Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
11:12:52 (12419): wrapper (7.7.26015): starting
11:12:52 (12419): wrapper: running run_atlas (--nthreads 12)
[2025-10-08 11:12:52] Arguments: --nthreads 12
[2025-10-08 11:12:52] Threads: 12
[2025-10-08 11:12:52] Checking for CVMFS
[2025-10-08 11:12:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 11:12:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 11:12:52] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 11:12:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 11:12:52] 2.11.2.0 14820 72630 90920 151475 1 1 19557173 20275200 1 130560 0 43642111 99.990 2305328 45697 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-08 11:12:52] CVMFS is ok
[2025-10-08 11:12:52] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-08 11:12:52] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-08 11:12:52] Further information can be found at the LHC@home message board.
[2025-10-08 11:12:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 11:12:52] Checking for apptainer binary...
[2025-10-08 11:12:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 11:12:52] Running /usr/bin/apptainer --version
[2025-10-08 11:12:52] apptainer version 1.3.2-1.el7
[2025-10-08 11:12:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 11:12:54] c-205-27.aglt2.org
[2025-10-08 11:12:54] apptainer works
[2025-10-08 11:12:54] Set ATHENA_PROC_NUMBER=12
[2025-10-08 11:12:54] Set ATHENA_CORE_NUMBER=12
[2025-10-08 11:12:54] Starting ATLAS job with PandaID=6826041468
[2025-10-08 11:12:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-08 12:46:48]  *** The last 200 lines of the pilot log: ***
[2025-10-08 12:46:48]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-08 12:46:48]  replicas=None
[2025-10-08 12:46:48]  scope=mc23_13p6TeV
[2025-10-08 12:46:48]  status=None
[2025-10-08 12:46:48]  status_code=0
[2025-10-08 12:46:48]  storage_token=
[2025-10-08 12:46:48]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6826041468/log.46373048._061810.job.log.tgz.1
[2025-10-08 12:46:48]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a8/36/log.46373048._061810.job.log.tgz.1
[2025-10-08 12:46:48]  workdir=None
[2025-10-08 12:46:48] ]
[2025-10-08 12:46:48] 2025-10-08 16:46:09,355 | INFO     | transferring file log.46373048._061810.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6826041468/log.46373048._061810.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-08 12:46:48] 2025-10-08 16:46:09,356 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6826041468/log.46373048._061810.job.log.tgz.1 /tmp/boinchome/slots/0/log.46373048._061810.job
[2025-10-08 12:46:48] 2025-10-08 16:46:09,379 | INFO     | adding to output.list: log.46373048._061810.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a8/36/log.46373048._061810.job.log.tg
[2025-10-08 12:46:48] 2025-10-08 16:46:09,380 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-08 12:46:48] 2025-10-08 16:46:09,380 | INFO     | summary of transferred files:
[2025-10-08 12:46:48] 2025-10-08 16:46:09,380 | INFO     |  -- lfn=log.46373048._061810.job.log.tgz.1, status_code=0, status=transferred
[2025-10-08 12:46:48] 2025-10-08 16:46:09,381 | INFO     | stage-out finished correctly
[2025-10-08 12:46:48] 2025-10-08 16:46:09,719 | INFO     | monitor loop #417: job 0:6826041468 is in state 'finished'
[2025-10-08 12:46:48] 2025-10-08 16:46:09,719 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 12:46:48] 2025-10-08 16:46:11,078 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-08 12:46:48] 2025-10-08 16:46:11,200 | INFO     | job 6826041468 has state=finished
[2025-10-08 12:46:48] 2025-10-08 16:46:11,200 | INFO     | preparing for final server update for job 6826041468 in state='finished'
[2025-10-08 12:46:48] 2025-10-08 16:46:11,201 | INFO     | this job has now completed (state=finished)
[2025-10-08 12:46:48] 2025-10-08 16:46:11,201 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-08 12:46:48] 2025-10-08 16:46:11,201 | INFO     | log transfer has been attempted: DONE
[2025-10-08 12:46:48] 2025-10-08 16:46:11,201 | INFO     | job 6826041468 has finished - writing final server update
[2025-10-08 12:46:48] 2025-10-08 16:46:11,202 | INFO     | total number of processed events: 400 (read)
[2025-10-08 12:46:48] 2025-10-08 16:46:11,203 | INFO     | executing command: lscpu
[2025-10-08 12:46:48] 2025-10-08 16:46:11,230 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-08 12:46:48] 2025-10-08 16:46:11,270 | INFO     | time since job start (5582s) is within the limit (172800.0s)
[2025-10-08 12:46:48] 2025-10-08 16:46:12,222 | INFO     | monitor loop #418: job 0:6826041468 is in state 'finished'
[2025-10-08 12:46:48] 2025-10-08 16:46:12,222 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 12:46:48] 2025-10-08 16:46:13,285 | INFO     | time since job start (5584s) is within the limit (172800.0s)
[2025-10-08 12:46:48] 2025-10-08 16:46:14,725 | INFO     | monitor loop #419: job 0:6826041468 is in state 'finished'
[2025-10-08 12:46:48] 2025-10-08 16:46:14,725 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 12:46:48] 2025-10-08 16:46:15,290 | INFO     | time since job start (5586s) is within the limit (172800.0s)
[2025-10-08 12:46:48] 2025-10-08 16:46:15,846 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-08 12:46:48] 2025-10-08 16:46:15,850 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1806.5833333333333
[2025-10-08 12:46:48] 2025-10-08 16:46:15,852 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6826041468/memory_monitor_summary.json (trf name=prmon)
[2025-10-08 12:46:48] 2025-10-08 16:46:15,853 | INFO     | extracted standard info from prmon json
[2025-10-08 12:46:48] 2025-10-08 16:46:15,853 | INFO     | extracted standard memory fields from prmon json
[2025-10-08 12:46:48] 2025-10-08 16:46:15,853 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-08 12:46:48] 2025-10-08 16:46:15,854 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-08 12:46:48] 2025-10-08 16:46:15,854 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-08 12:46:48] 2025-10-08 16:46:15,856 | INFO     | fitting pss+swap vs Time
[2025-10-08 12:46:48] 2025-10-08 16:46:15,857 | INFO     | sum of square deviations: 183761585.0
[2025-10-08 12:46:48] 2025-10-08 16:46:15,857 | INFO     | sum of deviations: -2425760038.0000005
[2025-10-08 12:46:48] 2025-10-08 16:46:15,857 | INFO     | mean x: 1759939255.5
[2025-10-08 12:46:48] 2025-10-08 16:46:15,858 | INFO     | mean y: 2750340.9523809524
[2025-10-08 12:46:48] 2025-10-08 16:46:15,858 | INFO     | -- intersect: 23234974395.28546
[2025-10-08 12:46:48] 2025-10-08 16:46:15,858 | INFO     | intersect: 23234974395.28546
[2025-10-08 12:46:48] 2025-10-08 16:46:15,858 | INFO     | chi2: 0.05721362042654461
[2025-10-08 12:46:48] 2025-10-08 16:46:15,858 | INFO     | -- intersect: 23234974395.28546
[2025-10-08 12:46:48] 2025-10-08 16:46:15,858 | INFO     | current memory leak: -13.20 B/s (using 84 data points, chi2=0.06)
[2025-10-08 12:46:48] 2025-10-08 16:46:15,859 | INFO     | could have reported an average CPU frequency of 2028 MHz (7 samples)
[2025-10-08 12:46:48] 2025-10-08 16:46:15,859 | INFO     | ..............................
[2025-10-08 12:46:48] 2025-10-08 16:46:15,859 | INFO     | . Timing measurements:
[2025-10-08 12:46:48] 2025-10-08 16:46:15,859 | INFO     | . get job = 0 s
[2025-10-08 12:46:48] 2025-10-08 16:46:15,859 | INFO     | . initial setup = 3 s
[2025-10-08 12:46:48] 2025-10-08 16:46:15,859 | INFO     | . payload setup = 7 s
[2025-10-08 12:46:48] 2025-10-08 16:46:15,859 | INFO     | . stage-in = 0 s
[2025-10-08 12:46:48] 2025-10-08 16:46:15,859 | INFO     | . payload execution = 5550 s
[2025-10-08 12:46:48] 2025-10-08 16:46:15,860 | INFO     | . stage-out = 0 s
[2025-10-08 12:46:48] 2025-10-08 16:46:15,860 | INFO     | . log creation = 0 s
[2025-10-08 12:46:48] 2025-10-08 16:46:15,860 | INFO     | ..............................
[2025-10-08 12:46:48] 2025-10-08 16:46:15,944 | INFO     | 
[2025-10-08 12:46:48] 2025-10-08 16:46:15,944 | INFO     | job summary report
[2025-10-08 12:46:48] 2025-10-08 16:46:15,944 | INFO     | --------------------------------------------------
[2025-10-08 12:46:48] 2025-10-08 16:46:15,944 | INFO     | PanDA job id: 6826041468
[2025-10-08 12:46:48] 2025-10-08 16:46:15,945 | INFO     | task id: 46373048
[2025-10-08 12:46:48] 2025-10-08 16:46:15,945 | INFO     | errors: (none)
[2025-10-08 12:46:48] 2025-10-08 16:46:15,945 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-08 12:46:48] 2025-10-08 16:46:15,945 | INFO     | pilot state: finished 
[2025-10-08 12:46:48] 2025-10-08 16:46:15,945 | INFO     | transexitcode: 0
[2025-10-08 12:46:48] 2025-10-08 16:46:15,945 | INFO     | exeerrorcode: 0
[2025-10-08 12:46:48] 2025-10-08 16:46:15,945 | INFO     | exeerrordiag: 
[2025-10-08 12:46:48] 2025-10-08 16:46:15,946 | INFO     | exitcode: 0
[2025-10-08 12:46:48] 2025-10-08 16:46:15,946 | INFO     | exitmsg: OK
[2025-10-08 12:46:48] 2025-10-08 16:46:15,946 | INFO     | cpuconsumptiontime: 60552 s
[2025-10-08 12:46:48] 2025-10-08 16:46:15,946 | INFO     | nevents: 400
[2025-10-08 12:46:48] 2025-10-08 16:46:15,946 | INFO     | neventsw: 0
[2025-10-08 12:46:48] 2025-10-08 16:46:15,946 | INFO     | pid: 22605
[2025-10-08 12:46:48] 2025-10-08 16:46:15,947 | INFO     | pgrp: 22605
[2025-10-08 12:46:48] 2025-10-08 16:46:15,947 | INFO     | corecount: 12
[2025-10-08 12:46:48] 2025-10-08 16:46:15,947 | INFO     | event service: False
[2025-10-08 12:46:48] 2025-10-08 16:46:15,947 | INFO     | sizes: {0: 2348670, 1: 2348869, 6: 2349131, 11: 2349159, 5562: 2375750, 5564: 2384748, 5565: 2384932, 5570: 2385126}
[2025-10-08 12:46:48] 2025-10-08 16:46:15,947 | INFO     | --------------------------------------------------
[2025-10-08 12:46:48] 2025-10-08 16:46:15,947 | INFO     | 
[2025-10-08 12:46:48] 2025-10-08 16:46:15,947 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-08 12:46:48] 2025-10-08 16:46:15,970 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-08 12:46:48] 2025-10-08 16:46:15,971 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-08 12:46:48] 2025-10-08 16:46:15,971 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-08 12:46:48] 2025-10-08 16:46:15,971 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-08 12:46:48] 2025-10-08 16:46:15,971 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-08 12:46:48] 2025-10-08 16:46:15,971 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-08 12:46:48] 2025-10-08 16:46:15,971 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-08 12:46:48] 2025-10-08 16:46:15,972 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-08 12:46:48] 2025-10-08 16:46:15,972 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-08 12:46:48] 2025-10-08 16:46:15,972 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-08 12:46:48] 2025-10-08 16:46:15,972 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-08 12:46:48] 2025-10-08 16:46:15,972 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-08 12:46:48] 2025-10-08 16:46:15,972 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-08 12:46:48] 2025-10-08 16:46:15,972 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-08 12:46:48] 2025-10-08 16:46:15,973 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-08 12:46:48] 2025-10-08 16:46:15,973 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-08 12:46:48] 2025-10-08 16:46:15,973 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-08 12:46:48] 2025-10-08 16:46:15,973 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-08 12:46:48] 2025-10-08 16:46:15,973 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-08 12:46:48] 2025-10-08 16:46:15,973 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-08 12:46:48] 2025-10-08 16:46:15,974 | INFO     | job 6826041468 has completed (purged errors)
[2025-10-08 12:46:48] 2025-10-08 16:46:15,974 | INFO     | overall cleanup function is called
[2025-10-08 12:46:48] 2025-10-08 16:46:16,982 | INFO     | --- collectZombieJob: --- 10, [22605]
[2025-10-08 12:46:48] 2025-10-08 16:46:16,982 | INFO     | zombie collector waiting for pid 22605
[2025-10-08 12:46:48] 2025-10-08 16:46:16,982 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-08 12:46:48] 2025-10-08 16:46:16,983 | INFO     | collected zombie processes
[2025-10-08 12:46:48] 2025-10-08 16:46:16,983 | INFO     | will attempt to kill all subprocesses of pid=22605
[2025-10-08 12:46:48] 2025-10-08 16:46:17,074 | INFO     | process IDs to be killed: [22605] (in reverse order)
[2025-10-08 12:46:48] 2025-10-08 16:46:17,126 | WARNING  | found no corresponding commands to process id(s)
[2025-10-08 12:46:48] 2025-10-08 16:46:17,126 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-08 12:46:48] 2025-10-08 16:46:17,129 | INFO     | did not find any defunct processes belonging to 22605
[2025-10-08 12:46:48] 2025-10-08 16:46:17,131 | INFO     | did not find any defunct processes belonging to 22605
[2025-10-08 12:46:48] 2025-10-08 16:46:17,132 | INFO     | ready for new job
[2025-10-08 12:46:48] 2025-10-08 16:46:17,132 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-08 12:46:48] 2025-10-08 16:46:17,133 | INFO     | ***************************************
[2025-10-08 12:46:48] 2025-10-08 16:46:17,133 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-08 12:46:48] 2025-10-08 16:46:17,133 | INFO     | ***************************************
[2025-10-08 12:46:48] 2025-10-08 16:46:17,133 | INFO     | 
[2025-10-08 12:46:48] 2025-10-08 16:46:17,134 | INFO     | architecture information:
[2025-10-08 12:46:48] 2025-10-08 16:46:17,134 | INFO     | executing command: cat /etc/os-release
[2025-10-08 12:46:48] 2025-10-08 16:46:17,150 | INFO     | cat /etc/os-release:
[2025-10-08 12:46:48] NAME="CentOS Linux"
[2025-10-08 12:46:48] VERSION="7 (Core)"
[2025-10-08 12:46:48] ID="centos"
[2025-10-08 12:46:48] ID_LIKE="rhel fedora"
[2025-10-08 12:46:48] VERSION_ID="7"
[2025-10-08 12:46:48] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-08 12:46:48] ANSI_COLOR="0;31"
[2025-10-08 12:46:48] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-08 12:46:48] HOME_URL="https://www.centos.org/"
[2025-10-08 12:46:48] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-08 12:46:48] 
[2025-10-08 12:46:48] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-08 12:46:48] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-08 12:46:48] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-08 12:46:48] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-08 12:46:48] 
[2025-10-08 12:46:48] 2025-10-08 16:46:17,151 | INFO     | ***************************************
[2025-10-08 12:46:48] 2025-10-08 16:46:17,652 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-08 12:46:48] 2025-10-08 16:46:17,684 | INFO     | sufficient remaining disk space (29358030848 B)
[2025-10-08 12:46:48] 2025-10-08 16:46:17,685 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-08 12:46:48] 2025-10-08 16:46:17,685 | INFO     | current server update state: UPDATING_FINAL
[2025-10-08 12:46:48] 2025-10-08 16:46:17,685 | INFO     | update_server=False
[2025-10-08 12:46:48] 2025-10-08 16:46:17,685 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-08 12:46:48] 2025-10-08 16:46:17,686 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-08 12:46:48] 2025-10-08 16:46:17,686 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-08 12:46:48] 2025-10-08 16:46:17,687 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-08 12:46:48] 2025-10-08 16:46:18,234 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-08 12:46:48] 2025-10-08 16:46:18,234 | INFO     | aborting loop
[2025-10-08 12:46:48] 2025-10-08 16:46:18,441 | INFO     | [monitor] cgroup control has ended
[2025-10-08 12:46:48] 2025-10-08 16:46:18,450 | INFO     | all job control threads have been joined
[2025-10-08 12:46:48] 2025-10-08 16:46:18,594 | INFO     | all data control threads have been joined
[2025-10-08 12:46:48] 2025-10-08 16:46:18,690 | INFO     | [job] queue monitor thread has finished
[2025-10-08 12:46:48] 2025-10-08 16:46:18,691 | INFO     | [job] retrieve thread has finished
[2025-10-08 12:46:48] 2025-10-08 16:46:18,809 | INFO     | [payload] validate_pre thread has finished
[2025-10-08 12:46:48] 2025-10-08 16:46:18,903 | INFO     | all payload control threads have been joined
[2025-10-08 12:46:48] 2025-10-08 16:46:19,013 | INFO     | [payload] failed_post thread has finished
[2025-10-08 12:46:48] 2025-10-08 16:46:19,061 | INFO     | [payload] execute_payloads thread has finished
[2025-10-08 12:46:48] 2025-10-08 16:46:19,239 | INFO     | [job] job monitor thread has finished
[2025-10-08 12:46:48] 2025-10-08 16:46:19,276 | INFO     | [data] copytool_in thread has finished
[2025-10-08 12:46:48] 2025-10-08 16:46:19,452 | INFO     | [job] control thread has finished
[2025-10-08 12:46:48] 2025-10-08 16:46:19,599 | INFO     | [data] control thread has finished
[2025-10-08 12:46:48] 2025-10-08 16:46:19,691 | INFO     | [data] copytool_out thread has finished
[2025-10-08 12:46:48] 2025-10-08 16:46:19,746 | INFO     | [job] validate thread has finished
[2025-10-08 12:46:48] 2025-10-08 16:46:19,867 | INFO     | [payload] validate_post thread has finished
[2025-10-08 12:46:48] 2025-10-08 16:46:19,909 | INFO     | [payload] control thread has finished
[2025-10-08 12:46:48] 2025-10-08 16:46:20,029 | INFO     | [job] create_data_payload thread has finished
[2025-10-08 12:46:48] 2025-10-08 16:46:21,693 | INFO     | [data] queue_monitor thread has finished
[2025-10-08 12:46:48] 2025-10-08 16:46:28,242 | INFO     | job.realtimelogging is not enabled
[2025-10-08 12:46:48] 2025-10-08 16:46:29,247 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-08 12:46:48] 2025-10-08 16:46:30,956 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140146598078272)>', '<ExcThread(monitor, started 140145680426752)>']
[2025-10-08 12:46:48] 2025-10-08 16:46:35,968 | INFO     | all workflow threads have been joined
[2025-10-08 12:46:48] 2025-10-08 16:46:35,968 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-08 12:46:48] 2025-10-08 16:46:35,968 | INFO     | traces error code: 0
[2025-10-08 12:46:48] 2025-10-08 16:46:35,969 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-08 12:46:48] 2025-10-08 16:46:48,480 | INFO     | PID=16248 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-08 12:46:48] 2025-10-08 16:46:48,480 | INFO     | found 0 job(s) in 20 queues
[2025-10-08 12:46:48] 2025-10-08 16:46:48,480 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-08 12:46:48] 2025-10-08 16:46:48,480 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-08 12:46:48] 2025-10-08 16:46:48,481 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-08 12:46:48] 2025-10-08 16:46:48,481 | INFO     | [monitor] control thread has ended
[2025-10-08 12:46:48] 2025-10-08 16:46:48,566 [wrapper] ==== pilot stdout END ====
[2025-10-08 12:46:48] 2025-10-08 16:46:48,570 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-08 12:46:48] 2025-10-08 16:46:48,575 [wrapper] pilotpid: 16248
[2025-10-08 12:46:48] 2025-10-08 16:46:48,578 [wrapper] Pilot exit status: 0
[2025-10-08 12:46:48] 2025-10-08 16:46:48,594 [wrapper] pandaids: 6826041468
[2025-10-08 12:46:48] 2025-10-08 16:46:48,634 [wrapper] cleanup supervisor_pilot 21010 16249
[2025-10-08 12:46:48] 2025-10-08 16:46:48,637 [wrapper] Test setup, not cleaning
[2025-10-08 12:46:48] 2025-10-08 16:46:48,641 [wrapper] apfmon messages muted
[2025-10-08 12:46:48] 2025-10-08 16:46:48,645 [wrapper] ==== wrapper stdout END ====
[2025-10-08 12:46:48] 2025-10-08 16:46:48,649 [wrapper] ==== wrapper stderr END ====
[2025-10-08 12:46:48]  *** Error codes and diagnostics ***
[2025-10-08 12:46:48]     "exeErrorCode": 0,
[2025-10-08 12:46:48]     "exeErrorDiag": "",
[2025-10-08 12:46:48]     "pilotErrorCode": 0,
[2025-10-08 12:46:48]     "pilotErrorDiag": "",
[2025-10-08 12:46:48]  *** Listing of results directory ***
[2025-10-08 12:46:48] total 416848
[2025-10-08 12:46:48] -rw-r--r-- 1 boincer umatlas    552446 Sep 30 10:02 pilot3.tar.gz
[2025-10-08 12:46:48] -rwx------ 1 boincer umatlas     36292 Sep 30 10:06 runpilot2-wrapper.sh
[2025-10-08 12:46:48] -rw-r--r-- 1 boincer umatlas      5112 Sep 30 10:06 queuedata.json
[2025-10-08 12:46:48] -rw-r--r-- 1 boincer umatlas       100 Oct  8 11:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-08 12:46:48] -rwxr-xr-x 1 boincer umatlas      7986 Oct  8 11:12 run_atlas
[2025-10-08 12:46:48] -rw-r--r-- 1 boincer umatlas       105 Oct  8 11:12 job.xml
[2025-10-08 12:46:48] -rw-r--r-- 2 boincer umatlas 222710342 Oct  8 11:12 EVNT.46373045._001961.pool.root.1
[2025-10-08 12:46:48] -rw-r--r-- 2 boincer umatlas     15120 Oct  8 11:12 start_atlas.sh
[2025-10-08 12:46:48] drwxrwx--x 2 boincer umatlas      4096 Oct  8 11:12 shared
[2025-10-08 12:46:48] -rw-r--r-- 2 boincer umatlas    565602 Oct  8 11:12 input.tar.gz
[2025-10-08 12:46:48] -rw-r--r-- 1 boincer umatlas         0 Oct  8 11:12 boinc_lockfile
[2025-10-08 12:46:48] -rw-r--r-- 1 boincer umatlas      2538 Oct  8 11:12 pandaJob.out
[2025-10-08 12:46:48] -rw------- 1 boincer umatlas    979287 Oct  8 11:13 agis_schedconf.cvmfs.json
[2025-10-08 12:46:48] -rw------- 1 boincer umatlas   1560401 Oct  8 11:13 agis_ddmendpoints.agis.ALL.json
[2025-10-08 12:46:48] drwx------ 4 boincer umatlas      4096 Oct  8 11:13 pilot3
[2025-10-08 12:46:48] -rw-r--r-- 1 boincer umatlas      5953 Oct  8 12:45 init_data.xml
[2025-10-08 12:46:48] -rw------- 1 boincer umatlas 197854320 Oct  8 12:45 HITS.46373048._061810.pool.root.1
[2025-10-08 12:46:48] -rw-r--r-- 1 boincer umatlas       529 Oct  8 12:45 boinc_task_state.xml
[2025-10-08 12:46:48] -rw------- 1 boincer umatlas      1047 Oct  8 12:46 memory_monitor_summary.json
[2025-10-08 12:46:48] -rw------- 1 boincer umatlas    404541 Oct  8 12:46 log.46373048._061810.job.log.tgz.1
[2025-10-08 12:46:48] -rw------- 1 boincer umatlas      7852 Oct  8 12:46 heartbeat.json
[2025-10-08 12:46:48] -rw-r--r-- 1 boincer umatlas        27 Oct  8 12:46 wrapper_checkpoint.txt
[2025-10-08 12:46:48] -rw-r--r-- 1 boincer umatlas      8192 Oct  8 12:46 boinc_mmap_file
[2025-10-08 12:46:48] -rw------- 1 boincer umatlas        95 Oct  8 12:46 pilot_heartbeat.json
[2025-10-08 12:46:48] -rw------- 1 boincer umatlas       745 Oct  8 12:46 pilotlog.txt
[2025-10-08 12:46:48] -rw------- 1 boincer umatlas    797072 Oct  8 12:46 log.46373048._061810.job.log.1
[2025-10-08 12:46:48] -rw------- 1 boincer umatlas       357 Oct  8 12:46 output.list
[2025-10-08 12:46:48] -rw-r--r-- 1 boincer umatlas       620 Oct  8 12:46 runtime_log
[2025-10-08 12:46:48] -rw------- 1 boincer umatlas   1218560 Oct  8 12:46 result.tar.gz
[2025-10-08 12:46:48] -rw------- 1 boincer umatlas       660 Oct  8 12:46 sepNDm8AqN8n9Rq4apOajLDm4fhM0noT9bVof3QYDmfE6LDmgaPnSo.diag
[2025-10-08 12:46:48] -rw-r--r-- 1 boincer umatlas      8705 Oct  8 12:46 runtime_log.err
[2025-10-08 12:46:48] -rw-r--r-- 1 boincer umatlas     21861 Oct  8 12:46 stderr.txt
[2025-10-08 12:46:48] HITS file was successfully produced:
[2025-10-08 12:46:48] -rw------- 1 boincer umatlas 197854320 Oct  8 12:45 shared/HITS.pool.root.1
[2025-10-08 12:46:48]  *** Contents of shared directory: ***
[2025-10-08 12:46:48] total 412480
[2025-10-08 12:46:48] -rw-r--r-- 2 boincer umatlas 222710342 Oct  8 11:12 ATLAS.root_0
[2025-10-08 12:46:48] -rw-r--r-- 2 boincer umatlas     15120 Oct  8 11:12 start_atlas.sh
[2025-10-08 12:46:48] -rw-r--r-- 2 boincer umatlas    565602 Oct  8 11:12 input.tar.gz
[2025-10-08 12:46:48] -rw------- 1 boincer umatlas 197854320 Oct  8 12:45 HITS.pool.root.1
[2025-10-08 12:46:48] -rw------- 1 boincer umatlas   1218560 Oct  8 12:46 result.tar.gz
12:46:50 (12419): run_atlas exited; CPU time 60518.967987
12:46:50 (12419): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN