Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:02:23 (409446): wrapper (7.7.26015): starting
04:02:23 (409446): wrapper: running run_atlas (--nthreads 12)
[2025-10-08 04:02:23] Arguments: --nthreads 12
[2025-10-08 04:02:23] Threads: 12
[2025-10-08 04:02:23] Checking for CVMFS
[2025-10-08 04:02:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 04:02:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 04:02:23] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 04:02:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 04:02:24] 2.11.3.0 3020 18110 224616 151469 0 541 41808468 45568000 18468 130560 0 245472182 99.896 87334371 25056 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-10-08 04:02:24] CVMFS is ok
[2025-10-08 04:02:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-08 04:02:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-08 04:02:24] Further information can be found at the LHC@home message board.
[2025-10-08 04:02:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 04:02:24] Checking for apptainer binary...
[2025-10-08 04:02:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 04:02:24] Running /usr/bin/apptainer --version
[2025-10-08 04:02:26] apptainer version 1.4.1-1.el9
[2025-10-08 04:02:26] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 04:02:26] wns0169.triumf.lcg
[2025-10-08 04:02:26] apptainer works
[2025-10-08 04:02:26] Set ATHENA_PROC_NUMBER=12
[2025-10-08 04:02:26] Set ATHENA_CORE_NUMBER=12
[2025-10-08 04:02:26] Starting ATLAS job with PandaID=6835984067
[2025-10-08 04:02:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-08 04:06:55]  *** The last 200 lines of the pilot log: ***
[2025-10-08 04:06:55] 2025-10-08 11:05:57,570 | INFO     | will not add max space = 0 B to job metrics
[2025-10-08 04:06:55] 2025-10-08 11:05:57,571 | WARNING  | wrong length of table data, x=[1759921406.0], y=[1576.0] (must be same and length>=4)
[2025-10-08 04:06:55] 2025-10-08 11:05:57,571 | INFO     | could have reported an average CPU frequency of 2855 MHz (4 samples)
[2025-10-08 04:06:55] 2025-10-08 11:05:57,571 | INFO     | ..............................
[2025-10-08 04:06:55] 2025-10-08 11:05:57,571 | INFO     | . Timing measurements:
[2025-10-08 04:06:55] 2025-10-08 11:05:57,571 | INFO     | . get job = 0 s
[2025-10-08 04:06:55] 2025-10-08 11:05:57,571 | INFO     | . initial setup = 3 s
[2025-10-08 04:06:55] 2025-10-08 11:05:57,571 | INFO     | . payload setup = 7 s
[2025-10-08 04:06:55] 2025-10-08 11:05:57,571 | INFO     | . stage-in = 0 s
[2025-10-08 04:06:55] 2025-10-08 11:05:57,571 | INFO     | . payload execution = 32 s
[2025-10-08 04:06:55] 2025-10-08 11:05:57,571 | INFO     | . stage-out = 0 s
[2025-10-08 04:06:55] 2025-10-08 11:05:57,571 | INFO     | . log creation = 0 s
[2025-10-08 04:06:55] 2025-10-08 11:05:57,571 | INFO     | ..............................
[2025-10-08 04:06:55] 2025-10-08 11:05:57,572 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-08 04:06:55] 2025-10-08 11:05:57,572 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6835984067/pilotlog.txt
[2025-10-08 04:06:55] 2025-10-08 11:05:57,584 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-08 04:06:55] - Log from pilotlog.txt -
[2025-10-08 04:06:55] 2025-10-08 11:05:57,570 | INFO     | extracted standard memory fields from prmon json
[2025-10-08 04:06:55] 2025-10-08 11:05:57,570 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-08 04:06:55] 2025-10-08 11:05:57,570 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-08 04:06:55] 2025-10-08 11:05:57,570 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-08 04:06:55] 2025-10-08 11:05:57,570 | WARNING  | found no stored workdir sizes
[2025-10-08 04:06:55] 2025-10-08 11:05:57,570 | INFO     | will not add max space = 0 B to job metrics
[2025-10-08 04:06:55] 2025-10-08 11:05:57,571 | WARNING  | wrong length of table data, x=[1759921406.0], y=[1576.0] (must be same and length>=4)
[2025-10-08 04:06:55] 2025-10-08 11:05:57,571 | INFO     | could have reported an average CPU frequency of 2855 MHz (4 samples)
[2025-10-08 04:06:55] 2025-10-08 11:05:57,571 | INFO     | ..............................
[2025-10-08 04:06:55] 2025-10-08 11:05:57,571 | INFO     | . Timing measurements:
[2025-10-08 04:06:55] 2025-10-08 11:05:57,571 | INFO     | . get job = 0 s
[2025-10-08 04:06:55] 2025-10-08 11:05:57,571 | INFO     | . initial setup = 3 s
[2025-10-08 04:06:55] 2025-10-08 11:05:57,571 | INFO     | . payload setup = 7 s
[2025-10-08 04:06:55] 2025-10-08 11:05:57,571 | INFO     | . stage-in = 0 s
[2025-10-08 04:06:55] 2025-10-08 11:05:57,571 | INFO     | . payload execution = 32 s
[2025-10-08 04:06:55] 2025-10-08 11:05:57,571 | INFO     | . stage-out = 0 s
[2025-10-08 04:06:55] 2025-10-08 11:05:57,571 | INFO     | . log creation = 0 s
[2025-10-08 04:06:55] 2025-10-08 11:05:57,571 | INFO     | ..............................
[2025-10-08 04:06:55] 2025-10-08 11:05:57,572 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-08 04:06:55] 2025-10-08 11:05:57,572 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6835984067/pilotlog.txt
[2025-10-08 04:06:55] 2025-10-08 11:05:57,584 | WARNING  | 
[2025-10-08 04:06:55] [begin log extracts]
[2025-10-08 04:06:55] - Log from pilotlog.txt -
[2025-10-08 04:06:55] 2025-10-08 11:05:57,570 | INFO     | extracted standard memory fields from prmon json
[2025-10-08 04:06:55] 2025-10-08 11:05:57,570 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-08 04:06:55] 2025-10-08 11:05:57,570 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-08 04:06:55] 2025-10-08 11:05:57,570 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-08 04:06:55] 2025-10-08 11:05:57,570 | WARNING  | found no stored workdir sizes
[2025-10-08 04:06:55] 2025-10-08 11:05:57,570 | INFO     | will not add max space = 0 B to job metrics
[2025-10-08 04:06:55] 2025-10-08 11:05:57,571 | WARNING  | wrong length of table data, x=[1759921406.0], y=[1576.0] (must be same and length>=4)
[2025-10-08 04:06:55] 2025-10-08 11:05:57,571 | INFO     | could have reported an average CPU frequency of 2855 MHz (4 samples)
[2025-10-08 04:06:55] 2025-10-08 11:05:57,571 | INFO     | ..............................
[2025-10-08 04:06:55] 2025-10-08 11:05:57,571 | INFO     | . Timing measurements:
[2025-10-08 04:06:55] 2025-10-08 11:05:57,571 | INFO     | . get job = 0 s
[2025-10-08 04:06:55] 2025-10-08 11:05:57,571 | INFO     | . initial setup = 3 s
[2025-10-08 04:06:55] 2025-10-08 11:05:57,571 | INFO     | . payload setup = 7 s
[2025-10-08 04:06:55] 2025-10-08 11:05:57,571 | INFO     | . stage-in = 0 s
[2025-10-08 04:06:55] 2025-10-08 11:05:57,571 | INFO     | . payload execution = 32 s
[2025-10-08 04:06:55] 2025-10-08 11:05:57,571 | INFO     | . stage-out = 0 s
[2025-10-08 04:06:55] 2025-10-08 11:05:57,571 | INFO     | . log creation = 0 s
[2025-10-08 04:06:55] 2025-10-08 11:05:57,571 | INFO     | ..............................
[2025-10-08 04:06:55] 2025-10-08 11:05:57,572 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-08 04:06:55] 2025-10-08 11:05:57,572 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6835984067/pilotlog.txt
[2025-10-08 04:06:55] [end log extracts]
[2025-10-08 04:06:55] 2025-10-08 11:05:57,584 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-08 04:06:55] 2025-10-08 11:05:57,585 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-10-08 04:06:55] 2025-10-08 11:05:57,672 | INFO     | 
[2025-10-08 04:06:55] 2025-10-08 11:05:57,672 | INFO     | job summary report
[2025-10-08 04:06:55] 2025-10-08 11:05:57,672 | INFO     | --------------------------------------------------
[2025-10-08 04:06:55] 2025-10-08 11:05:57,673 | INFO     | PanDA job id: 6835984067
[2025-10-08 04:06:55] 2025-10-08 11:05:57,673 | INFO     | task id: 46676269
[2025-10-08 04:06:55] 2025-10-08 11:05:57,673 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-08 04:03:42,916 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-08 04:06:55] 2025-10-08 11:05:57,673 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-08 04:06:55] 2025-10-08 11:05:57,673 | INFO     | pilot state: failed 
[2025-10-08 04:06:55] 2025-10-08 11:05:57,673 | INFO     | transexitcode: 65
[2025-10-08 04:06:55] 2025-10-08 11:05:57,673 | INFO     | exeerrorcode: 65
[2025-10-08 04:06:55] 2025-10-08 11:05:57,673 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (1)
[2025-10-08 04:06:55] 2025-10-08 11:05:57,673 | INFO     | exitcode: 65
[2025-10-08 04:06:55] 2025-10-08 11:05:57,673 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (1)
[2025-10-08 04:06:55] 2025-10-08 11:05:57,673 | INFO     | cpuconsumptiontime: 14 s
[2025-10-08 04:06:55] 2025-10-08 11:05:57,673 | INFO     | nevents: 0
[2025-10-08 04:06:55] 2025-10-08 11:05:57,673 | INFO     | neventsw: 0
[2025-10-08 04:06:55] 2025-10-08 11:05:57,673 | INFO     | pid: 420009
[2025-10-08 04:06:55] 2025-10-08 11:05:57,673 | INFO     | pgrp: 420009
[2025-10-08 04:06:55] 2025-10-08 11:05:57,673 | INFO     | corecount: 12
[2025-10-08 04:06:55] 2025-10-08 11:05:57,673 | INFO     | event service: False
[2025-10-08 04:06:55] 2025-10-08 11:05:57,673 | INFO     | sizes: {0: 2348849, 7: 2349111, 11: 2349139, 43: 2372393, 44: 2376685, 47: 2376713, 170: 2377035}
[2025-10-08 04:06:55] 2025-10-08 11:05:57,673 | INFO     | --------------------------------------------------
[2025-10-08 04:06:55] 2025-10-08 11:05:57,673 | INFO     | 
[2025-10-08 04:06:55] 2025-10-08 11:05:57,673 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-10-08 04:06:55] 2025-10-08 11:05:57,694 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-08 04:06:55] 2025-10-08 11:05:57,694 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-08 04:06:55] 2025-10-08 11:05:57,694 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-08 04:06:55] 2025-10-08 11:05:57,694 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-08 04:06:55] 2025-10-08 11:05:57,694 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-08 04:06:55] 2025-10-08 11:05:57,694 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-08 04:06:55] 2025-10-08 11:05:57,694 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-08 04:06:55] 2025-10-08 11:05:57,694 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-08 04:06:55] 2025-10-08 11:05:57,695 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-08 04:06:55] 2025-10-08 11:05:57,695 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-08 04:06:55] 2025-10-08 11:05:57,695 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-08 04:06:55] 2025-10-08 11:05:57,695 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-08 04:06:55] 2025-10-08 11:05:57,695 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-08 04:06:55] 2025-10-08 11:05:57,695 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-08 04:06:55] 2025-10-08 11:05:57,695 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-08 04:06:55] 2025-10-08 11:05:57,695 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-08 04:06:55] 2025-10-08 11:05:57,695 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-08 04:06:55] 2025-10-08 11:05:57,695 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-08 04:06:55] 2025-10-08 11:05:57,695 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-08 04:06:55] 2025-10-08 11:05:57,695 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-08 04:06:55] 2025-10-08 11:05:57,695 | INFO     | job 6835984067 has completed (purged errors)
[2025-10-08 04:06:55] 2025-10-08 11:05:57,695 | INFO     | overall cleanup function is called
[2025-10-08 04:06:55] 2025-10-08 11:05:58,703 | INFO     | --- collectZombieJob: --- 10, [420009]
[2025-10-08 04:06:55] 2025-10-08 11:05:58,703 | INFO     | zombie collector waiting for pid 420009
[2025-10-08 04:06:55] 2025-10-08 11:05:58,703 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-08 04:06:55] 2025-10-08 11:05:58,703 | INFO     | collected zombie processes
[2025-10-08 04:06:55] 2025-10-08 11:05:58,704 | INFO     | will attempt to kill all subprocesses of pid=420009
[2025-10-08 04:06:55] 2025-10-08 11:05:58,884 | INFO     | process IDs to be killed: [420009] (in reverse order)
[2025-10-08 04:06:55] 2025-10-08 11:05:58,936 | WARNING  | found no corresponding commands to process id(s)
[2025-10-08 04:06:55] 2025-10-08 11:05:58,937 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-08 04:06:55] 2025-10-08 11:05:58,942 | INFO     | did not find any defunct processes belonging to 420009
[2025-10-08 04:06:55] 2025-10-08 11:05:58,947 | INFO     | did not find any defunct processes belonging to 420009
[2025-10-08 04:06:55] 2025-10-08 11:05:58,947 | INFO     | ready for new job
[2025-10-08 04:06:55] 2025-10-08 11:05:58,947 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-08 04:06:55] 2025-10-08 11:05:58,949 | INFO     | ***************************************
[2025-10-08 04:06:55] 2025-10-08 11:05:58,949 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-08 04:06:55] 2025-10-08 11:05:58,949 | INFO     | ***************************************
[2025-10-08 04:06:55] 2025-10-08 11:05:58,949 | INFO     | 
[2025-10-08 04:06:55] 2025-10-08 11:05:58,950 | INFO     | architecture information:
[2025-10-08 04:06:55] 2025-10-08 11:05:58,951 | INFO     | executing command: cat /etc/os-release
[2025-10-08 04:06:55] 2025-10-08 11:05:58,978 | INFO     | cat /etc/os-release:
[2025-10-08 04:06:55] NAME="CentOS Linux"
[2025-10-08 04:06:55] VERSION="7 (Core)"
[2025-10-08 04:06:55] ID="centos"
[2025-10-08 04:06:55] ID_LIKE="rhel fedora"
[2025-10-08 04:06:55] VERSION_ID="7"
[2025-10-08 04:06:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-08 04:06:55] ANSI_COLOR="0;31"
[2025-10-08 04:06:55] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-08 04:06:55] HOME_URL="https://www.centos.org/"
[2025-10-08 04:06:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-08 04:06:55] 
[2025-10-08 04:06:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-08 04:06:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-08 04:06:55] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-08 04:06:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-08 04:06:55] 
[2025-10-08 04:06:55] 2025-10-08 11:05:58,978 | INFO     | ***************************************
[2025-10-08 04:06:55] 2025-10-08 11:05:59,482 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-10-08 04:06:55] 2025-10-08 11:05:59,506 | INFO     | sufficient remaining disk space (2371441655808 B)
[2025-10-08 04:06:55] 2025-10-08 11:05:59,506 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-08 04:06:55] 2025-10-08 11:05:59,506 | INFO     | current server update state: UPDATING_FINAL
[2025-10-08 04:06:55] 2025-10-08 11:05:59,507 | INFO     | update_server=False
[2025-10-08 04:06:55] 2025-10-08 11:05:59,507 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-08 04:06:55] 2025-10-08 11:05:59,507 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-08 04:06:55] 2025-10-08 11:05:59,567 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-08 04:06:55] 2025-10-08 11:05:59,567 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-08 04:06:55] 2025-10-08 11:05:59,574 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-08 04:06:55] 2025-10-08 11:05:59,574 | INFO     | will abort loop
[2025-10-08 04:06:55] 2025-10-08 11:05:59,587 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-08 04:06:55] 2025-10-08 11:05:59,888 | INFO     | all job control threads have been joined
[2025-10-08 04:06:55] 2025-10-08 11:06:00,107 | INFO     | all data control threads have been joined
[2025-10-08 04:06:55] 2025-10-08 11:06:00,138 | INFO     | all payload control threads have been joined
[2025-10-08 04:06:55] 2025-10-08 11:06:00,512 | INFO     | [job] retrieve thread has finished
[2025-10-08 04:06:55] 2025-10-08 11:06:00,513 | INFO     | [job] queue monitor thread has finished
[2025-10-08 04:06:55] 2025-10-08 11:06:00,580 | INFO     | [job] job monitor thread has finished
[2025-10-08 04:06:55] 2025-10-08 11:06:00,658 | INFO     | [payload] validate_post thread has finished
[2025-10-08 04:06:55] 2025-10-08 11:06:00,872 | INFO     | [payload] execute_payloads thread has finished
[2025-10-08 04:06:55] 2025-10-08 11:06:00,894 | INFO     | [job] control thread has finished
[2025-10-08 04:06:55] 2025-10-08 11:06:00,910 | INFO     | [data] copytool_in thread has finished
[2025-10-08 04:06:55] 2025-10-08 11:06:01,112 | INFO     | [data] control thread has finished
[2025-10-08 04:06:55] 2025-10-08 11:06:01,144 | INFO     | [payload] control thread has finished
[2025-10-08 04:06:55] 2025-10-08 11:06:01,324 | INFO     | [job] validate thread has finished
[2025-10-08 04:06:55] 2025-10-08 11:06:01,443 | INFO     | [job] create_data_payload thread has finished
[2025-10-08 04:06:55] 2025-10-08 11:06:01,568 | INFO     | [payload] validate_pre thread has finished
[2025-10-08 04:06:55] 2025-10-08 11:06:01,590 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-08 04:06:55] 2025-10-08 11:06:01,596 | INFO     | [data] copytool_out thread has finished
[2025-10-08 04:06:55] 2025-10-08 11:06:01,725 | INFO     | [payload] failed_post thread has finished
[2025-10-08 04:06:55] 2025-10-08 11:06:02,185 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-08 04:06:55] 2025-10-08 11:06:06,192 | INFO     | [data] queue_monitor thread has finished
[2025-10-08 04:06:55] 2025-10-08 11:06:29,640 | INFO     | PID=413385 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-08 04:06:55] 2025-10-08 11:06:29,640 | INFO     | .. there are 21 such processes running
[2025-10-08 04:06:55] 2025-10-08 11:06:29,640 | INFO     | found 0 job(s) in 20 queues
[2025-10-08 04:06:55] 2025-10-08 11:06:29,640 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-08 04:06:55] 2025-10-08 11:06:29,640 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-08 04:06:55] 2025-10-08 11:06:48,825 | INFO     | [monitor] cgroup control has ended
[2025-10-08 04:06:55] 2025-10-08 11:06:50,126 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140200071620416)>', '<ExcThread(monitor, started 140199367517952)>']
[2025-10-08 04:06:55] 2025-10-08 11:06:50,787 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-08 04:06:55] 2025-10-08 11:06:50,787 | INFO     | [monitor] control thread has ended
[2025-10-08 04:06:55] 2025-10-08 11:06:55,152 | INFO     | all workflow threads have been joined
[2025-10-08 04:06:55] 2025-10-08 11:06:55,152 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-08 04:06:55] 2025-10-08 11:06:55,153 | INFO     | traces error code: 0
[2025-10-08 04:06:55] 2025-10-08 11:06:55,153 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-08 04:06:55] 2025-10-08 11:06:55,417 [wrapper] ==== pilot stdout END ====
[2025-10-08 04:06:55] 2025-10-08 11:06:55,430 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-08 04:06:55] 2025-10-08 11:06:55,449 [wrapper] pilotpid: 413385
[2025-10-08 04:06:55] 2025-10-08 11:06:55,459 [wrapper] Pilot exit status: 0
[2025-10-08 04:06:55] 2025-10-08 11:06:55,525 [wrapper] pandaids: 6835984067
[2025-10-08 04:06:55] 2025-10-08 11:06:55,558 [wrapper] cleanup supervisor_pilot  413391 413386
[2025-10-08 04:06:55] 2025-10-08 11:06:55,560 [wrapper] Test setup, not cleaning
[2025-10-08 04:06:55] 2025-10-08 11:06:55,571 [wrapper] apfmon messages muted
[2025-10-08 04:06:55] 2025-10-08 11:06:55,580 [wrapper] ==== wrapper stdout END ====
[2025-10-08 04:06:55] 2025-10-08 11:06:55,595 [wrapper] ==== wrapper stderr END ====
[2025-10-08 04:06:55]  *** Error codes and diagnostics ***
[2025-10-08 04:06:55]     "exeErrorCode": 65,
[2025-10-08 04:06:55]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1)",
[2025-10-08 04:06:55]     "pilotErrorCode": 1305,
[2025-10-08 04:06:55]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1)",
[2025-10-08 04:06:55]  *** Listing of results directory ***
[2025-10-08 04:06:55] total 223264
[2025-10-08 04:06:55] -rw-r--r--. 1 boinc boinc    557409 Oct  8 03:04 pilot3.tar.gz
[2025-10-08 04:06:55] -rwx------. 1 boinc boinc     36292 Oct  8 03:07 runpilot2-wrapper.sh
[2025-10-08 04:06:55] -rw-r--r--. 1 boinc boinc      5112 Oct  8 03:07 queuedata.json
[2025-10-08 04:06:55] -rw-r--r--. 1 boinc boinc       100 Oct  8 04:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-08 04:06:55] -rwxr-xr-x. 1 boinc boinc      7986 Oct  8 04:02 run_atlas
[2025-10-08 04:06:55] -rw-r--r--. 1 boinc boinc       105 Oct  8 04:02 job.xml
[2025-10-08 04:06:55] -rw-r--r--. 1 boinc boinc      6627 Oct  8 04:02 init_data.xml
[2025-10-08 04:06:55] -rw-r--r--. 2 boinc boinc 224509700 Oct  8 04:02 EVNT.46676267._000210.pool.root.1
[2025-10-08 04:06:55] -rw-r--r--. 2 boinc boinc     15120 Oct  8 04:02 start_atlas.sh
[2025-10-08 04:06:55] drwxrwx--x. 2 boinc boinc      4096 Oct  8 04:02 shared
[2025-10-08 04:06:55] -rw-r--r--. 2 boinc boinc    569676 Oct  8 04:02 input.tar.gz
[2025-10-08 04:06:55] -rw-r--r--. 1 boinc boinc         0 Oct  8 04:02 boinc_lockfile
[2025-10-08 04:06:55] -rw-r--r--. 1 boinc boinc      2548 Oct  8 04:02 pandaJob.out
[2025-10-08 04:06:55] -rw-------. 1 boinc boinc    979793 Oct  8 04:02 agis_schedconf.cvmfs.json
[2025-10-08 04:06:55] -rw-------. 1 boinc boinc   1560401 Oct  8 04:02 agis_ddmendpoints.agis.ALL.json
[2025-10-08 04:06:55] drwx------. 5 boinc boinc      4096 Oct  8 04:02 pilot3
[2025-10-08 04:06:55] -rw-r--r--. 1 boinc boinc       522 Oct  8 04:03 boinc_task_state.xml
[2025-10-08 04:06:55] -rw-------. 1 boinc boinc       974 Oct  8 04:03 memory_monitor_summary.json
[2025-10-08 04:06:55] -rw-------. 1 boinc boinc     21112 Oct  8 04:03 log.46676269._005263.job.log.tgz.1
[2025-10-08 04:06:55] -rw-------. 1 boinc boinc        95 Oct  8 04:05 pilot_heartbeat.json
[2025-10-08 04:06:55] -rw-------. 1 boinc boinc      8410 Oct  8 04:05 heartbeat.json
[2025-10-08 04:06:55] -rw-r--r--. 1 boinc boinc      8192 Oct  8 04:06 boinc_mmap_file
[2025-10-08 04:06:55] -rw-------. 1 boinc boinc      5008 Oct  8 04:06 pilotlog.txt
[2025-10-08 04:06:55] -rw-------. 1 boinc boinc     84713 Oct  8 04:06 log.46676269._005263.job.log.1
[2025-10-08 04:06:55] -rw-r--r--. 1 boinc boinc        22 Oct  8 04:06 wrapper_checkpoint.txt
[2025-10-08 04:06:55] -rw-------. 1 boinc boinc       188 Oct  8 04:06 output.list
[2025-10-08 04:06:55] -rw-r--r--. 1 boinc boinc       620 Oct  8 04:06 runtime_log
[2025-10-08 04:06:55] -rw-------. 1 boinc boinc    122880 Oct  8 04:06 result.tar.gz
[2025-10-08 04:06:55] -rw-r--r--. 1 boinc boinc      8528 Oct  8 04:06 runtime_log.err
[2025-10-08 04:06:55] -rw-------. 1 boinc boinc       647 Oct  8 04:06 B7EMDmvFgQ8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDm8yXNDm5TMH3n.diag
[2025-10-08 04:06:55] -rw-r--r--. 1 boinc boinc     21661 Oct  8 04:06 stderr.txt
[2025-10-08 04:06:55] No HITS result produced
[2025-10-08 04:06:55]  *** Contents of shared directory: ***
[2025-10-08 04:06:55] total 219948
[2025-10-08 04:06:55] -rw-r--r--. 2 boinc boinc 224509700 Oct  8 04:02 ATLAS.root_0
[2025-10-08 04:06:55] -rw-r--r--. 2 boinc boinc     15120 Oct  8 04:02 start_atlas.sh
[2025-10-08 04:06:55] -rw-r--r--. 2 boinc boinc    569676 Oct  8 04:02 input.tar.gz
[2025-10-08 04:06:55] -rw-------. 1 boinc boinc    122880 Oct  8 04:06 result.tar.gz
04:06:57 (409446): run_atlas exited; CPU time 19.910947
04:06:57 (409446): called boinc_finish(0)

</stderr_txt>
]]>

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