Stderr output

<core_client_version>8.3.0</core_client_version>
<![CDATA[
<stderr_txt>
12:41:42 (2368073): wrapper (7.7.26015): starting
12:41:42 (2368073): wrapper: running run_atlas (--nthreads 4)
[2025-10-08 12:41:42] Arguments: --nthreads 4
[2025-10-08 12:41:42] Threads: 4
[2025-10-08 12:41:42] Checking for CVMFS
[2025-10-08 12:41:43] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 12:41:43] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 12:41:43] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 12:41:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 12:41:43] 2.13.2.0 3732220 1067 57236 151478 2 61 3335486 4096000 12824 130560 0 7052891 99.999 39001 732 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-08 12:41:43] CVMFS is ok
[2025-10-08 12:41:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-08 12:41:43] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-08 12:41:43] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-08 12:41:43] Further information can be found at the LHC@home message board.
[2025-10-08 12:41:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 12:41:43] Checking for apptainer binary...
[2025-10-08 12:41:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 12:41:43] Running /usr/bin/apptainer --version
[2025-10-08 12:41:43] apptainer version 1.4.3
[2025-10-08 12:41:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 12:41:43] T7810-Ubuntu
[2025-10-08 12:41:43] apptainer works
[2025-10-08 12:41:43] Set ATHENA_PROC_NUMBER=4
[2025-10-08 12:41:43] Set ATHENA_CORE_NUMBER=4
[2025-10-08 12:41:43] Starting ATLAS job with PandaID=6826041321
[2025-10-08 12:41:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/whitlerd/Desktop/BOINC/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-08 15:58:21]  *** The last 200 lines of the pilot log: ***
[2025-10-08 15:58:21] 2025-10-08 19:57:34,143 | INFO     | time since job start (11736s) is within the limit (172800.0s)
[2025-10-08 15:58:21] 2025-10-08 19:57:35,899 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-08 15:58:21] 2025-10-08 19:57:35,912 | INFO     | found 40 cores (20 cores per socket, 2 sockets) HT, CPU MHz: 2662.0262875000008
[2025-10-08 15:58:21] 2025-10-08 19:57:35,925 | INFO     | using path: /home/whitlerd/Desktop/BOINC/slots/11/PanDA_Pilot-6826041321/memory_monitor_summary.json (trf name=prmon)
[2025-10-08 15:58:21] 2025-10-08 19:57:35,926 | INFO     | extracted standard info from prmon json
[2025-10-08 15:58:21] 2025-10-08 19:57:35,926 | INFO     | extracted standard memory fields from prmon json
[2025-10-08 15:58:21] 2025-10-08 19:57:35,926 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-08 15:58:21] 2025-10-08 19:57:35,926 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-08 15:58:21] 2025-10-08 19:57:35,926 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-08 15:58:21] 2025-10-08 19:57:35,931 | INFO     | fitting pss+swap vs Time
[2025-10-08 15:58:21] 2025-10-08 19:57:35,931 | INFO     | sum of square deviations: 2194675568.0
[2025-10-08 15:58:21] 2025-10-08 19:57:35,933 | INFO     | sum of deviations: -1972024775.0
[2025-10-08 15:58:21] 2025-10-08 19:57:35,933 | INFO     | mean x: 1759947571.5
[2025-10-08 15:58:21] 2025-10-08 19:57:35,933 | INFO     | mean y: 2322776.375
[2025-10-08 15:58:21] 2025-10-08 19:57:35,933 | INFO     | -- intersect: 1583722899.6113853
[2025-10-08 15:58:21] 2025-10-08 19:57:35,933 | INFO     | intersect: 1583722899.6113853
[2025-10-08 15:58:21] 2025-10-08 19:57:35,934 | INFO     | chi2: 1.8650633675900357
[2025-10-08 15:58:21] 2025-10-08 19:57:35,934 | INFO     | sum of square deviations: 2027639878.0
[2025-10-08 15:58:21] 2025-10-08 19:57:35,935 | INFO     | sum of deviations: -1826165112.9999971
[2025-10-08 15:58:21] 2025-10-08 19:57:35,936 | INFO     | mean x: 1759947419.0
[2025-10-08 15:58:21] 2025-10-08 19:57:35,936 | INFO     | mean y: 2322909.6363636362
[2025-10-08 15:58:21] 2025-10-08 19:57:35,936 | INFO     | -- intersect: 1587394604.153603
[2025-10-08 15:58:21] 2025-10-08 19:57:35,936 | INFO     | intersect: 1587394604.153603
[2025-10-08 15:58:21] 2025-10-08 19:57:35,936 | INFO     | chi2: 1.865051070282047
[2025-10-08 15:58:21] 2025-10-08 19:57:35,936 | INFO     | current chi2=1.865051070282047 (change=0.0006593506795677217 %)
[2025-10-08 15:58:21] 2025-10-08 19:57:35,937 | INFO     | right removable region: 186
[2025-10-08 15:58:21] 2025-10-08 19:57:35,937 | INFO     | sum of square deviations: 2027639878.0
[2025-10-08 15:58:21] 2025-10-08 19:57:35,938 | INFO     | sum of deviations: -31643124140.0
[2025-10-08 15:58:21] 2025-10-08 19:57:35,938 | INFO     | mean x: 1759947724.0
[2025-10-08 15:58:21] 2025-10-08 19:57:35,939 | INFO     | mean y: 2349568.604278075
[2025-10-08 15:58:21] 2025-10-08 19:57:35,939 | INFO     | -- intersect: 27467899499.18345
[2025-10-08 15:58:21] 2025-10-08 19:57:35,939 | INFO     | intersect: 27467899499.18345
[2025-10-08 15:58:21] 2025-10-08 19:57:35,939 | INFO     | chi2: 0.22078842534563475
[2025-10-08 15:58:21] 2025-10-08 19:57:35,939 | INFO     | current chi2=0.22078842534563475 (change=88.1618807606023 %)
[2025-10-08 15:58:21] 2025-10-08 19:57:35,940 | INFO     | sum of square deviations: 1869302025.5
[2025-10-08 15:58:21] 2025-10-08 19:57:35,941 | INFO     | sum of deviations: -26420108391.0
[2025-10-08 15:58:21] 2025-10-08 19:57:35,941 | INFO     | mean x: 1759947876.5
[2025-10-08 15:58:21] 2025-10-08 19:57:35,941 | INFO     | mean y: 2344512.241758242
[2025-10-08 15:58:21] 2025-10-08 19:57:35,941 | INFO     | -- intersect: 24876876837.85833
[2025-10-08 15:58:21] 2025-10-08 19:57:35,942 | INFO     | intersect: 24876876837.85833
[2025-10-08 15:58:21] 2025-10-08 19:57:35,942 | INFO     | chi2: 0.20903234622085953
[2025-10-08 15:58:21] 2025-10-08 19:57:35,942 | INFO     | current chi2=0.20903234622085953 (change=5.324590320516841 %)
[2025-10-08 15:58:21] 2025-10-08 19:57:35,942 | INFO     | left removable region: 20
[2025-10-08 15:58:21] 2025-10-08 19:57:35,943 | INFO     | sum of square deviations: 1418361477.5
[2025-10-08 15:58:21] 2025-10-08 19:57:35,944 | INFO     | sum of deviations: -10769469724.0
[2025-10-08 15:58:21] 2025-10-08 19:57:35,944 | INFO     | mean x: 1759947998.5
[2025-10-08 15:58:21] 2025-10-08 19:57:35,944 | INFO     | mean y: 2328842.1445783135
[2025-10-08 15:58:21] 2025-10-08 19:57:35,944 | INFO     | -- intersect: 13365429142.265461
[2025-10-08 15:58:21] 2025-10-08 19:57:35,944 | INFO     | intersect: 13365429142.265461
[2025-10-08 15:58:21] 2025-10-08 19:57:35,945 | INFO     | chi2: 0.12309718985414352
[2025-10-08 15:58:21] 2025-10-08 19:57:35,945 | INFO     | -- intersect: 13365429142.265461
[2025-10-08 15:58:21] 2025-10-08 19:57:35,945 | INFO     | current memory leak: -7.59 B/s (using 166 data points, chi2=0.12)
[2025-10-08 15:58:21] 2025-10-08 19:57:35,945 | INFO     | could have reported an average CPU frequency of 2747 MHz (10 samples)
[2025-10-08 15:58:21] 2025-10-08 19:57:35,946 | INFO     | ..............................
[2025-10-08 15:58:21] 2025-10-08 19:57:35,946 | INFO     | . Timing measurements:
[2025-10-08 15:58:21] 2025-10-08 19:57:35,946 | INFO     | . get job = 0 s
[2025-10-08 15:58:21] 2025-10-08 19:57:35,946 | INFO     | . initial setup = 4 s
[2025-10-08 15:58:21] 2025-10-08 19:57:35,946 | INFO     | . payload setup = 6 s
[2025-10-08 15:58:21] 2025-10-08 19:57:35,946 | INFO     | . stage-in = 0 s
[2025-10-08 15:58:21] 2025-10-08 19:57:35,946 | INFO     | . payload execution = 11701 s
[2025-10-08 15:58:21] 2025-10-08 19:57:35,947 | INFO     | . stage-out = 3 s
[2025-10-08 15:58:21] 2025-10-08 19:57:35,947 | INFO     | . log creation = 0 s
[2025-10-08 15:58:21] 2025-10-08 19:57:35,947 | INFO     | ..............................
[2025-10-08 15:58:21] 2025-10-08 19:57:36,086 | INFO     | 
[2025-10-08 15:58:21] 2025-10-08 19:57:36,086 | INFO     | job summary report
[2025-10-08 15:58:21] 2025-10-08 19:57:36,086 | INFO     | --------------------------------------------------
[2025-10-08 15:58:21] 2025-10-08 19:57:36,086 | INFO     | PanDA job id: 6826041321
[2025-10-08 15:58:21] 2025-10-08 19:57:36,086 | INFO     | task id: 46373048
[2025-10-08 15:58:21] 2025-10-08 19:57:36,086 | INFO     | errors: (none)
[2025-10-08 15:58:21] 2025-10-08 19:57:36,086 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-08 15:58:21] 2025-10-08 19:57:36,087 | INFO     | pilot state: finished 
[2025-10-08 15:58:21] 2025-10-08 19:57:36,087 | INFO     | transexitcode: 0
[2025-10-08 15:58:21] 2025-10-08 19:57:36,087 | INFO     | exeerrorcode: 0
[2025-10-08 15:58:21] 2025-10-08 19:57:36,087 | INFO     | exeerrordiag: 
[2025-10-08 15:58:21] 2025-10-08 19:57:36,087 | INFO     | exitcode: 0
[2025-10-08 15:58:21] 2025-10-08 19:57:36,087 | INFO     | exitmsg: OK
[2025-10-08 15:58:21] 2025-10-08 19:57:36,087 | INFO     | cpuconsumptiontime: 45137 s
[2025-10-08 15:58:21] 2025-10-08 19:57:36,087 | INFO     | nevents: 400
[2025-10-08 15:58:21] 2025-10-08 19:57:36,087 | INFO     | neventsw: 0
[2025-10-08 15:58:21] 2025-10-08 19:57:36,088 | INFO     | pid: 2379045
[2025-10-08 15:58:21] 2025-10-08 19:57:36,088 | INFO     | pgrp: 2379045
[2025-10-08 15:58:21] 2025-10-08 19:57:36,088 | INFO     | corecount: 4
[2025-10-08 15:58:21] 2025-10-08 19:57:36,088 | INFO     | event service: False
[2025-10-08 15:58:21] 2025-10-08 19:57:36,088 | INFO     | sizes: {0: 2348685, 1: 2348884, 6: 2349146, 12: 2349174, 11711: 2378457, 11715: 2387485, 11716: 2387669, 11722: 2387863}
[2025-10-08 15:58:21] 2025-10-08 19:57:36,088 | INFO     | --------------------------------------------------
[2025-10-08 15:58:21] 2025-10-08 19:57:36,088 | INFO     | 
[2025-10-08 15:58:21] 2025-10-08 19:57:36,088 | INFO     | executing command: ls -lF /home/whitlerd/Desktop/BOINC/slots/11
[2025-10-08 15:58:21] 2025-10-08 19:57:36,109 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-08 15:58:21] 2025-10-08 19:57:36,109 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-08 15:58:21] 2025-10-08 19:57:36,110 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-08 15:58:21] 2025-10-08 19:57:36,110 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-08 15:58:21] 2025-10-08 19:57:36,110 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-08 15:58:21] 2025-10-08 19:57:36,110 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-08 15:58:21] 2025-10-08 19:57:36,110 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-08 15:58:21] 2025-10-08 19:57:36,110 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-08 15:58:21] 2025-10-08 19:57:36,110 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-08 15:58:21] 2025-10-08 19:57:36,111 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-08 15:58:21] 2025-10-08 19:57:36,111 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-08 15:58:21] 2025-10-08 19:57:36,111 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-08 15:58:21] 2025-10-08 19:57:36,111 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-08 15:58:21] 2025-10-08 19:57:36,111 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-08 15:58:21] 2025-10-08 19:57:36,111 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-08 15:58:21] 2025-10-08 19:57:36,111 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-08 15:58:21] 2025-10-08 19:57:36,111 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-08 15:58:21] 2025-10-08 19:57:36,111 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-08 15:58:21] 2025-10-08 19:57:36,112 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-08 15:58:21] 2025-10-08 19:57:36,112 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-08 15:58:21] 2025-10-08 19:57:36,112 | INFO     | job 6826041321 has completed (purged errors)
[2025-10-08 15:58:21] 2025-10-08 19:57:36,112 | INFO     | overall cleanup function is called
[2025-10-08 15:58:21] 2025-10-08 19:57:37,120 | INFO     | --- collectZombieJob: --- 10, [2379045]
[2025-10-08 15:58:21] 2025-10-08 19:57:37,120 | INFO     | zombie collector waiting for pid 2379045
[2025-10-08 15:58:21] 2025-10-08 19:57:37,120 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-08 15:58:21] 2025-10-08 19:57:37,120 | INFO     | collected zombie processes
[2025-10-08 15:58:21] 2025-10-08 19:57:37,120 | INFO     | will attempt to kill all subprocesses of pid=2379045
[2025-10-08 15:58:21] 2025-10-08 19:57:37,637 | INFO     | process IDs to be killed: [2379045] (in reverse order)
[2025-10-08 15:58:21] 2025-10-08 19:57:37,756 | WARNING  | found no corresponding commands to process id(s)
[2025-10-08 15:58:21] 2025-10-08 19:57:37,757 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-08 15:58:21] 2025-10-08 19:57:37,770 | INFO     | did not find any defunct processes belonging to 2379045
[2025-10-08 15:58:21] 2025-10-08 19:57:37,780 | INFO     | did not find any defunct processes belonging to 2379045
[2025-10-08 15:58:21] 2025-10-08 19:57:37,781 | INFO     | ready for new job
[2025-10-08 15:58:21] 2025-10-08 19:57:37,781 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-08 15:58:21] 2025-10-08 19:57:37,783 | INFO     | ***************************************
[2025-10-08 15:58:21] 2025-10-08 19:57:37,784 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-08 15:58:21] 2025-10-08 19:57:37,784 | INFO     | ***************************************
[2025-10-08 15:58:21] 2025-10-08 19:57:37,784 | INFO     | 
[2025-10-08 15:58:21] 2025-10-08 19:57:37,787 | INFO     | architecture information:
[2025-10-08 15:58:21] 2025-10-08 19:57:37,788 | INFO     | executing command: cat /etc/os-release
[2025-10-08 15:58:21] 2025-10-08 19:57:37,801 | INFO     | cat /etc/os-release:
[2025-10-08 15:58:21] NAME="CentOS Linux"
[2025-10-08 15:58:21] VERSION="7 (Core)"
[2025-10-08 15:58:21] ID="centos"
[2025-10-08 15:58:21] ID_LIKE="rhel fedora"
[2025-10-08 15:58:21] VERSION_ID="7"
[2025-10-08 15:58:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-08 15:58:21] ANSI_COLOR="0;31"
[2025-10-08 15:58:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-08 15:58:21] HOME_URL="https://www.centos.org/"
[2025-10-08 15:58:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-08 15:58:21] 
[2025-10-08 15:58:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-08 15:58:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-08 15:58:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-08 15:58:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-08 15:58:21] 
[2025-10-08 15:58:21] 2025-10-08 19:57:37,802 | INFO     | ***************************************
[2025-10-08 15:58:21] 2025-10-08 19:57:38,304 | INFO     | executing command: df -mP /home/whitlerd/Desktop/BOINC/slots/11
[2025-10-08 15:58:21] 2025-10-08 19:57:38,319 | INFO     | sufficient remaining disk space (397238337536 B)
[2025-10-08 15:58:21] 2025-10-08 19:57:38,320 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-08 15:58:21] 2025-10-08 19:57:38,320 | INFO     | current server update state: UPDATING_FINAL
[2025-10-08 15:58:21] 2025-10-08 19:57:38,320 | INFO     | update_server=False
[2025-10-08 15:58:21] 2025-10-08 19:57:38,320 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-08 15:58:21] 2025-10-08 19:57:38,479 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-08 15:58:21] 2025-10-08 19:57:38,479 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-08 15:58:21] 2025-10-08 19:57:38,479 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-08 15:58:21] 2025-10-08 19:57:38,480 | INFO     | will abort loop
[2025-10-08 15:58:21] 2025-10-08 19:57:39,325 | INFO     | [job] retrieve thread has finished
[2025-10-08 15:58:21] 2025-10-08 19:57:39,331 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-08 15:58:21] 2025-10-08 19:57:39,350 | INFO     | all data control threads have been joined
[2025-10-08 15:58:21] 2025-10-08 19:57:39,424 | INFO     | all job control threads have been joined
[2025-10-08 15:58:21] 2025-10-08 19:57:39,426 | INFO     | [payload] validate_post thread has finished
[2025-10-08 15:58:21] 2025-10-08 19:57:39,484 | INFO     | [job] job monitor thread has finished
[2025-10-08 15:58:21] 2025-10-08 19:57:39,519 | INFO     | all payload control threads have been joined
[2025-10-08 15:58:21] 2025-10-08 19:57:39,621 | INFO     | [data] copytool_in thread has finished
[2025-10-08 15:58:21] 2025-10-08 19:57:39,635 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-08 15:58:21] 2025-10-08 19:57:40,051 | INFO     | [payload] execute_payloads thread has finished
[2025-10-08 15:58:21] 2025-10-08 19:57:40,306 | INFO     | [payload] failed_post thread has finished
[2025-10-08 15:58:21] 2025-10-08 19:57:40,353 | INFO     | [data] control thread has finished
[2025-10-08 15:58:21] 2025-10-08 19:57:40,427 | INFO     | [job] validate thread has finished
[2025-10-08 15:58:21] 2025-10-08 19:57:40,429 | INFO     | [job] control thread has finished
[2025-10-08 15:58:21] 2025-10-08 19:57:40,522 | INFO     | [payload] control thread has finished
[2025-10-08 15:58:21] 2025-10-08 19:57:40,709 | INFO     | [job] create_data_payload thread has finished
[2025-10-08 15:58:21] 2025-10-08 19:57:40,743 | INFO     | [payload] validate_pre thread has finished
[2025-10-08 15:58:21] 2025-10-08 19:57:41,041 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-08 15:58:21] 2025-10-08 19:57:41,068 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-08 15:58:21] 2025-10-08 19:57:41,637 | INFO     | [data] copytool_out thread has finished
[2025-10-08 15:58:21] 2025-10-08 19:57:42,073 | INFO     | [job] queue monitor thread has finished
[2025-10-08 15:58:21] 2025-10-08 19:57:45,046 | INFO     | [data] queue_monitor thread has finished
[2025-10-08 15:58:21] 2025-10-08 19:58:07,732 | INFO     | PID=2372098 has CPU usage=3.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-08 15:58:21] 2025-10-08 19:58:07,732 | INFO     | .. there are 16 such processes running
[2025-10-08 15:58:21] 2025-10-08 19:58:07,733 | INFO     | found 0 job(s) in 20 queues
[2025-10-08 15:58:21] 2025-10-08 19:58:07,733 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-08 15:58:21] 2025-10-08 19:58:07,733 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-08 15:58:21] 2025-10-08 19:58:15,715 | INFO     | [monitor] cgroup control has ended
[2025-10-08 15:58:21] 2025-10-08 19:58:15,815 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139498711639872)>', '<ExcThread(monitor, started 139498214106880)>']
[2025-10-08 15:58:21] 2025-10-08 19:58:16,771 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-08 15:58:21] 2025-10-08 19:58:16,771 | INFO     | [monitor] control thread has ended
[2025-10-08 15:58:21] 2025-10-08 19:58:20,840 | INFO     | all workflow threads have been joined
[2025-10-08 15:58:21] 2025-10-08 19:58:20,840 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-08 15:58:21] 2025-10-08 19:58:20,840 | INFO     | traces error code: 0
[2025-10-08 15:58:21] 2025-10-08 19:58:20,841 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-08 15:58:21] 2025-10-08 19:58:20,954 [wrapper] ==== pilot stdout END ====
[2025-10-08 15:58:21] 2025-10-08 19:58:20,957 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-08 15:58:21] 2025-10-08 19:58:20,960 [wrapper] pilotpid: 2372098
[2025-10-08 15:58:21] 2025-10-08 19:58:20,963 [wrapper] Pilot exit status: 0
[2025-10-08 15:58:21] 2025-10-08 19:58:20,973 [wrapper] pandaids: 6826041321
[2025-10-08 15:58:21] 2025-10-08 19:58:21,047 [wrapper] cleanup supervisor_pilot 2885032 2372099
[2025-10-08 15:58:21] 2025-10-08 19:58:21,050 [wrapper] Test setup, not cleaning
[2025-10-08 15:58:21] 2025-10-08 19:58:21,053 [wrapper] apfmon messages muted
[2025-10-08 15:58:21] 2025-10-08 19:58:21,056 [wrapper] ==== wrapper stdout END ====
[2025-10-08 15:58:21] 2025-10-08 19:58:21,059 [wrapper] ==== wrapper stderr END ====
[2025-10-08 15:58:21]  *** Error codes and diagnostics ***
[2025-10-08 15:58:21]     "exeErrorCode": 0,
[2025-10-08 15:58:21]     "exeErrorDiag": "",
[2025-10-08 15:58:21]     "pilotErrorCode": 0,
[2025-10-08 15:58:21]     "pilotErrorDiag": "",
[2025-10-08 15:58:21]  *** Listing of results directory ***
[2025-10-08 15:58:21] total 413312
[2025-10-08 15:58:21] -rw-r--r-- 1 whitlerd whitlerd    552446 Sep 30 09:41 pilot3.tar.gz
[2025-10-08 15:58:21] -rw-r--r-- 1 whitlerd whitlerd      5112 Sep 30 09:56 queuedata.json
[2025-10-08 15:58:21] -rwx------ 1 whitlerd whitlerd     36292 Sep 30 09:58 runpilot2-wrapper.sh
[2025-10-08 15:58:21] -rw-rw-r-- 1 whitlerd whitlerd       100 Oct  8 12:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-08 15:58:21] -rwxr-xr-x 1 whitlerd whitlerd      7986 Oct  8 12:41 run_atlas
[2025-10-08 15:58:21] -rw-rw-r-- 1 whitlerd whitlerd       105 Oct  8 12:41 job.xml
[2025-10-08 15:58:21] -rw-r--r-- 2 whitlerd whitlerd 218919926 Oct  8 12:41 EVNT.46373045._001955.pool.root.1
[2025-10-08 15:58:21] -rw-r--r-- 2 whitlerd whitlerd     15120 Oct  8 12:41 start_atlas.sh
[2025-10-08 15:58:21] drwxrwx--x 2 whitlerd whitlerd      4096 Oct  8 12:41 shared
[2025-10-08 15:58:21] -rw-r--r-- 2 whitlerd whitlerd    565611 Oct  8 12:41 input.tar.gz
[2025-10-08 15:58:21] -rw-rw-r-- 1 whitlerd whitlerd         0 Oct  8 12:41 boinc_setup_complete
[2025-10-08 15:58:21] -rw-rw-r-- 1 whitlerd whitlerd      8957 Oct  8 12:41 init_data.xml
[2025-10-08 15:58:21] -rw-rw-r-- 1 whitlerd whitlerd         0 Oct  8 12:41 boinc_lockfile
[2025-10-08 15:58:21] -rw-rw-r-- 1 whitlerd whitlerd      2538 Oct  8 12:41 pandaJob.out
[2025-10-08 15:58:21] -rw------- 1 whitlerd whitlerd    979303 Oct  8 12:41 agis_schedconf.cvmfs.json
[2025-10-08 15:58:21] drwx------ 4 whitlerd whitlerd      4096 Oct  8 12:41 pilot3
[2025-10-08 15:58:21] -rw-rw-r-- 1 whitlerd whitlerd       531 Oct  8 15:56 boinc_task_state.xml
[2025-10-08 15:58:21] -rw------- 1 whitlerd whitlerd 196350822 Oct  8 15:56 HITS.46373048._061663.pool.root.1
[2025-10-08 15:58:21] -rw------- 1 whitlerd whitlerd      1033 Oct  8 15:57 memory_monitor_summary.json
[2025-10-08 15:58:21] -rw------- 1 whitlerd whitlerd   1560401 Oct  8 15:57 agis_ddmendpoints.agis.ALL.json
[2025-10-08 15:58:21] -rw------- 1 whitlerd whitlerd    376595 Oct  8 15:57 log.46373048._061663.job.log.tgz.1
[2025-10-08 15:58:21] -rw------- 1 whitlerd whitlerd      7788 Oct  8 15:57 heartbeat.json
[2025-10-08 15:58:21] -rw------- 1 whitlerd whitlerd        95 Oct  8 15:58 pilot_heartbeat.json
[2025-10-08 15:58:21] -rw-rw-r-- 1 whitlerd whitlerd        28 Oct  8 15:58 wrapper_checkpoint.txt
[2025-10-08 15:58:21] -rw-rw-r-- 1 whitlerd whitlerd      8192 Oct  8 15:58 boinc_mmap_file
[2025-10-08 15:58:21] -rw------- 1 whitlerd whitlerd      5026 Oct  8 15:58 pilotlog.txt
[2025-10-08 15:58:21] -rw------- 1 whitlerd whitlerd   1654971 Oct  8 15:58 log.46373048._061663.job.log.1
[2025-10-08 15:58:21] -rw------- 1 whitlerd whitlerd       357 Oct  8 15:58 output.list
[2025-10-08 15:58:21] -rw-rw-r-- 1 whitlerd whitlerd       620 Oct  8 15:58 runtime_log
[2025-10-08 15:58:21] -rw------- 1 whitlerd whitlerd   2048000 Oct  8 15:58 result.tar.gz
[2025-10-08 15:58:21] -rw-rw-r-- 1 whitlerd whitlerd      8893 Oct  8 15:58 runtime_log.err
[2025-10-08 15:58:21] -rw------- 1 whitlerd whitlerd       651 Oct  8 15:58 CXMMDmB3pN8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmEF8MDmKviCgn.diag
[2025-10-08 15:58:21] -rw-rw-r-- 1 whitlerd whitlerd     21210 Oct  8 15:58 stderr.txt
[2025-10-08 15:58:21] HITS file was successfully produced:
[2025-10-08 15:58:21] -rw------- 1 whitlerd whitlerd 196350822 Oct  8 15:56 shared/HITS.pool.root.1
[2025-10-08 15:58:21]  *** Contents of shared directory: ***
[2025-10-08 15:58:21] total 408124
[2025-10-08 15:58:21] -rw-r--r-- 2 whitlerd whitlerd 218919926 Oct  8 12:41 ATLAS.root_0
[2025-10-08 15:58:21] -rw-r--r-- 2 whitlerd whitlerd     15120 Oct  8 12:41 start_atlas.sh
[2025-10-08 15:58:21] -rw-r--r-- 2 whitlerd whitlerd    565611 Oct  8 12:41 input.tar.gz
[2025-10-08 15:58:21] -rw------- 1 whitlerd whitlerd 196350822 Oct  8 15:56 HITS.pool.root.1
[2025-10-08 15:58:21] -rw------- 1 whitlerd whitlerd   2048000 Oct  8 15:58 result.tar.gz
15:58:23 (2368073): run_atlas exited; CPU time 45710.009425
15:58:23 (2368073): called boinc_finish(0)

</stderr_txt>
]]>

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