Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:22:54 (2305): wrapper (7.7.26015): starting
08:22:54 (2305): wrapper: running run_atlas (--nthreads 8)
[2025-10-08 08:22:54] Arguments: --nthreads 8
[2025-10-08 08:22:54] Threads: 8
[2025-10-08 08:22:54] Checking for CVMFS
[2025-10-08 08:22:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 08:22:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 08:22:54] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 08:22:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 08:22:54] 2.11.2.0 25047 46984 108320 151472 3 188 19488956 20275200 873 130560 0 51674384 99.975 2201465 23088 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-08 08:22:54] CVMFS is ok
[2025-10-08 08:22:54] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-08 08:22:54] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-08 08:22:54] Further information can be found at the LHC@home message board.
[2025-10-08 08:22:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 08:22:54] Checking for apptainer binary...
[2025-10-08 08:22:54] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 08:22:54] Running /usr/bin/apptainer --version
[2025-10-08 08:22:54] apptainer version 1.3.2-1.el7
[2025-10-08 08:22:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 08:22:55] c-205-37.aglt2.org
[2025-10-08 08:22:55] apptainer works
[2025-10-08 08:22:55] Set ATHENA_PROC_NUMBER=8
[2025-10-08 08:22:55] Set ATHENA_CORE_NUMBER=8
[2025-10-08 08:22:55] Starting ATLAS job with PandaID=6835984091
[2025-10-08 08:22:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-08 09:28:20]  *** The last 200 lines of the pilot log: ***
[2025-10-08 09:28:20]  mtime=0
[2025-10-08 09:28:20]  protocol_id=None
[2025-10-08 09:28:20]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-08 09:28:20]  replicas=None
[2025-10-08 09:28:20]  scope=mc23_13p6TeV
[2025-10-08 09:28:20]  status=None
[2025-10-08 09:28:20]  status_code=0
[2025-10-08 09:28:20]  storage_token=
[2025-10-08 09:28:20]  surl=/tmp/boinchome/slots/1/PanDA_Pilot-6835984091/log.46676269._005287.job.log.tgz.1
[2025-10-08 09:28:20]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6c/5f/log.46676269._005287.job.log.tgz.1
[2025-10-08 09:28:20]  workdir=None
[2025-10-08 09:28:20] ]
[2025-10-08 09:28:20] 2025-10-08 13:27:44,719 | INFO     | transferring file log.46676269._005287.job.log.tgz.1 from /tmp/boinchome/slots/1/PanDA_Pilot-6835984091/log.46676269._005287.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-08 09:28:20] 2025-10-08 13:27:44,719 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/1/PanDA_Pilot-6835984091/log.46676269._005287.job.log.tgz.1 /tmp/boinchome/slots/1/log.46676269._005287.job
[2025-10-08 09:28:20] 2025-10-08 13:27:44,742 | INFO     | adding to output.list: log.46676269._005287.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6c/5f/log.46676269._005287.job.log.tg
[2025-10-08 09:28:20] 2025-10-08 13:27:44,742 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-08 09:28:20] 2025-10-08 13:27:44,742 | INFO     | summary of transferred files:
[2025-10-08 09:28:20] 2025-10-08 13:27:44,742 | INFO     |  -- lfn=log.46676269._005287.job.log.tgz.1, status_code=0, status=transferred
[2025-10-08 09:28:20] 2025-10-08 13:27:44,742 | INFO     | stage-out finished correctly
[2025-10-08 09:28:20] 2025-10-08 13:27:44,789 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-08 09:28:20] 2025-10-08 13:27:45,278 | INFO     | job 6835984091 has state=finished
[2025-10-08 09:28:20] 2025-10-08 13:27:45,279 | INFO     | preparing for final server update for job 6835984091 in state='finished'
[2025-10-08 09:28:20] 2025-10-08 13:27:45,279 | INFO     | this job has now completed (state=finished)
[2025-10-08 09:28:20] 2025-10-08 13:27:45,279 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-08 09:28:20] 2025-10-08 13:27:45,280 | INFO     | log transfer has been attempted: DONE
[2025-10-08 09:28:20] 2025-10-08 13:27:45,280 | INFO     | job 6835984091 has finished - writing final server update
[2025-10-08 09:28:20] 2025-10-08 13:27:45,280 | INFO     | total number of processed events: 400 (read)
[2025-10-08 09:28:20] 2025-10-08 13:27:45,281 | INFO     | executing command: lscpu
[2025-10-08 09:28:20] 2025-10-08 13:27:45,314 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-08 09:28:20] 2025-10-08 13:27:45,349 | INFO     | monitor loop #291: job 0:6835984091 is in state 'finished'
[2025-10-08 09:28:20] 2025-10-08 13:27:45,350 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 09:28:20] 2025-10-08 13:27:45,526 | INFO     | time since job start (3876s) is within the limit (172800.0s)
[2025-10-08 09:28:20] 2025-10-08 13:27:47,531 | INFO     | time since job start (3878s) is within the limit (172800.0s)
[2025-10-08 09:28:20] 2025-10-08 13:27:47,853 | INFO     | monitor loop #292: job 0:6835984091 is in state 'finished'
[2025-10-08 09:28:20] 2025-10-08 13:27:47,853 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 09:28:20] 2025-10-08 13:27:48,677 | INFO     | PID=6265 has CPU usage=6.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-08 09:28:20] 2025-10-08 13:27:49,678 | INFO     | time since job start (3880s) is within the limit (172800.0s)
[2025-10-08 09:28:20] 2025-10-08 13:27:49,764 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-08 09:28:20] 2025-10-08 13:27:49,768 | INFO     | found 16 cores (8 cores per socket, 2 sockets) , CPU MHz: 1333.2821875
[2025-10-08 09:28:20] 2025-10-08 13:27:49,772 | INFO     | using path: /tmp/boinchome/slots/1/PanDA_Pilot-6835984091/memory_monitor_summary.json (trf name=prmon)
[2025-10-08 09:28:20] 2025-10-08 13:27:49,773 | INFO     | extracted standard info from prmon json
[2025-10-08 09:28:20] 2025-10-08 13:27:49,773 | INFO     | extracted standard memory fields from prmon json
[2025-10-08 09:28:20] 2025-10-08 13:27:49,773 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-08 09:28:20] 2025-10-08 13:27:49,773 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-08 09:28:20] 2025-10-08 13:27:49,774 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-08 09:28:20] 2025-10-08 13:27:49,775 | INFO     | fitting pss+swap vs Time
[2025-10-08 09:28:20] 2025-10-08 13:27:49,776 | INFO     | sum of square deviations: 57407588.0
[2025-10-08 09:28:20] 2025-10-08 13:27:49,776 | INFO     | sum of deviations: -1056985674.0
[2025-10-08 09:28:20] 2025-10-08 13:27:49,776 | INFO     | mean x: 1759928229.0
[2025-10-08 09:28:20] 2025-10-08 13:27:49,776 | INFO     | mean y: 2641434.736842105
[2025-10-08 09:28:20] 2025-10-08 13:27:49,776 | INFO     | -- intersect: 32406353036.784836
[2025-10-08 09:28:20] 2025-10-08 13:27:49,777 | INFO     | intersect: 32406353036.784836
[2025-10-08 09:28:20] 2025-10-08 13:27:49,777 | INFO     | chi2: 0.017011658019310393
[2025-10-08 09:28:20] 2025-10-08 13:27:49,777 | INFO     | -- intersect: 32406353036.784836
[2025-10-08 09:28:20] 2025-10-08 13:27:49,777 | INFO     | current memory leak: -18.41 B/s (using 57 data points, chi2=0.02)
[2025-10-08 09:28:20] 2025-10-08 13:27:49,777 | INFO     | could have reported an average CPU frequency of 1776 MHz (6 samples)
[2025-10-08 09:28:20] 2025-10-08 13:27:49,778 | INFO     | ..............................
[2025-10-08 09:28:20] 2025-10-08 13:27:49,778 | INFO     | . Timing measurements:
[2025-10-08 09:28:20] 2025-10-08 13:27:49,778 | INFO     | . get job = 0 s
[2025-10-08 09:28:20] 2025-10-08 13:27:49,778 | INFO     | . initial setup = 2 s
[2025-10-08 09:28:20] 2025-10-08 13:27:49,778 | INFO     | . payload setup = 6 s
[2025-10-08 09:28:20] 2025-10-08 13:27:49,778 | INFO     | . stage-in = 0 s
[2025-10-08 09:28:20] 2025-10-08 13:27:49,778 | INFO     | . payload execution = 3848 s
[2025-10-08 09:28:20] 2025-10-08 13:27:49,778 | INFO     | . stage-out = 0 s
[2025-10-08 09:28:20] 2025-10-08 13:27:49,778 | INFO     | . log creation = 0 s
[2025-10-08 09:28:20] 2025-10-08 13:27:49,779 | INFO     | ..............................
[2025-10-08 09:28:20] 2025-10-08 13:27:49,858 | INFO     | 
[2025-10-08 09:28:20] 2025-10-08 13:27:49,858 | INFO     | job summary report
[2025-10-08 09:28:20] 2025-10-08 13:27:49,858 | INFO     | --------------------------------------------------
[2025-10-08 09:28:20] 2025-10-08 13:27:49,858 | INFO     | PanDA job id: 6835984091
[2025-10-08 09:28:20] 2025-10-08 13:27:49,858 | INFO     | task id: 46676269
[2025-10-08 09:28:20] 2025-10-08 13:27:49,858 | INFO     | errors: (none)
[2025-10-08 09:28:20] 2025-10-08 13:27:49,858 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-08 09:28:20] 2025-10-08 13:27:49,859 | INFO     | pilot state: finished 
[2025-10-08 09:28:20] 2025-10-08 13:27:49,859 | INFO     | transexitcode: 0
[2025-10-08 09:28:20] 2025-10-08 13:27:49,859 | INFO     | exeerrorcode: 0
[2025-10-08 09:28:20] 2025-10-08 13:27:49,859 | INFO     | exeerrordiag: 
[2025-10-08 09:28:20] 2025-10-08 13:27:49,859 | INFO     | exitcode: 0
[2025-10-08 09:28:20] 2025-10-08 13:27:49,859 | INFO     | exitmsg: OK
[2025-10-08 09:28:20] 2025-10-08 13:27:49,859 | INFO     | cpuconsumptiontime: 28698 s
[2025-10-08 09:28:20] 2025-10-08 13:27:49,859 | INFO     | nevents: 400
[2025-10-08 09:28:20] 2025-10-08 13:27:49,860 | INFO     | neventsw: 0
[2025-10-08 09:28:20] 2025-10-08 13:27:49,860 | INFO     | pid: 12622
[2025-10-08 09:28:20] 2025-10-08 13:27:49,860 | INFO     | pgrp: 12622
[2025-10-08 09:28:20] 2025-10-08 13:27:49,860 | INFO     | corecount: 8
[2025-10-08 09:28:20] 2025-10-08 13:27:49,860 | INFO     | event service: False
[2025-10-08 09:28:20] 2025-10-08 13:27:49,860 | INFO     | sizes: {0: 2348680, 1: 2348879, 5: 2349141, 11: 2349197, 3858: 2375080, 3860: 2384262, 3865: 2384400}
[2025-10-08 09:28:20] 2025-10-08 13:27:49,860 | INFO     | --------------------------------------------------
[2025-10-08 09:28:20] 2025-10-08 13:27:49,860 | INFO     | 
[2025-10-08 09:28:20] 2025-10-08 13:27:49,861 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-08 09:28:20] 2025-10-08 13:27:49,882 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-08 09:28:20] 2025-10-08 13:27:49,882 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-08 09:28:20] 2025-10-08 13:27:49,882 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-08 09:28:20] 2025-10-08 13:27:49,883 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-08 09:28:20] 2025-10-08 13:27:49,883 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-08 09:28:20] 2025-10-08 13:27:49,883 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-08 09:28:20] 2025-10-08 13:27:49,883 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-08 09:28:20] 2025-10-08 13:27:49,883 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-08 09:28:20] 2025-10-08 13:27:49,883 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-08 09:28:20] 2025-10-08 13:27:49,883 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-08 09:28:20] 2025-10-08 13:27:49,884 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-08 09:28:20] 2025-10-08 13:27:49,884 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-08 09:28:20] 2025-10-08 13:27:49,884 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-08 09:28:20] 2025-10-08 13:27:49,884 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-08 09:28:20] 2025-10-08 13:27:49,884 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-08 09:28:20] 2025-10-08 13:27:49,884 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-08 09:28:20] 2025-10-08 13:27:49,884 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-08 09:28:20] 2025-10-08 13:27:49,884 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-08 09:28:20] 2025-10-08 13:27:49,884 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-08 09:28:20] 2025-10-08 13:27:49,885 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-08 09:28:20] 2025-10-08 13:27:49,885 | INFO     | job 6835984091 has completed (purged errors)
[2025-10-08 09:28:20] 2025-10-08 13:27:49,885 | INFO     | overall cleanup function is called
[2025-10-08 09:28:20] 2025-10-08 13:27:50,893 | INFO     | --- collectZombieJob: --- 10, [12622]
[2025-10-08 09:28:20] 2025-10-08 13:27:50,893 | INFO     | zombie collector waiting for pid 12622
[2025-10-08 09:28:20] 2025-10-08 13:27:50,894 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-08 09:28:20] 2025-10-08 13:27:50,894 | INFO     | collected zombie processes
[2025-10-08 09:28:20] 2025-10-08 13:27:50,894 | INFO     | will attempt to kill all subprocesses of pid=12622
[2025-10-08 09:28:20] 2025-10-08 13:27:51,012 | INFO     | process IDs to be killed: [12622] (in reverse order)
[2025-10-08 09:28:20] 2025-10-08 13:27:51,070 | WARNING  | found no corresponding commands to process id(s)
[2025-10-08 09:28:20] 2025-10-08 13:27:51,070 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-08 09:28:20] 2025-10-08 13:27:51,074 | INFO     | did not find any defunct processes belonging to 12622
[2025-10-08 09:28:20] 2025-10-08 13:27:51,078 | INFO     | did not find any defunct processes belonging to 12622
[2025-10-08 09:28:20] 2025-10-08 13:27:51,079 | INFO     | ready for new job
[2025-10-08 09:28:20] 2025-10-08 13:27:51,079 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-08 09:28:20] 2025-10-08 13:27:51,081 | INFO     | ***************************************
[2025-10-08 09:28:20] 2025-10-08 13:27:51,081 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-08 09:28:20] 2025-10-08 13:27:51,081 | INFO     | ***************************************
[2025-10-08 09:28:20] 2025-10-08 13:27:51,081 | INFO     | 
[2025-10-08 09:28:20] 2025-10-08 13:27:51,082 | INFO     | architecture information:
[2025-10-08 09:28:20] 2025-10-08 13:27:51,083 | INFO     | executing command: cat /etc/os-release
[2025-10-08 09:28:20] 2025-10-08 13:27:51,099 | INFO     | cat /etc/os-release:
[2025-10-08 09:28:20] NAME="CentOS Linux"
[2025-10-08 09:28:20] VERSION="7 (Core)"
[2025-10-08 09:28:20] ID="centos"
[2025-10-08 09:28:20] ID_LIKE="rhel fedora"
[2025-10-08 09:28:20] VERSION_ID="7"
[2025-10-08 09:28:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-08 09:28:20] ANSI_COLOR="0;31"
[2025-10-08 09:28:20] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-08 09:28:20] HOME_URL="https://www.centos.org/"
[2025-10-08 09:28:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-08 09:28:20] 
[2025-10-08 09:28:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-08 09:28:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-08 09:28:20] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-08 09:28:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-08 09:28:20] 
[2025-10-08 09:28:20] 2025-10-08 13:27:51,099 | INFO     | ***************************************
[2025-10-08 09:28:20] 2025-10-08 13:27:51,603 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-08 09:28:20] 2025-10-08 13:27:51,622 | INFO     | sufficient remaining disk space (32989249536 B)
[2025-10-08 09:28:20] 2025-10-08 13:27:51,622 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-08 09:28:20] 2025-10-08 13:27:51,622 | INFO     | current server update state: UPDATING_FINAL
[2025-10-08 09:28:20] 2025-10-08 13:27:51,622 | INFO     | update_server=False
[2025-10-08 09:28:20] 2025-10-08 13:27:51,623 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-08 09:28:20] 2025-10-08 13:27:51,623 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-08 09:28:20] 2025-10-08 13:27:51,623 | INFO     | found 0 job(s) in 20 queues
[2025-10-08 09:28:20] 2025-10-08 13:27:51,624 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-08 09:28:20] 2025-10-08 13:27:51,624 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-08 09:28:20] 2025-10-08 13:27:51,624 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-08 09:28:20] 2025-10-08 13:27:51,624 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-08 09:28:20] 2025-10-08 13:27:51,625 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-08 09:28:20] 2025-10-08 13:27:51,625 | INFO     | aborting loop
[2025-10-08 09:28:20] 2025-10-08 13:27:51,916 | INFO     | all data control threads have been joined
[2025-10-08 09:28:20] 2025-10-08 13:27:52,265 | INFO     | all payload control threads have been joined
[2025-10-08 09:28:20] 2025-10-08 13:27:52,369 | INFO     | all job control threads have been joined
[2025-10-08 09:28:20] 2025-10-08 13:27:52,628 | INFO     | [job] retrieve thread has finished
[2025-10-08 09:28:20] 2025-10-08 13:27:52,631 | INFO     | [job] queue monitor thread has finished
[2025-10-08 09:28:20] 2025-10-08 13:27:52,631 | INFO     | [job] job monitor thread has finished
[2025-10-08 09:28:20] 2025-10-08 13:27:52,669 | INFO     | [data] copytool_in thread has finished
[2025-10-08 09:28:20] 2025-10-08 13:27:52,806 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-08 09:28:20] 2025-10-08 13:27:52,919 | INFO     | [data] control thread has finished
[2025-10-08 09:28:20] 2025-10-08 13:27:53,204 | INFO     | [payload] execute_payloads thread has finished
[2025-10-08 09:28:20] 2025-10-08 13:27:53,271 | INFO     | [payload] control thread has finished
[2025-10-08 09:28:20] 2025-10-08 13:27:53,374 | INFO     | [job] control thread has finished
[2025-10-08 09:28:20] 2025-10-08 13:27:53,586 | INFO     | [job] validate thread has finished
[2025-10-08 09:28:20] 2025-10-08 13:27:53,594 | INFO     | [job] create_data_payload thread has finished
[2025-10-08 09:28:20] 2025-10-08 13:27:53,800 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-08 09:28:20] 2025-10-08 13:27:53,865 | INFO     | [payload] validate_pre thread has finished
[2025-10-08 09:28:20] 2025-10-08 13:27:53,889 | INFO     | [payload] validate_post thread has finished
[2025-10-08 09:28:20] 2025-10-08 13:27:53,958 | INFO     | [payload] failed_post thread has finished
[2025-10-08 09:28:20] 2025-10-08 13:27:54,812 | INFO     | [data] copytool_out thread has finished
[2025-10-08 09:28:20] 2025-10-08 13:27:55,631 | INFO     | [data] queue_monitor thread has finished
[2025-10-08 09:28:20] 2025-10-08 13:28:15,048 | INFO     | [monitor] cgroup control has ended
[2025-10-08 09:28:20] 2025-10-08 13:28:15,079 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140393148426048)>', '<ExcThread(monitor, started 140392859158272)>']
[2025-10-08 09:28:20] 2025-10-08 13:28:15,747 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-08 09:28:20] 2025-10-08 13:28:15,747 | INFO     | [monitor] control thread has ended
[2025-10-08 09:28:20] 2025-10-08 13:28:20,105 | INFO     | all workflow threads have been joined
[2025-10-08 09:28:20] 2025-10-08 13:28:20,105 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-08 09:28:20] 2025-10-08 13:28:20,106 | INFO     | traces error code: 0
[2025-10-08 09:28:20] 2025-10-08 13:28:20,106 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-08 09:28:20] 2025-10-08 13:28:20,221 [wrapper] ==== pilot stdout END ====
[2025-10-08 09:28:20] 2025-10-08 13:28:20,225 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-08 09:28:20] 2025-10-08 13:28:20,228 [wrapper] pilotpid: 6265
[2025-10-08 09:28:20] 2025-10-08 13:28:20,232 [wrapper] Pilot exit status: 0
[2025-10-08 09:28:20] 2025-10-08 13:28:20,244 [wrapper] pandaids: 6835984091
[2025-10-08 09:28:20] 2025-10-08 13:28:20,288 [wrapper] cleanup supervisor_pilot 15168 6266
[2025-10-08 09:28:20] 2025-10-08 13:28:20,291 [wrapper] Test setup, not cleaning
[2025-10-08 09:28:20] 2025-10-08 13:28:20,295 [wrapper] apfmon messages muted
[2025-10-08 09:28:20] 2025-10-08 13:28:20,299 [wrapper] ==== wrapper stdout END ====
[2025-10-08 09:28:20] 2025-10-08 13:28:20,302 [wrapper] ==== wrapper stderr END ====
[2025-10-08 09:28:20]  *** Error codes and diagnostics ***
[2025-10-08 09:28:20]     "exeErrorCode": 0,
[2025-10-08 09:28:20]     "exeErrorDiag": "",
[2025-10-08 09:28:20]     "pilotErrorCode": 0,
[2025-10-08 09:28:20]     "pilotErrorDiag": "",
[2025-10-08 09:28:20]  *** Listing of results directory ***
[2025-10-08 09:28:20] total 412436
[2025-10-08 09:28:20] -rw-r--r-- 1 boincer umatlas    557409 Oct  8 06:04 pilot3.tar.gz
[2025-10-08 09:28:20] -rw-r--r-- 1 boincer umatlas      5112 Oct  8 06:12 queuedata.json
[2025-10-08 09:28:20] -rwx------ 1 boincer umatlas     36292 Oct  8 06:12 runpilot2-wrapper.sh
[2025-10-08 09:28:20] -rw-r--r-- 1 boincer umatlas       100 Oct  8 08:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-08 09:28:20] -rwxr-xr-x 1 boincer umatlas      7986 Oct  8 08:22 run_atlas
[2025-10-08 09:28:20] -rw-r--r-- 1 boincer umatlas       105 Oct  8 08:22 job.xml
[2025-10-08 09:28:20] -rw-r--r-- 2 boincer umatlas    569676 Oct  8 08:22 input.tar.gz
[2025-10-08 09:28:20] -rw-r--r-- 2 boincer umatlas 224752434 Oct  8 08:22 EVNT.46676267._000212.pool.root.1
[2025-10-08 09:28:20] -rw-r--r-- 2 boincer umatlas     15120 Oct  8 08:22 start_atlas.sh
[2025-10-08 09:28:20] drwxrwx--x 2 boincer umatlas      4096 Oct  8 08:22 shared
[2025-10-08 09:28:20] -rw-r--r-- 1 boincer umatlas         0 Oct  8 08:22 boinc_lockfile
[2025-10-08 09:28:20] -rw-r--r-- 1 boincer umatlas      2547 Oct  8 08:22 pandaJob.out
[2025-10-08 09:28:20] -rw------- 1 boincer umatlas    979337 Oct  8 08:23 agis_schedconf.cvmfs.json
[2025-10-08 09:28:20] -rw------- 1 boincer umatlas   1560401 Oct  8 08:23 agis_ddmendpoints.agis.ALL.json
[2025-10-08 09:28:20] drwx------ 5 boincer umatlas      4096 Oct  8 08:23 pilot3
[2025-10-08 09:28:20] -rw-r--r-- 1 boincer umatlas      6135 Oct  8 09:22 init_data.xml
[2025-10-08 09:28:20] -rw------- 1 boincer umatlas        95 Oct  8 09:26 pilot_heartbeat.json
[2025-10-08 09:28:20] -rw------- 1 boincer umatlas 191890748 Oct  8 09:27 HITS.46676269._005287.pool.root.1
[2025-10-08 09:28:20] -rw-r--r-- 1 boincer umatlas       529 Oct  8 09:27 boinc_task_state.xml
[2025-10-08 09:28:20] -rw------- 1 boincer umatlas      1042 Oct  8 09:27 memory_monitor_summary.json
[2025-10-08 09:28:20] -rw------- 1 boincer umatlas    308449 Oct  8 09:27 log.46676269._005287.job.log.tgz.1
[2025-10-08 09:28:20] -rw------- 1 boincer umatlas      7828 Oct  8 09:27 heartbeat.json
[2025-10-08 09:28:20] -rw-r--r-- 1 boincer umatlas      8192 Oct  8 09:27 boinc_mmap_file
[2025-10-08 09:28:20] -rw-r--r-- 1 boincer umatlas        27 Oct  8 09:27 wrapper_checkpoint.txt
[2025-10-08 09:28:20] -rw------- 1 boincer umatlas      4552 Oct  8 09:28 pilotlog.txt
[2025-10-08 09:28:20] -rw------- 1 boincer umatlas    583864 Oct  8 09:28 log.46676269._005287.job.log.1
[2025-10-08 09:28:20] -rw------- 1 boincer umatlas       357 Oct  8 09:28 output.list
[2025-10-08 09:28:20] -rw-r--r-- 1 boincer umatlas       620 Oct  8 09:28 runtime_log
[2025-10-08 09:28:20] -rw------- 1 boincer umatlas    911360 Oct  8 09:28 result.tar.gz
[2025-10-08 09:28:20] -rw-r--r-- 1 boincer umatlas      8703 Oct  8 09:28 runtime_log.err
[2025-10-08 09:28:20] -rw------- 1 boincer umatlas       657 Oct  8 09:28 hQ4MDmoKgQ8n9Rq4apOajLDm4fhM0noT9bVof3QYDm4XMMDmMQjBFo.diag
[2025-10-08 09:28:20] -rw-r--r-- 1 boincer umatlas     21696 Oct  8 09:28 stderr.txt
[2025-10-08 09:28:20] HITS file was successfully produced:
[2025-10-08 09:28:20] -rw------- 1 boincer umatlas 191890748 Oct  8 09:27 shared/HITS.pool.root.1
[2025-10-08 09:28:20]  *** Contents of shared directory: ***
[2025-10-08 09:28:20] total 408356
[2025-10-08 09:28:20] -rw-r--r-- 2 boincer umatlas    569676 Oct  8 08:22 input.tar.gz
[2025-10-08 09:28:20] -rw-r--r-- 2 boincer umatlas 224752434 Oct  8 08:22 ATLAS.root_0
[2025-10-08 09:28:20] -rw-r--r-- 2 boincer umatlas     15120 Oct  8 08:22 start_atlas.sh
[2025-10-08 09:28:20] -rw------- 1 boincer umatlas 191890748 Oct  8 09:27 HITS.pool.root.1
[2025-10-08 09:28:20] -rw------- 1 boincer umatlas    911360 Oct  8 09:28 result.tar.gz
09:28:22 (2305): run_atlas exited; CPU time 28696.796811
09:28:22 (2305): called boinc_finish(0)

</stderr_txt>
]]>

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