [wrapper] ==== wrapper stderr END ====
[2025-10-08 16:46:25]  *** Error codes and diagnostics ***
[2025-10-08 16:46:25]     "exeErrorCode": 0,
[2025-10-08 16:46:25]     "exeErrorDiag": "",
[2025-10-08 16:46:25]     "pilotErrorCode": 0,
[2025-10-08 16:46:25]     "pilotErrorDiag": "",
[2025-10-08 16:46:25]  *** Listing of results directory ***
[2025-10-08 16:46:25] total 406760
[2025-10-08 16:46:25] -rw-r--r-- 1 whitlerd whitlerd    552446 Oct  1 05:54 pilot3.tar.gz
[2025-10-08 16:46:25] -rw-r--r-- 1 whitlerd whitlerd      5112 Oct  1 05:56 queuedata.json
[2025-10-08 16:46:25] -rwx------ 1 whitlerd whitlerd     36292 Oct  1 05:56 runpilot2-wrapper.sh
[2025-10-08 16:46:25] -rw-rw-r-- 1 whitlerd whitlerd       100 Oct  8 13:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-08 16:46:25] -rwxr-xr-x 1 whitlerd whitlerd      7986 Oct  8 13:35 run_atlas
[2025-10-08 16:46:25] -rw-rw-r-- 1 whitlerd whitlerd       105 Oct  8 13:35 job.xml
[2025-10-08 16:46:25] -rw-r--r-- 2 whitlerd whitlerd 220113311 Oct  8 13:35 EVNT.46373045._002708.pool.root.1
[2025-10-08 16:46:25] -rw-r--r-- 2 whitlerd whitlerd     15120 Oct  8 13:35 start_atlas.sh
[2025-10-08 16:46:25] drwxrwx--x 2 whitlerd whitlerd      4096 Oct  8 13:35 shared
[2025-10-08 16:46:25] -rw-r--r-- 2 whitlerd whitlerd    565606 Oct  8 13:35 input.tar.gz
[2025-10-08 16:46:25] -rw-rw-r-- 1 whitlerd whitlerd      8956 Oct  8 13:35 init_data.xml
[2025-10-08 16:46:25] -rw-rw-r-- 1 whitlerd whitlerd         0 Oct  8 13:35 boinc_setup_complete
[2025-10-08 16:46:25] -rw-rw-r-- 1 whitlerd whitlerd         0 Oct  8 13:35 boinc_lockfile
[2025-10-08 16:46:25] -rw-rw-r-- 1 whitlerd whitlerd      2538 Oct  8 13:35 pandaJob.out
[2025-10-08 16:46:25] -rw------- 1 whitlerd whitlerd    979295 Oct  8 13:35 agis_schedconf.cvmfs.json
[2025-10-08 16:46:25] drwx------ 4 whitlerd whitlerd      4096 Oct  8 13:36 pilot3
[2025-10-08 16:46:25] -rw------- 1 whitlerd whitlerd 188579492 Oct  8 16:44 HITS.46373048._080482.pool.root.1
[2025-10-08 16:46:25] -rw-rw-r-- 1 whitlerd whitlerd       530 Oct  8 16:44 boinc_task_state.xml
[2025-10-08 16:46:25] -rw------- 1 whitlerd whitlerd      1032 Oct  8 16:45 memory_monitor_summary.json
[2025-10-08 16:46:25] -rw------- 1 whitlerd whitlerd   1560401 Oct  8 16:45 agis_ddmendpoints.agis.ALL.json
[2025-10-08 16:46:25] -rw------- 1 whitlerd whitlerd    362577 Oct  8 16:45 log.46373048._080482.job.log.tgz.1
[2025-10-08 16:46:25] -rw------- 1 whitlerd whitlerd      7787 Oct  8 16:45 heartbeat.json
[2025-10-08 16:46:25] -rw------- 1 whitlerd whitlerd        95 Oct  8 16:46 pilot_heartbeat.json
[2025-10-08 16:46:25] -rw-rw-r-- 1 whitlerd whitlerd      8192 Oct  8 16:46 boinc_mmap_file
[2025-10-08 16:46:25] -rw-rw-r-- 1 whitlerd whitlerd        28 Oct  8 16:46 wrapper_checkpoint.txt
[2025-10-08 16:46:25] -rw------- 1 whitlerd whitlerd      5097 Oct  8 16:46 pilotlog.txt
[2025-10-08 16:46:25] -rw------- 1 whitlerd whitlerd   1605051 Oct  8 16:46 log.46373048._080482.job.log.1
[2025-10-08 16:46:25] -rw------- 1 whitlerd whitlerd       357 Oct  8 16:46 output.list
[2025-10-08 16:46:25] -rw-rw-r-- 1 whitlerd whitlerd       620 Oct  8 16:46 runtime_log
[2025-10-08 16:46:25] -rw------- 1 whitlerd whitlerd   1986560 Oct  8 16:46 result.tar.gz
[2025-10-08 16:46:25] -rw-rw-r-- 1 whitlerd whitlerd      8879 Oct  8 16:46 runtime_log.err
[2025-10-08 16:46:25] -rw------- 1 whitlerd whitlerd       651 Oct  8 16:46 p6BMDmuk8N8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmihBNDmIHDDNn.diag
[2025-10-08 16:46:25] -rw-rw-r-- 1 whitlerd whitlerd     21161 Oct  8 16:46 stderr.txt
[2025-10-08 16:46:25] HITS file was successfully produced:
[2025-10-08 16:46:25] -rw------- 1 whitlerd whitlerd 188579492 Oct  8 16:44 shared/HITS.pool.root.1
[2025-10-08 16:46:25]  *** Contents of shared directory: ***
[2025-10-08 16:46:25] total 401636
[2025-10-08 16:46:25] -rw-r--r-- 2 whitlerd whitlerd 220113311 Oct  8 13:35 ATLAS.root_0
[2025-10-08 16:46:25] -rw-r--r-- 2 whitlerd whitlerd     15120 Oct  8 13:35 start_atlas.sh
[2025-10-08 16:46:25] -rw-r--r-- 2 whitlerd whitlerd    565606 Oct  8 13:35 input.tar.gz
[2025-10-08 16:46:25] -rw------- 1 whitlerd whitlerd 188579492 Oct  8 16:44 HITS.pool.root.1
[2025-10-08 16:46:25] -rw------- 1 whitlerd whitlerd   1986560 Oct  8 16:46 result.tar.gz
16:46:27 (2457888): run_atlas exited; CPU time 44376.572004
16:46:27 (2457888): called boinc_finish(0)

</stderr_txt>
]]>

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