Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
16:44:58 (24854): wrapper (7.7.26015): starting
16:44:58 (24854): wrapper: running run_atlas (--nthreads 8)
[2025-10-08 16:44:58] Arguments: --nthreads 8
[2025-10-08 16:44:58] Threads: 8
[2025-10-08 16:44:58] Checking for CVMFS
[2025-10-08 16:44:59] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 16:44:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 16:44:59] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 16:45:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 16:45:00] 2.11.2.0 23903 12924 83128 151475 1 254 24556135 25165824 4585 130560 0 4646511 99.974 971788 997 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-08 16:45:00] CVMFS is ok
[2025-10-08 16:45:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 16:45:00] Checking for apptainer binary...
[2025-10-08 16:45:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 16:45:00] Running /usr/bin/apptainer --version
[2025-10-08 16:45:00] apptainer version 1.3.2-1.el7
[2025-10-08 16:45:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 16:45:09] cg-vwn444.simple-grid.lan
[2025-10-08 16:45:09] apptainer works
[2025-10-08 16:45:09] Set ATHENA_PROC_NUMBER=8
[2025-10-08 16:45:09] Set ATHENA_CORE_NUMBER=8
[2025-10-08 16:45:09] Starting ATLAS job with PandaID=6835983488
[2025-10-08 16:45:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-08 21:00:26]  *** The last 200 lines of the pilot log: ***
[2025-10-08 21:00:26] 2025-10-08 18:59:32,802 | INFO     | fitting pss+swap vs Time
[2025-10-08 21:00:26] 2025-10-08 18:59:32,803 | INFO     | sum of square deviations: 4180243959.5
[2025-10-08 21:00:26] 2025-10-08 18:59:32,805 | INFO     | sum of deviations: 92712945654.99998
[2025-10-08 21:00:26] 2025-10-08 18:59:32,805 | INFO     | mean x: 1759942623.5
[2025-10-08 21:00:26] 2025-10-08 18:59:32,806 | INFO     | mean y: 2427158.663865546
[2025-10-08 21:00:26] 2025-10-08 18:59:32,806 | INFO     | -- intersect: -39031051841.444626
[2025-10-08 21:00:26] 2025-10-08 18:59:32,806 | INFO     | intersect: -39031051841.444626
[2025-10-08 21:00:26] 2025-10-08 18:59:32,806 | INFO     | chi2: 5.887123464543893
[2025-10-08 21:00:26] 2025-10-08 18:59:32,810 | INFO     | sum of square deviations: 3922276332.0
[2025-10-08 21:00:26] 2025-10-08 18:59:32,812 | INFO     | sum of deviations: 106128337227.0
[2025-10-08 21:00:26] 2025-10-08 18:59:32,812 | INFO     | mean x: 1759942471.0
[2025-10-08 21:00:26] 2025-10-08 18:59:32,812 | INFO     | mean y: 2434931.901287554
[2025-10-08 21:00:26] 2025-10-08 18:59:32,813 | INFO     | -- intersect: -47617812152.3135
[2025-10-08 21:00:26] 2025-10-08 18:59:32,813 | INFO     | intersect: -47617812152.3135
[2025-10-08 21:00:26] 2025-10-08 18:59:32,813 | INFO     | chi2: 5.157059836696475
[2025-10-08 21:00:26] 2025-10-08 18:59:32,813 | INFO     | current chi2=5.157059836696475 (change=12.401024579225126 %)
[2025-10-08 21:00:26] 2025-10-08 18:59:32,813 | INFO     | right removable region: 232
[2025-10-08 21:00:26] 2025-10-08 18:59:32,814 | INFO     | sum of square deviations: 3922276332.0
[2025-10-08 21:00:26] 2025-10-08 18:59:32,815 | INFO     | sum of deviations: 14103552091.999998
[2025-10-08 21:00:26] 2025-10-08 18:59:32,816 | INFO     | mean x: 1759942776.0
[2025-10-08 21:00:26] 2025-10-08 18:59:32,816 | INFO     | mean y: 2473579.6394849787
[2025-10-08 21:00:26] 2025-10-08 18:59:32,816 | INFO     | -- intersect: -6325852759.2644415
[2025-10-08 21:00:26] 2025-10-08 18:59:32,816 | INFO     | intersect: -6325852759.2644415
[2025-10-08 21:00:26] 2025-10-08 18:59:32,816 | INFO     | chi2: 1.562412801321988
[2025-10-08 21:00:26] 2025-10-08 18:59:32,816 | INFO     | current chi2=1.562412801321988 (change=73.46050561480732 %)
[2025-10-08 21:00:26] 2025-10-08 18:59:32,817 | INFO     | sum of square deviations: 3675146117.0
[2025-10-08 21:00:26] 2025-10-08 18:59:32,822 | INFO     | sum of deviations: -12460564275.5
[2025-10-08 21:00:26] 2025-10-08 18:59:32,822 | INFO     | mean x: 1759942928.5
[2025-10-08 21:00:26] 2025-10-08 18:59:32,822 | INFO     | mean y: 2489825.3640350876
[2025-10-08 21:00:26] 2025-10-08 18:59:32,822 | INFO     | -- intersect: 5969567400.959092
[2025-10-08 21:00:26] 2025-10-08 18:59:32,822 | INFO     | intersect: 5969567400.959092
[2025-10-08 21:00:26] 2025-10-08 18:59:32,823 | INFO     | chi2: 0.8369915664494496
[2025-10-08 21:00:26] 2025-10-08 18:59:32,823 | INFO     | current chi2=0.8369915664494496 (change=46.42955013289352 %)
[2025-10-08 21:00:26] 2025-10-08 18:59:32,823 | INFO     | sum of square deviations: 3438620752.0
[2025-10-08 21:00:26] 2025-10-08 18:59:32,825 | INFO     | sum of deviations: -11098475236.999998
[2025-10-08 21:00:26] 2025-10-08 18:59:32,825 | INFO     | mean x: 1759943081.0
[2025-10-08 21:00:26] 2025-10-08 18:59:32,825 | INFO     | mean y: 2488913.892376682
[2025-10-08 21:00:26] 2025-10-08 18:59:32,826 | INFO     | -- intersect: 5682872448.961551
[2025-10-08 21:00:26] 2025-10-08 18:59:32,826 | INFO     | intersect: 5682872448.961551
[2025-10-08 21:00:26] 2025-10-08 18:59:32,826 | INFO     | chi2: 0.8216674634083002
[2025-10-08 21:00:26] 2025-10-08 18:59:32,826 | INFO     | current chi2=0.8216674634083002 (change=1.8308551310922798 %)
[2025-10-08 21:00:26] 2025-10-08 18:59:32,826 | INFO     | left removable region: 30
[2025-10-08 21:00:26] 2025-10-08 18:59:32,827 | INFO     | sum of square deviations: 2555770710.5
[2025-10-08 21:00:26] 2025-10-08 18:59:32,828 | INFO     | sum of deviations: 4406949239.500001
[2025-10-08 21:00:26] 2025-10-08 18:59:32,832 | INFO     | mean x: 1759943355.5
[2025-10-08 21:00:26] 2025-10-08 18:59:32,832 | INFO     | mean y: 2498187.915841584
[2025-10-08 21:00:26] 2025-10-08 18:59:32,832 | INFO     | -- intersect: -3032195417.507963
[2025-10-08 21:00:26] 2025-10-08 18:59:32,832 | INFO     | intersect: -3032195417.507963
[2025-10-08 21:00:26] 2025-10-08 18:59:32,833 | INFO     | chi2: 0.0010492156838310227
[2025-10-08 21:00:26] 2025-10-08 18:59:32,833 | INFO     | -- intersect: -3032195417.507963
[2025-10-08 21:00:26] 2025-10-08 18:59:32,833 | INFO     | current memory leak: 1.72 B/s (using 202 data points, chi2=0.00)
[2025-10-08 21:00:26] 2025-10-08 18:59:32,834 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-08 21:00:26] 2025-10-08 18:59:32,834 | INFO     | ..............................
[2025-10-08 21:00:26] 2025-10-08 18:59:32,834 | INFO     | . Timing measurements:
[2025-10-08 21:00:26] 2025-10-08 18:59:32,834 | INFO     | . get job = 0 s
[2025-10-08 21:00:26] 2025-10-08 18:59:32,834 | INFO     | . initial setup = 10 s
[2025-10-08 21:00:26] 2025-10-08 18:59:32,834 | INFO     | . payload setup = 113 s
[2025-10-08 21:00:26] 2025-10-08 18:59:32,834 | INFO     | . stage-in = 0 s
[2025-10-08 21:00:26] 2025-10-08 18:59:32,834 | INFO     | . payload execution = 14634 s
[2025-10-08 21:00:26] 2025-10-08 18:59:32,834 | INFO     | . stage-out = 3 s
[2025-10-08 21:00:26] 2025-10-08 18:59:32,835 | INFO     | . log creation = 1 s
[2025-10-08 21:00:26] 2025-10-08 18:59:32,835 | INFO     | ..............................
[2025-10-08 21:00:26] 2025-10-08 18:59:33,150 | INFO     | PID=28624 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-08 21:00:26] 2025-10-08 18:59:33,150 | INFO     | .. there are 9 such processes running
[2025-10-08 21:00:26] 2025-10-08 18:59:33,409 | INFO     | 
[2025-10-08 21:00:26] 2025-10-08 18:59:33,409 | INFO     | job summary report
[2025-10-08 21:00:26] 2025-10-08 18:59:33,409 | INFO     | --------------------------------------------------
[2025-10-08 21:00:26] 2025-10-08 18:59:33,409 | INFO     | PanDA job id: 6835983488
[2025-10-08 21:00:26] 2025-10-08 18:59:33,409 | INFO     | task id: 46676269
[2025-10-08 21:00:26] 2025-10-08 18:59:33,409 | INFO     | errors: (none)
[2025-10-08 21:00:26] 2025-10-08 18:59:33,409 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-08 21:00:26] 2025-10-08 18:59:33,410 | INFO     | pilot state: finished 
[2025-10-08 21:00:26] 2025-10-08 18:59:33,410 | INFO     | transexitcode: 0
[2025-10-08 21:00:26] 2025-10-08 18:59:33,410 | INFO     | exeerrorcode: 0
[2025-10-08 21:00:26] 2025-10-08 18:59:33,410 | INFO     | exeerrordiag: 
[2025-10-08 21:00:26] 2025-10-08 18:59:33,410 | INFO     | exitcode: 0
[2025-10-08 21:00:26] 2025-10-08 18:59:33,410 | INFO     | exitmsg: OK
[2025-10-08 21:00:26] 2025-10-08 18:59:33,410 | INFO     | cpuconsumptiontime: 54675 s
[2025-10-08 21:00:26] 2025-10-08 18:59:33,410 | INFO     | nevents: 400
[2025-10-08 21:00:26] 2025-10-08 18:59:33,410 | INFO     | neventsw: 0
[2025-10-08 21:00:26] 2025-10-08 18:59:33,410 | INFO     | pid: 2740
[2025-10-08 21:00:26] 2025-10-08 18:59:33,410 | INFO     | pgrp: 2740
[2025-10-08 21:00:26] 2025-10-08 18:59:33,411 | INFO     | corecount: 8
[2025-10-08 21:00:26] 2025-10-08 18:59:33,411 | INFO     | event service: False
[2025-10-08 21:00:26] 2025-10-08 18:59:33,411 | INFO     | sizes: {0: 2348625, 1: 2348880, 12: 2348880, 23: 2348908, 33: 2348936, 44: 2348992, 55: 2349148, 66: 2349176, 77: 2349204, 87: 2349260, 92: 2349550, 98: 2349858, 1
[2025-10-08 21:00:26] 2025-10-08 18:59:33,411 | INFO     | --------------------------------------------------
[2025-10-08 21:00:26] 2025-10-08 18:59:33,411 | INFO     | 
[2025-10-08 21:00:26] 2025-10-08 18:59:33,411 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-10-08 21:00:26] 2025-10-08 18:59:33,927 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-08 21:00:26] 2025-10-08 18:59:33,928 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-08 21:00:26] 2025-10-08 18:59:33,928 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-08 21:00:26] 2025-10-08 18:59:33,928 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-08 21:00:26] 2025-10-08 18:59:33,928 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-08 21:00:26] 2025-10-08 18:59:33,928 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-08 21:00:26] 2025-10-08 18:59:33,928 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-08 21:00:26] 2025-10-08 18:59:33,928 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-08 21:00:26] 2025-10-08 18:59:33,928 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-08 21:00:26] 2025-10-08 18:59:33,928 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-08 21:00:26] 2025-10-08 18:59:33,928 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-08 21:00:26] 2025-10-08 18:59:33,929 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-08 21:00:26] 2025-10-08 18:59:33,929 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-08 21:00:26] 2025-10-08 18:59:33,929 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-08 21:00:26] 2025-10-08 18:59:33,929 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-08 21:00:26] 2025-10-08 18:59:33,929 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-08 21:00:26] 2025-10-08 18:59:33,929 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-08 21:00:26] 2025-10-08 18:59:33,929 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-08 21:00:26] 2025-10-08 18:59:33,929 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-08 21:00:26] 2025-10-08 18:59:33,929 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-08 21:00:26] 2025-10-08 18:59:33,929 | INFO     | job 6835983488 has completed (purged errors)
[2025-10-08 21:00:26] 2025-10-08 18:59:33,929 | INFO     | overall cleanup function is called
[2025-10-08 21:00:26] 2025-10-08 18:59:34,939 | INFO     | --- collectZombieJob: --- 10, [2740]
[2025-10-08 21:00:26] 2025-10-08 18:59:34,939 | INFO     | zombie collector waiting for pid 2740
[2025-10-08 21:00:26] 2025-10-08 18:59:34,939 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-08 21:00:26] 2025-10-08 18:59:34,939 | INFO     | collected zombie processes
[2025-10-08 21:00:26] 2025-10-08 18:59:34,939 | INFO     | will attempt to kill all subprocesses of pid=2740
[2025-10-08 21:00:26] 2025-10-08 18:59:35,029 | INFO     | process IDs to be killed: [2740] (in reverse order)
[2025-10-08 21:00:26] 2025-10-08 18:59:35,917 | WARNING  | found no corresponding commands to process id(s)
[2025-10-08 21:00:26] 2025-10-08 18:59:35,918 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-08 21:00:26] 2025-10-08 18:59:35,921 | INFO     | did not find any defunct processes belonging to 2740
[2025-10-08 21:00:26] 2025-10-08 18:59:35,923 | INFO     | did not find any defunct processes belonging to 2740
[2025-10-08 21:00:26] 2025-10-08 18:59:35,923 | INFO     | ready for new job
[2025-10-08 21:00:26] 2025-10-08 18:59:35,923 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-08 21:00:26] 2025-10-08 18:59:35,925 | INFO     | ***************************************
[2025-10-08 21:00:26] 2025-10-08 18:59:35,925 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-08 21:00:26] 2025-10-08 18:59:35,925 | INFO     | ***************************************
[2025-10-08 21:00:26] 2025-10-08 18:59:35,931 | INFO     | 
[2025-10-08 21:00:26] 2025-10-08 18:59:35,932 | INFO     | pilot is running in a VM
[2025-10-08 21:00:26] 2025-10-08 18:59:35,932 | INFO     | architecture information:
[2025-10-08 21:00:26] 2025-10-08 18:59:35,932 | INFO     | executing command: cat /etc/os-release
[2025-10-08 21:00:26] 2025-10-08 18:59:36,061 | INFO     | cat /etc/os-release:
[2025-10-08 21:00:26] NAME="CentOS Linux"
[2025-10-08 21:00:26] VERSION="7 (Core)"
[2025-10-08 21:00:26] ID="centos"
[2025-10-08 21:00:26] ID_LIKE="rhel fedora"
[2025-10-08 21:00:26] VERSION_ID="7"
[2025-10-08 21:00:26] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-08 21:00:26] ANSI_COLOR="0;31"
[2025-10-08 21:00:26] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-08 21:00:26] HOME_URL="https://www.centos.org/"
[2025-10-08 21:00:26] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-08 21:00:26] 
[2025-10-08 21:00:26] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-08 21:00:26] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-08 21:00:26] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-08 21:00:26] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-08 21:00:26] 
[2025-10-08 21:00:26] 2025-10-08 18:59:36,062 | INFO     | ***************************************
[2025-10-08 21:00:26] 2025-10-08 18:59:36,565 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-10-08 21:00:26] 2025-10-08 18:59:36,825 | INFO     | sufficient remaining disk space (495985885184 B)
[2025-10-08 21:00:26] 2025-10-08 18:59:36,826 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-08 21:00:26] 2025-10-08 18:59:36,826 | INFO     | current server update state: UPDATING_FINAL
[2025-10-08 21:00:26] 2025-10-08 18:59:36,826 | INFO     | update_server=False
[2025-10-08 21:00:26] 2025-10-08 18:59:36,826 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-08 21:00:26] 2025-10-08 18:59:36,830 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-08 21:00:26] 2025-10-08 18:59:36,892 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-08 21:00:26] 2025-10-08 18:59:37,582 | INFO     | all data control threads have been joined
[2025-10-08 21:00:26] 2025-10-08 18:59:37,769 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-08 21:00:26] 2025-10-08 18:59:37,769 | INFO     | aborting loop
[2025-10-08 21:00:26] 2025-10-08 18:59:37,832 | INFO     | [job] retrieve thread has finished
[2025-10-08 21:00:26] 2025-10-08 18:59:37,904 | INFO     | [payload] failed_post thread has finished
[2025-10-08 21:00:26] 2025-10-08 18:59:38,042 | INFO     | [payload] validate_pre thread has finished
[2025-10-08 21:00:26] 2025-10-08 18:59:38,048 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-08 21:00:26] 2025-10-08 18:59:38,065 | INFO     | all payload control threads have been joined
[2025-10-08 21:00:26] 2025-10-08 18:59:38,106 | INFO     | [job] create_data_payload thread has finished
[2025-10-08 21:00:26] 2025-10-08 18:59:38,110 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-08 21:00:26] 2025-10-08 18:59:38,267 | INFO     | all job control threads have been joined
[2025-10-08 21:00:26] 2025-10-08 18:59:38,588 | INFO     | [data] control thread has finished
[2025-10-08 21:00:26] 2025-10-08 18:59:38,730 | INFO     | [job] validate thread has finished
[2025-10-08 21:00:26] 2025-10-08 18:59:38,775 | INFO     | [job] job monitor thread has finished
[2025-10-08 21:00:26] 2025-10-08 18:59:38,865 | INFO     | [payload] execute_payloads thread has finished
[2025-10-08 21:00:26] 2025-10-08 18:59:38,899 | INFO     | [data] copytool_out thread has finished
[2025-10-08 21:00:26] 2025-10-08 18:59:39,029 | INFO     | [payload] validate_post thread has finished
[2025-10-08 21:00:26] 2025-10-08 18:59:39,071 | INFO     | [payload] control thread has finished
[2025-10-08 21:00:26] 2025-10-08 18:59:39,116 | INFO     | [job] queue monitor thread has finished
[2025-10-08 21:00:26] 2025-10-08 18:59:39,118 | INFO     | [data] copytool_in thread has finished
[2025-10-08 21:00:26] 2025-10-08 18:59:39,273 | INFO     | [job] control thread has finished
[2025-10-08 21:00:26] 2025-10-08 18:59:40,839 | INFO     | [data] queue_monitor thread has finished
[2025-10-08 21:00:26] 2025-10-08 19:00:05,316 | INFO     | PID=28624 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-08 21:00:26] 2025-10-08 19:00:05,316 | INFO     | .. there are 9 such processes running
[2025-10-08 21:00:26] 2025-10-08 19:00:05,317 | INFO     | found 0 job(s) in 20 queues
[2025-10-08 21:00:26] 2025-10-08 19:00:05,317 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-08 21:00:26] 2025-10-08 19:00:05,318 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-08 21:00:26] 2025-10-08 19:00:15,699 | INFO     | [monitor] cgroup control has ended
[2025-10-08 21:00:26] 2025-10-08 19:00:16,855 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139795870689088)>', '<ExcThread(monitor, started 139795565090560)>']
[2025-10-08 21:00:26] 2025-10-08 19:00:17,389 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-08 21:00:26] 2025-10-08 19:00:17,389 | INFO     | [monitor] control thread has ended
[2025-10-08 21:00:26] 2025-10-08 19:00:21,881 | INFO     | all workflow threads have been joined
[2025-10-08 21:00:26] 2025-10-08 19:00:21,881 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-08 21:00:26] 2025-10-08 19:00:21,881 | INFO     | traces error code: 0
[2025-10-08 21:00:26] 2025-10-08 19:00:21,881 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-08 21:00:26] 2025-10-08 19:00:22,335 [wrapper] ==== pilot stdout END ====
[2025-10-08 21:00:26] 2025-10-08 19:00:22,429 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-08 21:00:26] 2025-10-08 19:00:22,536 [wrapper] pilotpid: 28624
[2025-10-08 21:00:26] 2025-10-08 19:00:22,614 [wrapper] Pilot exit status: 0
[2025-10-08 21:00:26] 2025-10-08 19:00:23,057 [wrapper] pandaids: 6835983488
[2025-10-08 21:00:26] 2025-10-08 19:00:23,435 [wrapper] cleanup supervisor_pilot 29571 28625
[2025-10-08 21:00:26] 2025-10-08 19:00:23,573 [wrapper] Test setup, not cleaning
[2025-10-08 21:00:26] 2025-10-08 19:00:23,675 [wrapper] apfmon messages muted
[2025-10-08 21:00:26] 2025-10-08 19:00:23,816 [wrapper] ==== wrapper stdout END ====
[2025-10-08 21:00:26] 2025-10-08 19:00:23,916 [wrapper] ==== wrapper stderr END ====
[2025-10-08 21:00:26]  *** Error codes and diagnostics ***
[2025-10-08 21:00:26]     "exeErrorCode": 0,
[2025-10-08 21:00:26]     "exeErrorDiag": "",
[2025-10-08 21:00:26]     "pilotErrorCode": 0,
[2025-10-08 21:00:26]     "pilotErrorDiag": "",
[2025-10-08 21:00:26]  *** Listing of results directory ***
[2025-10-08 21:00:26] total 412612
[2025-10-08 21:00:26] -rw-r--r--. 1 boinc boinc    557409 Oct  8 12:04 pilot3.tar.gz
[2025-10-08 21:00:26] -rwx------. 1 boinc boinc     36292 Oct  8 12:04 runpilot2-wrapper.sh
[2025-10-08 21:00:26] -rw-r--r--. 1 boinc boinc      5112 Oct  8 12:04 queuedata.json
[2025-10-08 21:00:26] -rw-r--r--. 1 boinc boinc       100 Oct  8 16:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-08 21:00:26] -rwxr-xr-x. 1 boinc boinc      7986 Oct  8 16:44 run_atlas
[2025-10-08 21:00:26] -rw-r--r--. 1 boinc boinc       105 Oct  8 16:44 job.xml
[2025-10-08 21:00:26] -rw-r--r--. 2 boinc boinc 222070995 Oct  8 16:44 EVNT.46676267._000194.pool.root.1
[2025-10-08 21:00:26] -rw-r--r--. 1 boinc boinc      6391 Oct  8 16:44 init_data.xml
[2025-10-08 21:00:26] -rw-r--r--. 2 boinc boinc     15120 Oct  8 16:44 start_atlas.sh
[2025-10-08 21:00:26] drwxrwx--x. 2 boinc boinc        68 Oct  8 16:44 shared
[2025-10-08 21:00:26] -rw-r--r--. 2 boinc boinc    569678 Oct  8 16:44 input.tar.gz
[2025-10-08 21:00:26] -rw-r--r--. 1 boinc boinc         0 Oct  8 16:44 boinc_lockfile
[2025-10-08 21:00:26] -rw-r--r--. 1 boinc boinc      2548 Oct  8 16:45 pandaJob.out
[2025-10-08 21:00:26] -rw-------. 1 boinc boinc    979287 Oct  8 16:48 agis_schedconf.cvmfs.json
[2025-10-08 21:00:26] drwx------. 5 boinc boinc      4096 Oct  8 16:48 pilot3
[2025-10-08 21:00:26] -rw-------. 1 boinc boinc 191554264 Oct  8 20:56 HITS.46676269._004928.pool.root.1
[2025-10-08 21:00:26] -rw-r--r--. 1 boinc boinc       531 Oct  8 20:57 boinc_task_state.xml
[2025-10-08 21:00:26] -rw-------. 1 boinc boinc      1014 Oct  8 20:57 memory_monitor_summary.json
[2025-10-08 21:00:26] -rw-------. 1 boinc boinc   1560401 Oct  8 20:57 agis_ddmendpoints.agis.ALL.json
[2025-10-08 21:00:26] -rw-------. 1 boinc boinc    477827 Oct  8 20:57 log.46676269._004928.job.log.tgz.1
[2025-10-08 21:00:26] -rw-------. 1 boinc boinc      7778 Oct  8 20:59 heartbeat.json
[2025-10-08 21:00:26] -rw-r--r--. 1 boinc boinc        28 Oct  8 20:59 wrapper_checkpoint.txt
[2025-10-08 21:00:26] -rw-r--r--. 1 boinc boinc      8192 Oct  8 20:59 boinc_mmap_file
[2025-10-08 21:00:26] -rw-------. 1 boinc boinc        95 Oct  8 21:00 pilot_heartbeat.json
[2025-10-08 21:00:26] -rw-------. 1 boinc boinc      4884 Oct  8 21:00 pilotlog.txt
[2025-10-08 21:00:26] -rw-------. 1 boinc boinc   2022621 Oct  8 21:00 log.46676269._004928.job.log.1
[2025-10-08 21:00:26] -rw-------. 1 boinc boinc       357 Oct  8 21:00 output.list
[2025-10-08 21:00:26] -rw-r--r--. 1 boinc boinc       620 Oct  8 21:00 runtime_log
[2025-10-08 21:00:26] -rw-------. 1 boinc boinc   2519040 Oct  8 21:00 result.tar.gz
[2025-10-08 21:00:26] -rw-r--r--. 1 boinc boinc      8703 Oct  8 21:00 runtime_log.err
[2025-10-08 21:00:26] -rw-------. 1 boinc boinc       656 Oct  8 21:00 JWhLDmzCgQ8n9Rq4apOajLDm4fhM0noT9bVof3QYDmeTMMDm2DW1Dn.diag
[2025-10-08 21:00:26] -rw-r--r--. 1 boinc boinc     20716 Oct  8 21:00 stderr.txt
[2025-10-08 21:00:26] HITS file was successfully produced:
[2025-10-08 21:00:26] -rw-------. 1 boinc boinc 191554264 Oct  8 20:56 shared/HITS.pool.root.1
[2025-10-08 21:00:26]  *** Contents of shared directory: ***
[2025-10-08 21:00:26] total 406972
[2025-10-08 21:00:26] -rw-r--r--. 2 boinc boinc 222070995 Oct  8 16:44 ATLAS.root_0
[2025-10-08 21:00:26] -rw-r--r--. 2 boinc boinc     15120 Oct  8 16:44 start_atlas.sh
[2025-10-08 21:00:26] -rw-r--r--. 2 boinc boinc    569678 Oct  8 16:44 input.tar.gz
[2025-10-08 21:00:26] -rw-------. 1 boinc boinc 191554264 Oct  8 20:56 HITS.pool.root.1
[2025-10-08 21:00:26] -rw-------. 1 boinc boinc   2519040 Oct  8 21:00 result.tar.gz
21:00:28 (24854): run_atlas exited; CPU time 54878.434239
21:00:28 (24854): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN