Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:44:31 (23652): wrapper (7.7.26015): starting
11:44:31 (23652): wrapper: running run_atlas (--nthreads 8)
[2025-10-08 11:44:31] Arguments: --nthreads 8
[2025-10-08 11:44:31] Threads: 8
[2025-10-08 11:44:31] Checking for CVMFS
[2025-10-08 11:44:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 11:44:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 11:44:31] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 11:44:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 11:44:32] 2.11.2.0 18601 31502 101984 151477 0 1 10172996 18432001 1 130560 0 25603479 99.994 1000315 38050 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-08 11:44:32] CVMFS is ok
[2025-10-08 11:44:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-08 11:44:32] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-08 11:44:32] Further information can be found at the LHC@home message board.
[2025-10-08 11:44:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 11:44:32] Checking for apptainer binary...
[2025-10-08 11:44:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 11:44:32] Running /usr/bin/apptainer --version
[2025-10-08 11:44:32] apptainer version 1.3.2-1.el7
[2025-10-08 11:44:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 11:44:33] c-206-13.aglt2.org
[2025-10-08 11:44:33] apptainer works
[2025-10-08 11:44:33] Set ATHENA_PROC_NUMBER=8
[2025-10-08 11:44:33] Set ATHENA_CORE_NUMBER=8
[2025-10-08 11:44:33] Starting ATLAS job with PandaID=6826052418
[2025-10-08 11:44:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-08 14:44:09]  *** The last 200 lines of the pilot log: ***
[2025-10-08 14:44:09] 2025-10-08 18:43:25,382 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-08 14:44:09] 2025-10-08 18:43:25,382 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-08 14:44:09] 2025-10-08 18:43:25,388 | INFO     | fitting pss+swap vs Time
[2025-10-08 14:44:09] 2025-10-08 18:43:25,388 | INFO     | sum of square deviations: 1690450300.0
[2025-10-08 14:44:09] 2025-10-08 18:43:25,390 | INFO     | sum of deviations: -8715350752.5
[2025-10-08 14:44:09] 2025-10-08 18:43:25,390 | INFO     | mean x: 1759943654.5
[2025-10-08 14:44:09] 2025-10-08 18:43:25,390 | INFO     | mean y: 2492591.1875
[2025-10-08 14:44:09] 2025-10-08 18:43:25,390 | INFO     | -- intersect: 9076125961.895988
[2025-10-08 14:44:09] 2025-10-08 18:43:25,391 | INFO     | intersect: 9076125961.895988
[2025-10-08 14:44:09] 2025-10-08 18:43:25,391 | INFO     | chi2: 2.3666348327695665
[2025-10-08 14:44:09] 2025-10-08 18:43:25,392 | INFO     | sum of square deviations: 1550429070.0
[2025-10-08 14:44:09] 2025-10-08 18:43:25,393 | INFO     | sum of deviations: 3143852465.0000033
[2025-10-08 14:44:09] 2025-10-08 18:43:25,393 | INFO     | mean x: 1759943502.0
[2025-10-08 14:44:09] 2025-10-08 18:43:25,393 | INFO     | mean y: 2505216.7426900584
[2025-10-08 14:44:09] 2025-10-08 18:43:25,393 | INFO     | -- intersect: -3566186072.710131
[2025-10-08 14:44:09] 2025-10-08 18:43:25,394 | INFO     | intersect: -3566186072.710131
[2025-10-08 14:44:09] 2025-10-08 18:43:25,394 | INFO     | chi2: 1.6019942764510529
[2025-10-08 14:44:09] 2025-10-08 18:43:25,394 | INFO     | current chi2=1.6019942764510529 (change=32.30919048984372 %)
[2025-10-08 14:44:09] 2025-10-08 18:43:25,395 | INFO     | sum of square deviations: 1418361477.5
[2025-10-08 14:44:09] 2025-10-08 18:43:25,396 | INFO     | sum of deviations: 3197030495.9999995
[2025-10-08 14:44:09] 2025-10-08 18:43:25,396 | INFO     | mean x: 1759943349.5
[2025-10-08 14:44:09] 2025-10-08 18:43:25,396 | INFO     | mean y: 2505278.1686746986
[2025-10-08 14:44:09] 2025-10-08 18:43:25,397 | INFO     | -- intersect: -3964461287.7178316
[2025-10-08 14:44:09] 2025-10-08 18:43:25,397 | INFO     | intersect: -3964461287.7178316
[2025-10-08 14:44:09] 2025-10-08 18:43:25,397 | INFO     | chi2: 1.6027864584487095
[2025-10-08 14:44:09] 2025-10-08 18:43:25,397 | INFO     | current chi2=1.6027864584487095 (change=-0.04944973957157775 %)
[2025-10-08 14:44:09] 2025-10-08 18:43:25,398 | INFO     | right removable region: 165
[2025-10-08 14:44:09] 2025-10-08 18:43:25,398 | INFO     | sum of square deviations: 1550429070.0
[2025-10-08 14:44:09] 2025-10-08 18:43:25,399 | INFO     | sum of deviations: -34379657035.0
[2025-10-08 14:44:09] 2025-10-08 18:43:25,399 | INFO     | mean x: 1759943807.0
[2025-10-08 14:44:09] 2025-10-08 18:43:25,400 | INFO     | mean y: 2520156.514619883
[2025-10-08 14:44:09] 2025-10-08 18:43:25,400 | INFO     | -- intersect: 39028016811.79356
[2025-10-08 14:44:09] 2025-10-08 18:43:25,400 | INFO     | intersect: 39028016811.79356
[2025-10-08 14:44:09] 2025-10-08 18:43:25,400 | INFO     | chi2: 0.9378280012576058
[2025-10-08 14:44:09] 2025-10-08 18:43:25,401 | INFO     | current chi2=0.9378280012576058 (change=60.37293171417968 %)
[2025-10-08 14:44:09] 2025-10-08 18:43:25,401 | INFO     | sum of square deviations: 1418361477.5
[2025-10-08 14:44:09] 2025-10-08 18:43:25,402 | INFO     | sum of deviations: -32393735880.5
[2025-10-08 14:44:09] 2025-10-08 18:43:25,403 | INFO     | mean x: 1759943959.5
[2025-10-08 14:44:09] 2025-10-08 18:43:25,403 | INFO     | mean y: 2517796.801204819
[2025-10-08 14:44:09] 2025-10-08 18:43:25,403 | INFO     | -- intersect: 40197602542.76604
[2025-10-08 14:44:09] 2025-10-08 18:43:25,403 | INFO     | intersect: 40197602542.76604
[2025-10-08 14:44:09] 2025-10-08 18:43:25,404 | INFO     | chi2: 0.9224179672379083
[2025-10-08 14:44:09] 2025-10-08 18:43:25,404 | INFO     | current chi2=0.9224179672379083 (change=1.6431620722598426 %)
[2025-10-08 14:44:09] 2025-10-08 18:43:25,404 | INFO     | left removable region: 20
[2025-10-08 14:44:09] 2025-10-08 18:43:25,404 | INFO     | sum of square deviations: 945282840.0
[2025-10-08 14:44:09] 2025-10-08 18:43:25,405 | INFO     | sum of deviations: -8743189475.0
[2025-10-08 14:44:09] 2025-10-08 18:43:25,406 | INFO     | mean x: 1759943929.0
[2025-10-08 14:44:09] 2025-10-08 18:43:25,406 | INFO     | mean y: 2517076.793103448
[2025-10-08 14:44:09] 2025-10-08 18:43:25,406 | INFO     | -- intersect: 16280738351.414938
[2025-10-08 14:44:09] 2025-10-08 18:43:25,406 | INFO     | intersect: 16280738351.414938
[2025-10-08 14:44:09] 2025-10-08 18:43:25,406 | INFO     | chi2: 0.08065675759882078
[2025-10-08 14:44:09] 2025-10-08 18:43:25,407 | INFO     | -- intersect: 16280738351.414938
[2025-10-08 14:44:09] 2025-10-08 18:43:25,407 | INFO     | current memory leak: -9.25 B/s (using 145 data points, chi2=0.08)
[2025-10-08 14:44:09] 2025-10-08 18:43:25,408 | INFO     | could have reported an average CPU frequency of 2195 MHz (9 samples)
[2025-10-08 14:44:09] 2025-10-08 18:43:25,408 | INFO     | ..............................
[2025-10-08 14:44:09] 2025-10-08 18:43:25,408 | INFO     | . Timing measurements:
[2025-10-08 14:44:09] 2025-10-08 18:43:25,408 | INFO     | . get job = 0 s
[2025-10-08 14:44:09] 2025-10-08 18:43:25,408 | INFO     | . initial setup = 2 s
[2025-10-08 14:44:09] 2025-10-08 18:43:25,408 | INFO     | . payload setup = 7 s
[2025-10-08 14:44:09] 2025-10-08 18:43:25,409 | INFO     | . stage-in = 0 s
[2025-10-08 14:44:09] 2025-10-08 18:43:25,409 | INFO     | . payload execution = 10682 s
[2025-10-08 14:44:09] 2025-10-08 18:43:25,409 | INFO     | . stage-out = 1 s
[2025-10-08 14:44:09] 2025-10-08 18:43:25,409 | INFO     | . log creation = 0 s
[2025-10-08 14:44:09] 2025-10-08 18:43:25,409 | INFO     | ..............................
[2025-10-08 14:44:09] 2025-10-08 18:43:25,568 | INFO     | 
[2025-10-08 14:44:09] 2025-10-08 18:43:25,568 | INFO     | job summary report
[2025-10-08 14:44:09] 2025-10-08 18:43:25,568 | INFO     | --------------------------------------------------
[2025-10-08 14:44:09] 2025-10-08 18:43:25,568 | INFO     | PanDA job id: 6826052418
[2025-10-08 14:44:09] 2025-10-08 18:43:25,569 | INFO     | task id: 46373048
[2025-10-08 14:44:09] 2025-10-08 18:43:25,569 | INFO     | errors: (none)
[2025-10-08 14:44:09] 2025-10-08 18:43:25,569 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-08 14:44:09] 2025-10-08 18:43:25,569 | INFO     | pilot state: finished 
[2025-10-08 14:44:09] 2025-10-08 18:43:25,569 | INFO     | transexitcode: 0
[2025-10-08 14:44:09] 2025-10-08 18:43:25,569 | INFO     | exeerrorcode: 0
[2025-10-08 14:44:09] 2025-10-08 18:43:25,570 | INFO     | exeerrordiag: 
[2025-10-08 14:44:09] 2025-10-08 18:43:25,570 | INFO     | exitcode: 0
[2025-10-08 14:44:09] 2025-10-08 18:43:25,570 | INFO     | exitmsg: OK
[2025-10-08 14:44:09] 2025-10-08 18:43:25,570 | INFO     | cpuconsumptiontime: 79135 s
[2025-10-08 14:44:09] 2025-10-08 18:43:25,570 | INFO     | nevents: 400
[2025-10-08 14:44:09] 2025-10-08 18:43:25,571 | INFO     | neventsw: 0
[2025-10-08 14:44:09] 2025-10-08 18:43:25,571 | INFO     | pid: 1422
[2025-10-08 14:44:09] 2025-10-08 18:43:25,571 | INFO     | pgrp: 1422
[2025-10-08 14:44:09] 2025-10-08 18:43:25,571 | INFO     | corecount: 8
[2025-10-08 14:44:09] 2025-10-08 18:43:25,571 | INFO     | event service: False
[2025-10-08 14:44:09] 2025-10-08 18:43:25,572 | INFO     | sizes: {0: 2348013, 1: 2348869, 6: 2349131, 12: 2349159, 10693: 2378138, 10695: 2387136, 10697: 2387320, 10702: 2387578}
[2025-10-08 14:44:09] 2025-10-08 18:43:25,572 | INFO     | --------------------------------------------------
[2025-10-08 14:44:09] 2025-10-08 18:43:25,572 | INFO     | 
[2025-10-08 14:44:09] 2025-10-08 18:43:25,572 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-08 14:44:09] 2025-10-08 18:43:25,591 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-08 14:44:09] 2025-10-08 18:43:25,592 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-08 14:44:09] 2025-10-08 18:43:25,592 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-08 14:44:09] 2025-10-08 18:43:25,592 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-08 14:44:09] 2025-10-08 18:43:25,592 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-08 14:44:09] 2025-10-08 18:43:25,593 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-08 14:44:09] 2025-10-08 18:43:25,593 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-08 14:44:09] 2025-10-08 18:43:25,593 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-08 14:44:09] 2025-10-08 18:43:25,593 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-08 14:44:09] 2025-10-08 18:43:25,593 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-08 14:44:09] 2025-10-08 18:43:25,593 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-08 14:44:09] 2025-10-08 18:43:25,594 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-08 14:44:09] 2025-10-08 18:43:25,594 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-08 14:44:09] 2025-10-08 18:43:25,594 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-08 14:44:09] 2025-10-08 18:43:25,594 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-08 14:44:09] 2025-10-08 18:43:25,594 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-08 14:44:09] 2025-10-08 18:43:25,595 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-08 14:44:09] 2025-10-08 18:43:25,595 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-08 14:44:09] 2025-10-08 18:43:25,595 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-08 14:44:09] 2025-10-08 18:43:25,595 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-08 14:44:09] 2025-10-08 18:43:25,595 | INFO     | job 6826052418 has completed (purged errors)
[2025-10-08 14:44:09] 2025-10-08 18:43:25,596 | INFO     | overall cleanup function is called
[2025-10-08 14:44:09] 2025-10-08 18:43:26,603 | INFO     | --- collectZombieJob: --- 10, [1422]
[2025-10-08 14:44:09] 2025-10-08 18:43:26,604 | INFO     | zombie collector waiting for pid 1422
[2025-10-08 14:44:09] 2025-10-08 18:43:26,604 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-08 14:44:09] 2025-10-08 18:43:26,604 | INFO     | collected zombie processes
[2025-10-08 14:44:09] 2025-10-08 18:43:26,604 | INFO     | will attempt to kill all subprocesses of pid=1422
[2025-10-08 14:44:09] 2025-10-08 18:43:26,713 | INFO     | process IDs to be killed: [1422] (in reverse order)
[2025-10-08 14:44:09] 2025-10-08 18:43:26,769 | WARNING  | found no corresponding commands to process id(s)
[2025-10-08 14:44:09] 2025-10-08 18:43:26,770 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-08 14:44:09] 2025-10-08 18:43:26,775 | INFO     | did not find any defunct processes belonging to 1422
[2025-10-08 14:44:09] 2025-10-08 18:43:26,779 | INFO     | did not find any defunct processes belonging to 1422
[2025-10-08 14:44:09] 2025-10-08 18:43:26,780 | INFO     | ready for new job
[2025-10-08 14:44:09] 2025-10-08 18:43:26,780 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-08 14:44:09] 2025-10-08 18:43:26,782 | INFO     | ***************************************
[2025-10-08 14:44:09] 2025-10-08 18:43:26,782 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-08 14:44:09] 2025-10-08 18:43:26,782 | INFO     | ***************************************
[2025-10-08 14:44:09] 2025-10-08 18:43:26,782 | INFO     | 
[2025-10-08 14:44:09] 2025-10-08 18:43:26,784 | INFO     | architecture information:
[2025-10-08 14:44:09] 2025-10-08 18:43:26,784 | INFO     | executing command: cat /etc/os-release
[2025-10-08 14:44:09] 2025-10-08 18:43:26,799 | INFO     | cat /etc/os-release:
[2025-10-08 14:44:09] NAME="CentOS Linux"
[2025-10-08 14:44:09] VERSION="7 (Core)"
[2025-10-08 14:44:09] ID="centos"
[2025-10-08 14:44:09] ID_LIKE="rhel fedora"
[2025-10-08 14:44:09] VERSION_ID="7"
[2025-10-08 14:44:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-08 14:44:09] ANSI_COLOR="0;31"
[2025-10-08 14:44:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-08 14:44:09] HOME_URL="https://www.centos.org/"
[2025-10-08 14:44:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-08 14:44:09] 
[2025-10-08 14:44:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-08 14:44:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-08 14:44:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-08 14:44:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-08 14:44:09] 
[2025-10-08 14:44:09] 2025-10-08 18:43:26,800 | INFO     | ***************************************
[2025-10-08 14:44:09] 2025-10-08 18:43:27,303 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-08 14:44:09] 2025-10-08 18:43:27,325 | INFO     | sufficient remaining disk space (28272754688 B)
[2025-10-08 14:44:09] 2025-10-08 18:43:27,326 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-08 14:44:09] 2025-10-08 18:43:27,326 | INFO     | current server update state: UPDATING_FINAL
[2025-10-08 14:44:09] 2025-10-08 18:43:27,326 | INFO     | update_server=False
[2025-10-08 14:44:09] 2025-10-08 18:43:27,326 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-08 14:44:09] 2025-10-08 18:43:27,327 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-08 14:44:09] 2025-10-08 18:43:27,327 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-08 14:44:09] 2025-10-08 18:43:27,330 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-08 14:44:09] 2025-10-08 18:43:27,478 | INFO     | all data control threads have been joined
[2025-10-08 14:44:09] 2025-10-08 18:43:27,780 | INFO     | all payload control threads have been joined
[2025-10-08 14:44:09] 2025-10-08 18:43:27,837 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-08 14:44:09] 2025-10-08 18:43:27,838 | INFO     | aborting loop
[2025-10-08 14:44:09] 2025-10-08 18:43:28,335 | INFO     | [job] retrieve thread has finished
[2025-10-08 14:44:09] 2025-10-08 18:43:28,335 | INFO     | [job] queue monitor thread has finished
[2025-10-08 14:44:09] 2025-10-08 18:43:28,340 | INFO     | [payload] failed_post thread has finished
[2025-10-08 14:44:09] 2025-10-08 18:43:28,433 | INFO     | [payload] execute_payloads thread has finished
[2025-10-08 14:44:09] 2025-10-08 18:43:28,484 | INFO     | [data] control thread has finished
[2025-10-08 14:44:09] 2025-10-08 18:43:28,577 | INFO     | [data] copytool_in thread has finished
[2025-10-08 14:44:09] 2025-10-08 18:43:28,589 | INFO     | all job control threads have been joined
[2025-10-08 14:44:09] 2025-10-08 18:43:28,783 | INFO     | [payload] control thread has finished
[2025-10-08 14:44:09] 2025-10-08 18:43:28,843 | INFO     | [job] job monitor thread has finished
[2025-10-08 14:44:09] 2025-10-08 18:43:28,916 | INFO     | [job] validate thread has finished
[2025-10-08 14:44:09] 2025-10-08 18:43:29,233 | INFO     | [payload] validate_post thread has finished
[2025-10-08 14:44:09] 2025-10-08 18:43:29,335 | INFO     | [data] copytool_out thread has finished
[2025-10-08 14:44:09] 2025-10-08 18:43:29,555 | INFO     | [payload] validate_pre thread has finished
[2025-10-08 14:44:09] 2025-10-08 18:43:29,595 | INFO     | [job] control thread has finished
[2025-10-08 14:44:09] 2025-10-08 18:43:29,632 | INFO     | [job] create_data_payload thread has finished
[2025-10-08 14:44:09] 2025-10-08 18:43:31,336 | INFO     | [data] queue_monitor thread has finished
[2025-10-08 14:44:09] 2025-10-08 18:43:38,380 | INFO     | job.realtimelogging is not enabled
[2025-10-08 14:44:09] 2025-10-08 18:43:39,386 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-08 14:44:09] 2025-10-08 18:43:58,214 | INFO     | PID=27339 has CPU usage=4.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-08 14:44:09] 2025-10-08 18:43:58,214 | INFO     | .. there are 3 such processes running
[2025-10-08 14:44:09] 2025-10-08 18:43:58,215 | INFO     | found 0 job(s) in 20 queues
[2025-10-08 14:44:09] 2025-10-08 18:43:58,215 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-08 14:44:09] 2025-10-08 18:43:58,215 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-08 14:44:09] 2025-10-08 18:44:03,595 | INFO     | [monitor] cgroup control has ended
[2025-10-08 14:44:09] 2025-10-08 18:44:04,356 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140242250442560)>', '<ExcThread(monitor, started 140241126016768)>']
[2025-10-08 14:44:09] 2025-10-08 18:44:05,252 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-08 14:44:09] 2025-10-08 18:44:05,252 | INFO     | [monitor] control thread has ended
[2025-10-08 14:44:09] 2025-10-08 18:44:09,380 | INFO     | all workflow threads have been joined
[2025-10-08 14:44:09] 2025-10-08 18:44:09,381 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-08 14:44:09] 2025-10-08 18:44:09,381 | INFO     | traces error code: 0
[2025-10-08 14:44:09] 2025-10-08 18:44:09,381 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-08 14:44:09] 2025-10-08 18:44:09,514 [wrapper] ==== pilot stdout END ====
[2025-10-08 14:44:09] 2025-10-08 18:44:09,516 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-08 14:44:09] 2025-10-08 18:44:09,518 [wrapper] pilotpid: 27339
[2025-10-08 14:44:09] 2025-10-08 18:44:09,520 [wrapper] Pilot exit status: 0
[2025-10-08 14:44:09] 2025-10-08 18:44:09,527 [wrapper] pandaids: 6826052418
[2025-10-08 14:44:09] 2025-10-08 18:44:09,565 [wrapper] cleanup supervisor_pilot  9862 27340
[2025-10-08 14:44:09] 2025-10-08 18:44:09,567 [wrapper] Test setup, not cleaning
[2025-10-08 14:44:09] 2025-10-08 18:44:09,569 [wrapper] apfmon messages muted
[2025-10-08 14:44:09] 2025-10-08 18:44:09,570 [wrapper] ==== wrapper stdout END ====
[2025-10-08 14:44:09] 2025-10-08 18:44:09,572 [wrapper] ==== wrapper stderr END ====
[2025-10-08 14:44:09]  *** Error codes and diagnostics ***
[2025-10-08 14:44:09]     "exeErrorCode": 0,
[2025-10-08 14:44:09]     "exeErrorDiag": "",
[2025-10-08 14:44:09]     "pilotErrorCode": 0,
[2025-10-08 14:44:09]     "pilotErrorDiag": "",
[2025-10-08 14:44:09]  *** Listing of results directory ***
[2025-10-08 14:44:09] total 410400
[2025-10-08 14:44:09] -rw-r--r-- 1 boincer umatlas    552446 Sep 30 10:17 pilot3.tar.gz
[2025-10-08 14:44:09] -rwx------ 1 boincer umatlas     36292 Sep 30 10:40 runpilot2-wrapper.sh
[2025-10-08 14:44:09] -rw-r--r-- 1 boincer umatlas      5112 Sep 30 10:40 queuedata.json
[2025-10-08 14:44:09] -rw-r--r-- 1 boincer umatlas       100 Oct  8 11:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-08 14:44:09] -rwxr-xr-x 1 boincer umatlas      7986 Oct  8 11:44 run_atlas
[2025-10-08 14:44:09] -rw-r--r-- 1 boincer umatlas       105 Oct  8 11:44 job.xml
[2025-10-08 14:44:09] -rw-r--r-- 2 boincer umatlas 219204332 Oct  8 11:44 EVNT.46373045._001999.pool.root.1
[2025-10-08 14:44:09] -rw-r--r-- 2 boincer umatlas     15120 Oct  8 11:44 start_atlas.sh
[2025-10-08 14:44:09] drwxrwx--x 2 boincer umatlas      4096 Oct  8 11:44 shared
[2025-10-08 14:44:09] -rw-r--r-- 2 boincer umatlas    565603 Oct  8 11:44 input.tar.gz
[2025-10-08 14:44:09] -rw-r--r-- 1 boincer umatlas         0 Oct  8 11:44 boinc_lockfile
[2025-10-08 14:44:09] -rw-r--r-- 1 boincer umatlas      2538 Oct  8 11:44 pandaJob.out
[2025-10-08 14:44:09] -rw------- 1 boincer umatlas    979295 Oct  8 11:44 agis_schedconf.cvmfs.json
[2025-10-08 14:44:09] -rw------- 1 boincer umatlas   1560401 Oct  8 11:44 agis_ddmendpoints.agis.ALL.json
[2025-10-08 14:44:09] drwx------ 4 boincer umatlas      4096 Oct  8 11:44 pilot3
[2025-10-08 14:44:09] -rw-r--r-- 1 boincer umatlas      5951 Oct  8 14:37 init_data.xml
[2025-10-08 14:44:09] -rw------- 1 boincer umatlas 193357330 Oct  8 14:42 HITS.46373048._062725.pool.root.1
[2025-10-08 14:44:09] -rw-r--r-- 1 boincer umatlas       530 Oct  8 14:42 boinc_task_state.xml
[2025-10-08 14:44:09] -rw------- 1 boincer umatlas      1054 Oct  8 14:43 memory_monitor_summary.json
[2025-10-08 14:44:09] -rw------- 1 boincer umatlas    403901 Oct  8 14:43 log.46373048._062725.job.log.tgz.1
[2025-10-08 14:44:09] -rw------- 1 boincer umatlas      7868 Oct  8 14:43 heartbeat.json
[2025-10-08 14:44:09] -rw-r--r-- 1 boincer umatlas      8192 Oct  8 14:43 boinc_mmap_file
[2025-10-08 14:44:09] -rw-r--r-- 1 boincer umatlas        28 Oct  8 14:43 wrapper_checkpoint.txt
[2025-10-08 14:44:09] -rw------- 1 boincer umatlas        95 Oct  8 14:43 pilot_heartbeat.json
[2025-10-08 14:44:09] -rw------- 1 boincer umatlas      4893 Oct  8 14:44 pilotlog.txt
[2025-10-08 14:44:09] -rw------- 1 boincer umatlas   1495160 Oct  8 14:44 log.46373048._062725.job.log.1
[2025-10-08 14:44:09] -rw------- 1 boincer umatlas       357 Oct  8 14:44 output.list
[2025-10-08 14:44:09] -rw-r--r-- 1 boincer umatlas       620 Oct  8 14:44 runtime_log
[2025-10-08 14:44:09] -rw------- 1 boincer umatlas   1914880 Oct  8 14:44 result.tar.gz
[2025-10-08 14:44:09] -rw-r--r-- 1 boincer umatlas      8704 Oct  8 14:44 runtime_log.err
[2025-10-08 14:44:09] -rw------- 1 boincer umatlas       662 Oct  8 14:44 l9JMDmGiqN8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmKS8MDmeXLshm.diag
[2025-10-08 14:44:09] -rw-r--r-- 1 boincer umatlas     20844 Oct  8 14:44 stderr.txt
[2025-10-08 14:44:09] HITS file was successfully produced:
[2025-10-08 14:44:09] -rw------- 1 boincer umatlas 193357330 Oct  8 14:42 shared/HITS.pool.root.1
[2025-10-08 14:44:09]  *** Contents of shared directory: ***
[2025-10-08 14:44:09] total 405344
[2025-10-08 14:44:09] -rw-r--r-- 2 boincer umatlas 219204332 Oct  8 11:44 ATLAS.root_0
[2025-10-08 14:44:09] -rw-r--r-- 2 boincer umatlas     15120 Oct  8 11:44 start_atlas.sh
[2025-10-08 14:44:09] -rw-r--r-- 2 boincer umatlas    565603 Oct  8 11:44 input.tar.gz
[2025-10-08 14:44:09] -rw------- 1 boincer umatlas 193357330 Oct  8 14:42 HITS.pool.root.1
[2025-10-08 14:44:09] -rw------- 1 boincer umatlas   1914880 Oct  8 14:44 result.tar.gz
14:44:10 (23652): run_atlas exited; CPU time 79075.616365
14:44:10 (23652): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN