Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
10:41:07 (13545): wrapper (7.7.26015): starting
10:41:07 (13545): wrapper: running run_atlas (--nthreads 8)
[2025-10-08 10:41:07] Arguments: --nthreads 8
[2025-10-08 10:41:07] Threads: 8
[2025-10-08 10:41:07] Checking for CVMFS
[2025-10-08 10:41:07] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 10:41:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 10:41:08] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 10:41:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 10:41:08] 2.11.2.0 1598 210576 124272 151475 0 59 15193377 20275200 1 130560 1 210424829 99.992 11514424 11042 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-08 10:41:08] CVMFS is ok
[2025-10-08 10:41:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-08 10:41:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-08 10:41:08] Further information can be found at the LHC@home message board.
[2025-10-08 10:41:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 10:41:08] Checking for apptainer binary...
[2025-10-08 10:41:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 10:41:08] Running /usr/bin/apptainer --version
[2025-10-08 10:41:08] apptainer version 1.3.2-1.el7
[2025-10-08 10:41:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 10:41:09] c-205-36.aglt2.org
[2025-10-08 10:41:09] apptainer works
[2025-10-08 10:41:09] Set ATHENA_PROC_NUMBER=8
[2025-10-08 10:41:09] Set ATHENA_CORE_NUMBER=8
[2025-10-08 10:41:09] Starting ATLAS job with PandaID=6826040249
[2025-10-08 10:41:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-08 11:57:35]  *** The last 200 lines of the pilot log: ***
[2025-10-08 11:57:35]  status_code=0
[2025-10-08 11:57:35]  storage_token=
[2025-10-08 11:57:35]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6826040249/log.46373048._061016.job.log.tgz.1
[2025-10-08 11:57:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/38/87/log.46373048._061016.job.log.tgz.1
[2025-10-08 11:57:35]  workdir=None
[2025-10-08 11:57:35] ]
[2025-10-08 11:57:35] 2025-10-08 15:56:52,080 | INFO     | transferring file log.46373048._061016.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6826040249/log.46373048._061016.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-08 11:57:35] 2025-10-08 15:56:52,080 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6826040249/log.46373048._061016.job.log.tgz.1 /tmp/boinchome/slots/0/log.46373048._061016.job
[2025-10-08 11:57:35] 2025-10-08 15:56:52,099 | INFO     | adding to output.list: log.46373048._061016.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/38/87/log.46373048._061016.job.log.tg
[2025-10-08 11:57:35] 2025-10-08 15:56:52,100 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-08 11:57:35] 2025-10-08 15:56:52,100 | INFO     | summary of transferred files:
[2025-10-08 11:57:35] 2025-10-08 15:56:52,100 | INFO     |  -- lfn=log.46373048._061016.job.log.tgz.1, status_code=0, status=transferred
[2025-10-08 11:57:35] 2025-10-08 15:56:52,101 | INFO     | stage-out finished correctly
[2025-10-08 11:57:35] 2025-10-08 15:56:53,547 | INFO     | time since job start (4530s) is within the limit (172800.0s)
[2025-10-08 11:57:35] 2025-10-08 15:56:53,943 | INFO     | monitor loop #347: job 0:6826040249 is in state 'finished'
[2025-10-08 11:57:35] 2025-10-08 15:56:53,943 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 11:57:35] 2025-10-08 15:56:55,263 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-08 11:57:35] 2025-10-08 15:56:55,552 | INFO     | time since job start (4532s) is within the limit (172800.0s)
[2025-10-08 11:57:35] 2025-10-08 15:56:55,683 | INFO     | job 6826040249 has state=finished
[2025-10-08 11:57:35] 2025-10-08 15:56:55,683 | INFO     | preparing for final server update for job 6826040249 in state='finished'
[2025-10-08 11:57:35] 2025-10-08 15:56:55,757 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-08 11:57:35] 2025-10-08 15:56:55,758 | INFO     | this job has now completed (state=finished)
[2025-10-08 11:57:35] 2025-10-08 15:56:55,758 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-08 11:57:35] 2025-10-08 15:56:55,758 | INFO     | log transfer has been attempted: DONE
[2025-10-08 11:57:35] 2025-10-08 15:56:55,758 | INFO     | job 6826040249 has finished - writing final server update
[2025-10-08 11:57:35] 2025-10-08 15:56:55,759 | INFO     | total number of processed events: 400 (read)
[2025-10-08 11:57:35] 2025-10-08 15:56:55,759 | INFO     | executing command: lscpu
[2025-10-08 11:57:35] 2025-10-08 15:56:55,790 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-08 11:57:35] 2025-10-08 15:56:56,446 | INFO     | monitor loop #348: job 0:6826040249 is in state 'finished'
[2025-10-08 11:57:35] 2025-10-08 15:56:56,447 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 11:57:35] 2025-10-08 15:56:57,554 | INFO     | time since job start (4534s) is within the limit (172800.0s)
[2025-10-08 11:57:35] 2025-10-08 15:56:58,949 | INFO     | monitor loop #349: job 0:6826040249 is in state 'finished'
[2025-10-08 11:57:35] 2025-10-08 15:56:58,949 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 11:57:35] 2025-10-08 15:56:59,558 | INFO     | time since job start (4536s) is within the limit (172800.0s)
[2025-10-08 11:57:35] 2025-10-08 15:57:01,452 | INFO     | monitor loop #350: job 0:6826040249 is in state 'finished'
[2025-10-08 11:57:35] 2025-10-08 15:57:01,452 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 11:57:35] 2025-10-08 15:57:01,564 | INFO     | time since job start (4538s) is within the limit (172800.0s)
[2025-10-08 11:57:35] 2025-10-08 15:57:02,017 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-08 11:57:35] 2025-10-08 15:57:02,021 | INFO     | found 16 cores (8 cores per socket, 2 sockets) , CPU MHz: 1288.1098125
[2025-10-08 11:57:35] 2025-10-08 15:57:02,025 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6826040249/memory_monitor_summary.json (trf name=prmon)
[2025-10-08 11:57:35] 2025-10-08 15:57:02,026 | INFO     | extracted standard info from prmon json
[2025-10-08 11:57:35] 2025-10-08 15:57:02,026 | INFO     | extracted standard memory fields from prmon json
[2025-10-08 11:57:35] 2025-10-08 15:57:02,026 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-08 11:57:35] 2025-10-08 15:57:02,027 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-08 11:57:35] 2025-10-08 15:57:02,027 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-08 11:57:35] 2025-10-08 15:57:02,029 | INFO     | fitting pss+swap vs Time
[2025-10-08 11:57:35] 2025-10-08 15:57:02,029 | INFO     | sum of square deviations: 93240818.0
[2025-10-08 11:57:35] 2025-10-08 15:57:02,030 | INFO     | sum of deviations: -8227478456.000002
[2025-10-08 11:57:35] 2025-10-08 15:57:02,030 | INFO     | mean x: 1759936829.0
[2025-10-08 11:57:35] 2025-10-08 15:57:02,030 | INFO     | mean y: 2649512.029850746
[2025-10-08 11:57:35] 2025-10-08 15:57:02,030 | INFO     | -- intersect: 155297751540.3975
[2025-10-08 11:57:35] 2025-10-08 15:57:02,030 | INFO     | intersect: 155297751540.3975
[2025-10-08 11:57:35] 2025-10-08 15:57:02,030 | INFO     | chi2: 0.07772158777960382
[2025-10-08 11:57:35] 2025-10-08 15:57:02,031 | INFO     | -- intersect: 155297751540.3975
[2025-10-08 11:57:35] 2025-10-08 15:57:02,031 | INFO     | current memory leak: -88.24 B/s (using 67 data points, chi2=0.08)
[2025-10-08 11:57:35] 2025-10-08 15:57:02,031 | INFO     | could have reported an average CPU frequency of 1555 MHz (6 samples)
[2025-10-08 11:57:35] 2025-10-08 15:57:02,031 | INFO     | ..............................
[2025-10-08 11:57:35] 2025-10-08 15:57:02,032 | INFO     | . Timing measurements:
[2025-10-08 11:57:35] 2025-10-08 15:57:02,032 | INFO     | . get job = 0 s
[2025-10-08 11:57:35] 2025-10-08 15:57:02,032 | INFO     | . initial setup = 2 s
[2025-10-08 11:57:35] 2025-10-08 15:57:02,032 | INFO     | . payload setup = 6 s
[2025-10-08 11:57:35] 2025-10-08 15:57:02,032 | INFO     | . stage-in = 0 s
[2025-10-08 11:57:35] 2025-10-08 15:57:02,032 | INFO     | . payload execution = 4501 s
[2025-10-08 11:57:35] 2025-10-08 15:57:02,032 | INFO     | . stage-out = 0 s
[2025-10-08 11:57:35] 2025-10-08 15:57:02,032 | INFO     | . log creation = 0 s
[2025-10-08 11:57:35] 2025-10-08 15:57:02,032 | INFO     | ..............................
[2025-10-08 11:57:35] 2025-10-08 15:57:02,518 | INFO     | 
[2025-10-08 11:57:35] 2025-10-08 15:57:02,518 | INFO     | job summary report
[2025-10-08 11:57:35] 2025-10-08 15:57:02,518 | INFO     | --------------------------------------------------
[2025-10-08 11:57:35] 2025-10-08 15:57:02,518 | INFO     | PanDA job id: 6826040249
[2025-10-08 11:57:35] 2025-10-08 15:57:02,518 | INFO     | task id: 46373048
[2025-10-08 11:57:35] 2025-10-08 15:57:02,518 | INFO     | errors: (none)
[2025-10-08 11:57:35] 2025-10-08 15:57:02,519 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-08 11:57:35] 2025-10-08 15:57:02,519 | INFO     | pilot state: finished 
[2025-10-08 11:57:35] 2025-10-08 15:57:02,519 | INFO     | transexitcode: 0
[2025-10-08 11:57:35] 2025-10-08 15:57:02,519 | INFO     | exeerrorcode: 0
[2025-10-08 11:57:35] 2025-10-08 15:57:02,519 | INFO     | exeerrordiag: 
[2025-10-08 11:57:35] 2025-10-08 15:57:02,519 | INFO     | exitcode: 0
[2025-10-08 11:57:35] 2025-10-08 15:57:02,519 | INFO     | exitmsg: OK
[2025-10-08 11:57:35] 2025-10-08 15:57:02,519 | INFO     | cpuconsumptiontime: 33320 s
[2025-10-08 11:57:35] 2025-10-08 15:57:02,519 | INFO     | nevents: 400
[2025-10-08 11:57:35] 2025-10-08 15:57:02,520 | INFO     | neventsw: 0
[2025-10-08 11:57:35] 2025-10-08 15:57:02,520 | INFO     | pid: 23579
[2025-10-08 11:57:35] 2025-10-08 15:57:02,520 | INFO     | pgrp: 23579
[2025-10-08 11:57:35] 2025-10-08 15:57:02,520 | INFO     | corecount: 8
[2025-10-08 11:57:35] 2025-10-08 15:57:02,520 | INFO     | event service: False
[2025-10-08 11:57:35] 2025-10-08 15:57:02,520 | INFO     | sizes: {0: 2348670, 1: 2348869, 6: 2349131, 11: 2349159, 4511: 2375279, 4513: 2384277, 4516: 2384461, 4523: 2384655}
[2025-10-08 11:57:35] 2025-10-08 15:57:02,520 | INFO     | --------------------------------------------------
[2025-10-08 11:57:35] 2025-10-08 15:57:02,520 | INFO     | 
[2025-10-08 11:57:35] 2025-10-08 15:57:02,521 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-08 11:57:35] 2025-10-08 15:57:02,542 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-08 11:57:35] 2025-10-08 15:57:02,542 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-08 11:57:35] 2025-10-08 15:57:02,542 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-08 11:57:35] 2025-10-08 15:57:02,543 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-08 11:57:35] 2025-10-08 15:57:02,543 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-08 11:57:35] 2025-10-08 15:57:02,543 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-08 11:57:35] 2025-10-08 15:57:02,543 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-08 11:57:35] 2025-10-08 15:57:02,543 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-08 11:57:35] 2025-10-08 15:57:02,543 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-08 11:57:35] 2025-10-08 15:57:02,543 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-08 11:57:35] 2025-10-08 15:57:02,543 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-08 11:57:35] 2025-10-08 15:57:02,543 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-08 11:57:35] 2025-10-08 15:57:02,544 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-08 11:57:35] 2025-10-08 15:57:02,544 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-08 11:57:35] 2025-10-08 15:57:02,544 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-08 11:57:35] 2025-10-08 15:57:02,544 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-08 11:57:35] 2025-10-08 15:57:02,544 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-08 11:57:35] 2025-10-08 15:57:02,544 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-08 11:57:35] 2025-10-08 15:57:02,544 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-08 11:57:35] 2025-10-08 15:57:02,544 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-08 11:57:35] 2025-10-08 15:57:02,545 | INFO     | job 6826040249 has completed (purged errors)
[2025-10-08 11:57:35] 2025-10-08 15:57:02,545 | INFO     | overall cleanup function is called
[2025-10-08 11:57:35] 2025-10-08 15:57:03,553 | INFO     | --- collectZombieJob: --- 10, [23579]
[2025-10-08 11:57:35] 2025-10-08 15:57:03,553 | INFO     | zombie collector waiting for pid 23579
[2025-10-08 11:57:35] 2025-10-08 15:57:03,553 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-08 11:57:35] 2025-10-08 15:57:03,553 | INFO     | collected zombie processes
[2025-10-08 11:57:35] 2025-10-08 15:57:03,554 | INFO     | will attempt to kill all subprocesses of pid=23579
[2025-10-08 11:57:35] 2025-10-08 15:57:03,664 | INFO     | process IDs to be killed: [23579] (in reverse order)
[2025-10-08 11:57:35] 2025-10-08 15:57:03,719 | WARNING  | found no corresponding commands to process id(s)
[2025-10-08 11:57:35] 2025-10-08 15:57:03,719 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-08 11:57:35] 2025-10-08 15:57:03,723 | INFO     | did not find any defunct processes belonging to 23579
[2025-10-08 11:57:35] 2025-10-08 15:57:03,726 | INFO     | did not find any defunct processes belonging to 23579
[2025-10-08 11:57:35] 2025-10-08 15:57:03,727 | INFO     | ready for new job
[2025-10-08 11:57:35] 2025-10-08 15:57:03,727 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-08 11:57:35] 2025-10-08 15:57:03,729 | INFO     | ***************************************
[2025-10-08 11:57:35] 2025-10-08 15:57:03,729 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-08 11:57:35] 2025-10-08 15:57:03,729 | INFO     | ***************************************
[2025-10-08 11:57:35] 2025-10-08 15:57:03,729 | INFO     | 
[2025-10-08 11:57:35] 2025-10-08 15:57:03,730 | INFO     | architecture information:
[2025-10-08 11:57:35] 2025-10-08 15:57:03,731 | INFO     | executing command: cat /etc/os-release
[2025-10-08 11:57:35] 2025-10-08 15:57:03,744 | INFO     | cat /etc/os-release:
[2025-10-08 11:57:35] NAME="CentOS Linux"
[2025-10-08 11:57:35] VERSION="7 (Core)"
[2025-10-08 11:57:35] ID="centos"
[2025-10-08 11:57:35] ID_LIKE="rhel fedora"
[2025-10-08 11:57:35] VERSION_ID="7"
[2025-10-08 11:57:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-08 11:57:35] ANSI_COLOR="0;31"
[2025-10-08 11:57:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-08 11:57:35] HOME_URL="https://www.centos.org/"
[2025-10-08 11:57:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-08 11:57:35] 
[2025-10-08 11:57:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-08 11:57:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-08 11:57:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-08 11:57:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-08 11:57:35] 
[2025-10-08 11:57:35] 2025-10-08 15:57:03,744 | INFO     | ***************************************
[2025-10-08 11:57:35] 2025-10-08 15:57:04,247 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-08 11:57:35] 2025-10-08 15:57:04,262 | INFO     | sufficient remaining disk space (33263976448 B)
[2025-10-08 11:57:35] 2025-10-08 15:57:04,263 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-08 11:57:35] 2025-10-08 15:57:04,263 | INFO     | current server update state: UPDATING_FINAL
[2025-10-08 11:57:35] 2025-10-08 15:57:04,263 | INFO     | update_server=False
[2025-10-08 11:57:35] 2025-10-08 15:57:04,263 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-08 11:57:35] 2025-10-08 15:57:04,958 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-08 11:57:35] 2025-10-08 15:57:04,959 | INFO     | aborting loop
[2025-10-08 11:57:35] 2025-10-08 15:57:05,088 | INFO     | all data control threads have been joined
[2025-10-08 11:57:35] 2025-10-08 15:57:05,183 | INFO     | all payload control threads have been joined
[2025-10-08 11:57:35] 2025-10-08 15:57:05,193 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-08 11:57:35] 2025-10-08 15:57:05,268 | INFO     | [job] retrieve thread has finished
[2025-10-08 11:57:35] 2025-10-08 15:57:05,272 | INFO     | [payload] failed_post thread has finished
[2025-10-08 11:57:35] 2025-10-08 15:57:05,552 | INFO     | [payload] validate_pre thread has finished
[2025-10-08 11:57:35] 2025-10-08 15:57:05,645 | INFO     | [job] create_data_payload thread has finished
[2025-10-08 11:57:35] 2025-10-08 15:57:05,662 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-08 11:57:35] 2025-10-08 15:57:05,851 | INFO     | [payload] validate_post thread has finished
[2025-10-08 11:57:35] 2025-10-08 15:57:05,851 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-08 11:57:35] 2025-10-08 15:57:05,891 | INFO     | all job control threads have been joined
[2025-10-08 11:57:35] 2025-10-08 15:57:05,938 | INFO     | [data] copytool_in thread has finished
[2025-10-08 11:57:35] 2025-10-08 15:57:05,964 | INFO     | [job] job monitor thread has finished
[2025-10-08 11:57:35] 2025-10-08 15:57:06,093 | INFO     | [data] control thread has finished
[2025-10-08 11:57:35] 2025-10-08 15:57:06,189 | INFO     | [payload] control thread has finished
[2025-10-08 11:57:35] 2025-10-08 15:57:06,250 | INFO     | [payload] execute_payloads thread has finished
[2025-10-08 11:57:35] 2025-10-08 15:57:06,726 | INFO     | [job] validate thread has finished
[2025-10-08 11:57:35] 2025-10-08 15:57:06,896 | INFO     | [job] control thread has finished
[2025-10-08 11:57:35] 2025-10-08 15:57:07,127 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-08 11:57:35] 2025-10-08 15:57:07,196 | INFO     | [data] copytool_out thread has finished
[2025-10-08 11:57:35] 2025-10-08 15:57:08,133 | INFO     | [job] queue monitor thread has finished
[2025-10-08 11:57:35] 2025-10-08 15:57:09,857 | INFO     | [data] queue_monitor thread has finished
[2025-10-08 11:57:35] 2025-10-08 15:57:28,893 | INFO     | [monitor] cgroup control has ended
[2025-10-08 11:57:35] 2025-10-08 15:57:29,147 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139809883354944)>', '<ExcThread(monitor, started 139809163044608)>']
[2025-10-08 11:57:35] 2025-10-08 15:57:34,152 | INFO     | all workflow threads have been joined
[2025-10-08 11:57:35] 2025-10-08 15:57:34,152 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-08 11:57:35] 2025-10-08 15:57:34,153 | INFO     | traces error code: 0
[2025-10-08 11:57:35] 2025-10-08 15:57:34,153 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-08 11:57:35] 2025-10-08 15:57:34,756 | INFO     | PID=17220 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-08 11:57:35] 2025-10-08 15:57:34,756 | INFO     | found 0 job(s) in 20 queues
[2025-10-08 11:57:35] 2025-10-08 15:57:34,756 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-08 11:57:35] 2025-10-08 15:57:34,756 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-08 11:57:35] 2025-10-08 15:57:34,756 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-08 11:57:35] 2025-10-08 15:57:34,756 | INFO     | [monitor] control thread has ended
[2025-10-08 11:57:35] 2025-10-08 15:57:34,845 [wrapper] ==== pilot stdout END ====
[2025-10-08 11:57:35] 2025-10-08 15:57:34,849 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-08 11:57:35] 2025-10-08 15:57:34,853 [wrapper] pilotpid: 17220
[2025-10-08 11:57:35] 2025-10-08 15:57:34,856 [wrapper] Pilot exit status: 0
[2025-10-08 11:57:35] 2025-10-08 15:57:34,869 [wrapper] pandaids: 6826040249
[2025-10-08 11:57:35] 2025-10-08 15:57:34,912 [wrapper] cleanup supervisor_pilot 19606 17221
[2025-10-08 11:57:35] 2025-10-08 15:57:34,916 [wrapper] Test setup, not cleaning
[2025-10-08 11:57:35] 2025-10-08 15:57:34,920 [wrapper] apfmon messages muted
[2025-10-08 11:57:35] 2025-10-08 15:57:34,923 [wrapper] ==== wrapper stdout END ====
[2025-10-08 11:57:35] 2025-10-08 15:57:34,927 [wrapper] ==== wrapper stderr END ====
[2025-10-08 11:57:35]  *** Error codes and diagnostics ***
[2025-10-08 11:57:35]     "exeErrorCode": 0,
[2025-10-08 11:57:35]     "exeErrorDiag": "",
[2025-10-08 11:57:35]     "pilotErrorCode": 0,
[2025-10-08 11:57:35]     "pilotErrorDiag": "",
[2025-10-08 11:57:35]  *** Listing of results directory ***
[2025-10-08 11:57:35] total 419692
[2025-10-08 11:57:35] -rw-r--r-- 1 boincer umatlas    552446 Sep 30 09:19 pilot3.tar.gz
[2025-10-08 11:57:35] -rw-r--r-- 1 boincer umatlas      5112 Sep 30 09:38 queuedata.json
[2025-10-08 11:57:35] -rwx------ 1 boincer umatlas     36292 Sep 30 09:38 runpilot2-wrapper.sh
[2025-10-08 11:57:35] -rw-r--r-- 1 boincer umatlas       100 Oct  8 10:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-08 11:57:35] -rwxr-xr-x 1 boincer umatlas      7986 Oct  8 10:41 run_atlas
[2025-10-08 11:57:35] -rw-r--r-- 1 boincer umatlas       105 Oct  8 10:41 job.xml
[2025-10-08 11:57:35] -rw-r--r-- 2 boincer umatlas 224335259 Oct  8 10:41 EVNT.46373045._001929.pool.root.1
[2025-10-08 11:57:35] -rw-r--r-- 2 boincer umatlas     15120 Oct  8 10:41 start_atlas.sh
[2025-10-08 11:57:35] drwxrwx--x 2 boincer umatlas      4096 Oct  8 10:41 shared
[2025-10-08 11:57:35] -rw-r--r-- 2 boincer umatlas    565603 Oct  8 10:41 input.tar.gz
[2025-10-08 11:57:35] -rw-r--r-- 1 boincer umatlas         0 Oct  8 10:41 boinc_lockfile
[2025-10-08 11:57:35] -rw-r--r-- 1 boincer umatlas      2538 Oct  8 10:41 pandaJob.out
[2025-10-08 11:57:35] -rw------- 1 boincer umatlas    979287 Oct  8 10:41 agis_schedconf.cvmfs.json
[2025-10-08 11:57:35] -rw------- 1 boincer umatlas   1560401 Oct  8 10:41 agis_ddmendpoints.agis.ALL.json
[2025-10-08 11:57:35] drwx------ 4 boincer umatlas      4096 Oct  8 10:41 pilot3
[2025-10-08 11:57:35] -rw-r--r-- 1 boincer umatlas      6134 Oct  8 11:55 init_data.xml
[2025-10-08 11:57:35] -rw------- 1 boincer umatlas 199543427 Oct  8 11:56 HITS.46373048._061016.pool.root.1
[2025-10-08 11:57:35] -rw-r--r-- 1 boincer umatlas       529 Oct  8 11:56 boinc_task_state.xml
[2025-10-08 11:57:35] -rw------- 1 boincer umatlas      1039 Oct  8 11:56 memory_monitor_summary.json
[2025-10-08 11:57:35] -rw------- 1 boincer umatlas    337075 Oct  8 11:56 log.46373048._061016.job.log.tgz.1
[2025-10-08 11:57:35] -rw------- 1 boincer umatlas        95 Oct  8 11:57 pilot_heartbeat.json
[2025-10-08 11:57:35] -rw------- 1 boincer umatlas      7838 Oct  8 11:57 heartbeat.json
[2025-10-08 11:57:35] -rw-r--r-- 1 boincer umatlas      8192 Oct  8 11:57 boinc_mmap_file
[2025-10-08 11:57:35] -rw-r--r-- 1 boincer umatlas        27 Oct  8 11:57 wrapper_checkpoint.txt
[2025-10-08 11:57:35] -rw------- 1 boincer umatlas       745 Oct  8 11:57 pilotlog.txt
[2025-10-08 11:57:35] -rw------- 1 boincer umatlas    661367 Oct  8 11:57 log.46373048._061016.job.log.1
[2025-10-08 11:57:35] -rw------- 1 boincer umatlas       357 Oct  8 11:57 output.list
[2025-10-08 11:57:35] -rw-r--r-- 1 boincer umatlas       620 Oct  8 11:57 runtime_log
[2025-10-08 11:57:35] -rw------- 1 boincer umatlas   1013760 Oct  8 11:57 result.tar.gz
[2025-10-08 11:57:35] -rw-r--r-- 1 boincer umatlas      8703 Oct  8 11:57 runtime_log.err
[2025-10-08 11:57:35] -rw------- 1 boincer umatlas       656 Oct  8 11:57 R1cLDmDkpN8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmg77MDmeL4s6m.diag
[2025-10-08 11:57:35] -rw-r--r-- 1 boincer umatlas     22109 Oct  8 11:57 stderr.txt
[2025-10-08 11:57:35] HITS file was successfully produced:
[2025-10-08 11:57:35] -rw------- 1 boincer umatlas 199543427 Oct  8 11:56 shared/HITS.pool.root.1
[2025-10-08 11:57:35]  *** Contents of shared directory: ***
[2025-10-08 11:57:35] total 415520
[2025-10-08 11:57:35] -rw-r--r-- 2 boincer umatlas 224335259 Oct  8 10:41 ATLAS.root_0
[2025-10-08 11:57:35] -rw-r--r-- 2 boincer umatlas     15120 Oct  8 10:41 start_atlas.sh
[2025-10-08 11:57:35] -rw-r--r-- 2 boincer umatlas    565603 Oct  8 10:41 input.tar.gz
[2025-10-08 11:57:35] -rw------- 1 boincer umatlas 199543427 Oct  8 11:56 HITS.pool.root.1
[2025-10-08 11:57:35] -rw------- 1 boincer umatlas   1013760 Oct  8 11:57 result.tar.gz
11:57:36 (13545): run_atlas exited; CPU time 33307.764838
11:57:36 (13545): called boinc_finish(0)

</stderr_txt>
]]>

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