Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
05:42:42 (1207163): wrapper (7.7.26015): starting
05:42:42 (1207163): wrapper: running run_atlas (--nthreads 4)
[2025-10-09 05:42:42] Arguments: --nthreads 4
[2025-10-09 05:42:42] Threads: 4
[2025-10-09 05:42:42] Checking for CVMFS
[2025-10-09 05:42:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-09 05:42:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-09 05:42:42] Running cvmfs_config stat atlas.cern.ch
[2025-10-09 05:42:44] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-09 05:42:44] 2.13.2.0 326601 1318 51576 151495 3 187 3128878 4194304 918 130560 65 2410898 97.086 7370281 366 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-09 05:42:44] CVMFS is ok
[2025-10-09 05:42:44] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-09 05:42:44] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-09 05:42:44] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-09 05:42:44] Further information can be found at the LHC@home message board.
[2025-10-09 05:42:44] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-09 05:42:44] Checking for apptainer binary...
[2025-10-09 05:42:44] apptainer is not installed, using version from CVMFS
[2025-10-09 05:42:44] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-09 05:42:45] Ryze
[2025-10-09 05:42:45] apptainer works
[2025-10-09 05:42:45] Set ATHENA_PROC_NUMBER=4
[2025-10-09 05:42:45] Set ATHENA_CORE_NUMBER=4
[2025-10-09 05:42:45] Starting ATLAS job with PandaID=6833982564
[2025-10-09 05:42:45] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 07:19:34]  *** The last 200 lines of the pilot log: ***
[2025-10-09 07:19:34]  status_code=0
[2025-10-09 07:19:34]  storage_token=
[2025-10-09 07:19:34]  surl=/var/lib/boinc-client/slots/3/PanDA_Pilot-6833982564/log.46376905._133705.job.log.tgz.1
[2025-10-09 07:19:34]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e9/43/log.46376905._133705.job.log.tgz.1
[2025-10-09 07:19:34]  workdir=None
[2025-10-09 07:19:34] ]
[2025-10-09 07:19:34] 2025-10-09 05:18:53,862 | INFO     | transferring file log.46376905._133705.job.log.tgz.1 from /var/lib/boinc-client/slots/3/PanDA_Pilot-6833982564/log.46376905._133705.job.log.tgz.1 to /var/lib/boinc
[2025-10-09 07:19:34] 2025-10-09 05:18:53,862 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/3/PanDA_Pilot-6833982564/log.46376905._133705.job.log.tgz.1 /var/lib/boinc-client/slots/3/log.463769
[2025-10-09 07:19:34] 2025-10-09 05:18:53,883 | INFO     | adding to output.list: log.46376905._133705.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e9/43/log.46376905._133705.job.log.tg
[2025-10-09 07:19:34] 2025-10-09 05:18:53,884 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-09 07:19:34] 2025-10-09 05:18:53,884 | INFO     | summary of transferred files:
[2025-10-09 07:19:34] 2025-10-09 05:18:53,884 | INFO     |  -- lfn=log.46376905._133705.job.log.tgz.1, status_code=0, status=transferred
[2025-10-09 07:19:34] 2025-10-09 05:18:53,884 | INFO     | stage-out finished correctly
[2025-10-09 07:19:34] 2025-10-09 05:18:54,249 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-09 07:19:34] 2025-10-09 05:18:54,510 | WARNING  | process 1217534 can no longer be monitored (due to stat problems) - aborting
[2025-10-09 07:19:34] 2025-10-09 05:18:54,510 | INFO     | using path: /var/lib/boinc-client/slots/3/PanDA_Pilot-6833982564/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 07:19:34] 2025-10-09 05:18:54,586 | INFO     | number of running child processes to parent process 1217534: 1
[2025-10-09 07:19:34] 2025-10-09 05:18:54,586 | INFO     | maximum number of monitored processes: 6
[2025-10-09 07:19:34] 2025-10-09 05:18:54,668 | INFO     | time since job start (5753s) is within the limit (172800.0s)
[2025-10-09 07:19:34] 2025-10-09 05:18:55,935 | INFO     | job 6833982564 has state=finished
[2025-10-09 07:19:34] 2025-10-09 05:18:55,935 | INFO     | preparing for final server update for job 6833982564 in state='finished'
[2025-10-09 07:19:34] 2025-10-09 05:18:55,935 | INFO     | this job has now completed (state=finished)
[2025-10-09 07:19:34] 2025-10-09 05:18:55,935 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-09 07:19:34] 2025-10-09 05:18:55,935 | INFO     | log transfer has been attempted: DONE
[2025-10-09 07:19:34] 2025-10-09 05:18:55,935 | INFO     | job 6833982564 has finished - writing final server update
[2025-10-09 07:19:34] 2025-10-09 05:18:55,935 | INFO     | total number of processed events: 400 (read)
[2025-10-09 07:19:34] 2025-10-09 05:18:55,937 | INFO     | executing command: lscpu
[2025-10-09 07:19:34] 2025-10-09 05:18:55,959 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-09 07:19:34] 2025-10-09 05:18:56,673 | INFO     | time since job start (5755s) is within the limit (172800.0s)
[2025-10-09 07:19:34] 2025-10-09 05:18:57,089 | INFO     | monitor loop #435: job 0:6833982564 is in state 'finished'
[2025-10-09 07:19:34] 2025-10-09 05:18:57,089 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 07:19:34] 2025-10-09 05:18:58,678 | INFO     | time since job start (5757s) is within the limit (172800.0s)
[2025-10-09 07:19:34] 2025-10-09 05:18:59,592 | INFO     | monitor loop #436: job 0:6833982564 is in state 'finished'
[2025-10-09 07:19:34] 2025-10-09 05:18:59,592 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-09 07:19:34] 2025-10-09 05:19:00,683 | INFO     | time since job start (5759s) is within the limit (172800.0s)
[2025-10-09 07:19:34] 2025-10-09 05:19:01,113 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-09 07:19:34] 2025-10-09 05:19:01,115 | INFO     | found 12 cores (12 cores per socket, 1 socket) HT, CPU MHz: 3701.6136249999995
[2025-10-09 07:19:34] 2025-10-09 05:19:01,118 | INFO     | using path: /var/lib/boinc-client/slots/3/PanDA_Pilot-6833982564/memory_monitor_summary.json (trf name=prmon)
[2025-10-09 07:19:34] 2025-10-09 05:19:01,118 | INFO     | extracted standard info from prmon json
[2025-10-09 07:19:34] 2025-10-09 05:19:01,118 | INFO     | extracted standard memory fields from prmon json
[2025-10-09 07:19:34] 2025-10-09 05:19:01,118 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-09 07:19:34] 2025-10-09 05:19:01,118 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-09 07:19:34] 2025-10-09 05:19:01,118 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-09 07:19:34] 2025-10-09 05:19:01,119 | INFO     | fitting pss+swap vs Time
[2025-10-09 07:19:34] 2025-10-09 05:19:01,120 | INFO     | sum of square deviations: 204163828.0
[2025-10-09 07:19:34] 2025-10-09 05:19:01,120 | INFO     | sum of deviations: -8153729761.000001
[2025-10-09 07:19:34] 2025-10-09 05:19:01,120 | INFO     | mean x: 1759984331.0
[2025-10-09 07:19:34] 2025-10-09 05:19:01,120 | INFO     | mean y: 2390025.528735632
[2025-10-09 07:19:34] 2025-10-09 05:19:01,120 | INFO     | -- intersect: 70291220124.112
[2025-10-09 07:19:34] 2025-10-09 05:19:01,120 | INFO     | intersect: 70291220124.112
[2025-10-09 07:19:34] 2025-10-09 05:19:01,120 | INFO     | chi2: 0.08783401406134626
[2025-10-09 07:19:34] 2025-10-09 05:19:01,120 | INFO     | -- intersect: 70291220124.112
[2025-10-09 07:19:34] 2025-10-09 05:19:01,120 | INFO     | current memory leak: -39.94 B/s (using 87 data points, chi2=0.09)
[2025-10-09 07:19:34] 2025-10-09 05:19:01,120 | INFO     | could have reported an average CPU frequency of 3712 MHz (7 samples)
[2025-10-09 07:19:34] 2025-10-09 05:19:01,120 | INFO     | ..............................
[2025-10-09 07:19:34] 2025-10-09 05:19:01,120 | INFO     | . Timing measurements:
[2025-10-09 07:19:34] 2025-10-09 05:19:01,120 | INFO     | . get job = 0 s
[2025-10-09 07:19:34] 2025-10-09 05:19:01,120 | INFO     | . initial setup = 10 s
[2025-10-09 07:19:34] 2025-10-09 05:19:01,120 | INFO     | . payload setup = 4 s
[2025-10-09 07:19:34] 2025-10-09 05:19:01,120 | INFO     | . stage-in = 0 s
[2025-10-09 07:19:34] 2025-10-09 05:19:01,120 | INFO     | . payload execution = 5729 s
[2025-10-09 07:19:34] 2025-10-09 05:19:01,121 | INFO     | . stage-out = 0 s
[2025-10-09 07:19:34] 2025-10-09 05:19:01,121 | INFO     | . log creation = 0 s
[2025-10-09 07:19:34] 2025-10-09 05:19:01,121 | INFO     | ..............................
[2025-10-09 07:19:34] 2025-10-09 05:19:01,173 | INFO     | 
[2025-10-09 07:19:34] 2025-10-09 05:19:01,173 | INFO     | job summary report
[2025-10-09 07:19:34] 2025-10-09 05:19:01,173 | INFO     | --------------------------------------------------
[2025-10-09 07:19:34] 2025-10-09 05:19:01,173 | INFO     | PanDA job id: 6833982564
[2025-10-09 07:19:34] 2025-10-09 05:19:01,173 | INFO     | task id: 46376905
[2025-10-09 07:19:34] 2025-10-09 05:19:01,173 | INFO     | errors: (none)
[2025-10-09 07:19:34] 2025-10-09 05:19:01,173 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 07:19:34] 2025-10-09 05:19:01,173 | INFO     | pilot state: finished 
[2025-10-09 07:19:34] 2025-10-09 05:19:01,173 | INFO     | transexitcode: 0
[2025-10-09 07:19:34] 2025-10-09 05:19:01,173 | INFO     | exeerrorcode: 0
[2025-10-09 07:19:34] 2025-10-09 05:19:01,173 | INFO     | exeerrordiag: 
[2025-10-09 07:19:34] 2025-10-09 05:19:01,173 | INFO     | exitcode: 0
[2025-10-09 07:19:34] 2025-10-09 05:19:01,173 | INFO     | exitmsg: OK
[2025-10-09 07:19:34] 2025-10-09 05:19:01,174 | INFO     | cpuconsumptiontime: 20320 s
[2025-10-09 07:19:34] 2025-10-09 05:19:01,174 | INFO     | nevents: 400
[2025-10-09 07:19:34] 2025-10-09 05:19:01,174 | INFO     | neventsw: 0
[2025-10-09 07:19:34] 2025-10-09 05:19:01,174 | INFO     | pid: 1217534
[2025-10-09 07:19:34] 2025-10-09 05:19:01,174 | INFO     | pgrp: 1217534
[2025-10-09 07:19:34] 2025-10-09 05:19:01,174 | INFO     | corecount: 4
[2025-10-09 07:19:34] 2025-10-09 05:19:01,174 | INFO     | event service: False
[2025-10-09 07:19:34] 2025-10-09 05:19:01,174 | INFO     | sizes: {0: 2348772, 4: 2349034, 11: 2349062, 5737: 2375866, 5738: 2384933, 5739: 2384933, 5745: 2385255}
[2025-10-09 07:19:34] 2025-10-09 05:19:01,174 | INFO     | --------------------------------------------------
[2025-10-09 07:19:34] 2025-10-09 05:19:01,174 | INFO     | 
[2025-10-09 07:19:34] 2025-10-09 05:19:01,174 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2025-10-09 07:19:34] 2025-10-09 05:19:01,192 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 07:19:34] 2025-10-09 05:19:01,192 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 07:19:34] 2025-10-09 05:19:01,192 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 07:19:34] 2025-10-09 05:19:01,192 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 07:19:34] 2025-10-09 05:19:01,192 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 07:19:34] 2025-10-09 05:19:01,192 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 07:19:34] 2025-10-09 05:19:01,192 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 07:19:34] 2025-10-09 05:19:01,192 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 07:19:34] 2025-10-09 05:19:01,192 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 07:19:34] 2025-10-09 05:19:01,193 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 07:19:34] 2025-10-09 05:19:01,193 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 07:19:34] 2025-10-09 05:19:01,193 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 07:19:34] 2025-10-09 05:19:01,193 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 07:19:34] 2025-10-09 05:19:01,193 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 07:19:34] 2025-10-09 05:19:01,193 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 07:19:34] 2025-10-09 05:19:01,193 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 07:19:34] 2025-10-09 05:19:01,193 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 07:19:34] 2025-10-09 05:19:01,193 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 07:19:34] 2025-10-09 05:19:01,193 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 07:19:34] 2025-10-09 05:19:01,193 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 07:19:34] 2025-10-09 05:19:01,193 | INFO     | job 6833982564 has completed (purged errors)
[2025-10-09 07:19:34] 2025-10-09 05:19:01,193 | INFO     | overall cleanup function is called
[2025-10-09 07:19:34] 2025-10-09 05:19:02,201 | INFO     | --- collectZombieJob: --- 10, [1217534]
[2025-10-09 07:19:34] 2025-10-09 05:19:02,201 | INFO     | zombie collector waiting for pid 1217534
[2025-10-09 07:19:34] 2025-10-09 05:19:02,201 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 07:19:34] 2025-10-09 05:19:02,201 | INFO     | collected zombie processes
[2025-10-09 07:19:34] 2025-10-09 05:19:02,201 | INFO     | will attempt to kill all subprocesses of pid=1217534
[2025-10-09 07:19:34] 2025-10-09 05:19:02,281 | INFO     | process IDs to be killed: [1217534] (in reverse order)
[2025-10-09 07:19:34] 2025-10-09 05:19:02,331 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 07:19:34] 2025-10-09 05:19:02,332 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 07:19:34] 2025-10-09 05:19:02,335 | INFO     | did not find any defunct processes belonging to 1217534
[2025-10-09 07:19:34] 2025-10-09 05:19:02,338 | INFO     | did not find any defunct processes belonging to 1217534
[2025-10-09 07:19:34] 2025-10-09 05:19:02,338 | INFO     | ready for new job
[2025-10-09 07:19:34] 2025-10-09 05:19:02,338 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 07:19:34] 2025-10-09 05:19:02,340 | INFO     | ***************************************
[2025-10-09 07:19:34] 2025-10-09 05:19:02,340 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-09 07:19:34] 2025-10-09 05:19:02,340 | INFO     | ***************************************
[2025-10-09 07:19:34] 2025-10-09 05:19:02,340 | INFO     | 
[2025-10-09 07:19:34] 2025-10-09 05:19:02,341 | INFO     | architecture information:
[2025-10-09 07:19:34] 2025-10-09 05:19:02,341 | INFO     | executing command: cat /etc/os-release
[2025-10-09 07:19:34] 2025-10-09 05:19:02,361 | INFO     | cat /etc/os-release:
[2025-10-09 07:19:34] NAME="CentOS Linux"
[2025-10-09 07:19:34] VERSION="7 (Core)"
[2025-10-09 07:19:34] ID="centos"
[2025-10-09 07:19:34] ID_LIKE="rhel fedora"
[2025-10-09 07:19:34] VERSION_ID="7"
[2025-10-09 07:19:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 07:19:34] ANSI_COLOR="0;31"
[2025-10-09 07:19:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 07:19:34] HOME_URL="https://www.centos.org/"
[2025-10-09 07:19:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 07:19:34] 
[2025-10-09 07:19:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 07:19:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 07:19:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 07:19:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 07:19:34] 
[2025-10-09 07:19:34] 2025-10-09 05:19:02,361 | INFO     | ***************************************
[2025-10-09 07:19:34] 2025-10-09 05:19:02,864 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2025-10-09 07:19:34] 2025-10-09 05:19:02,880 | INFO     | sufficient remaining disk space (3171189522432 B)
[2025-10-09 07:19:34] 2025-10-09 05:19:02,880 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 07:19:34] 2025-10-09 05:19:02,880 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 07:19:34] 2025-10-09 05:19:02,880 | INFO     | update_server=False
[2025-10-09 07:19:34] 2025-10-09 05:19:02,880 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 07:19:34] 2025-10-09 05:19:02,880 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 07:19:34] 2025-10-09 05:19:02,880 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 07:19:34] 2025-10-09 05:19:02,933 | INFO     | all data control threads have been joined
[2025-10-09 07:19:34] 2025-10-09 05:19:03,100 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 07:19:34] 2025-10-09 05:19:03,100 | INFO     | aborting loop
[2025-10-09 07:19:34] 2025-10-09 05:19:03,885 | INFO     | [job] queue monitor thread has finished
[2025-10-09 07:19:34] 2025-10-09 05:19:03,885 | INFO     | [job] retrieve thread has finished
[2025-10-09 07:19:34] 2025-10-09 05:19:03,935 | INFO     | [payload] validate_post thread has finished
[2025-10-09 07:19:34] 2025-10-09 05:19:03,938 | INFO     | [data] control thread has finished
[2025-10-09 07:19:34] 2025-10-09 05:19:04,105 | INFO     | [job] job monitor thread has finished
[2025-10-09 07:19:34] 2025-10-09 05:19:04,171 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 07:19:34] 2025-10-09 05:19:04,179 | INFO     | [job] validate thread has finished
[2025-10-09 07:19:34] 2025-10-09 05:19:04,180 | INFO     | all payload control threads have been joined
[2025-10-09 07:19:34] 2025-10-09 05:19:04,251 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 07:19:34] 2025-10-09 05:19:04,340 | INFO     | all job control threads have been joined
[2025-10-09 07:19:34] 2025-10-09 05:19:04,355 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 07:19:34] 2025-10-09 05:19:04,803 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 07:19:34] 2025-10-09 05:19:04,885 | INFO     | [data] copytool_out thread has finished
[2025-10-09 07:19:34] 2025-10-09 05:19:04,966 | INFO     | [payload] failed_post thread has finished
[2025-10-09 07:19:34] 2025-10-09 05:19:05,006 | INFO     | [data] copytool_in thread has finished
[2025-10-09 07:19:34] 2025-10-09 05:19:05,185 | INFO     | [payload] control thread has finished
[2025-10-09 07:19:34] 2025-10-09 05:19:05,346 | INFO     | [job] control thread has finished
[2025-10-09 07:19:34] 2025-10-09 05:19:08,809 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 07:19:34] 2025-10-09 05:19:10,172 | INFO     | [monitor] cgroup control has ended
[2025-10-09 07:19:34] 2025-10-09 05:19:13,104 | INFO     | job.realtimelogging is not enabled
[2025-10-09 07:19:34] 2025-10-09 05:19:14,109 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 07:19:34] 2025-10-09 05:19:15,244 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 125569647945536)>', '<ExcThread(monitor, started 125569106687744)>']
[2025-10-09 07:19:34] 2025-10-09 05:19:20,269 | INFO     | all workflow threads have been joined
[2025-10-09 07:19:34] 2025-10-09 05:19:20,269 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 07:19:34] 2025-10-09 05:19:20,269 | INFO     | traces error code: 0
[2025-10-09 07:19:34] 2025-10-09 05:19:20,269 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 07:19:34] 2025-10-09 05:19:33,853 | INFO     | PID=1210957 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-09 07:19:34] 2025-10-09 05:19:33,854 | INFO     | .. there are 2 such processes running
[2025-10-09 07:19:34] 2025-10-09 05:19:33,854 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 07:19:34] 2025-10-09 05:19:33,854 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 07:19:34] 2025-10-09 05:19:33,854 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 07:19:34] 2025-10-09 05:19:33,854 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 07:19:34] 2025-10-09 05:19:33,854 | INFO     | [monitor] control thread has ended
[2025-10-09 07:19:34] 2025-10-09 05:19:33,933 [wrapper] ==== pilot stdout END ====
[2025-10-09 07:19:34] 2025-10-09 05:19:33,936 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 07:19:34] 2025-10-09 05:19:33,938 [wrapper] pilotpid: 1210957
[2025-10-09 07:19:34] 2025-10-09 05:19:33,940 [wrapper] Pilot exit status: 0
[2025-10-09 07:19:34] 2025-10-09 05:19:34,024 [wrapper] pandaids: 6833982564
[2025-10-09 07:19:34] 2025-10-09 05:19:34,054 [wrapper] cleanup supervisor_pilot 1256983 1210958
[2025-10-09 07:19:34] 2025-10-09 05:19:34,057 [wrapper] Test setup, not cleaning
[2025-10-09 07:19:34] 2025-10-09 05:19:34,059 [wrapper] apfmon messages muted
[2025-10-09 07:19:34] 2025-10-09 05:19:34,061 [wrapper] ==== wrapper stdout END ====
[2025-10-09 07:19:34] 2025-10-09 05:19:34,063 [wrapper] ==== wrapper stderr END ====
[2025-10-09 07:19:34]  *** Error codes and diagnostics ***
[2025-10-09 07:19:34]     "exeErrorCode": 0,
[2025-10-09 07:19:34]     "exeErrorDiag": "",
[2025-10-09 07:19:34]     "pilotErrorCode": 0,
[2025-10-09 07:19:34]     "pilotErrorDiag": "",
[2025-10-09 07:19:34]  *** Listing of results directory ***
[2025-10-09 07:19:34] insgesamt 397068
[2025-10-09 07:19:34] -rw-r--r-- 1 boinc boinc    552446 Okt  7 12:56 pilot3.tar.gz
[2025-10-09 07:19:34] -rw-r--r-- 1 boinc boinc      5112 Okt  7 13:29 queuedata.json
[2025-10-09 07:19:34] -rwx------ 1 boinc boinc     36292 Okt  7 13:29 runpilot2-wrapper.sh
[2025-10-09 07:19:34] -rw-r--r-- 1 boinc boinc       100 Okt  9 05:42 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 07:19:34] -rwxr-xr-x 1 boinc boinc      7986 Okt  9 05:42 run_atlas
[2025-10-09 07:19:34] -rw-r--r-- 1 boinc boinc       105 Okt  9 05:42 job.xml
[2025-10-09 07:19:34] -rw-r--r-- 2 boinc boinc 218078745 Okt  9 05:42 EVNT.46376901._003385.pool.root.1
[2025-10-09 07:19:34] drwxrwx--x 2 boinc boinc      4096 Okt  9 05:42 shared
[2025-10-09 07:19:34] -rw-r--r-- 2 boinc boinc    565607 Okt  9 05:42 input.tar.gz
[2025-10-09 07:19:34] -rw-r--r-- 2 boinc boinc     15120 Okt  9 05:42 start_atlas.sh
[2025-10-09 07:19:34] -rw-r--r-- 1 boinc boinc         0 Okt  9 05:42 boinc_setup_complete
[2025-10-09 07:19:34] -rw-r--r-- 1 boinc boinc      8874 Okt  9 05:42 init_data.xml
[2025-10-09 07:19:34] -rw-r--r-- 1 boinc boinc         0 Okt  9 05:42 boinc_lockfile
[2025-10-09 07:19:34] -rw-r--r-- 1 boinc boinc      2518 Okt  9 05:42 pandaJob.out
[2025-10-09 07:19:34] -rw------- 1 boinc boinc    979306 Okt  9 05:42 agis_schedconf.cvmfs.json
[2025-10-09 07:19:34] -rw------- 1 boinc boinc   1560401 Okt  9 05:43 agis_ddmendpoints.agis.ALL.json
[2025-10-09 07:19:34] drwx------ 4 boinc boinc      4096 Okt  9 05:43 pilot3
[2025-10-09 07:19:34] -rw------- 1 boinc boinc 182370833 Okt  9 07:18 HITS.46376905._133705.pool.root.1
[2025-10-09 07:19:34] -rw------- 1 boinc boinc        95 Okt  9 07:18 pilot_heartbeat.json
[2025-10-09 07:19:34] -rw-r--r-- 1 boinc boinc       529 Okt  9 07:18 boinc_task_state.xml
[2025-10-09 07:19:34] -rw------- 1 boinc boinc      1030 Okt  9 07:18 memory_monitor_summary.json
[2025-10-09 07:19:34] -rw------- 1 boinc boinc    271238 Okt  9 07:18 log.46376905._133705.job.log.tgz.1
[2025-10-09 07:19:34] -rw------- 1 boinc boinc      7744 Okt  9 07:19 heartbeat.json
[2025-10-09 07:19:34] -rw-r--r-- 1 boinc boinc      8192 Okt  9 07:19 boinc_mmap_file
[2025-10-09 07:19:34] -rw-r--r-- 1 boinc boinc        27 Okt  9 07:19 wrapper_checkpoint.txt
[2025-10-09 07:19:34] -rw------- 1 boinc boinc       822 Okt  9 07:19 pilotlog.txt
[2025-10-09 07:19:34] -rw------- 1 boinc boinc    852489 Okt  9 07:19 log.46376905._133705.job.log.1
[2025-10-09 07:19:34] -rw------- 1 boinc boinc       357 Okt  9 07:19 output.list
[2025-10-09 07:19:34] -rw-r--r-- 1 boinc boinc       620 Okt  9 07:19 runtime_log
[2025-10-09 07:19:34] -rw------- 1 boinc boinc   1146880 Okt  9 07:19 result.tar.gz
[2025-10-09 07:19:34] -rw-r--r-- 1 boinc boinc      8731 Okt  9 07:19 runtime_log.err
[2025-10-09 07:19:34] -rw------- 1 boinc boinc       637 Okt  9 07:19 pD7LDmP4KQ8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmjwWNDmbSmZgn.diag
[2025-10-09 07:19:34] -rw-r--r-- 1 boinc boinc     22196 Okt  9 07:19 stderr.txt
[2025-10-09 07:19:34] HITS file was successfully produced:
[2025-10-09 07:19:34] -rw------- 1 boinc boinc 182370833 Okt  9 07:18 shared/HITS.pool.root.1
[2025-10-09 07:19:34]  *** Contents of shared directory: ***
[2025-10-09 07:19:34] insgesamt 392768
[2025-10-09 07:19:34] -rw-r--r-- 2 boinc boinc 218078745 Okt  9 05:42 ATLAS.root_0
[2025-10-09 07:19:34] -rw-r--r-- 2 boinc boinc    565607 Okt  9 05:42 input.tar.gz
[2025-10-09 07:19:34] -rw-r--r-- 2 boinc boinc     15120 Okt  9 05:42 start_atlas.sh
[2025-10-09 07:19:34] -rw------- 1 boinc boinc 182370833 Okt  9 07:18 HITS.pool.root.1
[2025-10-09 07:19:34] -rw------- 1 boinc boinc   1146880 Okt  9 07:19 result.tar.gz
07:19:36 (1207163): run_atlas exited; CPU time 20315.336128
07:19:36 (1207163): called boinc_finish(0)

</stderr_txt>
]]>

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