Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
12:10:21 (823956): wrapper (7.7.26015): starting
12:10:21 (823956): wrapper: running run_atlas (--nthreads 11)
[2025-10-08 12:10:21] Arguments: --nthreads 11
[2025-10-08 12:10:21] Threads: 11
[2025-10-08 12:10:21] Checking for CVMFS
[2025-10-08 12:10:21] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 12:10:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 12:10:22] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 12:10:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 12:10:22] 2.13.1.0 5004 142 105392 151477 2 365 26376132 40960001 22025 16776704 0 1164637 99.473 970982 31182 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-08 12:10:22] CVMFS is ok
[2025-10-08 12:10:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-08 12:10:22] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-08 12:10:22] Further information can be found at the LHC@home message board.
[2025-10-08 12:10:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 12:10:22] Checking for apptainer binary...
[2025-10-08 12:10:22] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 12:10:22] Running /usr/bin/apptainer --version
[2025-10-08 12:10:23] apptainer version 1.4.3-1.el9
[2025-10-08 12:10:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 12:10:24] c-212-12.aglt2.org
[2025-10-08 12:10:24] apptainer works
[2025-10-08 12:10:24] Set ATHENA_PROC_NUMBER=11
[2025-10-08 12:10:24] Set ATHENA_CORE_NUMBER=11
[2025-10-08 12:10:24] Starting ATLAS job with PandaID=6831429408
[2025-10-08 12:10:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-08 13:52:03]  *** The last 200 lines of the pilot log: ***
[2025-10-08 13:52:03]  storage_token=
[2025-10-08 13:52:03]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6831429408/log.46376905._084167.job.log.tgz.1
[2025-10-08 13:52:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a4/d5/log.46376905._084167.job.log.tgz.1
[2025-10-08 13:52:03]  workdir=None
[2025-10-08 13:52:03] ]
[2025-10-08 13:52:03] 2025-10-08 17:50:56,290 | INFO     | transferring file log.46376905._084167.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6831429408/log.46376905._084167.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-08 13:52:03] 2025-10-08 17:50:56,291 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6831429408/log.46376905._084167.job.log.tgz.1 /tmp/boinchome/slots/0/log.46376905._084167.job
[2025-10-08 13:52:03] 2025-10-08 17:50:56,318 | INFO     | adding to output.list: log.46376905._084167.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a4/d5/log.46376905._084167.job.log.tg
[2025-10-08 13:52:03] 2025-10-08 17:50:56,319 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-08 13:52:03] 2025-10-08 17:50:56,320 | INFO     | summary of transferred files:
[2025-10-08 13:52:03] 2025-10-08 17:50:56,320 | INFO     |  -- lfn=log.46376905._084167.job.log.tgz.1, status_code=0, status=transferred
[2025-10-08 13:52:03] 2025-10-08 17:50:56,320 | INFO     | stage-out finished correctly
[2025-10-08 13:52:03] 2025-10-08 17:50:56,618 | INFO     | time since job start (6009s) is within the limit (172800.0s)
[2025-10-08 13:52:03] 2025-10-08 17:50:58,625 | INFO     | time since job start (6011s) is within the limit (172800.0s)
[2025-10-08 13:52:03] 2025-10-08 17:50:58,674 | INFO     | monitor loop #439: job 0:6831429408 is in state 'finished'
[2025-10-08 13:52:03] 2025-10-08 17:50:58,674 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 13:52:03] 2025-10-08 17:50:59,778 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-08 13:52:03] 2025-10-08 17:51:00,631 | INFO     | time since job start (6013s) is within the limit (172800.0s)
[2025-10-08 13:52:03] 2025-10-08 17:51:01,177 | INFO     | monitor loop #440: job 0:6831429408 is in state 'finished'
[2025-10-08 13:52:03] 2025-10-08 17:51:01,177 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 13:52:03] 2025-10-08 17:51:02,009 | INFO     | job 6831429408 has state=finished
[2025-10-08 13:52:03] 2025-10-08 17:51:02,009 | INFO     | preparing for final server update for job 6831429408 in state='finished'
[2025-10-08 13:52:03] 2025-10-08 17:51:02,010 | INFO     | this job has now completed (state=finished)
[2025-10-08 13:52:03] 2025-10-08 17:51:02,010 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-08 13:52:03] 2025-10-08 17:51:02,010 | INFO     | log transfer has been attempted: DONE
[2025-10-08 13:52:03] 2025-10-08 17:51:02,010 | INFO     | job 6831429408 has finished - writing final server update
[2025-10-08 13:52:03] 2025-10-08 17:51:02,011 | INFO     | total number of processed events: 400 (read)
[2025-10-08 13:52:03] 2025-10-08 17:51:02,012 | INFO     | executing command: lscpu
[2025-10-08 13:52:03] 2025-10-08 17:51:02,077 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-08 13:52:03] 2025-10-08 17:51:02,638 | INFO     | time since job start (6015s) is within the limit (172800.0s)
[2025-10-08 13:52:03] 2025-10-08 17:51:03,682 | INFO     | monitor loop #441: job 0:6831429408 is in state 'finished'
[2025-10-08 13:52:03] 2025-10-08 17:51:03,684 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 13:52:03] 2025-10-08 17:51:04,644 | INFO     | time since job start (6017s) is within the limit (172800.0s)
[2025-10-08 13:52:03] 2025-10-08 17:51:06,193 | INFO     | monitor loop #442: job 0:6831429408 is in state 'finished'
[2025-10-08 13:52:03] 2025-10-08 17:51:06,193 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 13:52:03] 2025-10-08 17:51:06,650 | INFO     | time since job start (6019s) is within the limit (172800.0s)
[2025-10-08 13:52:03] 2025-10-08 17:51:06,930 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-08 13:52:03] 2025-10-08 17:51:06,936 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 2941.902260416667
[2025-10-08 13:52:03] 2025-10-08 17:51:06,951 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6831429408/memory_monitor_summary.json (trf name=prmon)
[2025-10-08 13:52:03] 2025-10-08 17:51:06,951 | INFO     | extracted standard info from prmon json
[2025-10-08 13:52:03] 2025-10-08 17:51:06,951 | INFO     | extracted standard memory fields from prmon json
[2025-10-08 13:52:03] 2025-10-08 17:51:06,951 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-08 13:52:03] 2025-10-08 17:51:06,952 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-08 13:52:03] 2025-10-08 17:51:06,952 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-08 13:52:03] 2025-10-08 17:51:06,954 | INFO     | fitting pss+swap vs Time
[2025-10-08 13:52:03] 2025-10-08 17:51:06,954 | INFO     | sum of square deviations: 233641590.0
[2025-10-08 13:52:03] 2025-10-08 17:51:06,954 | INFO     | sum of deviations: -2480224132.0
[2025-10-08 13:52:03] 2025-10-08 17:51:06,954 | INFO     | mean x: 1759942942.0
[2025-10-08 13:52:03] 2025-10-08 17:51:06,955 | INFO     | mean y: 2702761.5604395606
[2025-10-08 13:52:03] 2025-10-08 17:51:06,955 | INFO     | -- intersect: 18685390872.403534
[2025-10-08 13:52:03] 2025-10-08 17:51:06,955 | INFO     | intersect: 18685390872.403534
[2025-10-08 13:52:03] 2025-10-08 17:51:06,955 | INFO     | chi2: 0.06501954516358698
[2025-10-08 13:52:03] 2025-10-08 17:51:06,955 | INFO     | -- intersect: 18685390872.403534
[2025-10-08 13:52:03] 2025-10-08 17:51:06,955 | INFO     | current memory leak: -10.62 B/s (using 91 data points, chi2=0.07)
[2025-10-08 13:52:03] 2025-10-08 17:51:06,955 | INFO     | could have reported an average CPU frequency of 2936 MHz (7 samples)
[2025-10-08 13:52:03] 2025-10-08 17:51:06,956 | INFO     | ..............................
[2025-10-08 13:52:03] 2025-10-08 17:51:06,956 | INFO     | . Timing measurements:
[2025-10-08 13:52:03] 2025-10-08 17:51:06,956 | INFO     | . get job = 0 s
[2025-10-08 13:52:03] 2025-10-08 17:51:06,956 | INFO     | . initial setup = 3 s
[2025-10-08 13:52:03] 2025-10-08 17:51:06,956 | INFO     | . payload setup = 13 s
[2025-10-08 13:52:03] 2025-10-08 17:51:06,956 | INFO     | . stage-in = 0 s
[2025-10-08 13:52:03] 2025-10-08 17:51:06,956 | INFO     | . payload execution = 5968 s
[2025-10-08 13:52:03] 2025-10-08 17:51:06,956 | INFO     | . stage-out = 0 s
[2025-10-08 13:52:03] 2025-10-08 17:51:06,956 | INFO     | . log creation = 0 s
[2025-10-08 13:52:03] 2025-10-08 17:51:06,956 | INFO     | ..............................
[2025-10-08 13:52:03] 2025-10-08 17:51:07,032 | INFO     | 
[2025-10-08 13:52:03] 2025-10-08 17:51:07,032 | INFO     | job summary report
[2025-10-08 13:52:03] 2025-10-08 17:51:07,032 | INFO     | --------------------------------------------------
[2025-10-08 13:52:03] 2025-10-08 17:51:07,033 | INFO     | PanDA job id: 6831429408
[2025-10-08 13:52:03] 2025-10-08 17:51:07,033 | INFO     | task id: 46376905
[2025-10-08 13:52:03] 2025-10-08 17:51:07,033 | INFO     | errors: (none)
[2025-10-08 13:52:03] 2025-10-08 17:51:07,033 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-08 13:52:03] 2025-10-08 17:51:07,033 | INFO     | pilot state: finished 
[2025-10-08 13:52:03] 2025-10-08 17:51:07,033 | INFO     | transexitcode: 0
[2025-10-08 13:52:03] 2025-10-08 17:51:07,033 | INFO     | exeerrorcode: 0
[2025-10-08 13:52:03] 2025-10-08 17:51:07,033 | INFO     | exeerrordiag: 
[2025-10-08 13:52:03] 2025-10-08 17:51:07,033 | INFO     | exitcode: 0
[2025-10-08 13:52:03] 2025-10-08 17:51:07,033 | INFO     | exitmsg: OK
[2025-10-08 13:52:03] 2025-10-08 17:51:07,033 | INFO     | cpuconsumptiontime: 32296 s
[2025-10-08 13:52:03] 2025-10-08 17:51:07,033 | INFO     | nevents: 400
[2025-10-08 13:52:03] 2025-10-08 17:51:07,033 | INFO     | neventsw: 0
[2025-10-08 13:52:03] 2025-10-08 17:51:07,033 | INFO     | pid: 834421
[2025-10-08 13:52:03] 2025-10-08 17:51:07,033 | INFO     | pgrp: 834421
[2025-10-08 13:52:03] 2025-10-08 17:51:07,033 | INFO     | corecount: 11
[2025-10-08 13:52:03] 2025-10-08 17:51:07,034 | INFO     | event service: False
[2025-10-08 13:52:03] 2025-10-08 17:51:07,034 | INFO     | sizes: {0: 2348814, 1: 2348814, 10: 2349104, 12: 2349132, 5986: 2375895, 5987: 2384893, 5991: 2385077, 5998: 2385271}
[2025-10-08 13:52:03] 2025-10-08 17:51:07,034 | INFO     | --------------------------------------------------
[2025-10-08 13:52:03] 2025-10-08 17:51:07,034 | INFO     | 
[2025-10-08 13:52:03] 2025-10-08 17:51:07,034 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-08 13:52:03] 2025-10-08 17:51:07,061 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-08 13:52:03] 2025-10-08 17:51:07,062 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-08 13:52:03] 2025-10-08 17:51:07,062 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-08 13:52:03] 2025-10-08 17:51:07,062 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-08 13:52:03] 2025-10-08 17:51:07,062 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-08 13:52:03] 2025-10-08 17:51:07,062 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-08 13:52:03] 2025-10-08 17:51:07,062 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-08 13:52:03] 2025-10-08 17:51:07,062 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-08 13:52:03] 2025-10-08 17:51:07,062 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-08 13:52:03] 2025-10-08 17:51:07,063 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-08 13:52:03] 2025-10-08 17:51:07,063 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-08 13:52:03] 2025-10-08 17:51:07,063 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-08 13:52:03] 2025-10-08 17:51:07,063 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-08 13:52:03] 2025-10-08 17:51:07,063 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-08 13:52:03] 2025-10-08 17:51:07,063 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-08 13:52:03] 2025-10-08 17:51:07,063 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-08 13:52:03] 2025-10-08 17:51:07,063 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-08 13:52:03] 2025-10-08 17:51:07,063 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-08 13:52:03] 2025-10-08 17:51:07,063 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-08 13:52:03] 2025-10-08 17:51:07,063 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-08 13:52:03] 2025-10-08 17:51:07,064 | INFO     | job 6831429408 has completed (purged errors)
[2025-10-08 13:52:03] 2025-10-08 17:51:07,064 | INFO     | overall cleanup function is called
[2025-10-08 13:52:03] 2025-10-08 17:51:08,072 | INFO     | --- collectZombieJob: --- 10, [834421]
[2025-10-08 13:52:03] 2025-10-08 17:51:08,073 | INFO     | zombie collector waiting for pid 834421
[2025-10-08 13:52:03] 2025-10-08 17:51:08,073 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-08 13:52:03] 2025-10-08 17:51:08,073 | INFO     | collected zombie processes
[2025-10-08 13:52:03] 2025-10-08 17:51:08,073 | INFO     | will attempt to kill all subprocesses of pid=834421
[2025-10-08 13:52:03] 2025-10-08 17:51:08,434 | INFO     | process IDs to be killed: [834421] (in reverse order)
[2025-10-08 13:52:03] 2025-10-08 17:51:08,569 | WARNING  | found no corresponding commands to process id(s)
[2025-10-08 13:52:03] 2025-10-08 17:51:08,570 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-08 13:52:03] 2025-10-08 17:51:08,585 | INFO     | did not find any defunct processes belonging to 834421
[2025-10-08 13:52:03] 2025-10-08 17:51:08,601 | INFO     | did not find any defunct processes belonging to 834421
[2025-10-08 13:52:03] 2025-10-08 17:51:08,601 | INFO     | ready for new job
[2025-10-08 13:52:03] 2025-10-08 17:51:08,602 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-08 13:52:03] 2025-10-08 17:51:08,603 | INFO     | ***************************************
[2025-10-08 13:52:03] 2025-10-08 17:51:08,603 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-08 13:52:03] 2025-10-08 17:51:08,603 | INFO     | ***************************************
[2025-10-08 13:52:03] 2025-10-08 17:51:08,604 | INFO     | 
[2025-10-08 13:52:03] 2025-10-08 17:51:08,609 | INFO     | architecture information:
[2025-10-08 13:52:03] 2025-10-08 17:51:08,609 | INFO     | executing command: cat /etc/os-release
[2025-10-08 13:52:03] 2025-10-08 17:51:08,643 | INFO     | cat /etc/os-release:
[2025-10-08 13:52:03] NAME="CentOS Linux"
[2025-10-08 13:52:03] VERSION="7 (Core)"
[2025-10-08 13:52:03] ID="centos"
[2025-10-08 13:52:03] ID_LIKE="rhel fedora"
[2025-10-08 13:52:03] VERSION_ID="7"
[2025-10-08 13:52:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-08 13:52:03] ANSI_COLOR="0;31"
[2025-10-08 13:52:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-08 13:52:03] HOME_URL="https://www.centos.org/"
[2025-10-08 13:52:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-08 13:52:03] 
[2025-10-08 13:52:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-08 13:52:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-08 13:52:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-08 13:52:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-08 13:52:03] 
[2025-10-08 13:52:03] 2025-10-08 17:51:08,644 | INFO     | ***************************************
[2025-10-08 13:52:03] 2025-10-08 17:51:09,147 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-08 13:52:03] 2025-10-08 17:51:09,170 | INFO     | sufficient remaining disk space (129874526208 B)
[2025-10-08 13:52:03] 2025-10-08 17:51:09,171 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-08 13:52:03] 2025-10-08 17:51:09,171 | INFO     | current server update state: UPDATING_FINAL
[2025-10-08 13:52:03] 2025-10-08 17:51:09,171 | INFO     | update_server=False
[2025-10-08 13:52:03] 2025-10-08 17:51:09,171 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-08 13:52:03] 2025-10-08 17:51:09,441 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-08 13:52:03] 2025-10-08 17:51:09,702 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-08 13:52:03] 2025-10-08 17:51:09,702 | INFO     | aborting loop
[2025-10-08 13:52:03] 2025-10-08 17:51:09,757 | INFO     | all data control threads have been joined
[2025-10-08 13:52:03] 2025-10-08 17:51:10,068 | INFO     | all job control threads have been joined
[2025-10-08 13:52:03] 2025-10-08 17:51:10,083 | INFO     | all payload control threads have been joined
[2025-10-08 13:52:03] 2025-10-08 17:51:10,177 | INFO     | [job] retrieve thread has finished
[2025-10-08 13:52:03] 2025-10-08 17:51:10,361 | INFO     | [data] copytool_in thread has finished
[2025-10-08 13:52:03] 2025-10-08 17:51:10,370 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-08 13:52:03] 2025-10-08 17:51:10,627 | INFO     | [job] validate thread has finished
[2025-10-08 13:52:03] 2025-10-08 17:51:10,708 | INFO     | [job] job monitor thread has finished
[2025-10-08 13:52:03] 2025-10-08 17:51:10,762 | INFO     | [data] control thread has finished
[2025-10-08 13:52:03] 2025-10-08 17:51:10,772 | INFO     | [payload] validate_post thread has finished
[2025-10-08 13:52:03] 2025-10-08 17:51:11,004 | INFO     | [job] create_data_payload thread has finished
[2025-10-08 13:52:03] 2025-10-08 17:51:11,075 | INFO     | [job] control thread has finished
[2025-10-08 13:52:03] 2025-10-08 17:51:11,088 | INFO     | [payload] control thread has finished
[2025-10-08 13:52:03] 2025-10-08 17:51:11,098 | INFO     | [payload] validate_pre thread has finished
[2025-10-08 13:52:03] 2025-10-08 17:51:11,173 | INFO     | [payload] execute_payloads thread has finished
[2025-10-08 13:52:03] 2025-10-08 17:51:11,262 | INFO     | [payload] failed_post thread has finished
[2025-10-08 13:52:03] 2025-10-08 17:51:11,447 | INFO     | [data] copytool_out thread has finished
[2025-10-08 13:52:03] 2025-10-08 17:51:11,567 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-08 13:52:03] 2025-10-08 17:51:12,043 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-08 13:52:03] 2025-10-08 17:51:13,048 | INFO     | [job] queue monitor thread has finished
[2025-10-08 13:52:03] 2025-10-08 17:51:14,377 | INFO     | [data] queue_monitor thread has finished
[2025-10-08 13:52:03] 2025-10-08 17:51:40,185 | INFO     | PID=827655 has CPU usage=4.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-08 13:52:03] 2025-10-08 17:51:40,185 | INFO     | .. there are 20 such processes running
[2025-10-08 13:52:03] 2025-10-08 17:51:40,185 | INFO     | found 0 job(s) in 20 queues
[2025-10-08 13:52:03] 2025-10-08 17:51:40,185 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-08 13:52:03] 2025-10-08 17:51:40,186 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-08 13:52:03] 2025-10-08 17:51:57,051 | INFO     | [monitor] cgroup control has ended
[2025-10-08 13:52:03] 2025-10-08 17:51:58,515 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139630639228736)>', '<ExcThread(monitor, started 139630284351232)>']
[2025-10-08 13:52:03] 2025-10-08 17:51:59,295 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-08 13:52:03] 2025-10-08 17:51:59,295 | INFO     | [monitor] control thread has ended
[2025-10-08 13:52:03] 2025-10-08 17:52:03,541 | INFO     | all workflow threads have been joined
[2025-10-08 13:52:03] 2025-10-08 17:52:03,541 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-08 13:52:03] 2025-10-08 17:52:03,542 | INFO     | traces error code: 0
[2025-10-08 13:52:03] 2025-10-08 17:52:03,542 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-08 13:52:03] 2025-10-08 17:52:03,723 [wrapper] ==== pilot stdout END ====
[2025-10-08 13:52:03] 2025-10-08 17:52:03,727 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-08 13:52:03] 2025-10-08 17:52:03,730 [wrapper] pilotpid: 827655
[2025-10-08 13:52:03] 2025-10-08 17:52:03,733 [wrapper] Pilot exit status: 0
[2025-10-08 13:52:03] 2025-10-08 17:52:03,746 [wrapper] pandaids: 6831429408
[2025-10-08 13:52:03] 2025-10-08 17:52:03,834 [wrapper] cleanup supervisor_pilot  953314 827656
[2025-10-08 13:52:03] 2025-10-08 17:52:03,840 [wrapper] Test setup, not cleaning
[2025-10-08 13:52:03] 2025-10-08 17:52:03,843 [wrapper] apfmon messages muted
[2025-10-08 13:52:03] 2025-10-08 17:52:03,846 [wrapper] ==== wrapper stdout END ====
[2025-10-08 13:52:03] 2025-10-08 17:52:03,850 [wrapper] ==== wrapper stderr END ====
[2025-10-08 13:52:03]  *** Error codes and diagnostics ***
[2025-10-08 13:52:03]     "exeErrorCode": 0,
[2025-10-08 13:52:03]     "exeErrorDiag": "",
[2025-10-08 13:52:03]     "pilotErrorCode": 0,
[2025-10-08 13:52:03]     "pilotErrorDiag": "",
[2025-10-08 13:52:03]  *** Listing of results directory ***
[2025-10-08 13:52:03] total 381316
[2025-10-08 13:52:03] -rw-r--r--. 1 boincer umatlas    552446 Oct  5 07:54 pilot3.tar.gz
[2025-10-08 13:52:03] -rw-r--r--. 1 boincer umatlas      5112 Oct  5 08:28 queuedata.json
[2025-10-08 13:52:03] -rwx------. 1 boincer umatlas     36292 Oct  5 08:29 runpilot2-wrapper.sh
[2025-10-08 13:52:03] -rw-r--r--. 1 boincer umatlas       100 Oct  8 12:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-08 13:52:03] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  8 12:10 run_atlas
[2025-10-08 13:52:03] -rw-r--r--. 1 boincer umatlas       105 Oct  8 12:10 job.xml
[2025-10-08 13:52:03] -rw-r--r--. 2 boincer umatlas 215286023 Oct  8 12:10 EVNT.46376901._003089.pool.root.1
[2025-10-08 13:52:03] -rw-r--r--. 2 boincer umatlas     15120 Oct  8 12:10 start_atlas.sh
[2025-10-08 13:52:03] drwxrwx--x. 2 boincer umatlas      4096 Oct  8 12:10 shared
[2025-10-08 13:52:03] -rw-r--r--. 2 boincer umatlas    565604 Oct  8 12:10 input.tar.gz
[2025-10-08 13:52:03] -rw-r--r--. 1 boincer umatlas         0 Oct  8 12:10 boinc_lockfile
[2025-10-08 13:52:03] -rw-r--r--. 1 boincer umatlas      2518 Oct  8 12:10 pandaJob.out
[2025-10-08 13:52:03] -rw-------. 1 boincer umatlas    979295 Oct  8 12:10 agis_schedconf.cvmfs.json
[2025-10-08 13:52:03] -rw-------. 1 boincer umatlas   1560401 Oct  8 12:10 agis_ddmendpoints.agis.ALL.json
[2025-10-08 13:52:03] drwx------. 4 boincer umatlas      4096 Oct  8 12:10 pilot3
[2025-10-08 13:52:03] -rw-r--r--. 1 boincer umatlas      6946 Oct  8 13:47 init_data.xml
[2025-10-08 13:52:03] -rw-------. 1 boincer umatlas 168806218 Oct  8 13:50 HITS.46376905._084167.pool.root.1
[2025-10-08 13:52:03] -rw-r--r--. 1 boincer umatlas       529 Oct  8 13:50 boinc_task_state.xml
[2025-10-08 13:52:03] -rw-------. 1 boincer umatlas        95 Oct  8 13:50 pilot_heartbeat.json
[2025-10-08 13:52:03] -rw-------. 1 boincer umatlas      1035 Oct  8 13:50 memory_monitor_summary.json
[2025-10-08 13:52:03] -rw-------. 1 boincer umatlas    380067 Oct  8 13:50 log.46376905._084167.job.log.tgz.1
[2025-10-08 13:52:03] -rw-------. 1 boincer umatlas      7778 Oct  8 13:51 heartbeat.json
[2025-10-08 13:52:03] -rw-r--r--. 1 boincer umatlas      8192 Oct  8 13:51 boinc_mmap_file
[2025-10-08 13:52:03] -rw-r--r--. 1 boincer umatlas        27 Oct  8 13:51 wrapper_checkpoint.txt
[2025-10-08 13:52:03] -rw-------. 1 boincer umatlas      4824 Oct  8 13:52 pilotlog.txt
[2025-10-08 13:52:03] -rw-------. 1 boincer umatlas    858698 Oct  8 13:52 log.46376905._084167.job.log.1
[2025-10-08 13:52:03] -rw-------. 1 boincer umatlas       357 Oct  8 13:52 output.list
[2025-10-08 13:52:03] -rw-r--r--. 1 boincer umatlas       620 Oct  8 13:52 runtime_log
[2025-10-08 13:52:03] -rw-------. 1 boincer umatlas   1259520 Oct  8 13:52 result.tar.gz
[2025-10-08 13:52:03] -rw-------. 1 boincer umatlas       653 Oct  8 13:52 ugoMDmT2cP8n9Rq4apOajLDm4fhM0noT9bVof3QYDmvDGMDm9bjgBn.diag
[2025-10-08 13:52:03] -rw-r--r--. 1 boincer umatlas      8705 Oct  8 13:52 runtime_log.err
[2025-10-08 13:52:03] -rw-r--r--. 1 boincer umatlas     22200 Oct  8 13:52 stderr.txt
[2025-10-08 13:52:03] HITS file was successfully produced:
[2025-10-08 13:52:03] -rw-------. 1 boincer umatlas 168806218 Oct  8 13:50 shared/HITS.pool.root.1
[2025-10-08 13:52:03]  *** Contents of shared directory: ***
[2025-10-08 13:52:03] total 376908
[2025-10-08 13:52:03] -rw-r--r--. 2 boincer umatlas 215286023 Oct  8 12:10 ATLAS.root_0
[2025-10-08 13:52:03] -rw-r--r--. 2 boincer umatlas     15120 Oct  8 12:10 start_atlas.sh
[2025-10-08 13:52:03] -rw-r--r--. 2 boincer umatlas    565604 Oct  8 12:10 input.tar.gz
[2025-10-08 13:52:03] -rw-------. 1 boincer umatlas 168806218 Oct  8 13:50 HITS.pool.root.1
[2025-10-08 13:52:03] -rw-------. 1 boincer umatlas   1259520 Oct  8 13:52 result.tar.gz
13:52:25 (823956): run_atlas exited; CPU time 32392.724890
13:52:25 (823956): called boinc_finish(0)

</stderr_txt>
]]>

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