Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:55:03 (2583078): wrapper (7.7.26015): starting
02:55:03 (2583078): wrapper: running run_atlas (--nthreads 4)
[2025-10-12 02:55:03] Arguments: --nthreads 4
[2025-10-12 02:55:03] Threads: 4
[2025-10-12 02:55:03] Checking for CVMFS
[2025-10-12 02:55:03] No cvmfs_config command found, will try listing directly
[2025-10-12 02:55:03] CVMFS is ok
[2025-10-12 02:55:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-12 02:55:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-12 02:55:03] Further information can be found at the LHC@home message board.
[2025-10-12 02:55:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-12 02:55:03] Checking for apptainer binary...
[2025-10-12 02:55:03] which: no apptainer in ((null))
[2025-10-12 02:55:03] apptainer is not installed, using version from CVMFS
[2025-10-12 02:55:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-12 02:55:03] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot52/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2025-10-12 02:55:03] apptainer works
[2025-10-12 02:55:03] Set ATHENA_PROC_NUMBER=4
[2025-10-12 02:55:03] Set ATHENA_CORE_NUMBER=4
[2025-10-12 02:55:03] Starting ATLAS job with PandaID=6835983630
[2025-10-12 02:55:03] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot52/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-12 06:13:06]  *** The last 200 lines of the pilot log: ***
[2025-10-12 06:13:06] 2025-10-12 03:55:47,559 | INFO     | current chi2=0.01082959583246461 (change=26.960708568716 %)
[2025-10-12 06:13:06] 2025-10-12 03:55:47,560 | INFO     | sum of square deviations: 1318277740.5
[2025-10-12 06:13:06] 2025-10-12 03:55:47,561 | INFO     | sum of deviations: 3095472175.5
[2025-10-12 06:13:06] 2025-10-12 03:55:47,561 | INFO     | mean x: 1760236366.5
[2025-10-12 06:13:06] 2025-10-12 03:55:47,561 | INFO     | mean y: 2331546.1666666665
[2025-10-12 06:13:06] 2025-10-12 03:55:47,561 | INFO     | -- intersect: -4130911796.573346
[2025-10-12 06:13:06] 2025-10-12 03:55:47,561 | INFO     | intersect: -4130911796.573346
[2025-10-12 06:13:06] 2025-10-12 03:55:47,561 | INFO     | chi2: 0.0063225897475139535
[2025-10-12 06:13:06] 2025-10-12 03:55:47,562 | INFO     | current chi2=0.0063225897475139535 (change=41.61749112962924 %)
[2025-10-12 06:13:06] 2025-10-12 03:55:47,562 | INFO     | sum of square deviations: 1199940638.0
[2025-10-12 06:13:06] 2025-10-12 03:55:47,563 | INFO     | sum of deviations: 4609782261.000001
[2025-10-12 06:13:06] 2025-10-12 03:55:47,563 | INFO     | mean x: 1760236519.0
[2025-10-12 06:13:06] 2025-10-12 03:55:47,563 | INFO     | mean y: 2329599.4012738853
[2025-10-12 06:13:06] 2025-10-12 03:55:47,563 | INFO     | -- intersect: -6759927485.228434
[2025-10-12 06:13:06] 2025-10-12 03:55:47,563 | INFO     | intersect: -6759927485.228434
[2025-10-12 06:13:06] 2025-10-12 03:55:47,564 | INFO     | chi2: 0.000705312422690199
[2025-10-12 06:13:06] 2025-10-12 03:55:47,564 | INFO     | current chi2=0.000705312422690199 (change=88.84456447664458 %)
[2025-10-12 06:13:06] 2025-10-12 03:55:47,564 | INFO     | sum of square deviations: 1088905998.0
[2025-10-12 06:13:06] 2025-10-12 03:55:47,565 | INFO     | sum of deviations: 3811941514.4999995
[2025-10-12 06:13:06] 2025-10-12 03:55:47,565 | INFO     | mean x: 1760236671.5
[2025-10-12 06:13:06] 2025-10-12 03:55:47,565 | INFO     | mean y: 2330694.4539473685
[2025-10-12 06:13:06] 2025-10-12 03:55:47,565 | INFO     | -- intersect: -6159743218.0419855
[2025-10-12 06:13:06] 2025-10-12 03:55:47,565 | INFO     | intersect: -6159743218.0419855
[2025-10-12 06:13:06] 2025-10-12 03:55:47,566 | INFO     | chi2: 0.0004470520727378556
[2025-10-12 06:13:06] 2025-10-12 03:55:47,566 | INFO     | current chi2=0.0004470520727378556 (change=36.61644707281464 %)
[2025-10-12 06:13:06] 2025-10-12 03:55:47,566 | INFO     | sum of square deviations: 984941258.0
[2025-10-12 06:13:06] 2025-10-12 03:55:47,567 | INFO     | sum of deviations: 3189389697.0
[2025-10-12 06:13:06] 2025-10-12 03:55:47,567 | INFO     | mean x: 1760236824.0
[2025-10-12 06:13:06] 2025-10-12 03:55:47,567 | INFO     | mean y: 2331606.768707483
[2025-10-12 06:13:06] 2025-10-12 03:55:47,567 | INFO     | -- intersect: -5697583129.411023
[2025-10-12 06:13:06] 2025-10-12 03:55:47,567 | INFO     | intersect: -5697583129.411023
[2025-10-12 06:13:06] 2025-10-12 03:55:47,568 | INFO     | chi2: 0.0003093593004774409
[2025-10-12 06:13:06] 2025-10-12 03:55:47,568 | INFO     | current chi2=0.0003093593004774409 (change=30.80016415473721 %)
[2025-10-12 06:13:06] 2025-10-12 03:55:47,568 | INFO     | sum of square deviations: 887813855.5
[2025-10-12 06:13:06] 2025-10-12 03:55:47,569 | INFO     | sum of deviations: 2735237590.4999995
[2025-10-12 06:13:06] 2025-10-12 03:55:47,569 | INFO     | mean x: 1760236976.5
[2025-10-12 06:13:06] 2025-10-12 03:55:47,569 | INFO     | mean y: 2332317.471830986
[2025-10-12 06:13:06] 2025-10-12 03:55:47,569 | INFO     | -- intersect: -5420726037.028995
[2025-10-12 06:13:06] 2025-10-12 03:55:47,569 | INFO     | intersect: -5420726037.028995
[2025-10-12 06:13:06] 2025-10-12 03:55:47,569 | INFO     | chi2: 0.0002530466700810712
[2025-10-12 06:13:06] 2025-10-12 03:55:47,570 | INFO     | current chi2=0.0002530466700810712 (change=18.202986077826395 %)
[2025-10-12 06:13:06] 2025-10-12 03:55:47,570 | INFO     | left removable region: 70
[2025-10-12 06:13:06] 2025-10-12 03:55:47,570 | INFO     | sum of square deviations: 319447850.0
[2025-10-12 06:13:06] 2025-10-12 03:55:47,570 | INFO     | sum of deviations: 964991147.0
[2025-10-12 06:13:06] 2025-10-12 03:55:47,571 | INFO     | mean x: 1760237861.0
[2025-10-12 06:13:06] 2025-10-12 03:55:47,571 | INFO     | mean y: 2335409.1386138615
[2025-10-12 06:13:06] 2025-10-12 03:55:47,571 | INFO     | -- intersect: -5315008102.421149
[2025-10-12 06:13:06] 2025-10-12 03:55:47,571 | INFO     | intersect: -5315008102.421149
[2025-10-12 06:13:06] 2025-10-12 03:55:47,571 | INFO     | chi2: 0.00019194677554929847
[2025-10-12 06:13:06] 2025-10-12 03:55:47,571 | INFO     | -- intersect: -5315008102.421149
[2025-10-12 06:13:06] 2025-10-12 03:55:47,571 | INFO     | current memory leak: 3.02 B/s (using 101 data points, chi2=0.00)
[2025-10-12 06:13:06] 2025-10-12 03:55:47,572 | INFO     | could have reported an average CPU frequency of 2635 MHz (9 samples)
[2025-10-12 06:13:06] 2025-10-12 03:55:47,572 | INFO     | ..............................
[2025-10-12 06:13:06] 2025-10-12 03:55:47,572 | INFO     | . Timing measurements:
[2025-10-12 06:13:06] 2025-10-12 03:55:47,572 | INFO     | . get job = 0 s
[2025-10-12 06:13:06] 2025-10-12 03:55:47,573 | INFO     | . initial setup = 1 s
[2025-10-12 06:13:06] 2025-10-12 03:55:47,573 | INFO     | . payload setup = 6 s
[2025-10-12 06:13:06] 2025-10-12 03:55:47,573 | INFO     | . stage-in = 0 s
[2025-10-12 06:13:06] 2025-10-12 03:55:47,573 | INFO     | . payload execution = 10797 s
[2025-10-12 06:13:06] 2025-10-12 03:55:47,573 | INFO     | . stage-out = 1 s
[2025-10-12 06:13:06] 2025-10-12 03:55:47,573 | INFO     | . log creation = 0 s
[2025-10-12 06:13:06] 2025-10-12 03:55:47,573 | INFO     | ..............................
[2025-10-12 06:13:06] 2025-10-12 03:55:47,678 | INFO     | 
[2025-10-12 06:13:06] 2025-10-12 03:55:47,679 | INFO     | job summary report
[2025-10-12 06:13:06] 2025-10-12 03:55:47,679 | INFO     | --------------------------------------------------
[2025-10-12 06:13:06] 2025-10-12 03:55:47,679 | INFO     | PanDA job id: 6835983630
[2025-10-12 06:13:06] 2025-10-12 03:55:47,679 | INFO     | task id: 46676269
[2025-10-12 06:13:06] 2025-10-12 03:55:47,679 | INFO     | errors: (none)
[2025-10-12 06:13:06] 2025-10-12 03:55:47,679 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-12 06:13:06] 2025-10-12 03:55:47,679 | INFO     | pilot state: finished 
[2025-10-12 06:13:06] 2025-10-12 03:55:47,679 | INFO     | transexitcode: 0
[2025-10-12 06:13:06] 2025-10-12 03:55:47,679 | INFO     | exeerrorcode: 0
[2025-10-12 06:13:06] 2025-10-12 03:55:47,679 | INFO     | exeerrordiag: 
[2025-10-12 06:13:06] 2025-10-12 03:55:47,679 | INFO     | exitcode: 0
[2025-10-12 06:13:06] 2025-10-12 03:55:47,679 | INFO     | exitmsg: OK
[2025-10-12 06:13:06] 2025-10-12 03:55:47,680 | INFO     | cpuconsumptiontime: 41283 s
[2025-10-12 06:13:06] 2025-10-12 03:55:47,680 | INFO     | nevents: 400
[2025-10-12 06:13:06] 2025-10-12 03:55:47,680 | INFO     | neventsw: 0
[2025-10-12 06:13:06] 2025-10-12 03:55:47,680 | INFO     | pid: 2635224
[2025-10-12 06:13:06] 2025-10-12 03:55:47,680 | INFO     | pgrp: 2635224
[2025-10-12 06:13:06] 2025-10-12 03:55:47,680 | INFO     | corecount: 4
[2025-10-12 06:13:06] 2025-10-12 03:55:47,680 | INFO     | event service: False
[2025-10-12 06:13:06] 2025-10-12 03:55:47,680 | INFO     | sizes: {0: 2348692, 1: 2348891, 5: 2349153, 12: 2349209, 10807: 2378284, 10809: 2387304, 10811: 2387488, 10818: 2387746}
[2025-10-12 06:13:06] 2025-10-12 03:55:47,680 | INFO     | --------------------------------------------------
[2025-10-12 06:13:06] 2025-10-12 03:55:47,680 | INFO     | 
[2025-10-12 06:13:06] 2025-10-12 03:55:47,680 | INFO     | executing command: ls -lF /scratch/boinc/var/slot52/slots/0
[2025-10-12 06:13:06] 2025-10-12 03:55:47,703 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-12 06:13:06] 2025-10-12 03:55:47,703 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-12 06:13:06] 2025-10-12 03:55:47,703 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-12 06:13:06] 2025-10-12 03:55:47,704 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-12 06:13:06] 2025-10-12 03:55:47,704 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-12 06:13:06] 2025-10-12 03:55:47,704 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-12 06:13:06] 2025-10-12 03:55:47,704 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-12 06:13:06] 2025-10-12 03:55:47,704 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-12 06:13:06] 2025-10-12 03:55:47,704 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-12 06:13:06] 2025-10-12 03:55:47,704 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-12 06:13:06] 2025-10-12 03:55:47,704 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-12 06:13:06] 2025-10-12 03:55:47,704 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-12 06:13:06] 2025-10-12 03:55:47,704 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-12 06:13:06] 2025-10-12 03:55:47,704 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-12 06:13:06] 2025-10-12 03:55:47,705 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-12 06:13:06] 2025-10-12 03:55:47,705 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-12 06:13:06] 2025-10-12 03:55:47,705 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-12 06:13:06] 2025-10-12 03:55:47,705 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-12 06:13:06] 2025-10-12 03:55:47,705 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-12 06:13:06] 2025-10-12 03:55:47,705 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-12 06:13:06] 2025-10-12 03:55:47,705 | INFO     | job 6835983630 has completed (purged errors)
[2025-10-12 06:13:06] 2025-10-12 03:55:47,705 | INFO     | overall cleanup function is called
[2025-10-12 06:13:06] 2025-10-12 03:55:48,714 | INFO     | --- collectZombieJob: --- 10, [2635224]
[2025-10-12 06:13:06] 2025-10-12 03:55:48,714 | INFO     | zombie collector waiting for pid 2635224
[2025-10-12 06:13:06] 2025-10-12 03:55:48,714 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-12 06:13:06] 2025-10-12 03:55:48,714 | INFO     | collected zombie processes
[2025-10-12 06:13:06] 2025-10-12 03:55:48,714 | INFO     | will attempt to kill all subprocesses of pid=2635224
[2025-10-12 06:13:06] 2025-10-12 03:55:49,090 | INFO     | process IDs to be killed: [2635224] (in reverse order)
[2025-10-12 06:13:06] 2025-10-12 03:55:49,199 | WARNING  | found no corresponding commands to process id(s)
[2025-10-12 06:13:06] 2025-10-12 03:55:49,200 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-12 06:13:06] 2025-10-12 03:55:49,212 | INFO     | did not find any defunct processes belonging to 2635224
[2025-10-12 06:13:06] 2025-10-12 03:55:49,224 | INFO     | did not find any defunct processes belonging to 2635224
[2025-10-12 06:13:06] 2025-10-12 03:55:49,224 | INFO     | ready for new job
[2025-10-12 06:13:06] 2025-10-12 03:55:49,224 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-12 06:13:06] 2025-10-12 03:55:49,227 | INFO     | ***************************************
[2025-10-12 06:13:06] 2025-10-12 03:55:49,228 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-12 06:13:06] 2025-10-12 03:55:49,228 | INFO     | ***************************************
[2025-10-12 06:13:06] 2025-10-12 03:55:49,228 | INFO     | 
[2025-10-12 06:13:06] 2025-10-12 03:55:49,232 | INFO     | architecture information:
[2025-10-12 06:13:06] 2025-10-12 03:55:49,232 | INFO     | executing command: cat /etc/os-release
[2025-10-12 06:13:06] 2025-10-12 03:55:49,248 | INFO     | cat /etc/os-release:
[2025-10-12 06:13:06] NAME="CentOS Linux"
[2025-10-12 06:13:06] VERSION="7 (Core)"
[2025-10-12 06:13:06] ID="centos"
[2025-10-12 06:13:06] ID_LIKE="rhel fedora"
[2025-10-12 06:13:06] VERSION_ID="7"
[2025-10-12 06:13:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-12 06:13:06] ANSI_COLOR="0;31"
[2025-10-12 06:13:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-12 06:13:06] HOME_URL="https://www.centos.org/"
[2025-10-12 06:13:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-12 06:13:06] 
[2025-10-12 06:13:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-12 06:13:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-12 06:13:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-12 06:13:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-12 06:13:06] 
[2025-10-12 06:13:06] 2025-10-12 03:55:49,248 | INFO     | ***************************************
[2025-10-12 06:13:06] 2025-10-12 03:55:49,751 | INFO     | executing command: df -mP /scratch/boinc/var/slot52/slots/0
[2025-10-12 06:13:06] 2025-10-12 03:55:49,770 | INFO     | sufficient remaining disk space (695605395456 B)
[2025-10-12 06:13:06] 2025-10-12 03:55:49,770 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-12 06:13:06] 2025-10-12 03:55:49,770 | INFO     | current server update state: UPDATING_FINAL
[2025-10-12 06:13:06] 2025-10-12 03:55:49,771 | INFO     | update_server=False
[2025-10-12 06:13:06] 2025-10-12 03:55:49,771 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-12 06:13:06] 2025-10-12 03:55:49,771 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-12 06:13:06] 2025-10-12 03:55:49,965 | INFO     | all payload control threads have been joined
[2025-10-12 06:13:06] 2025-10-12 03:55:50,174 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-12 06:13:06] 2025-10-12 03:55:50,174 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-12 06:13:06] 2025-10-12 03:55:50,174 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-12 06:13:06] 2025-10-12 03:55:50,175 | INFO     | will abort loop
[2025-10-12 06:13:06] 2025-10-12 03:55:50,453 | INFO     | all data control threads have been joined
[2025-10-12 06:13:06] 2025-10-12 03:55:50,770 | INFO     | all job control threads have been joined
[2025-10-12 06:13:06] 2025-10-12 03:55:50,776 | INFO     | [job] retrieve thread has finished
[2025-10-12 06:13:06] 2025-10-12 03:55:50,816 | INFO     | [payload] validate_pre thread has finished
[2025-10-12 06:13:06] 2025-10-12 03:55:50,821 | INFO     | [payload] validate_post thread has finished
[2025-10-12 06:13:06] 2025-10-12 03:55:50,841 | INFO     | [job] create_data_payload thread has finished
[2025-10-12 06:13:06] 2025-10-12 03:55:50,971 | INFO     | [payload] control thread has finished
[2025-10-12 06:13:06] 2025-10-12 03:55:51,180 | INFO     | [job] job monitor thread has finished
[2025-10-12 06:13:06] 2025-10-12 03:55:51,435 | INFO     | [payload] execute_payloads thread has finished
[2025-10-12 06:13:06] 2025-10-12 03:55:51,454 | INFO     | [payload] failed_post thread has finished
[2025-10-12 06:13:06] 2025-10-12 03:55:51,455 | INFO     | [data] control thread has finished
[2025-10-12 06:13:06] 2025-10-12 03:55:51,496 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-12 06:13:06] 2025-10-12 03:55:51,533 | INFO     | [job] validate thread has finished
[2025-10-12 06:13:06] 2025-10-12 03:55:51,775 | INFO     | [job] control thread has finished
[2025-10-12 06:13:06] 2025-10-12 03:55:51,776 | INFO     | [data] copytool_out thread has finished
[2025-10-12 06:13:06] 2025-10-12 03:55:51,870 | INFO     | [data] copytool_in thread has finished
[2025-10-12 06:13:06] 2025-10-12 03:55:52,689 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-12 06:13:06] 2025-10-12 03:55:53,692 | INFO     | [job] queue monitor thread has finished
[2025-10-12 06:13:06] 2025-10-12 03:55:55,502 | INFO     | [data] queue_monitor thread has finished
[2025-10-12 06:13:06] 2025-10-12 03:56:00,545 | INFO     | job.realtimelogging is not enabled
[2025-10-12 06:13:06] 2025-10-12 03:56:01,550 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-12 06:13:06] 2025-10-12 03:56:20,361 | INFO     | PID=2594435 has CPU usage=6.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-12 06:13:06] 2025-10-12 03:56:20,362 | INFO     | .. there are 5 such processes running
[2025-10-12 06:13:06] 2025-10-12 03:56:20,363 | INFO     | found 0 job(s) in 20 queues
[2025-10-12 06:13:06] 2025-10-12 03:56:20,364 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-12 06:13:06] 2025-10-12 03:56:20,364 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-12 06:13:06] 2025-10-12 03:56:31,344 | INFO     | [monitor] cgroup control has ended
[2025-10-12 06:13:06] 2025-10-12 03:56:32,881 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 22612567275328)>', '<ExcThread(monitor, started 22611985671936)>']
[2025-10-12 06:13:06] 2025-10-12 03:56:33,418 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-12 06:13:06] 2025-10-12 03:56:33,418 | INFO     | [monitor] control thread has ended
[2025-10-12 06:13:06] 2025-10-12 03:56:37,906 | INFO     | all workflow threads have been joined
[2025-10-12 06:13:06] 2025-10-12 03:56:37,906 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-12 06:13:06] 2025-10-12 03:56:37,907 | INFO     | traces error code: 0
[2025-10-12 06:13:06] 2025-10-12 03:56:37,907 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-12 06:13:06] 2025-10-12 03:56:38,089 [wrapper] ==== pilot stdout END ====
[2025-10-12 06:13:06] 2025-10-12 03:56:38,092 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-12 06:13:06] 2025-10-12 03:56:38,094 [wrapper] pilotpid: 2594435
[2025-10-12 06:13:06] 2025-10-12 03:56:38,097 [wrapper] Pilot exit status: 0
[2025-10-12 06:13:06] 2025-10-12 03:56:38,106 [wrapper] pandaids: 6835983630
[2025-10-12 06:13:06] 2025-10-12 03:56:38,183 [wrapper] cleanup supervisor_pilot 2851628 2594436
[2025-10-12 06:13:06] 2025-10-12 03:56:38,186 [wrapper] Test setup, not cleaning
[2025-10-12 06:13:06] 2025-10-12 03:56:38,189 [wrapper] apfmon messages muted
[2025-10-12 06:13:06] 2025-10-12 03:56:38,191 [wrapper] ==== wrapper stdout END ====
[2025-10-12 06:13:06] 2025-10-12 03:56:38,194 [wrapper] ==== wrapper stderr END ====
[2025-10-12 06:13:06]  *** Error codes and diagnostics ***
[2025-10-12 06:13:06]     "exeErrorCode": 0,
[2025-10-12 06:13:06]     "exeErrorDiag": "",
[2025-10-12 06:13:06]     "pilotErrorCode": 0,
[2025-10-12 06:13:06]     "pilotErrorDiag": "",
[2025-10-12 06:13:06]  *** Listing of results directory ***
[2025-10-12 06:13:06] total 413036
[2025-10-12 06:13:06] -rw-r--r-- 1 boinc boinc    557409 Oct  8 12:04 pilot3.tar.gz
[2025-10-12 06:13:06] -rwx------ 1 boinc boinc     36292 Oct  8 12:07 runpilot2-wrapper.sh
[2025-10-12 06:13:06] -rw-r--r-- 1 boinc boinc      5112 Oct  8 12:07 queuedata.json
[2025-10-12 06:13:06] -rw-r--r-- 1 boinc boinc       100 Oct 12 02:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-12 06:13:06] -rwxr-xr-x 1 boinc boinc      7986 Oct 12 02:54 run_atlas
[2025-10-12 06:13:06] -rw-r--r-- 1 boinc boinc       105 Oct 12 02:54 job.xml
[2025-10-12 06:13:06] -rw-r--r-- 2 boinc boinc 219555427 Oct 12 02:55 EVNT.46676267._000201.pool.root.1
[2025-10-12 06:13:06] -rw-r--r-- 1 boinc boinc      6634 Oct 12 02:55 init_data.xml
[2025-10-12 06:13:06] -rw-r--r-- 2 boinc boinc     15120 Oct 12 02:55 start_atlas.sh
[2025-10-12 06:13:06] drwxrwx--x 2 boinc boinc      4096 Oct 12 02:55 shared
[2025-10-12 06:13:06] -rw-r--r-- 2 boinc boinc    569682 Oct 12 02:55 input.tar.gz
[2025-10-12 06:13:06] -rw-r--r-- 1 boinc boinc         0 Oct 12 02:55 boinc_lockfile
[2025-10-12 06:13:06] -rw-r--r-- 1 boinc boinc      2548 Oct 12 02:55 pandaJob.out
[2025-10-12 06:13:06] -rw------- 1 boinc boinc    975496 Oct 12 02:55 agis_schedconf.cvmfs.json
[2025-10-12 06:13:06] drwx------ 5 boinc boinc      4096 Oct 12 02:55 pilot3
[2025-10-12 06:13:06] -rw------- 1 boinc boinc 195681205 Oct 12 05:54 HITS.46676269._005070.pool.root.1
[2025-10-12 06:13:06] -rw-r--r-- 1 boinc boinc       528 Oct 12 05:55 boinc_task_state.xml
[2025-10-12 06:13:06] -rw------- 1 boinc boinc      1032 Oct 12 05:55 memory_monitor_summary.json
[2025-10-12 06:13:06] -rw------- 1 boinc boinc   1560580 Oct 12 05:55 agis_ddmendpoints.agis.ALL.json
[2025-10-12 06:13:06] -rw------- 1 boinc boinc    359397 Oct 12 05:55 log.46676269._005070.job.log.tgz.1
[2025-10-12 06:13:06] -rw------- 1 boinc boinc      7826 Oct 12 05:55 heartbeat.json
[2025-10-12 06:13:06] -rw------- 1 boinc boinc        95 Oct 12 05:56 pilot_heartbeat.json
[2025-10-12 06:13:06] -rw------- 1 boinc boinc      5091 Oct 12 05:56 pilotlog.txt
[2025-10-12 06:13:06] -rw------- 1 boinc boinc   1544192 Oct 12 05:56 log.46676269._005070.job.log.1
[2025-10-12 06:13:06] -rw------- 1 boinc boinc       357 Oct 12 05:56 output.list
[2025-10-12 06:13:06] -rw-r--r-- 1 boinc boinc       620 Oct 12 05:56 runtime_log
[2025-10-12 06:13:06] -rw------- 1 boinc boinc   1925120 Oct 12 05:56 result.tar.gz
[2025-10-12 06:13:06] -rw-r--r-- 1 boinc boinc      9070 Oct 12 05:56 runtime_log.err
[2025-10-12 06:13:06] -rw------- 1 boinc boinc       665 Oct 12 05:56 TAdMDmvFgQ8n9Rq4apOajLDm4fhM0noT9bVof3QYDmXWMMDmRd3cum.diag
[2025-10-12 06:13:06] -rw-r--r-- 1 boinc boinc        27 Oct 12 06:12 wrapper_checkpoint.txt
[2025-10-12 06:13:06] -rw-r--r-- 1 boinc boinc      8192 Oct 12 06:13 boinc_mmap_file
[2025-10-12 06:13:06] -rw-r--r-- 1 boinc boinc     20791 Oct 12 06:13 stderr.txt
[2025-10-12 06:13:06] HITS file was successfully produced:
[2025-10-12 06:13:06] -rw------- 1 boinc boinc 195681205 Oct 12 05:54 shared/HITS.pool.root.1
[2025-10-12 06:13:06]  *** Contents of shared directory: ***
[2025-10-12 06:13:06] total 407972
[2025-10-12 06:13:06] -rw-r--r-- 2 boinc boinc 219555427 Oct 12 02:55 ATLAS.root_0
[2025-10-12 06:13:06] -rw-r--r-- 2 boinc boinc     15120 Oct 12 02:55 start_atlas.sh
[2025-10-12 06:13:06] -rw-r--r-- 2 boinc boinc    569682 Oct 12 02:55 input.tar.gz
[2025-10-12 06:13:06] -rw------- 1 boinc boinc 195681205 Oct 12 05:54 HITS.pool.root.1
[2025-10-12 06:13:06] -rw------- 1 boinc boinc   1925120 Oct 12 05:56 result.tar.gz
06:13:08 (2583078): run_atlas exited; CPU time 41746.845655
06:13:08 (2583078): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN