Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-08 13:48:57 (6988): vboxwrapper version 26210
2025-10-08 13:48:57 (6988): BOINC client version: 8.2.4
2025-10-08 13:48:58 (6988): Detected: VirtualBox VboxManage Interface (Version: 6.1.12)
2025-10-08 13:48:58 (6988): Successfully copied 'init_data.xml' to the shared directory.
2025-10-08 13:48:59 (6988): Create VM. (boinc_77c82b491e0c3416, slot#4)
2025-10-08 13:48:59 (6988): Setting Memory Size for VM. (4600MB)
2025-10-08 13:48:59 (6988): Setting CPU Count for VM. (6)
2025-10-08 13:49:00 (6988): Setting Chipset Options for VM.
2025-10-08 13:49:00 (6988): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-08 13:49:00 (6988): Setting Boot Options for VM.
2025-10-08 13:49:01 (6988): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-08 13:49:01 (6988): Enabling VM Network Access.
2025-10-08 13:49:01 (6988): Disabling USB Support for VM.
2025-10-08 13:49:02 (6988): Disabling COM Port Support for VM.
2025-10-08 13:49:02 (6988): Disabling LPT Port Support for VM.
2025-10-08 13:49:02 (6988): Disabling Audio Support for VM.
2025-10-08 13:49:02 (6988): Disabling Clipboard Support for VM.
2025-10-08 13:49:03 (6988): Disabling Drag and Drop Support for VM.
2025-10-08 13:49:03 (6988): Adding storage controller(s) to VM.
2025-10-08 13:49:03 (6988): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-08 13:49:04 (6988): Adding VirtualBox Guest Additions to VM.
2025-10-08 13:49:05 (6988): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-08 13:49:05 (6988): forwarding host port 64103 to guest port 80
2025-10-08 13:49:05 (6988): Enabling remote desktop for VM.
2025-10-08 13:49:05 (6988): Required extension pack not installed, remote desktop not enabled.
2025-10-08 13:49:05 (6988): Enabling shared directory for VM.
2025-10-08 13:49:06 (6988): Starting VM using VBoxManage interface. (boinc_77c82b491e0c3416, slot#4)
2025-10-08 13:49:11 (6988): Successfully started VM. (PID = '11208')
2025-10-08 13:49:11 (6988): Reporting VM Process ID to BOINC.
2025-10-08 13:49:11 (6988): Guest Log: BIOS: VirtualBox 6.1.12
2025-10-08 13:49:11 (6988): Guest Log: CPUID EDX: 0x178bfbff
2025-10-08 13:49:11 (6988): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-08 13:49:11 (6988): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-08 13:49:11 (6988): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-08 13:49:11 (6988): Detected: Web Application Enabled (http://localhost:64103)
2025-10-08 13:49:11 (6988): Preference change detected
2025-10-08 13:49:11 (6988): Setting CPU throttle for VM. (75%)
2025-10-08 13:49:12 (6988): Setting checkpoint interval to 1500 seconds. (Higher value of (Preference: 1500 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-08 13:49:13 (6988): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-08 13:49:13 (6988): Guest Log: BIOS: Booting from Hard Disk...
2025-10-08 13:49:17 (6988): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-08 13:49:17 (6988): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-08 13:49:17 (6988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-08 13:49:17 (6988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-08 13:49:17 (6988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-08 13:49:17 (6988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-08 13:49:17 (6988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-08 13:49:17 (6988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-08 13:49:17 (6988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-08 13:49:17 (6988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-08 13:49:17 (6988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-08 13:49:17 (6988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-08 13:49:17 (6988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-08 13:49:17 (6988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-08 13:49:17 (6988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-08 13:49:17 (6988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-08 13:49:17 (6988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-08 13:49:17 (6988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-08 13:49:17 (6988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-08 13:49:17 (6988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-08 13:49:17 (6988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-08 13:49:17 (6988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-08 13:49:17 (6988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-08 13:49:17 (6988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-08 13:49:17 (6988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-08 13:49:17 (6988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-08 13:49:17 (6988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-08 13:49:17 (6988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-08 13:49:17 (6988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-08 13:49:17 (6988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-08 13:49:17 (6988): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-08 13:49:17 (6988): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-08 13:49:27 (6988): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-08 13:49:27 (6988): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2025-10-08 13:49:31 (6988): VM state change detected. (old = 'running', new = 'paused')
2025-10-08 13:49:51 (6988): VM state change detected. (old = 'paused', new = 'running')
2025-10-08 13:49:54 (6988): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-08 13:49:54 (6988): Guest Log: 00:00:00.000166 main     Log opened 2025-10-08T13:49:32.825273000Z
2025-10-08 13:49:54 (6988): Guest Log: 00:00:00.000280 main     OS Product: Linux
2025-10-08 13:49:54 (6988): Guest Log: 00:00:00.000310 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-08 13:49:54 (6988): Guest Log: 00:00:00.000335 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-08 13:49:54 (6988): Guest Log: 00:00:00.000359 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-08 13:49:54 (6988): Guest Log: 00:00:00.000360 main     Process ID: 1335
2025-10-08 13:49:54 (6988): Guest Log: 00:00:00.000360 main     Package type: LINUX_64BITS_GENERIC
2025-10-08 13:49:54 (6988): Guest Log: 00:00:00.001856 main     5.2.32 r132073 started. Verbose level = 0
2025-10-08 13:49:54 (6988): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-08 13:49:54 (6988): Guest Log: [INFO] Mounting shared directory
2025-10-08 13:49:54 (6988): Guest Log: [INFO] Checking for init_data.xml
2025-10-08 13:49:59 (6988): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-08 13:49:59 (6988): Guest Log: [INFO] Detected branch: prod
2025-10-08 13:50:00 (6988): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-08 13:50:00 (6988): Guest Log: Copying input files
2025-10-08 13:50:03 (6988): Guest Log: Copied input files into RunAtlas.
2025-10-08 13:50:03 (6988): Guest Log: This VM did not configure a local http proxy via BOINC.
2025-10-08 13:50:03 (6988): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2025-10-08 13:50:03 (6988): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2025-10-08 13:50:03 (6988): Guest Log: Further information can be found at the LHC@home message board.
2025-10-08 13:50:04 (6988): Guest Log: 00:00:10.004359 timesync vgsvcTimeSyncWorker: Radical guest time change: -10 768 389 462 000ns (GuestNow=1 759 920 604 439 493 000 ns GuestLast=1 759 931 372 828 955 000 ns fSetTimeLastLoop=true )
2025-10-08 13:50:14 (6988): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-08 13:50:15 (6988): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-08 13:50:15 (6988): Guest Log: 2.6.3.0 1611 0 32144 151469 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2025-10-08 13:50:17 (6988): Guest Log: copied the webapp to /var/www
2025-10-08 13:50:17 (6988): Guest Log: ATHENA_PROC_NUMBER=6
2025-10-08 13:50:17 (6988): Guest Log: ATHENA_CORE_NUMBER=6
2025-10-08 13:50:17 (6988): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-08 13:50:17 (6988): Guest Log:  *** Starting ATLAS job. (PandaID=6835982270 taskID=46676269) ***
2025-10-08 14:28:34 (6988): VM state change detected. (old = 'running', new = 'paused')
2025-10-08 14:28:55 (6988): VM state change detected. (old = 'paused', new = 'running')
2025-10-08 15:13:37 (6988): VM state change detected. (old = 'running', new = 'paused')
2025-10-08 15:13:58 (6988): VM state change detected. (old = 'paused', new = 'running')
2025-10-08 15:30:21 (6988): Status Report: Elapsed Time: '6000.000000'
2025-10-08 15:30:21 (6988): Status Report: CPU Time: '24742.468750'
2025-10-08 15:53:41 (6988): VM state change detected. (old = 'running', new = 'paused')
2025-10-08 15:54:00 (6988): VM state change detected. (old = 'paused', new = 'running')
2025-10-08 15:54:20 (6988): VM state change detected. (old = 'running', new = 'paused')
2025-10-08 15:54:40 (6988): VM state change detected. (old = 'paused', new = 'running')
2025-10-08 15:55:30 (6988): VM state change detected. (old = 'running', new = 'paused')
2025-10-08 15:55:50 (6988): VM state change detected. (old = 'paused', new = 'running')
2025-10-08 15:57:10 (6988): VM state change detected. (old = 'running', new = 'paused')
2025-10-08 15:57:30 (6988): VM state change detected. (old = 'paused', new = 'running')
2025-10-08 16:09:42 (6988): VM state change detected. (old = 'running', new = 'paused')
2025-10-08 16:10:02 (6988): VM state change detected. (old = 'paused', new = 'running')
2025-10-08 16:25:13 (6988): VM state change detected. (old = 'running', new = 'paused')
2025-10-08 16:25:33 (6988): VM state change detected. (old = 'paused', new = 'running')
2025-10-08 16:35:13 (6988): Guest Log:  *** Job finished ***
2025-10-08 16:35:13 (6988): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-08 16:35:13 (6988): Guest Log: 2025-10-08 13:32:09,983 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-08 16:35:13 (6988): Guest Log: 2025-10-08 13:32:09,983 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-08 16:35:13 (6988): Guest Log: 2025-10-08 13:32:26,003 | INFO     | [monitor] cgroup control has ended
2025-10-08 16:35:13 (6988): Guest Log: 2025-10-08 13:32:28,011 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139778918737728)>', '<ExcThread(monitor, started 139777890313984)>']
2025-10-08 16:35:13 (6988): Guest Log: 2025-10-08 13:32:28,390 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-08 16:35:13 (6988): Guest Log: 2025-10-08 13:32:28,391 | INFO     | [monitor] control thread has ended
2025-10-08 16:35:13 (6988): Guest Log: 2025-10-08 13:32:33,219 | INFO     | all workflow threads have been joined
2025-10-08 16:35:13 (6988): Guest Log: 2025-10-08 13:32:33,220 | INFO     | end of generic workflow (traces error code: 0)
2025-10-08 16:35:13 (6988): Guest Log: 2025-10-08 13:32:33,220 | INFO     | traces error code: 0
2025-10-08 16:35:13 (6988): Guest Log: 2025-10-08 13:32:33,220 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-08 16:35:13 (6988): Guest Log: 2025-10-08 13:32:33,290 [wrapper] ==== pilot stdout END ====
2025-10-08 16:35:13 (6988): Guest Log: 2025-10-08 13:32:33,295 [wrapper] ==== wrapper stdout RESUME ====
2025-10-08 16:35:13 (6988): Guest Log: 2025-10-08 13:32:33,299 [wrapper] pilotpid: 6023
2025-10-08 16:35:13 (6988): Guest Log: 2025-10-08 13:32:33,329 [wrapper] Pilot exit status: 0
2025-10-08 16:35:13 (6988): Guest Log: 2025-10-08 13:32:33,386 [wrapper] pandaids: 6835982270
2025-10-08 16:35:13 (6988): Guest Log: 2025-10-08 13:32:33,420 [wrapper] cleanup supervisor_pilot  6215 6024
2025-10-08 16:35:13 (6988): Guest Log: 2025-10-08 13:32:33,428 [wrapper] Test setup, not cleaning
2025-10-08 16:35:13 (6988): Guest Log: 2025-10-08 13:32:33,434 [wrapper] apfmon messages muted
2025-10-08 16:35:13 (6988): Guest Log: 2025-10-08 13:32:33,439 [wrapper] ==== wrapper stdout END ====
2025-10-08 16:35:13 (6988): Guest Log: 2025-10-08 13:32:33,444 [wrapper] ==== wrapper stderr END ====
2025-10-08 16:35:13 (6988): Guest Log:  *** Error codes and diagnostics ***
2025-10-08 16:35:13 (6988): Guest Log:     "exeErrorCode": 0,
2025-10-08 16:35:13 (6988): Guest Log:     "exeErrorDiag": "",
2025-10-08 16:35:13 (6988): Guest Log:     "pilotErrorCode": 0,
2025-10-08 16:35:13 (6988): Guest Log:     "pilotErrorDiag": "",
2025-10-08 16:35:13 (6988): Guest Log:  *** Listing of results directory ***
2025-10-08 16:35:13 (6988): Guest Log: total 193720
2025-10-08 16:35:13 (6988): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct  8 10:04 pilot3.tar.gz
2025-10-08 16:35:13 (6988): Guest Log: -rwx------. 1 atlas atlas     36292 Oct  8 10:04 runpilot2-wrapper.sh
2025-10-08 16:35:13 (6988): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct  8 10:04 queuedata.json
2025-10-08 16:35:13 (6988): Guest Log: -rwxr-xr-x. 1 atlas atlas      8743 Oct  8 10:50 init_data.xml
2025-10-08 16:35:13 (6988): Guest Log: -rwxr-xr-x. 1 atlas atlas    569676 Oct  8 10:50 input.tar.gz
2025-10-08 16:35:13 (6988): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct  8 10:50 start_atlas.sh
2025-10-08 16:35:13 (6988): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct  8 10:50 EVNT.46676267._000186.pool.root.1 -> /data/./ATLAS.root_0
2025-10-08 16:35:13 (6988): Guest Log: -rw-r--r--. 1 atlas atlas      2546 Oct  8 10:50 pandaJob.out
2025-10-08 16:35:13 (6988): Guest Log: -rw-------. 1 atlas atlas    979793 Oct  8 10:51 agis_schedconf.cvmfs.json
2025-10-08 16:35:13 (6988): Guest Log: -rw-------. 1 atlas atlas   1560401 Oct  8 10:51 agis_ddmendpoints.agis.ALL.json
2025-10-08 16:35:13 (6988): Guest Log: drwx------. 5 atlas atlas      4096 Oct  8 10:51 pilot3
2025-10-08 16:35:13 (6988): Guest Log: -rw-------. 1 atlas atlas 191394860 Oct  8 13:30 HITS.46676269._004757.pool.root.1
2025-10-08 16:35:13 (6988): Guest Log: -rw-------. 1 atlas atlas        95 Oct  8 13:31 pilot_heartbeat.json
2025-10-08 16:35:13 (6988): Guest Log: -rw-------. 1 atlas atlas      1030 Oct  8 13:31 memory_monitor_summary.json
2025-10-08 16:35:13 (6988): Guest Log: -rw-------. 1 atlas atlas    344211 Oct  8 13:31 log.46676269._004757.job.log.tgz.1
2025-10-08 16:35:13 (6988): Guest Log: -rw-------. 1 atlas atlas      7821 Oct  8 13:31 heartbeat.json
2025-10-08 16:35:13 (6988): Guest Log: -rw-------. 1 atlas atlas      4877 Oct  8 13:32 pilotlog.txt
2025-10-08 16:35:13 (6988): Guest Log: -rw-------. 1 atlas atlas   1223148 Oct  8 13:32 log.46676269._004757.job.log.1
2025-10-08 16:35:13 (6988): Guest Log: -rw-------. 1 atlas atlas       357 Oct  8 13:32 output.list
2025-10-08 16:35:13 (6988): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct  8 13:32 runtime_log
2025-10-08 16:35:13 (6988): Guest Log: -rw-------. 1 atlas atlas   1587200 Oct  8 13:32 result.tar.gz
2025-10-08 16:35:13 (6988): Guest Log: -rw-r--r--. 1 atlas atlas      8630 Oct  8 13:32 runtime_log.err
2025-10-08 16:35:13 (6988): Guest Log: -rw-------. 1 atlas atlas       651 Oct  8 13:32 FmbKDmzCgQ8n9Rq4apOajLDm4fhM0noT9bVof3QYDmxSMMDmmTeH7n.diag
2025-10-08 16:35:13 (6988): Guest Log: Looking for outputfile HITS.46676269._004757.pool.root.1
2025-10-08 16:35:13 (6988): Guest Log: HITS file was successfully produced
2025-10-08 16:35:13 (6988): Guest Log: -rw-------. 1 atlas atlas 191394860 Oct  8 13:30 /home/atlas/RunAtlas/HITS.46676269._004757.pool.root.1
2025-10-08 16:35:14 (6988): Guest Log: Successfully finished the ATLAS job!
2025-10-08 16:35:14 (6988): Guest Log: Copying the results back to the shared directory!
2025-10-08 16:35:14 (6988): Guest Log:  *** Contents of shared directory: ***
2025-10-08 16:35:14 (6988): Guest Log: total 406956
2025-10-08 16:35:14 (6988): Guest Log: -rwxrwxrwx. 1 root root 223131498 Oct  8 10:48 ATLAS.root_0
2025-10-08 16:35:14 (6988): Guest Log: -rwxrwxrwx. 1 root root 191394860 Oct  8  2025 HITS.pool.root.1
2025-10-08 16:35:14 (6988): Guest Log: -rwxrwxrwx. 1 root root      8743 Oct  8 10:48 init_data.xml
2025-10-08 16:35:14 (6988): Guest Log: -rwxrwxrwx. 1 root root    569676 Oct  8 10:48 input.tar.gz
2025-10-08 16:35:14 (6988): Guest Log: -rwxrwxrwx. 1 root root   1587200 Oct  8  2025 result.tar.gz
2025-10-08 16:35:14 (6988): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct  8 10:48 start_atlas.sh
2025-10-08 16:35:14 (6988): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-08 16:35:14 (6988): VM Completion File Detected.
2025-10-08 16:35:14 (6988): Powering off VM.
2025-10-08 16:35:15 (6988): Successfully stopped VM.
2025-10-08 16:35:15 (6988): Deregistering VM. (boinc_77c82b491e0c3416, slot#4)
2025-10-08 16:35:15 (6988): Removing network bandwidth throttle group from VM.
2025-10-08 16:35:15 (6988): Removing VM from VirtualBox.
2025-10-08 16:35:21 (6988): called boinc_finish(0)

</stderr_txt>
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