Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
08:56:17 (2831057): wrapper (7.7.26015): starting
08:56:17 (2831057): wrapper: running run_atlas (--nthreads 8)
[2025-10-08 08:56:17] Arguments: --nthreads 8
[2025-10-08 08:56:17] Threads: 8
[2025-10-08 08:56:17] Checking for CVMFS
[2025-10-08 08:56:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 08:56:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 08:56:17] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 08:56:18] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 08:56:18] 2.13.2.0 1187368 118102 365224 151472 0 845 21115330 40960000 21675 16776704 0 317559622 99.666 283762405 34009 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-08 08:56:18] CVMFS is ok
[2025-10-08 08:56:18] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-08 08:56:18] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-08 08:56:18] Further information can be found at the LHC@home message board.
[2025-10-08 08:56:18] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 08:56:18] Checking for apptainer binary...
[2025-10-08 08:56:18] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 08:56:18] Running /usr/bin/apptainer --version
[2025-10-08 08:56:18] apptainer version 1.4.3-1.el9
[2025-10-08 08:56:18] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 08:56:18] c-212-19.aglt2.org
[2025-10-08 08:56:18] apptainer works
[2025-10-08 08:56:18] Set ATHENA_PROC_NUMBER=8
[2025-10-08 08:56:18] Set ATHENA_CORE_NUMBER=8
[2025-10-08 08:56:18] Starting ATLAS job with PandaID=6835977584
[2025-10-08 08:56:18] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-08 10:37:03]  *** The last 200 lines of the pilot log: ***
[2025-10-08 10:37:03]  mtime=0
[2025-10-08 10:37:03]  protocol_id=None
[2025-10-08 10:37:03]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-08 10:37:03]  replicas=None
[2025-10-08 10:37:03]  scope=mc23_13p6TeV
[2025-10-08 10:37:03]  status=None
[2025-10-08 10:37:03]  status_code=0
[2025-10-08 10:37:03]  storage_token=
[2025-10-08 10:37:03]  surl=/tmp/boinchome/slots/2/PanDA_Pilot-6835977584/log.46676269._003778.job.log.tgz.1
[2025-10-08 10:37:03]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b1/f1/log.46676269._003778.job.log.tgz.1
[2025-10-08 10:37:03]  workdir=None
[2025-10-08 10:37:03] ]
[2025-10-08 10:37:03] 2025-10-08 14:36:20,151 | INFO     | transferring file log.46676269._003778.job.log.tgz.1 from /tmp/boinchome/slots/2/PanDA_Pilot-6835977584/log.46676269._003778.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-08 10:37:03] 2025-10-08 14:36:20,152 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/2/PanDA_Pilot-6835977584/log.46676269._003778.job.log.tgz.1 /tmp/boinchome/slots/2/log.46676269._003778.job
[2025-10-08 10:37:03] 2025-10-08 14:36:20,175 | INFO     | adding to output.list: log.46676269._003778.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b1/f1/log.46676269._003778.job.log.tg
[2025-10-08 10:37:03] 2025-10-08 14:36:20,176 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-08 10:37:03] 2025-10-08 14:36:20,176 | INFO     | summary of transferred files:
[2025-10-08 10:37:03] 2025-10-08 14:36:20,176 | INFO     |  -- lfn=log.46676269._003778.job.log.tgz.1, status_code=0, status=transferred
[2025-10-08 10:37:03] 2025-10-08 14:36:20,177 | INFO     | stage-out finished correctly
[2025-10-08 10:37:03] 2025-10-08 14:36:20,255 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-08 10:37:03] 2025-10-08 14:36:21,629 | INFO     | time since job start (5975s) is within the limit (172800.0s)
[2025-10-08 10:37:03] 2025-10-08 14:36:21,970 | INFO     | monitor loop #420: job 0:6835977584 is in state 'finished'
[2025-10-08 10:37:03] 2025-10-08 14:36:21,970 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 10:37:03] 2025-10-08 14:36:22,921 | INFO     | job 6835977584 has state=finished
[2025-10-08 10:37:03] 2025-10-08 14:36:22,922 | INFO     | preparing for final server update for job 6835977584 in state='finished'
[2025-10-08 10:37:03] 2025-10-08 14:36:22,922 | INFO     | this job has now completed (state=finished)
[2025-10-08 10:37:03] 2025-10-08 14:36:22,922 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-08 10:37:03] 2025-10-08 14:36:22,923 | INFO     | log transfer has been attempted: DONE
[2025-10-08 10:37:03] 2025-10-08 14:36:22,923 | INFO     | job 6835977584 has finished - writing final server update
[2025-10-08 10:37:03] 2025-10-08 14:36:22,923 | INFO     | total number of processed events: 400 (read)
[2025-10-08 10:37:03] 2025-10-08 14:36:22,924 | INFO     | executing command: lscpu
[2025-10-08 10:37:03] 2025-10-08 14:36:23,001 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-08 10:37:03] 2025-10-08 14:36:23,646 | INFO     | time since job start (5977s) is within the limit (172800.0s)
[2025-10-08 10:37:03] 2025-10-08 14:36:24,473 | INFO     | monitor loop #421: job 0:6835977584 is in state 'finished'
[2025-10-08 10:37:03] 2025-10-08 14:36:24,473 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 10:37:03] 2025-10-08 14:36:25,654 | INFO     | time since job start (5979s) is within the limit (172800.0s)
[2025-10-08 10:37:03] 2025-10-08 14:36:26,738 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-08 10:37:03] 2025-10-08 14:36:26,749 | INFO     | found 48 cores (24 cores per socket, 2 sockets) HT, CPU MHz: 3100.759593750001
[2025-10-08 10:37:03] 2025-10-08 14:36:26,766 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6835977584/memory_monitor_summary.json (trf name=prmon)
[2025-10-08 10:37:03] 2025-10-08 14:36:26,767 | INFO     | extracted standard info from prmon json
[2025-10-08 10:37:03] 2025-10-08 14:36:26,767 | INFO     | extracted standard memory fields from prmon json
[2025-10-08 10:37:03] 2025-10-08 14:36:26,767 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-08 10:37:03] 2025-10-08 14:36:26,767 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-08 10:37:03] 2025-10-08 14:36:26,767 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-08 10:37:03] 2025-10-08 14:36:26,769 | INFO     | fitting pss+swap vs Time
[2025-10-08 10:37:03] 2025-10-08 14:36:26,770 | INFO     | sum of square deviations: 226022538.4888887
[2025-10-08 10:37:03] 2025-10-08 14:36:26,770 | INFO     | sum of deviations: -1955217239.9555564
[2025-10-08 10:37:03] 2025-10-08 14:36:26,770 | INFO     | mean x: 1759931287.511111
[2025-10-08 10:37:03] 2025-10-08 14:36:26,770 | INFO     | mean y: 2539277.4555555554
[2025-10-08 10:37:03] 2025-10-08 14:36:26,770 | INFO     | -- intersect: 15226897067.101679
[2025-10-08 10:37:03] 2025-10-08 14:36:26,770 | INFO     | intersect: 15226897067.101679
[2025-10-08 10:37:03] 2025-10-08 14:36:26,771 | INFO     | chi2: 0.04518519360625523
[2025-10-08 10:37:03] 2025-10-08 14:36:26,771 | INFO     | -- intersect: 15226897067.101679
[2025-10-08 10:37:03] 2025-10-08 14:36:26,771 | INFO     | current memory leak: -8.65 B/s (using 90 data points, chi2=0.05)
[2025-10-08 10:37:03] 2025-10-08 14:36:26,771 | INFO     | could have reported an average CPU frequency of 3150 MHz (7 samples)
[2025-10-08 10:37:03] 2025-10-08 14:36:26,771 | INFO     | ..............................
[2025-10-08 10:37:03] 2025-10-08 14:36:26,771 | INFO     | . Timing measurements:
[2025-10-08 10:37:03] 2025-10-08 14:36:26,772 | INFO     | . get job = 0 s
[2025-10-08 10:37:03] 2025-10-08 14:36:26,772 | INFO     | . initial setup = 3 s
[2025-10-08 10:37:03] 2025-10-08 14:36:26,772 | INFO     | . payload setup = 15 s
[2025-10-08 10:37:03] 2025-10-08 14:36:26,772 | INFO     | . stage-in = 0 s
[2025-10-08 10:37:03] 2025-10-08 14:36:26,772 | INFO     | . payload execution = 5921 s
[2025-10-08 10:37:03] 2025-10-08 14:36:26,772 | INFO     | . stage-out = 0 s
[2025-10-08 10:37:03] 2025-10-08 14:36:26,772 | INFO     | . log creation = 0 s
[2025-10-08 10:37:03] 2025-10-08 14:36:26,772 | INFO     | ..............................
[2025-10-08 10:37:03] 2025-10-08 14:36:26,858 | INFO     | 
[2025-10-08 10:37:03] 2025-10-08 14:36:26,858 | INFO     | job summary report
[2025-10-08 10:37:03] 2025-10-08 14:36:26,859 | INFO     | --------------------------------------------------
[2025-10-08 10:37:03] 2025-10-08 14:36:26,859 | INFO     | PanDA job id: 6835977584
[2025-10-08 10:37:03] 2025-10-08 14:36:26,859 | INFO     | task id: 46676269
[2025-10-08 10:37:03] 2025-10-08 14:36:26,859 | INFO     | errors: (none)
[2025-10-08 10:37:03] 2025-10-08 14:36:26,859 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-08 10:37:03] 2025-10-08 14:36:26,859 | INFO     | pilot state: finished 
[2025-10-08 10:37:03] 2025-10-08 14:36:26,859 | INFO     | transexitcode: 0
[2025-10-08 10:37:03] 2025-10-08 14:36:26,859 | INFO     | exeerrorcode: 0
[2025-10-08 10:37:03] 2025-10-08 14:36:26,859 | INFO     | exeerrordiag: 
[2025-10-08 10:37:03] 2025-10-08 14:36:26,859 | INFO     | exitcode: 0
[2025-10-08 10:37:03] 2025-10-08 14:36:26,859 | INFO     | exitmsg: OK
[2025-10-08 10:37:03] 2025-10-08 14:36:26,859 | INFO     | cpuconsumptiontime: 33928 s
[2025-10-08 10:37:03] 2025-10-08 14:36:26,859 | INFO     | nevents: 400
[2025-10-08 10:37:03] 2025-10-08 14:36:26,859 | INFO     | neventsw: 0
[2025-10-08 10:37:03] 2025-10-08 14:36:26,859 | INFO     | pid: 2846791
[2025-10-08 10:37:03] 2025-10-08 14:36:26,859 | INFO     | pgrp: 2846791
[2025-10-08 10:37:03] 2025-10-08 14:36:26,859 | INFO     | corecount: 8
[2025-10-08 10:37:03] 2025-10-08 14:36:26,859 | INFO     | event service: False
[2025-10-08 10:37:03] 2025-10-08 14:36:26,860 | INFO     | sizes: {0: 2348681, 1: 2348880, 11: 2348880, 13: 2349170, 22: 2349226, 5940: 2376059, 5941: 2385113, 5948: 2385251}
[2025-10-08 10:37:03] 2025-10-08 14:36:26,860 | INFO     | --------------------------------------------------
[2025-10-08 10:37:03] 2025-10-08 14:36:26,860 | INFO     | 
[2025-10-08 10:37:03] 2025-10-08 14:36:26,860 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-08 10:37:03] 2025-10-08 14:36:26,878 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-08 10:37:03] 2025-10-08 14:36:26,879 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-08 10:37:03] 2025-10-08 14:36:26,879 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-08 10:37:03] 2025-10-08 14:36:26,879 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-08 10:37:03] 2025-10-08 14:36:26,879 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-08 10:37:03] 2025-10-08 14:36:26,879 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-08 10:37:03] 2025-10-08 14:36:26,879 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-08 10:37:03] 2025-10-08 14:36:26,879 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-08 10:37:03] 2025-10-08 14:36:26,879 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-08 10:37:03] 2025-10-08 14:36:26,879 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-08 10:37:03] 2025-10-08 14:36:26,879 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-08 10:37:03] 2025-10-08 14:36:26,879 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-08 10:37:03] 2025-10-08 14:36:26,879 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-08 10:37:03] 2025-10-08 14:36:26,879 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-08 10:37:03] 2025-10-08 14:36:26,879 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-08 10:37:03] 2025-10-08 14:36:26,880 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-08 10:37:03] 2025-10-08 14:36:26,880 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-08 10:37:03] 2025-10-08 14:36:26,880 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-08 10:37:03] 2025-10-08 14:36:26,880 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-08 10:37:03] 2025-10-08 14:36:26,880 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-08 10:37:03] 2025-10-08 14:36:26,880 | INFO     | job 6835977584 has completed (purged errors)
[2025-10-08 10:37:03] 2025-10-08 14:36:26,880 | INFO     | overall cleanup function is called
[2025-10-08 10:37:03] 2025-10-08 14:36:27,889 | INFO     | --- collectZombieJob: --- 10, [2846791]
[2025-10-08 10:37:03] 2025-10-08 14:36:27,889 | INFO     | zombie collector waiting for pid 2846791
[2025-10-08 10:37:03] 2025-10-08 14:36:27,889 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-08 10:37:03] 2025-10-08 14:36:27,889 | INFO     | collected zombie processes
[2025-10-08 10:37:03] 2025-10-08 14:36:27,889 | INFO     | will attempt to kill all subprocesses of pid=2846791
[2025-10-08 10:37:03] 2025-10-08 14:36:28,203 | INFO     | process IDs to be killed: [2846791] (in reverse order)
[2025-10-08 10:37:03] 2025-10-08 14:36:28,323 | WARNING  | found no corresponding commands to process id(s)
[2025-10-08 10:37:03] 2025-10-08 14:36:28,323 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-08 10:37:03] 2025-10-08 14:36:28,335 | INFO     | did not find any defunct processes belonging to 2846791
[2025-10-08 10:37:03] 2025-10-08 14:36:28,351 | INFO     | did not find any defunct processes belonging to 2846791
[2025-10-08 10:37:03] 2025-10-08 14:36:28,351 | INFO     | ready for new job
[2025-10-08 10:37:03] 2025-10-08 14:36:28,352 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-08 10:37:03] 2025-10-08 14:36:28,354 | INFO     | ***************************************
[2025-10-08 10:37:03] 2025-10-08 14:36:28,354 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-08 10:37:03] 2025-10-08 14:36:28,354 | INFO     | ***************************************
[2025-10-08 10:37:03] 2025-10-08 14:36:28,354 | INFO     | 
[2025-10-08 10:37:03] 2025-10-08 14:36:28,359 | INFO     | architecture information:
[2025-10-08 10:37:03] 2025-10-08 14:36:28,360 | INFO     | executing command: cat /etc/os-release
[2025-10-08 10:37:03] 2025-10-08 14:36:28,385 | INFO     | cat /etc/os-release:
[2025-10-08 10:37:03] NAME="CentOS Linux"
[2025-10-08 10:37:03] VERSION="7 (Core)"
[2025-10-08 10:37:03] ID="centos"
[2025-10-08 10:37:03] ID_LIKE="rhel fedora"
[2025-10-08 10:37:03] VERSION_ID="7"
[2025-10-08 10:37:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-08 10:37:03] ANSI_COLOR="0;31"
[2025-10-08 10:37:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-08 10:37:03] HOME_URL="https://www.centos.org/"
[2025-10-08 10:37:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-08 10:37:03] 
[2025-10-08 10:37:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-08 10:37:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-08 10:37:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-08 10:37:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-08 10:37:03] 
[2025-10-08 10:37:03] 2025-10-08 14:36:28,386 | INFO     | ***************************************
[2025-10-08 10:37:03] 2025-10-08 14:36:28,888 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-08 10:37:03] 2025-10-08 14:36:28,911 | INFO     | sufficient remaining disk space (129828388864 B)
[2025-10-08 10:37:03] 2025-10-08 14:36:28,912 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-08 10:37:03] 2025-10-08 14:36:28,912 | INFO     | current server update state: UPDATING_FINAL
[2025-10-08 10:37:03] 2025-10-08 14:36:28,912 | INFO     | update_server=False
[2025-10-08 10:37:03] 2025-10-08 14:36:28,912 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-08 10:37:03] 2025-10-08 14:36:28,912 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-08 10:37:03] 2025-10-08 14:36:28,913 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-08 10:37:03] 2025-10-08 14:36:28,913 | INFO     | aborting loop
[2025-10-08 10:37:03] 2025-10-08 14:36:29,138 | INFO     | all data control threads have been joined
[2025-10-08 10:37:03] 2025-10-08 14:36:29,917 | INFO     | [job] retrieve thread has finished
[2025-10-08 10:37:03] 2025-10-08 14:36:29,918 | INFO     | [job] job monitor thread has finished
[2025-10-08 10:37:03] 2025-10-08 14:36:29,973 | INFO     | [payload] validate_pre thread has finished
[2025-10-08 10:37:03] 2025-10-08 14:36:30,042 | INFO     | [payload] validate_post thread has finished
[2025-10-08 10:37:03] 2025-10-08 14:36:30,063 | INFO     | all payload control threads have been joined
[2025-10-08 10:37:03] 2025-10-08 14:36:30,143 | INFO     | [data] control thread has finished
[2025-10-08 10:37:03] 2025-10-08 14:36:30,194 | INFO     | [job] validate thread has finished
[2025-10-08 10:37:03] 2025-10-08 14:36:30,455 | INFO     | all job control threads have been joined
[2025-10-08 10:37:03] 2025-10-08 14:36:30,827 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-08 10:37:03] 2025-10-08 14:36:30,880 | INFO     | [data] copytool_in thread has finished
[2025-10-08 10:37:03] 2025-10-08 14:36:30,890 | INFO     | [payload] execute_payloads thread has finished
[2025-10-08 10:37:03] 2025-10-08 14:36:30,918 | INFO     | [data] copytool_out thread has finished
[2025-10-08 10:37:03] 2025-10-08 14:36:31,069 | INFO     | [payload] control thread has finished
[2025-10-08 10:37:03] 2025-10-08 14:36:31,156 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-08 10:37:03] 2025-10-08 14:36:31,160 | INFO     | [job] create_data_payload thread has finished
[2025-10-08 10:37:03] 2025-10-08 14:36:31,345 | INFO     | [payload] failed_post thread has finished
[2025-10-08 10:37:03] 2025-10-08 14:36:31,463 | INFO     | [job] control thread has finished
[2025-10-08 10:37:03] 2025-10-08 14:36:31,870 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-08 10:37:03] 2025-10-08 14:36:32,875 | INFO     | [job] queue monitor thread has finished
[2025-10-08 10:37:03] 2025-10-08 14:36:34,833 | INFO     | [data] queue_monitor thread has finished
[2025-10-08 10:37:03] 2025-10-08 14:36:56,370 | INFO     | [monitor] cgroup control has ended
[2025-10-08 10:37:03] 2025-10-08 14:36:58,253 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140395439617856)>', '<ExcThread(monitor, started 140394427840256)>']
[2025-10-08 10:37:03] 2025-10-08 14:36:59,166 | INFO     | PID=2838092 has CPU usage=6.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-08 10:37:03] 2025-10-08 14:36:59,166 | INFO     | .. there are 20 such processes running
[2025-10-08 10:37:03] 2025-10-08 14:36:59,168 | INFO     | found 0 job(s) in 20 queues
[2025-10-08 10:37:03] 2025-10-08 14:36:59,168 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-08 10:37:03] 2025-10-08 14:36:59,168 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-08 10:37:03] 2025-10-08 14:36:59,168 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-08 10:37:03] 2025-10-08 14:36:59,168 | INFO     | [monitor] control thread has ended
[2025-10-08 10:37:03] 2025-10-08 14:37:03,278 | INFO     | all workflow threads have been joined
[2025-10-08 10:37:03] 2025-10-08 14:37:03,278 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-08 10:37:03] 2025-10-08 14:37:03,279 | INFO     | traces error code: 0
[2025-10-08 10:37:03] 2025-10-08 14:37:03,279 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-08 10:37:03] 2025-10-08 14:37:03,477 [wrapper] ==== pilot stdout END ====
[2025-10-08 10:37:03] 2025-10-08 14:37:03,480 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-08 10:37:03] 2025-10-08 14:37:03,483 [wrapper] pilotpid: 2838092
[2025-10-08 10:37:03] 2025-10-08 14:37:03,486 [wrapper] Pilot exit status: 0
[2025-10-08 10:37:03] 2025-10-08 14:37:03,496 [wrapper] pandaids: 6835977584
[2025-10-08 10:37:03] 2025-10-08 14:37:03,579 [wrapper] cleanup supervisor_pilot 3111859 2838093
[2025-10-08 10:37:03] 2025-10-08 14:37:03,582 [wrapper] Test setup, not cleaning
[2025-10-08 10:37:03] 2025-10-08 14:37:03,584 [wrapper] apfmon messages muted
[2025-10-08 10:37:03] 2025-10-08 14:37:03,586 [wrapper] ==== wrapper stdout END ====
[2025-10-08 10:37:03] 2025-10-08 14:37:03,589 [wrapper] ==== wrapper stderr END ====
[2025-10-08 10:37:03]  *** Error codes and diagnostics ***
[2025-10-08 10:37:03]     "exeErrorCode": 0,
[2025-10-08 10:37:03]     "exeErrorDiag": "",
[2025-10-08 10:37:03]     "pilotErrorCode": 0,
[2025-10-08 10:37:03]     "pilotErrorDiag": "",
[2025-10-08 10:37:03]  *** Listing of results directory ***
[2025-10-08 10:37:03] total 413080
[2025-10-08 10:37:03] -rw-r--r--. 1 boincer umatlas    557409 Oct  8 05:48 pilot3.tar.gz
[2025-10-08 10:37:03] -rw-r--r--. 1 boincer umatlas      5112 Oct  8 05:53 queuedata.json
[2025-10-08 10:37:03] -rwx------. 1 boincer umatlas     36292 Oct  8 05:53 runpilot2-wrapper.sh
[2025-10-08 10:37:03] -rw-r--r--. 1 boincer umatlas       100 Oct  8 08:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-08 10:37:03] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  8 08:56 run_atlas
[2025-10-08 10:37:03] -rw-r--r--. 1 boincer umatlas       105 Oct  8 08:56 job.xml
[2025-10-08 10:37:03] -rw-r--r--. 2 boincer umatlas 220495011 Oct  8 08:56 EVNT.46676267._000151.pool.root.1
[2025-10-08 10:37:03] -rw-r--r--. 2 boincer umatlas     15120 Oct  8 08:56 start_atlas.sh
[2025-10-08 10:37:03] drwxrwx--x. 2 boincer umatlas      4096 Oct  8 08:56 shared
[2025-10-08 10:37:03] -rw-r--r--. 2 boincer umatlas    569681 Oct  8 08:56 input.tar.gz
[2025-10-08 10:37:03] -rw-r--r--. 1 boincer umatlas         0 Oct  8 08:56 boinc_lockfile
[2025-10-08 10:37:03] -rw-r--r--. 1 boincer umatlas      2548 Oct  8 08:56 pandaJob.out
[2025-10-08 10:37:03] -rw-------. 1 boincer umatlas    979337 Oct  8 08:56 agis_schedconf.cvmfs.json
[2025-10-08 10:37:03] -rw-------. 1 boincer umatlas   1560401 Oct  8 08:56 agis_ddmendpoints.agis.ALL.json
[2025-10-08 10:37:03] drwx------. 5 boincer umatlas      4096 Oct  8 08:56 pilot3
[2025-10-08 10:37:03] -rw-r--r--. 1 boincer umatlas      6946 Oct  8 10:27 init_data.xml
[2025-10-08 10:37:03] -rw-------. 1 boincer umatlas 196192137 Oct  8 10:35 HITS.46676269._003778.pool.root.1
[2025-10-08 10:37:03] -rw-r--r--. 1 boincer umatlas       529 Oct  8 10:35 boinc_task_state.xml
[2025-10-08 10:37:03] -rw-------. 1 boincer umatlas      1036 Oct  8 10:36 memory_monitor_summary.json
[2025-10-08 10:37:03] -rw-------. 1 boincer umatlas    359132 Oct  8 10:36 log.46676269._003778.job.log.tgz.1
[2025-10-08 10:37:03] -rw-------. 1 boincer umatlas      7774 Oct  8 10:36 heartbeat.json
[2025-10-08 10:37:03] -rw-------. 1 boincer umatlas        95 Oct  8 10:36 pilot_heartbeat.json
[2025-10-08 10:37:03] -rw-r--r--. 1 boincer umatlas        27 Oct  8 10:36 wrapper_checkpoint.txt
[2025-10-08 10:37:03] -rw-r--r--. 1 boincer umatlas      8192 Oct  8 10:36 boinc_mmap_file
[2025-10-08 10:37:03] -rw-------. 1 boincer umatlas      4825 Oct  8 10:37 pilotlog.txt
[2025-10-08 10:37:03] -rw-------. 1 boincer umatlas    840129 Oct  8 10:37 log.46676269._003778.job.log.1
[2025-10-08 10:37:03] -rw-------. 1 boincer umatlas       357 Oct  8 10:37 output.list
[2025-10-08 10:37:03] -rw-r--r--. 1 boincer umatlas       620 Oct  8 10:37 runtime_log
[2025-10-08 10:37:03] -rw-------. 1 boincer umatlas   1218560 Oct  8 10:37 result.tar.gz
[2025-10-08 10:37:03] -rw-r--r--. 1 boincer umatlas      8703 Oct  8 10:37 runtime_log.err
[2025-10-08 10:37:03] -rw-------. 1 boincer umatlas       652 Oct  8 10:37 axaNDmi2fQ8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmunXNDmWZBWnn.diag
[2025-10-08 10:37:03] -rw-r--r--. 1 boincer umatlas     21730 Oct  8 10:37 stderr.txt
[2025-10-08 10:37:03] HITS file was successfully produced:
[2025-10-08 10:37:03] -rw-------. 1 boincer umatlas 196192137 Oct  8 10:35 shared/HITS.pool.root.1
[2025-10-08 10:37:03]  *** Contents of shared directory: ***
[2025-10-08 10:37:03] total 408700
[2025-10-08 10:37:03] -rw-r--r--. 2 boincer umatlas 220495011 Oct  8 08:56 ATLAS.root_0
[2025-10-08 10:37:03] -rw-r--r--. 2 boincer umatlas     15120 Oct  8 08:56 start_atlas.sh
[2025-10-08 10:37:03] -rw-r--r--. 2 boincer umatlas    569681 Oct  8 08:56 input.tar.gz
[2025-10-08 10:37:03] -rw-------. 1 boincer umatlas 196192137 Oct  8 10:35 HITS.pool.root.1
[2025-10-08 10:37:03] -rw-------. 1 boincer umatlas   1218560 Oct  8 10:37 result.tar.gz
10:37:05 (2831057): run_atlas exited; CPU time 34027.284666
10:37:05 (2831057): called boinc_finish(0)

</stderr_txt>
]]>

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