Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
17:26:23 (2381784): wrapper (7.7.26015): starting
17:26:23 (2381784): wrapper: running run_atlas (--nthreads 3)
[2025-10-08 17:26:23] Arguments: --nthreads 3
[2025-10-08 17:26:23] Threads: 3
[2025-10-08 17:26:23] Checking for CVMFS
[2025-10-08 17:26:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 17:26:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 17:26:23] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 17:26:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 17:26:24] 2.9.2.0 2304204 264 56512 151477 0 56 25923380 36864001 0 130560 0 202397 99.984 13410 1334 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-08 17:26:24] CVMFS is ok
[2025-10-08 17:26:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-08 17:26:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-08 17:26:24] Further information can be found at the LHC@home message board.
[2025-10-08 17:26:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 17:26:24] Checking for apptainer binary...
[2025-10-08 17:26:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 17:26:24] Running /usr/bin/apptainer --version
[2025-10-08 17:26:24] apptainer version 1.4.1-1.1
[2025-10-08 17:26:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 17:26:24] cosA125a
[2025-10-08 17:26:24] apptainer works
[2025-10-08 17:26:24] Set ATHENA_PROC_NUMBER=3
[2025-10-08 17:26:24] Set ATHENA_CORE_NUMBER=3
[2025-10-08 17:26:24] Starting ATLAS job with PandaID=6835975030
[2025-10-08 17:26:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-08 18:47:40]  *** The last 200 lines of the pilot log: ***
[2025-10-08 18:47:40]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/87/ef/log.46676269._002669.job.log.tgz.1
[2025-10-08 18:47:40]  workdir=None
[2025-10-08 18:47:40] ]
[2025-10-08 18:47:40] 2025-10-08 16:46:41,325 | INFO     | transferring file log.46676269._002669.job.log.tgz.1 from /local/data/boinc/slots/0/PanDA_Pilot-6835975030/log.46676269._002669.job.log.tgz.1 to /local/data/boinc/
[2025-10-08 18:47:40] 2025-10-08 16:46:41,326 | INFO     | executing command: /usr/bin/env mv /local/data/boinc/slots/0/PanDA_Pilot-6835975030/log.46676269._002669.job.log.tgz.1 /local/data/boinc/slots/0/log.46676269._0026
[2025-10-08 18:47:40] 2025-10-08 16:46:41,337 | INFO     | adding to output.list: log.46676269._002669.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/87/ef/log.46676269._002669.job.log.tg
[2025-10-08 18:47:40] 2025-10-08 16:46:41,338 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-08 18:47:40] 2025-10-08 16:46:41,338 | INFO     | summary of transferred files:
[2025-10-08 18:47:40] 2025-10-08 16:46:41,338 | INFO     |  -- lfn=log.46676269._002669.job.log.tgz.1, status_code=0, status=transferred
[2025-10-08 18:47:40] 2025-10-08 16:46:41,338 | INFO     | stage-out finished correctly
[2025-10-08 18:47:40] 2025-10-08 16:46:41,368 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-08 18:47:40] 2025-10-08 16:46:41,648 | INFO     | time since job start (4812s) is within the limit (172800.0s)
[2025-10-08 18:47:40] 2025-10-08 16:46:42,277 | INFO     | job 6835975030 has state=finished
[2025-10-08 18:47:40] 2025-10-08 16:46:42,277 | INFO     | preparing for final server update for job 6835975030 in state='finished'
[2025-10-08 18:47:40] 2025-10-08 16:46:42,277 | INFO     | this job has now completed (state=finished)
[2025-10-08 18:47:40] 2025-10-08 16:46:42,277 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-08 18:47:40] 2025-10-08 16:46:42,277 | INFO     | log transfer has been attempted: DONE
[2025-10-08 18:47:40] 2025-10-08 16:46:42,278 | INFO     | job 6835975030 has finished - writing final server update
[2025-10-08 18:47:40] 2025-10-08 16:46:42,278 | INFO     | total number of processed events: 400 (read)
[2025-10-08 18:47:40] 2025-10-08 16:46:42,278 | INFO     | executing command: lscpu
[2025-10-08 18:47:40] 2025-10-08 16:46:42,291 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-08 18:47:40] 2025-10-08 16:46:42,317 | WARNING  | process 2391936 can no longer be monitored (due to stat problems) - aborting
[2025-10-08 18:47:40] 2025-10-08 16:46:42,317 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6835975030/memory_monitor_summary.json (trf name=prmon)
[2025-10-08 18:47:40] 2025-10-08 16:46:42,365 | INFO     | number of running child processes to parent process 2391936: 1
[2025-10-08 18:47:40] 2025-10-08 16:46:42,365 | INFO     | maximum number of monitored processes: 6
[2025-10-08 18:47:40] 2025-10-08 16:46:43,653 | INFO     | time since job start (4814s) is within the limit (172800.0s)
[2025-10-08 18:47:40] 2025-10-08 16:46:44,868 | INFO     | monitor loop #370: job 0:6835975030 is in state 'finished'
[2025-10-08 18:47:40] 2025-10-08 16:46:44,868 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 18:47:40] 2025-10-08 16:46:45,659 | INFO     | time since job start (4816s) is within the limit (172800.0s)
[2025-10-08 18:47:40] 2025-10-08 16:46:47,372 | INFO     | monitor loop #371: job 0:6835975030 is in state 'finished'
[2025-10-08 18:47:40] 2025-10-08 16:46:47,372 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 18:47:40] 2025-10-08 16:46:47,664 | INFO     | time since job start (4818s) is within the limit (172800.0s)
[2025-10-08 18:47:40] 2025-10-08 16:46:48,719 | INFO     | PID=2385509 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-08 18:47:40] 2025-10-08 16:46:49,720 | INFO     | time since job start (4820s) is within the limit (172800.0s)
[2025-10-08 18:47:40] 2025-10-08 16:46:49,875 | INFO     | monitor loop #372: job 0:6835975030 is in state 'finished'
[2025-10-08 18:47:40] 2025-10-08 16:46:49,876 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 18:47:40] 2025-10-08 16:46:50,795 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-08 18:47:40] 2025-10-08 16:46:50,796 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3856.997666666666
[2025-10-08 18:47:40] 2025-10-08 16:46:50,796 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6835975030/memory_monitor_summary.json (trf name=prmon)
[2025-10-08 18:47:40] 2025-10-08 16:46:50,797 | INFO     | extracted standard info from prmon json
[2025-10-08 18:47:40] 2025-10-08 16:46:50,797 | INFO     | extracted standard memory fields from prmon json
[2025-10-08 18:47:40] 2025-10-08 16:46:50,797 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-08 18:47:40] 2025-10-08 16:46:50,797 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-08 18:47:40] 2025-10-08 16:46:50,797 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-08 18:47:40] 2025-10-08 16:46:50,798 | INFO     | fitting pss+swap vs Time
[2025-10-08 18:47:40] 2025-10-08 16:46:50,798 | INFO     | sum of square deviations: 115715658.0
[2025-10-08 18:47:40] 2025-10-08 16:46:50,798 | INFO     | sum of deviations: -10512137686.0
[2025-10-08 18:47:40] 2025-10-08 16:46:50,798 | INFO     | mean x: 1759939679.5
[2025-10-08 18:47:40] 2025-10-08 16:46:50,798 | INFO     | mean y: 2522514.472222222
[2025-10-08 18:47:40] 2025-10-08 16:46:50,798 | INFO     | -- intersect: 159883463000.14716
[2025-10-08 18:47:40] 2025-10-08 16:46:50,798 | INFO     | intersect: 159883463000.14716
[2025-10-08 18:47:40] 2025-10-08 16:46:50,798 | INFO     | chi2: 0.06907239810731518
[2025-10-08 18:47:40] 2025-10-08 16:46:50,798 | INFO     | -- intersect: 159883463000.14716
[2025-10-08 18:47:40] 2025-10-08 16:46:50,798 | INFO     | current memory leak: -90.84 B/s (using 72 data points, chi2=0.07)
[2025-10-08 18:47:40] 2025-10-08 16:46:50,798 | INFO     | could have reported an average CPU frequency of 3874 MHz (6 samples)
[2025-10-08 18:47:40] 2025-10-08 16:46:50,798 | INFO     | ..............................
[2025-10-08 18:47:40] 2025-10-08 16:46:50,798 | INFO     | . Timing measurements:
[2025-10-08 18:47:40] 2025-10-08 16:46:50,798 | INFO     | . get job = 0 s
[2025-10-08 18:47:40] 2025-10-08 16:46:50,798 | INFO     | . initial setup = 1 s
[2025-10-08 18:47:40] 2025-10-08 16:46:50,798 | INFO     | . payload setup = 2 s
[2025-10-08 18:47:40] 2025-10-08 16:46:50,798 | INFO     | . stage-in = 0 s
[2025-10-08 18:47:40] 2025-10-08 16:46:50,798 | INFO     | . payload execution = 4791 s
[2025-10-08 18:47:40] 2025-10-08 16:46:50,798 | INFO     | . stage-out = 0 s
[2025-10-08 18:47:40] 2025-10-08 16:46:50,798 | INFO     | . log creation = 0 s
[2025-10-08 18:47:40] 2025-10-08 16:46:50,798 | INFO     | ..............................
[2025-10-08 18:47:40] 2025-10-08 16:46:50,829 | INFO     | 
[2025-10-08 18:47:40] 2025-10-08 16:46:50,829 | INFO     | job summary report
[2025-10-08 18:47:40] 2025-10-08 16:46:50,829 | INFO     | --------------------------------------------------
[2025-10-08 18:47:40] 2025-10-08 16:46:50,829 | INFO     | PanDA job id: 6835975030
[2025-10-08 18:47:40] 2025-10-08 16:46:50,829 | INFO     | task id: 46676269
[2025-10-08 18:47:40] 2025-10-08 16:46:50,829 | INFO     | errors: (none)
[2025-10-08 18:47:40] 2025-10-08 16:46:50,829 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-08 18:47:40] 2025-10-08 16:46:50,829 | INFO     | pilot state: finished 
[2025-10-08 18:47:40] 2025-10-08 16:46:50,829 | INFO     | transexitcode: 0
[2025-10-08 18:47:40] 2025-10-08 16:46:50,829 | INFO     | exeerrorcode: 0
[2025-10-08 18:47:40] 2025-10-08 16:46:50,829 | INFO     | exeerrordiag: 
[2025-10-08 18:47:40] 2025-10-08 16:46:50,829 | INFO     | exitcode: 0
[2025-10-08 18:47:40] 2025-10-08 16:46:50,830 | INFO     | exitmsg: OK
[2025-10-08 18:47:40] 2025-10-08 16:46:50,830 | INFO     | cpuconsumptiontime: 13800 s
[2025-10-08 18:47:40] 2025-10-08 16:46:50,830 | INFO     | nevents: 400
[2025-10-08 18:47:40] 2025-10-08 16:46:50,830 | INFO     | neventsw: 0
[2025-10-08 18:47:40] 2025-10-08 16:46:50,830 | INFO     | pid: 2391936
[2025-10-08 18:47:40] 2025-10-08 16:46:50,830 | INFO     | pgrp: 2391936
[2025-10-08 18:47:40] 2025-10-08 16:46:50,830 | INFO     | corecount: 3
[2025-10-08 18:47:40] 2025-10-08 16:46:50,830 | INFO     | event service: False
[2025-10-08 18:47:40] 2025-10-08 16:46:50,830 | INFO     | sizes: {0: 2348855, 2: 2349117, 11: 2349145, 4798: 2384560, 4808: 2384698}
[2025-10-08 18:47:40] 2025-10-08 16:46:50,830 | INFO     | --------------------------------------------------
[2025-10-08 18:47:40] 2025-10-08 16:46:50,830 | INFO     | 
[2025-10-08 18:47:40] 2025-10-08 16:46:50,830 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-10-08 18:47:40] 2025-10-08 16:46:50,841 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-08 18:47:40] 2025-10-08 16:46:50,841 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-08 18:47:40] 2025-10-08 16:46:50,841 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-08 18:47:40] 2025-10-08 16:46:50,841 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-08 18:47:40] 2025-10-08 16:46:50,841 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-08 18:47:40] 2025-10-08 16:46:50,841 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-08 18:47:40] 2025-10-08 16:46:50,841 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-08 18:47:40] 2025-10-08 16:46:50,841 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-08 18:47:40] 2025-10-08 16:46:50,841 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-08 18:47:40] 2025-10-08 16:46:50,841 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-08 18:47:40] 2025-10-08 16:46:50,841 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-08 18:47:40] 2025-10-08 16:46:50,841 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-08 18:47:40] 2025-10-08 16:46:50,842 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-08 18:47:40] 2025-10-08 16:46:50,842 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-08 18:47:40] 2025-10-08 16:46:50,842 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-08 18:47:40] 2025-10-08 16:46:50,842 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-08 18:47:40] 2025-10-08 16:46:50,842 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-08 18:47:40] 2025-10-08 16:46:50,842 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-08 18:47:40] 2025-10-08 16:46:50,842 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-08 18:47:40] 2025-10-08 16:46:50,842 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-08 18:47:40] 2025-10-08 16:46:50,842 | INFO     | job 6835975030 has completed (purged errors)
[2025-10-08 18:47:40] 2025-10-08 16:46:50,842 | INFO     | overall cleanup function is called
[2025-10-08 18:47:40] 2025-10-08 16:46:51,848 | INFO     | --- collectZombieJob: --- 10, [2391936]
[2025-10-08 18:47:40] 2025-10-08 16:46:51,849 | INFO     | zombie collector waiting for pid 2391936
[2025-10-08 18:47:40] 2025-10-08 16:46:51,849 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-08 18:47:40] 2025-10-08 16:46:51,849 | INFO     | collected zombie processes
[2025-10-08 18:47:40] 2025-10-08 16:46:51,849 | INFO     | will attempt to kill all subprocesses of pid=2391936
[2025-10-08 18:47:40] 2025-10-08 16:46:51,891 | INFO     | process IDs to be killed: [2391936] (in reverse order)
[2025-10-08 18:47:40] 2025-10-08 16:46:51,915 | WARNING  | found no corresponding commands to process id(s)
[2025-10-08 18:47:40] 2025-10-08 16:46:51,915 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-08 18:47:40] 2025-10-08 16:46:51,916 | INFO     | did not find any defunct processes belonging to 2391936
[2025-10-08 18:47:40] 2025-10-08 16:46:51,917 | INFO     | did not find any defunct processes belonging to 2391936
[2025-10-08 18:47:40] 2025-10-08 16:46:51,917 | INFO     | ready for new job
[2025-10-08 18:47:40] 2025-10-08 16:46:51,917 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-08 18:47:40] 2025-10-08 16:46:51,918 | INFO     | ***************************************
[2025-10-08 18:47:40] 2025-10-08 16:46:51,918 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-08 18:47:40] 2025-10-08 16:46:51,918 | INFO     | ***************************************
[2025-10-08 18:47:40] 2025-10-08 16:46:51,918 | INFO     | 
[2025-10-08 18:47:40] 2025-10-08 16:46:51,919 | INFO     | architecture information:
[2025-10-08 18:47:40] 2025-10-08 16:46:51,919 | INFO     | executing command: cat /etc/os-release
[2025-10-08 18:47:40] 2025-10-08 16:46:51,927 | INFO     | cat /etc/os-release:
[2025-10-08 18:47:40] NAME="CentOS Linux"
[2025-10-08 18:47:40] VERSION="7 (Core)"
[2025-10-08 18:47:40] ID="centos"
[2025-10-08 18:47:40] ID_LIKE="rhel fedora"
[2025-10-08 18:47:40] VERSION_ID="7"
[2025-10-08 18:47:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-08 18:47:40] ANSI_COLOR="0;31"
[2025-10-08 18:47:40] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-08 18:47:40] HOME_URL="https://www.centos.org/"
[2025-10-08 18:47:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-08 18:47:40] 
[2025-10-08 18:47:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-08 18:47:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-08 18:47:40] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-08 18:47:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-08 18:47:40] 
[2025-10-08 18:47:40] 2025-10-08 16:46:51,928 | INFO     | ***************************************
[2025-10-08 18:47:40] 2025-10-08 16:46:52,431 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-08 18:47:40] 2025-10-08 16:46:52,444 | INFO     | sufficient remaining disk space (335742500864 B)
[2025-10-08 18:47:40] 2025-10-08 16:46:52,444 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-08 18:47:40] 2025-10-08 16:46:52,444 | INFO     | current server update state: UPDATING_FINAL
[2025-10-08 18:47:40] 2025-10-08 16:46:52,445 | INFO     | update_server=False
[2025-10-08 18:47:40] 2025-10-08 16:46:52,445 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-08 18:47:40] 2025-10-08 16:46:52,445 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-08 18:47:40] 2025-10-08 16:46:52,445 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-08 18:47:40] 2025-10-08 16:46:52,445 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-08 18:47:40] 2025-10-08 16:46:52,662 | INFO     | all job control threads have been joined
[2025-10-08 18:47:40] 2025-10-08 16:46:53,263 | INFO     | all data control threads have been joined
[2025-10-08 18:47:40] 2025-10-08 16:46:53,384 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-08 18:47:40] 2025-10-08 16:46:53,384 | INFO     | aborting loop
[2025-10-08 18:47:40] 2025-10-08 16:46:53,450 | INFO     | [job] queue monitor thread has finished
[2025-10-08 18:47:40] 2025-10-08 16:46:53,451 | INFO     | [job] retrieve thread has finished
[2025-10-08 18:47:40] 2025-10-08 16:46:53,603 | INFO     | all payload control threads have been joined
[2025-10-08 18:47:40] 2025-10-08 16:46:53,668 | INFO     | [job] control thread has finished
[2025-10-08 18:47:40] 2025-10-08 16:46:53,742 | INFO     | [data] copytool_in thread has finished
[2025-10-08 18:47:40] 2025-10-08 16:46:53,872 | INFO     | [payload] execute_payloads thread has finished
[2025-10-08 18:47:40] 2025-10-08 16:46:54,146 | INFO     | [payload] failed_post thread has finished
[2025-10-08 18:47:40] 2025-10-08 16:46:54,269 | INFO     | [data] control thread has finished
[2025-10-08 18:47:40] 2025-10-08 16:46:54,327 | INFO     | [job] validate thread has finished
[2025-10-08 18:47:40] 2025-10-08 16:46:54,364 | INFO     | [job] create_data_payload thread has finished
[2025-10-08 18:47:40] 2025-10-08 16:46:54,390 | INFO     | [job] job monitor thread has finished
[2025-10-08 18:47:40] 2025-10-08 16:46:54,448 | INFO     | [data] copytool_out thread has finished
[2025-10-08 18:47:40] 2025-10-08 16:46:54,470 | INFO     | [payload] validate_pre thread has finished
[2025-10-08 18:47:40] 2025-10-08 16:46:54,609 | INFO     | [payload] control thread has finished
[2025-10-08 18:47:40] 2025-10-08 16:46:54,696 | INFO     | [payload] validate_post thread has finished
[2025-10-08 18:47:40] 2025-10-08 16:46:56,452 | INFO     | [data] queue_monitor thread has finished
[2025-10-08 18:47:40] 2025-10-08 16:47:02,763 | INFO     | job.realtimelogging is not enabled
[2025-10-08 18:47:40] 2025-10-08 16:47:03,769 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-08 18:47:40] 2025-10-08 16:47:22,834 | INFO     | PID=2385509 has CPU usage=0.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-08 18:47:40] 2025-10-08 16:47:22,835 | INFO     | found 0 job(s) in 20 queues
[2025-10-08 18:47:40] 2025-10-08 16:47:22,835 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-08 18:47:40] 2025-10-08 16:47:22,835 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-08 18:47:40] 2025-10-08 16:47:34,817 | INFO     | [monitor] cgroup control has ended
[2025-10-08 18:47:40] 2025-10-08 16:47:35,333 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140465550600000)>', '<ExcThread(monitor, started 140464531425024)>']
[2025-10-08 18:47:40] 2025-10-08 16:47:35,904 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-08 18:47:40] 2025-10-08 16:47:35,904 | INFO     | [monitor] control thread has ended
[2025-10-08 18:47:40] 2025-10-08 16:47:40,335 | INFO     | all workflow threads have been joined
[2025-10-08 18:47:40] 2025-10-08 16:47:40,336 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-08 18:47:40] 2025-10-08 16:47:40,337 | INFO     | traces error code: 0
[2025-10-08 18:47:40] 2025-10-08 16:47:40,337 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-08 18:47:40] 2025-10-08 16:47:40,386 [wrapper] ==== pilot stdout END ====
[2025-10-08 18:47:40] 2025-10-08 16:47:40,388 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-08 18:47:40] 2025-10-08 16:47:40,391 [wrapper] pilotpid: 2385509
[2025-10-08 18:47:40] 2025-10-08 16:47:40,393 [wrapper] Pilot exit status: 0
[2025-10-08 18:47:40] 2025-10-08 16:47:40,400 [wrapper] pandaids: 6835975030
[2025-10-08 18:47:40] 2025-10-08 16:47:40,415 [wrapper] cleanup supervisor_pilot 2403859 2385510
[2025-10-08 18:47:40] 2025-10-08 16:47:40,418 [wrapper] Test setup, not cleaning
[2025-10-08 18:47:40] 2025-10-08 16:47:40,420 [wrapper] apfmon messages muted
[2025-10-08 18:47:40] 2025-10-08 16:47:40,422 [wrapper] ==== wrapper stdout END ====
[2025-10-08 18:47:40] 2025-10-08 16:47:40,425 [wrapper] ==== wrapper stderr END ====
[2025-10-08 18:47:40]  *** Error codes and diagnostics ***
[2025-10-08 18:47:40]     "exeErrorCode": 0,
[2025-10-08 18:47:40]     "exeErrorDiag": "",
[2025-10-08 18:47:40]     "pilotErrorCode": 0,
[2025-10-08 18:47:40]     "pilotErrorDiag": "",
[2025-10-08 18:47:40]  *** Listing of results directory ***
[2025-10-08 18:47:40] total 410472
[2025-10-08 18:47:40] -rw-r--r-- 1 boinc boinc    557409 Oct  8 11:48 pilot3.tar.gz
[2025-10-08 18:47:40] -rw-r--r-- 1 boinc boinc      5112 Oct  8 11:52 queuedata.json
[2025-10-08 18:47:40] -rwx------ 1 boinc boinc     36292 Oct  8 11:52 runpilot2-wrapper.sh
[2025-10-08 18:47:40] -rw-r--r-- 1 boinc boinc       100 Oct  8 17:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-08 18:47:40] -rwxr-xr-x 1 boinc boinc      7986 Oct  8 17:26 run_atlas
[2025-10-08 18:47:40] -rw-r--r-- 1 boinc boinc       105 Oct  8 17:26 job.xml
[2025-10-08 18:47:40] -rw-r--r-- 2 boinc boinc 219644694 Oct  8 17:26 EVNT.46676267._000107.pool.root.1
[2025-10-08 18:47:40] -rw-r--r-- 2 boinc boinc    569679 Oct  8 17:26 input.tar.gz
[2025-10-08 18:47:40] -rw-r--r-- 2 boinc boinc     15120 Oct  8 17:26 start_atlas.sh
[2025-10-08 18:47:40] drwxrwx--x 2 boinc boinc      4096 Oct  8 17:26 shared
[2025-10-08 18:47:40] -rw-r--r-- 1 boinc boinc         0 Oct  8 17:26 boinc_setup_complete
[2025-10-08 18:47:40] -rw-r--r-- 1 boinc boinc      6442 Oct  8 17:26 init_data.xml
[2025-10-08 18:47:40] -rw-r--r-- 1 boinc boinc         0 Oct  8 17:26 boinc_lockfile
[2025-10-08 18:47:40] -rw-r--r-- 1 boinc boinc      2548 Oct  8 17:26 pandaJob.out
[2025-10-08 18:47:40] -rw------- 1 boinc boinc    979295 Oct  8 17:26 agis_schedconf.cvmfs.json
[2025-10-08 18:47:40] -rw------- 1 boinc boinc   1560401 Oct  8 17:26 agis_ddmendpoints.agis.ALL.json
[2025-10-08 18:47:40] drwx------ 5 boinc boinc      4096 Oct  8 17:26 pilot3
[2025-10-08 18:47:40] -rw------- 1 boinc boinc 194845917 Oct  8 18:46 HITS.46676269._002669.pool.root.1
[2025-10-08 18:47:40] -rw-r--r-- 1 boinc boinc       529 Oct  8 18:46 boinc_task_state.xml
[2025-10-08 18:47:40] -rw------- 1 boinc boinc      1020 Oct  8 18:46 memory_monitor_summary.json
[2025-10-08 18:47:40] -rw------- 1 boinc boinc    251423 Oct  8 18:46 log.46676269._002669.job.log.tgz.1
[2025-10-08 18:47:40] -rw------- 1 boinc boinc      7766 Oct  8 18:46 heartbeat.json
[2025-10-08 18:47:40] -rw------- 1 boinc boinc        95 Oct  8 18:47 pilot_heartbeat.json
[2025-10-08 18:47:40] -rw-r--r-- 1 boinc boinc      8192 Oct  8 18:47 boinc_mmap_file
[2025-10-08 18:47:40] -rw-r--r-- 1 boinc boinc        27 Oct  8 18:47 wrapper_checkpoint.txt
[2025-10-08 18:47:40] -rw------- 1 boinc boinc      4824 Oct  8 18:47 pilotlog.txt
[2025-10-08 18:47:40] -rw------- 1 boinc boinc    710392 Oct  8 18:47 log.46676269._002669.job.log.1
[2025-10-08 18:47:40] -rw------- 1 boinc boinc       357 Oct  8 18:47 output.list
[2025-10-08 18:47:40] -rw-r--r-- 1 boinc boinc       620 Oct  8 18:47 runtime_log
[2025-10-08 18:47:40] -rw------- 1 boinc boinc    983040 Oct  8 18:47 result.tar.gz
[2025-10-08 18:47:40] -rw-r--r-- 1 boinc boinc      8787 Oct  8 18:47 runtime_log.err
[2025-10-08 18:47:40] -rw------- 1 boinc boinc       660 Oct  8 18:47 mkMLDmm1fQ8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmBiXNDmCsajPn.diag
[2025-10-08 18:47:40] -rw-r--r-- 1 boinc boinc     22360 Oct  8 18:47 stderr.txt
[2025-10-08 18:47:40] HITS file was successfully produced:
[2025-10-08 18:47:40] -rw------- 1 boinc boinc 194845917 Oct  8 18:46 shared/HITS.pool.root.1
[2025-10-08 18:47:40]  *** Contents of shared directory: ***
[2025-10-08 18:47:40] total 406324
[2025-10-08 18:47:40] -rw-r--r-- 2 boinc boinc 219644694 Oct  8 17:26 ATLAS.root_0
[2025-10-08 18:47:40] -rw-r--r-- 2 boinc boinc    569679 Oct  8 17:26 input.tar.gz
[2025-10-08 18:47:40] -rw-r--r-- 2 boinc boinc     15120 Oct  8 17:26 start_atlas.sh
[2025-10-08 18:47:40] -rw------- 1 boinc boinc 194845917 Oct  8 18:46 HITS.pool.root.1
[2025-10-08 18:47:40] -rw------- 1 boinc boinc    983040 Oct  8 18:47 result.tar.gz
18:47:41 (2381784): run_atlas exited; CPU time 13816.837535
18:47:41 (2381784): called boinc_finish(0)

</stderr_txt>
]]>

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