Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
13:12:40 (5336): wrapper (7.7.26015): starting
13:12:40 (5336): wrapper: running run_atlas (--nthreads 8)
[2025-10-08 13:12:40] Arguments: --nthreads 8
[2025-10-08 13:12:40] Threads: 8
[2025-10-08 13:12:40] Checking for CVMFS
[2025-10-08 13:12:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 13:12:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 13:12:41] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 13:12:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 13:12:41] 2.11.2.0 21130 214561 135600 151470 2 11 20490602 25165825 2316 130560 0 112872409 99.866 64761077 3121 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-08 13:12:41] CVMFS is ok
[2025-10-08 13:12:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 13:12:41] Checking for apptainer binary...
[2025-10-08 13:12:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 13:12:41] Running /usr/bin/apptainer --version
[2025-10-08 13:12:41] apptainer version 1.3.2-1.el7
[2025-10-08 13:12:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 13:12:43] cg-vwn411.simple-grid.lan
[2025-10-08 13:12:43] apptainer works
[2025-10-08 13:12:43] Set ATHENA_PROC_NUMBER=8
[2025-10-08 13:12:43] Set ATHENA_CORE_NUMBER=8
[2025-10-08 13:12:43] Starting ATLAS job with PandaID=6835984231
[2025-10-08 13:12:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/8 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-08 17:00:36]  *** The last 200 lines of the pilot log: ***
[2025-10-08 17:00:36] 2025-10-08 14:59:26,404 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-08 17:00:36] 2025-10-08 14:59:26,404 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-08 17:00:36] 2025-10-08 14:59:26,409 | INFO     | fitting pss+swap vs Time
[2025-10-08 17:00:36] 2025-10-08 14:59:26,410 | INFO     | sum of square deviations: 3346927870.0
[2025-10-08 17:00:36] 2025-10-08 14:59:26,412 | INFO     | sum of deviations: 9181619838.0
[2025-10-08 17:00:36] 2025-10-08 14:59:26,412 | INFO     | mean x: 1759928729.0
[2025-10-08 17:00:36] 2025-10-08 14:59:26,412 | INFO     | mean y: 2486749.4615384615
[2025-10-08 17:00:36] 2025-10-08 14:59:26,412 | INFO     | -- intersect: -4825521848.062413
[2025-10-08 17:00:36] 2025-10-08 14:59:26,412 | INFO     | intersect: -4825521848.062413
[2025-10-08 17:00:36] 2025-10-08 14:59:26,412 | INFO     | chi2: 2.362020488941952
[2025-10-08 17:00:36] 2025-10-08 14:59:26,413 | INFO     | sum of square deviations: 3124858590.0
[2025-10-08 17:00:36] 2025-10-08 14:59:26,415 | INFO     | sum of deviations: 23603969641.999992
[2025-10-08 17:00:36] 2025-10-08 14:59:26,415 | INFO     | mean x: 1759928576.5
[2025-10-08 17:00:36] 2025-10-08 14:59:26,415 | INFO     | mean y: 2496469.7592592593
[2025-10-08 17:00:36] 2025-10-08 14:59:26,415 | INFO     | -- intersect: -13291321312.822147
[2025-10-08 17:00:36] 2025-10-08 14:59:26,415 | INFO     | intersect: -13291321312.822147
[2025-10-08 17:00:36] 2025-10-08 14:59:26,415 | INFO     | chi2: 1.5944524779870586
[2025-10-08 17:00:36] 2025-10-08 14:59:26,415 | INFO     | current chi2=1.5944524779870586 (change=32.49624694401865 %)
[2025-10-08 17:00:36] 2025-10-08 14:59:26,416 | INFO     | sum of square deviations: 2912836010.0
[2025-10-08 17:00:36] 2025-10-08 14:59:26,425 | INFO     | sum of deviations: 23172037548.0
[2025-10-08 17:00:36] 2025-10-08 14:59:26,425 | INFO     | mean x: 1759928424.0
[2025-10-08 17:00:36] 2025-10-08 14:59:26,425 | INFO     | mean y: 2496159.0426540286
[2025-10-08 17:00:36] 2025-10-08 14:59:26,425 | INFO     | -- intersect: -13997992499.678804
[2025-10-08 17:00:36] 2025-10-08 14:59:26,425 | INFO     | intersect: -13997992499.678804
[2025-10-08 17:00:36] 2025-10-08 14:59:26,426 | INFO     | chi2: 1.5953972590157184
[2025-10-08 17:00:36] 2025-10-08 14:59:26,426 | INFO     | current chi2=1.5953972590157184 (change=-0.05925426073861768 %)
[2025-10-08 17:00:36] 2025-10-08 14:59:26,426 | INFO     | right removable region: 210
[2025-10-08 17:00:36] 2025-10-08 14:59:26,426 | INFO     | sum of square deviations: 3124858590.0
[2025-10-08 17:00:36] 2025-10-08 14:59:26,428 | INFO     | sum of deviations: -28186565270.5
[2025-10-08 17:00:36] 2025-10-08 14:59:26,433 | INFO     | mean x: 1759928881.5
[2025-10-08 17:00:36] 2025-10-08 14:59:26,434 | INFO     | mean y: 2512194.782407407
[2025-10-08 17:00:36] 2025-10-08 14:59:26,434 | INFO     | -- intersect: 15877262639.03781
[2025-10-08 17:00:36] 2025-10-08 14:59:26,434 | INFO     | intersect: 15877262639.03781
[2025-10-08 17:00:36] 2025-10-08 14:59:26,434 | INFO     | chi2: 0.8311082879422411
[2025-10-08 17:00:36] 2025-10-08 14:59:26,434 | INFO     | current chi2=0.8311082879422411 (change=64.81367152261541 %)
[2025-10-08 17:00:36] 2025-10-08 14:59:26,435 | INFO     | sum of square deviations: 2912836010.0
[2025-10-08 17:00:36] 2025-10-08 14:59:26,436 | INFO     | sum of deviations: -31010597022.999992
[2025-10-08 17:00:36] 2025-10-08 14:59:26,436 | INFO     | mean x: 1759929034.0
[2025-10-08 17:00:36] 2025-10-08 14:59:26,437 | INFO     | mean y: 2514192.55450237
[2025-10-08 17:00:36] 2025-10-08 14:59:26,437 | INFO     | -- intersect: 18739047892.04404
[2025-10-08 17:00:36] 2025-10-08 14:59:26,437 | INFO     | intersect: 18739047892.04404
[2025-10-08 17:00:36] 2025-10-08 14:59:26,437 | INFO     | chi2: 0.8073909062113729
[2025-10-08 17:00:36] 2025-10-08 14:59:26,437 | INFO     | current chi2=0.8073909062113729 (change=2.853705356445261 %)
[2025-10-08 17:00:36] 2025-10-08 14:59:26,437 | INFO     | left removable region: 20
[2025-10-08 17:00:36] 2025-10-08 14:59:26,438 | INFO     | sum of square deviations: 2126802667.5
[2025-10-08 17:00:36] 2025-10-08 14:59:26,439 | INFO     | sum of deviations: -13795819719.0
[2025-10-08 17:00:36] 2025-10-08 14:59:26,439 | INFO     | mean x: 1759929003.5
[2025-10-08 17:00:36] 2025-10-08 14:59:26,439 | INFO     | mean y: 2523801.147368421
[2025-10-08 17:00:36] 2025-10-08 14:59:26,440 | INFO     | -- intersect: 11418563296.276184
[2025-10-08 17:00:36] 2025-10-08 14:59:26,440 | INFO     | intersect: 11418563296.276184
[2025-10-08 17:00:36] 2025-10-08 14:59:26,440 | INFO     | chi2: 0.018563689874080483
[2025-10-08 17:00:36] 2025-10-08 14:59:26,440 | INFO     | -- intersect: 11418563296.276184
[2025-10-08 17:00:36] 2025-10-08 14:59:26,440 | INFO     | current memory leak: -6.49 B/s (using 190 data points, chi2=0.02)
[2025-10-08 17:00:36] 2025-10-08 14:59:26,441 | INFO     | could have reported an average CPU frequency of 1999 MHz (10 samples)
[2025-10-08 17:00:36] 2025-10-08 14:59:26,441 | INFO     | ..............................
[2025-10-08 17:00:36] 2025-10-08 14:59:26,441 | INFO     | . Timing measurements:
[2025-10-08 17:00:36] 2025-10-08 14:59:26,442 | INFO     | . get job = 0 s
[2025-10-08 17:00:36] 2025-10-08 14:59:26,442 | INFO     | . initial setup = 2 s
[2025-10-08 17:00:36] 2025-10-08 14:59:26,442 | INFO     | . payload setup = 8 s
[2025-10-08 17:00:36] 2025-10-08 14:59:26,442 | INFO     | . stage-in = 0 s
[2025-10-08 17:00:36] 2025-10-08 14:59:26,442 | INFO     | . payload execution = 13448 s
[2025-10-08 17:00:36] 2025-10-08 14:59:26,442 | INFO     | . stage-out = 4 s
[2025-10-08 17:00:36] 2025-10-08 14:59:26,442 | INFO     | . log creation = 1 s
[2025-10-08 17:00:36] 2025-10-08 14:59:26,442 | INFO     | ..............................
[2025-10-08 17:00:36] 2025-10-08 14:59:26,655 | INFO     | 
[2025-10-08 17:00:36] 2025-10-08 14:59:26,656 | INFO     | job summary report
[2025-10-08 17:00:36] 2025-10-08 14:59:26,656 | INFO     | --------------------------------------------------
[2025-10-08 17:00:36] 2025-10-08 14:59:26,656 | INFO     | PanDA job id: 6835984231
[2025-10-08 17:00:36] 2025-10-08 14:59:26,656 | INFO     | task id: 46676269
[2025-10-08 17:00:36] 2025-10-08 14:59:26,656 | INFO     | errors: (none)
[2025-10-08 17:00:36] 2025-10-08 14:59:26,656 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-08 17:00:36] 2025-10-08 14:59:26,656 | INFO     | pilot state: finished 
[2025-10-08 17:00:36] 2025-10-08 14:59:26,656 | INFO     | transexitcode: 0
[2025-10-08 17:00:36] 2025-10-08 14:59:26,657 | INFO     | exeerrorcode: 0
[2025-10-08 17:00:36] 2025-10-08 14:59:26,657 | INFO     | exeerrordiag: 
[2025-10-08 17:00:36] 2025-10-08 14:59:26,657 | INFO     | exitcode: 0
[2025-10-08 17:00:36] 2025-10-08 14:59:26,657 | INFO     | exitmsg: OK
[2025-10-08 17:00:36] 2025-10-08 14:59:26,657 | INFO     | cpuconsumptiontime: 53943 s
[2025-10-08 17:00:36] 2025-10-08 14:59:26,657 | INFO     | nevents: 400
[2025-10-08 17:00:36] 2025-10-08 14:59:26,657 | INFO     | neventsw: 0
[2025-10-08 17:00:36] 2025-10-08 14:59:26,657 | INFO     | pid: 15809
[2025-10-08 17:00:36] 2025-10-08 14:59:26,657 | INFO     | pgrp: 15809
[2025-10-08 17:00:36] 2025-10-08 14:59:26,657 | INFO     | corecount: 8
[2025-10-08 17:00:36] 2025-10-08 14:59:26,658 | INFO     | event service: False
[2025-10-08 17:00:36] 2025-10-08 14:59:26,658 | INFO     | sizes: {0: 2348681, 1: 2348880, 7: 2349142, 12: 2349170, 13461: 2379027, 13466: 2388025, 13467: 2388209, 13566: 2388403}
[2025-10-08 17:00:36] 2025-10-08 14:59:26,658 | INFO     | --------------------------------------------------
[2025-10-08 17:00:36] 2025-10-08 14:59:26,658 | INFO     | 
[2025-10-08 17:00:36] 2025-10-08 14:59:26,658 | INFO     | executing command: ls -lF /var/lib/boinc/slots/8
[2025-10-08 17:00:36] 2025-10-08 14:59:26,923 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-08 17:00:36] 2025-10-08 14:59:26,923 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-08 17:00:36] 2025-10-08 14:59:26,924 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-08 17:00:36] 2025-10-08 14:59:26,924 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-08 17:00:36] 2025-10-08 14:59:26,924 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-08 17:00:36] 2025-10-08 14:59:26,924 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-08 17:00:36] 2025-10-08 14:59:26,924 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-08 17:00:36] 2025-10-08 14:59:26,924 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-08 17:00:36] 2025-10-08 14:59:26,924 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-08 17:00:36] 2025-10-08 14:59:26,924 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-08 17:00:36] 2025-10-08 14:59:26,924 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-08 17:00:36] 2025-10-08 14:59:26,924 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-08 17:00:36] 2025-10-08 14:59:26,925 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-08 17:00:36] 2025-10-08 14:59:26,925 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-08 17:00:36] 2025-10-08 14:59:26,925 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-08 17:00:36] 2025-10-08 14:59:26,925 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-08 17:00:36] 2025-10-08 14:59:26,925 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-08 17:00:36] 2025-10-08 14:59:26,925 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-08 17:00:36] 2025-10-08 14:59:26,925 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-08 17:00:36] 2025-10-08 14:59:26,925 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-08 17:00:36] 2025-10-08 14:59:26,926 | INFO     | job 6835984231 has completed (purged errors)
[2025-10-08 17:00:36] 2025-10-08 14:59:26,926 | INFO     | overall cleanup function is called
[2025-10-08 17:00:36] 2025-10-08 14:59:27,934 | INFO     | --- collectZombieJob: --- 10, [15809]
[2025-10-08 17:00:36] 2025-10-08 14:59:27,935 | INFO     | zombie collector waiting for pid 15809
[2025-10-08 17:00:36] 2025-10-08 14:59:27,935 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-08 17:00:36] 2025-10-08 14:59:27,935 | INFO     | collected zombie processes
[2025-10-08 17:00:36] 2025-10-08 14:59:27,935 | INFO     | will attempt to kill all subprocesses of pid=15809
[2025-10-08 17:00:36] 2025-10-08 14:59:28,034 | INFO     | process IDs to be killed: [15809] (in reverse order)
[2025-10-08 17:00:36] 2025-10-08 14:59:28,708 | WARNING  | found no corresponding commands to process id(s)
[2025-10-08 17:00:36] 2025-10-08 14:59:28,708 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-08 17:00:36] 2025-10-08 14:59:28,712 | INFO     | did not find any defunct processes belonging to 15809
[2025-10-08 17:00:36] 2025-10-08 14:59:28,714 | INFO     | did not find any defunct processes belonging to 15809
[2025-10-08 17:00:36] 2025-10-08 14:59:28,715 | INFO     | ready for new job
[2025-10-08 17:00:36] 2025-10-08 14:59:28,715 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-08 17:00:36] 2025-10-08 14:59:28,717 | INFO     | ***************************************
[2025-10-08 17:00:36] 2025-10-08 14:59:28,717 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-08 17:00:36] 2025-10-08 14:59:28,717 | INFO     | ***************************************
[2025-10-08 17:00:36] 2025-10-08 14:59:28,717 | INFO     | 
[2025-10-08 17:00:36] 2025-10-08 14:59:28,718 | INFO     | pilot is running in a VM
[2025-10-08 17:00:36] 2025-10-08 14:59:28,718 | INFO     | architecture information:
[2025-10-08 17:00:36] 2025-10-08 14:59:28,722 | INFO     | executing command: cat /etc/os-release
[2025-10-08 17:00:36] 2025-10-08 14:59:29,040 | INFO     | cat /etc/os-release:
[2025-10-08 17:00:36] NAME="CentOS Linux"
[2025-10-08 17:00:36] VERSION="7 (Core)"
[2025-10-08 17:00:36] ID="centos"
[2025-10-08 17:00:36] ID_LIKE="rhel fedora"
[2025-10-08 17:00:36] VERSION_ID="7"
[2025-10-08 17:00:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-08 17:00:36] ANSI_COLOR="0;31"
[2025-10-08 17:00:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-08 17:00:36] HOME_URL="https://www.centos.org/"
[2025-10-08 17:00:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-08 17:00:36] 
[2025-10-08 17:00:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-08 17:00:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-08 17:00:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-08 17:00:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-08 17:00:36] 
[2025-10-08 17:00:36] 2025-10-08 14:59:29,040 | INFO     | ***************************************
[2025-10-08 17:00:36] 2025-10-08 14:59:29,544 | INFO     | executing command: df -mP /var/lib/boinc/slots/8
[2025-10-08 17:00:36] 2025-10-08 14:59:29,805 | INFO     | sufficient remaining disk space (496475570176 B)
[2025-10-08 17:00:36] 2025-10-08 14:59:29,805 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-08 17:00:36] 2025-10-08 14:59:29,806 | INFO     | current server update state: UPDATING_FINAL
[2025-10-08 17:00:36] 2025-10-08 14:59:29,806 | INFO     | update_server=False
[2025-10-08 17:00:36] 2025-10-08 14:59:29,806 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-08 17:00:36] 2025-10-08 14:59:30,349 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-08 17:00:36] 2025-10-08 14:59:30,561 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-08 17:00:36] 2025-10-08 14:59:30,562 | INFO     | aborting loop
[2025-10-08 17:00:36] 2025-10-08 14:59:30,648 | INFO     | all data control threads have been joined
[2025-10-08 17:00:36] 2025-10-08 14:59:30,811 | INFO     | [job] retrieve thread has finished
[2025-10-08 17:00:36] 2025-10-08 14:59:30,945 | INFO     | [payload] validate_post thread has finished
[2025-10-08 17:00:36] 2025-10-08 14:59:31,160 | INFO     | all payload control threads have been joined
[2025-10-08 17:00:36] 2025-10-08 14:59:31,381 | INFO     | [payload] execute_payloads thread has finished
[2025-10-08 17:00:36] 2025-10-08 14:59:31,448 | INFO     | [job] create_data_payload thread has finished
[2025-10-08 17:00:36] 2025-10-08 14:59:31,497 | INFO     | all job control threads have been joined
[2025-10-08 17:00:36] 2025-10-08 14:59:31,566 | INFO     | [job] job monitor thread has finished
[2025-10-08 17:00:36] 2025-10-08 14:59:31,607 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-08 17:00:36] 2025-10-08 14:59:31,625 | INFO     | [job] validate thread has finished
[2025-10-08 17:00:36] 2025-10-08 14:59:31,654 | INFO     | [data] control thread has finished
[2025-10-08 17:00:36] 2025-10-08 14:59:31,664 | INFO     | [payload] validate_pre thread has finished
[2025-10-08 17:00:36] 2025-10-08 14:59:31,889 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-08 17:00:36] 2025-10-08 14:59:32,166 | INFO     | [payload] control thread has finished
[2025-10-08 17:00:36] 2025-10-08 14:59:32,262 | INFO     | [payload] failed_post thread has finished
[2025-10-08 17:00:36] 2025-10-08 14:59:32,312 | INFO     | [data] copytool_in thread has finished
[2025-10-08 17:00:36] 2025-10-08 14:59:32,356 | INFO     | [data] copytool_out thread has finished
[2025-10-08 17:00:36] 2025-10-08 14:59:32,503 | INFO     | [job] control thread has finished
[2025-10-08 17:00:36] 2025-10-08 14:59:32,613 | INFO     | [job] queue monitor thread has finished
[2025-10-08 17:00:36] 2025-10-08 14:59:32,816 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-08 17:00:36] 2025-10-08 14:59:36,825 | INFO     | [data] queue_monitor thread has finished
[2025-10-08 17:00:36] 2025-10-08 14:59:58,216 | INFO     | PID=9347 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-08 17:00:36] 2025-10-08 14:59:58,216 | INFO     | .. there are 9 such processes running
[2025-10-08 17:00:36] 2025-10-08 14:59:58,216 | INFO     | found 0 job(s) in 20 queues
[2025-10-08 17:00:36] 2025-10-08 14:59:58,217 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-08 17:00:36] 2025-10-08 14:59:58,217 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-08 17:00:36] 2025-10-08 15:00:25,611 | INFO     | [monitor] cgroup control has ended
[2025-10-08 17:00:36] 2025-10-08 15:00:26,285 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140049272076096)>', '<ExcThread(monitor, started 140048540362496)>']
[2025-10-08 17:00:36] 2025-10-08 15:00:26,385 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-08 17:00:36] 2025-10-08 15:00:26,385 | INFO     | [monitor] control thread has ended
[2025-10-08 17:00:36] 2025-10-08 15:00:31,311 | INFO     | all workflow threads have been joined
[2025-10-08 17:00:36] 2025-10-08 15:00:31,312 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-08 17:00:36] 2025-10-08 15:00:31,312 | INFO     | traces error code: 0
[2025-10-08 17:00:36] 2025-10-08 15:00:31,312 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-08 17:00:36] 2025-10-08 15:00:31,740 [wrapper] ==== pilot stdout END ====
[2025-10-08 17:00:36] 2025-10-08 15:00:31,826 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-08 17:00:36] 2025-10-08 15:00:31,924 [wrapper] pilotpid: 9347
[2025-10-08 17:00:36] 2025-10-08 15:00:31,993 [wrapper] Pilot exit status: 0
[2025-10-08 17:00:36] 2025-10-08 15:00:32,478 [wrapper] pandaids: 6835984231
[2025-10-08 17:00:36] 2025-10-08 15:00:33,477 [wrapper] cleanup supervisor_pilot 16227 9348
[2025-10-08 17:00:36] 2025-10-08 15:00:33,538 [wrapper] Test setup, not cleaning
[2025-10-08 17:00:36] 2025-10-08 15:00:33,593 [wrapper] apfmon messages muted
[2025-10-08 17:00:36] 2025-10-08 15:00:33,642 [wrapper] ==== wrapper stdout END ====
[2025-10-08 17:00:36] 2025-10-08 15:00:33,690 [wrapper] ==== wrapper stderr END ====
[2025-10-08 17:00:36]  *** Error codes and diagnostics ***
[2025-10-08 17:00:36]     "exeErrorCode": 0,
[2025-10-08 17:00:36]     "exeErrorDiag": "",
[2025-10-08 17:00:36]     "pilotErrorCode": 0,
[2025-10-08 17:00:36]     "pilotErrorDiag": "",
[2025-10-08 17:00:36]  *** Listing of results directory ***
[2025-10-08 17:00:36] total 414432
[2025-10-08 17:00:36] -rw-r--r--. 1 boinc boinc    557409 Oct  8 12:04 pilot3.tar.gz
[2025-10-08 17:00:36] -rwx------. 1 boinc boinc     36292 Oct  8 12:12 runpilot2-wrapper.sh
[2025-10-08 17:00:36] -rw-r--r--. 1 boinc boinc      5112 Oct  8 12:12 queuedata.json
[2025-10-08 17:00:36] -rw-r--r--. 1 boinc boinc       100 Oct  8 13:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-08 17:00:36] -rwxr-xr-x. 1 boinc boinc      7986 Oct  8 13:12 run_atlas
[2025-10-08 17:00:36] -rw-r--r--. 1 boinc boinc       105 Oct  8 13:12 job.xml
[2025-10-08 17:00:36] -rw-r--r--. 2 boinc boinc 222056211 Oct  8 13:12 EVNT.46676267._000218.pool.root.1
[2025-10-08 17:00:36] -rw-r--r--. 2 boinc boinc    569681 Oct  8 13:12 input.tar.gz
[2025-10-08 17:00:36] -rw-r--r--. 1 boinc boinc      6391 Oct  8 13:12 init_data.xml
[2025-10-08 17:00:36] -rw-r--r--. 2 boinc boinc     15120 Oct  8 13:12 start_atlas.sh
[2025-10-08 17:00:36] drwxrwx--x. 2 boinc boinc        68 Oct  8 13:12 shared
[2025-10-08 17:00:36] -rw-r--r--. 1 boinc boinc         0 Oct  8 13:12 boinc_lockfile
[2025-10-08 17:00:36] -rw-r--r--. 1 boinc boinc      2548 Oct  8 13:12 pandaJob.out
[2025-10-08 17:00:36] -rw-------. 1 boinc boinc    979793 Oct  8 13:13 agis_schedconf.cvmfs.json
[2025-10-08 17:00:36] drwx------. 5 boinc boinc      4096 Oct  8 13:13 pilot3
[2025-10-08 17:00:36] -rw-------. 1 boinc boinc 193841404 Oct  8 16:56 HITS.46676269._005426.pool.root.1
[2025-10-08 17:00:36] -rw-r--r--. 1 boinc boinc       531 Oct  8 16:56 boinc_task_state.xml
[2025-10-08 17:00:36] -rw-------. 1 boinc boinc      1020 Oct  8 16:57 memory_monitor_summary.json
[2025-10-08 17:00:36] -rw-------. 1 boinc boinc   1560401 Oct  8 16:57 agis_ddmendpoints.agis.ALL.json
[2025-10-08 17:00:36] -rw-------. 1 boinc boinc    457446 Oct  8 16:57 log.46676269._005426.job.log.tgz.1
[2025-10-08 17:00:36] -rw-------. 1 boinc boinc        95 Oct  8 16:59 pilot_heartbeat.json
[2025-10-08 17:00:36] -rw-------. 1 boinc boinc      7782 Oct  8 16:59 heartbeat.json
[2025-10-08 17:00:36] -rw-r--r--. 1 boinc boinc      8192 Oct  8 17:00 boinc_mmap_file
[2025-10-08 17:00:36] -rw-r--r--. 1 boinc boinc        28 Oct  8 17:00 wrapper_checkpoint.txt
[2025-10-08 17:00:36] -rw-------. 1 boinc boinc      4883 Oct  8 17:00 pilotlog.txt
[2025-10-08 17:00:36] -rw-------. 1 boinc boinc   1840373 Oct  8 17:00 log.46676269._005426.job.log.1
[2025-10-08 17:00:36] -rw-------. 1 boinc boinc       357 Oct  8 17:00 output.list
[2025-10-08 17:00:36] -rw-r--r--. 1 boinc boinc       620 Oct  8 17:00 runtime_log
[2025-10-08 17:00:36] -rw-------. 1 boinc boinc   2314240 Oct  8 17:00 result.tar.gz
[2025-10-08 17:00:36] -rw-r--r--. 1 boinc boinc      8703 Oct  8 17:00 runtime_log.err
[2025-10-08 17:00:36] -rw-------. 1 boinc boinc       657 Oct  8 17:00 9TzNDmoKgQ8n9Rq4apOajLDm4fhM0noT9bVof3QYDmgYMMDm0RrMam.diag
[2025-10-08 17:00:36] -rw-r--r--. 1 boinc boinc     20560 Oct  8 17:00 stderr.txt
[2025-10-08 17:00:36] HITS file was successfully produced:
[2025-10-08 17:00:36] -rw-------. 1 boinc boinc 193841404 Oct  8 16:56 shared/HITS.pool.root.1
[2025-10-08 17:00:36]  *** Contents of shared directory: ***
[2025-10-08 17:00:36] total 408988
[2025-10-08 17:00:36] -rw-r--r--. 2 boinc boinc 222056211 Oct  8 13:12 ATLAS.root_0
[2025-10-08 17:00:36] -rw-r--r--. 2 boinc boinc    569681 Oct  8 13:12 input.tar.gz
[2025-10-08 17:00:36] -rw-r--r--. 2 boinc boinc     15120 Oct  8 13:12 start_atlas.sh
[2025-10-08 17:00:36] -rw-------. 1 boinc boinc 193841404 Oct  8 16:56 HITS.pool.root.1
[2025-10-08 17:00:36] -rw-------. 1 boinc boinc   2314240 Oct  8 17:00 result.tar.gz
17:00:37 (5336): run_atlas exited; CPU time 54100.193443
17:00:37 (5336): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN