Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
19:21:40 (812989): wrapper (7.7.26015): starting
19:21:40 (812989): wrapper: running run_atlas (--nthreads 8)
[2025-10-08 19:21:40] Arguments: --nthreads 8
[2025-10-08 19:21:40] Threads: 8
[2025-10-08 19:21:40] Checking for CVMFS
[2025-10-08 19:21:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 19:21:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 19:21:41] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 19:21:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 19:21:41] 2.13.2.0 184081 102511 402612 151489 0 17 23968700 39288832 16227 16776704 0 131710695 99.514 172237743 30548 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-08 19:21:41] CVMFS is ok
[2025-10-08 19:21:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-08 19:21:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-08 19:21:41] Further information can be found at the LHC@home message board.
[2025-10-08 19:21:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 19:21:41] Checking for apptainer binary...
[2025-10-08 19:21:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 19:21:41] Running /usr/bin/apptainer --version
[2025-10-08 19:21:41] apptainer version 1.4.3-1.el9
[2025-10-08 19:21:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 19:21:42] c-211-20.aglt2.org
[2025-10-08 19:21:42] apptainer works
[2025-10-08 19:21:42] Set ATHENA_PROC_NUMBER=8
[2025-10-08 19:21:42] Set ATHENA_CORE_NUMBER=8
[2025-10-08 19:21:43] Starting ATLAS job with PandaID=6835982211
[2025-10-08 19:21:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-09 10:42:56]  *** The last 200 lines of the pilot log: ***
[2025-10-09 10:42:56] 2025-10-09 14:41:50,040 | INFO     | sum of deviations: -335338373428.99646
[2025-10-09 10:42:56] 2025-10-09 14:41:50,040 | INFO     | mean x: 1759993313.6710963
[2025-10-09 10:42:56] 2025-10-09 14:41:50,041 | INFO     | mean y: 2536506.5825027684
[2025-10-09 10:42:56] 2025-10-09 14:41:50,041 | INFO     | -- intersect: 2587493295.469972
[2025-10-09 10:42:56] 2025-10-09 14:41:50,041 | INFO     | intersect: 2587493295.469972
[2025-10-09 10:42:56] 2025-10-09 14:41:50,042 | INFO     | chi2: 4.961856586796003
[2025-10-09 10:42:56] 2025-10-09 14:41:50,044 | INFO     | sum of square deviations: 224546859564.901
[2025-10-09 10:42:56] 2025-10-09 14:41:50,375 | INFO     | sum of deviations: -150594682991.41425
[2025-10-09 10:42:56] 2025-10-09 14:41:50,376 | INFO     | mean x: 1759993161.1737194
[2025-10-09 10:42:56] 2025-10-09 14:41:50,376 | INFO     | mean y: 2543958.618040089
[2025-10-09 10:42:56] 2025-10-09 14:41:50,376 | INFO     | -- intersect: 1182901647.3765726
[2025-10-09 10:42:56] 2025-10-09 14:41:50,376 | INFO     | intersect: 1182901647.3765726
[2025-10-09 10:42:56] 2025-10-09 14:41:50,490 | INFO     | chi2: 2.5804083299572516
[2025-10-09 10:42:56] 2025-10-09 14:41:50,490 | INFO     | current chi2=2.5804083299572516 (change=47.995104557758154 %)
[2025-10-09 10:42:56] 2025-10-09 14:41:50,491 | INFO     | sum of square deviations: 220816830496.86478
[2025-10-09 10:42:56] 2025-10-09 14:41:50,801 | INFO     | sum of deviations: -150040648642.92642
[2025-10-09 10:42:56] 2025-10-09 14:41:50,802 | INFO     | mean x: 1759993008.6718924
[2025-10-09 10:42:56] 2025-10-09 14:41:50,802 | INFO     | mean y: 2543981.2698768196
[2025-10-09 10:42:56] 2025-10-09 14:41:50,802 | INFO     | -- intersect: 1198424259.208635
[2025-10-09 10:42:56] 2025-10-09 14:41:50,802 | INFO     | intersect: 1198424259.208635
[2025-10-09 10:42:56] 2025-10-09 14:41:50,804 | INFO     | chi2: 2.5799416125931898
[2025-10-09 10:42:56] 2025-10-09 14:41:50,804 | INFO     | current chi2=2.5799416125931898 (change=0.018086957736240063 %)
[2025-10-09 10:42:56] 2025-10-09 14:41:50,808 | INFO     | right removable region: 892
[2025-10-09 10:42:56] 2025-10-09 14:41:50,810 | INFO     | sum of square deviations: 224546599704.90094
[2025-10-09 10:42:56] 2025-10-09 14:41:50,872 | INFO     | time since job start (55175s) is within the limit (172800.0s)
[2025-10-09 10:42:56] 2025-10-09 14:41:50,882 | INFO     | sum of deviations: -510829366480.8643
[2025-10-09 10:42:56] 2025-10-09 14:41:50,883 | INFO     | mean x: 1759993466.1737194
[2025-10-09 10:42:56] 2025-10-09 14:41:50,883 | INFO     | mean y: 2543587.531180401
[2025-10-09 10:42:56] 2025-10-09 14:41:50,883 | INFO     | -- intersect: 4006417832.4207535
[2025-10-09 10:42:56] 2025-10-09 14:41:50,883 | INFO     | intersect: 4006417832.4207535
[2025-10-09 10:42:56] 2025-10-09 14:41:50,959 | INFO     | chi2: 3.1088799851413196
[2025-10-09 10:42:56] 2025-10-09 14:41:50,959 | INFO     | current chi2=3.1088799851413196 (change=37.34442076753366 %)
[2025-10-09 10:42:56] 2025-10-09 14:41:50,960 | INFO     | sum of square deviations: 220816475475.11792
[2025-10-09 10:42:56] 2025-10-09 14:41:50,992 | INFO     | sum of deviations: -515249202053.764
[2025-10-09 10:42:56] 2025-10-09 14:41:50,993 | INFO     | mean x: 1759993618.6774917
[2025-10-09 10:42:56] 2025-10-09 14:41:50,993 | INFO     | mean y: 2543766.83762598
[2025-10-09 10:42:56] 2025-10-09 14:41:50,993 | INFO     | -- intersect: 4109281299.40674
[2025-10-09 10:42:56] 2025-10-09 14:41:50,993 | INFO     | intersect: 4109281299.40674
[2025-10-09 10:42:56] 2025-10-09 14:41:50,994 | INFO     | chi2: 3.0973698280268778
[2025-10-09 10:42:56] 2025-10-09 14:41:50,995 | INFO     | current chi2=3.0973698280268778 (change=0.37023484886691743 %)
[2025-10-09 10:42:56] 2025-10-09 14:41:50,995 | INFO     | left removable region: 20
[2025-10-09 10:42:56] 2025-10-09 14:41:50,996 | INFO     | sum of square deviations: 205601519664.00803
[2025-10-09 10:42:56] 2025-10-09 14:41:51,231 | INFO     | sum of deviations: -264463936354.79343
[2025-10-09 10:42:56] 2025-10-09 14:41:51,314 | INFO     | mean x: 1759993588.1823394
[2025-10-09 10:42:56] 2025-10-09 14:41:51,315 | INFO     | mean y: 2548633.5458715595
[2025-10-09 10:42:56] 2025-10-09 14:41:51,315 | INFO     | -- intersect: 2266417271.533278
[2025-10-09 10:42:56] 2025-10-09 14:41:51,315 | INFO     | intersect: 2266417271.533278
[2025-10-09 10:42:56] 2025-10-09 14:41:51,316 | INFO     | chi2: 0.6154964730158563
[2025-10-09 10:42:56] 2025-10-09 14:41:51,317 | INFO     | -- intersect: 2266417271.533278
[2025-10-09 10:42:56] 2025-10-09 14:41:51,317 | INFO     | current memory leak: -1.29 B/s (using 872 data points, chi2=0.62)
[2025-10-09 10:42:56] 2025-10-09 14:41:51,426 | INFO     | could have reported an average CPU frequency of 2900 MHz (33 samples)
[2025-10-09 10:42:56] 2025-10-09 14:41:51,427 | INFO     | ..............................
[2025-10-09 10:42:56] 2025-10-09 14:41:51,427 | INFO     | . Timing measurements:
[2025-10-09 10:42:56] 2025-10-09 14:41:51,427 | INFO     | . get job = 0 s
[2025-10-09 10:42:56] 2025-10-09 14:41:51,427 | INFO     | . initial setup = 4 s
[2025-10-09 10:42:56] 2025-10-09 14:41:51,427 | INFO     | . payload setup = 15 s
[2025-10-09 10:42:56] 2025-10-09 14:41:51,428 | INFO     | . stage-in = 0 s
[2025-10-09 10:42:56] 2025-10-09 14:41:51,428 | INFO     | . payload execution = 55035 s
[2025-10-09 10:42:56] 2025-10-09 14:41:51,428 | INFO     | . stage-out = 12 s
[2025-10-09 10:42:56] 2025-10-09 14:41:51,428 | INFO     | . log creation = 3 s
[2025-10-09 10:42:56] 2025-10-09 14:41:51,428 | INFO     | ..............................
[2025-10-09 10:42:56] 2025-10-09 14:41:53,991 | INFO     | 
[2025-10-09 10:42:56] 2025-10-09 14:41:53,992 | INFO     | job summary report
[2025-10-09 10:42:56] 2025-10-09 14:41:53,992 | INFO     | --------------------------------------------------
[2025-10-09 10:42:56] 2025-10-09 14:41:53,992 | INFO     | PanDA job id: 6835982211
[2025-10-09 10:42:56] 2025-10-09 14:41:54,031 | INFO     | task id: 46676269
[2025-10-09 10:42:56] 2025-10-09 14:41:54,032 | INFO     | errors: (none)
[2025-10-09 10:42:56] 2025-10-09 14:41:54,032 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-09 10:42:56] 2025-10-09 14:41:54,032 | INFO     | pilot state: finished 
[2025-10-09 10:42:56] 2025-10-09 14:41:54,032 | INFO     | transexitcode: 0
[2025-10-09 10:42:56] 2025-10-09 14:41:54,032 | INFO     | exeerrorcode: 0
[2025-10-09 10:42:56] 2025-10-09 14:41:54,032 | INFO     | exeerrordiag: 
[2025-10-09 10:42:56] 2025-10-09 14:41:54,033 | INFO     | exitcode: 0
[2025-10-09 10:42:56] 2025-10-09 14:41:54,033 | INFO     | exitmsg: OK
[2025-10-09 10:42:56] 2025-10-09 14:41:54,033 | INFO     | cpuconsumptiontime: 80845 s
[2025-10-09 10:42:56] 2025-10-09 14:41:54,033 | INFO     | nevents: 400
[2025-10-09 10:42:56] 2025-10-09 14:41:54,033 | INFO     | neventsw: 0
[2025-10-09 10:42:56] 2025-10-09 14:41:54,033 | INFO     | pid: 833347
[2025-10-09 10:42:56] 2025-10-09 14:41:54,034 | INFO     | pgrp: 833347
[2025-10-09 10:42:56] 2025-10-09 14:41:54,034 | INFO     | corecount: 8
[2025-10-09 10:42:56] 2025-10-09 14:41:54,034 | INFO     | event service: False
[2025-10-09 10:42:56] 2025-10-09 14:41:54,034 | INFO     | sizes: {0: 2348624, 1: 2348879, 2: 2348879, 13: 2349225, 23: 2349225, 55060: 2396710, 55063: 2396837, 55077: 2405919, 55078: 2405975, 55142: 2406233}
[2025-10-09 10:42:56] 2025-10-09 14:41:54,034 | INFO     | --------------------------------------------------
[2025-10-09 10:42:56] 2025-10-09 14:41:54,034 | INFO     | 
[2025-10-09 10:42:56] 2025-10-09 14:41:54,035 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-09 10:42:56] 2025-10-09 14:41:54,334 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-09 10:42:56] 2025-10-09 14:41:54,334 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-09 10:42:56] 2025-10-09 14:41:54,334 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-09 10:42:56] 2025-10-09 14:41:54,334 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-09 10:42:56] 2025-10-09 14:41:54,334 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-09 10:42:56] 2025-10-09 14:41:54,335 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-09 10:42:56] 2025-10-09 14:41:54,335 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-09 10:42:56] 2025-10-09 14:41:54,335 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-09 10:42:56] 2025-10-09 14:41:54,335 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-09 10:42:56] 2025-10-09 14:41:54,335 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-09 10:42:56] 2025-10-09 14:41:54,335 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-09 10:42:56] 2025-10-09 14:41:54,336 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-09 10:42:56] 2025-10-09 14:41:54,336 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-09 10:42:56] 2025-10-09 14:41:54,336 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-09 10:42:56] 2025-10-09 14:41:54,336 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-09 10:42:56] 2025-10-09 14:41:54,336 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-09 10:42:56] 2025-10-09 14:41:54,336 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-09 10:42:56] 2025-10-09 14:41:54,336 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-09 10:42:56] 2025-10-09 14:41:54,337 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-09 10:42:56] 2025-10-09 14:41:54,337 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-09 10:42:56] 2025-10-09 14:41:54,337 | INFO     | job 6835982211 has completed (purged errors)
[2025-10-09 10:42:56] 2025-10-09 14:41:54,337 | INFO     | overall cleanup function is called
[2025-10-09 10:42:56] 2025-10-09 14:41:55,385 | INFO     | --- collectZombieJob: --- 10, [833347]
[2025-10-09 10:42:56] 2025-10-09 14:41:55,386 | INFO     | zombie collector waiting for pid 833347
[2025-10-09 10:42:56] 2025-10-09 14:41:55,386 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-09 10:42:56] 2025-10-09 14:41:55,386 | INFO     | collected zombie processes
[2025-10-09 10:42:56] 2025-10-09 14:41:55,386 | INFO     | will attempt to kill all subprocesses of pid=833347
[2025-10-09 10:42:56] 2025-10-09 14:41:58,586 | INFO     | PID=820253 has CPU usage=4.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-09 10:42:56] 2025-10-09 14:41:58,587 | INFO     | .. there are 41 such processes running
[2025-10-09 10:42:56] 2025-10-09 14:41:58,732 | INFO     | process IDs to be killed: [833347] (in reverse order)
[2025-10-09 10:42:56] 2025-10-09 14:42:00,484 | WARNING  | found no corresponding commands to process id(s)
[2025-10-09 10:42:56] 2025-10-09 14:42:00,484 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-09 10:42:56] 2025-10-09 14:42:00,528 | INFO     | did not find any defunct processes belonging to 833347
[2025-10-09 10:42:56] 2025-10-09 14:42:00,555 | INFO     | did not find any defunct processes belonging to 833347
[2025-10-09 10:42:56] 2025-10-09 14:42:00,555 | INFO     | ready for new job
[2025-10-09 10:42:56] 2025-10-09 14:42:00,556 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-09 10:42:56] 2025-10-09 14:42:00,560 | INFO     | ***************************************
[2025-10-09 10:42:56] 2025-10-09 14:42:00,560 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-09 10:42:56] 2025-10-09 14:42:00,560 | INFO     | ***************************************
[2025-10-09 10:42:56] 2025-10-09 14:42:00,561 | INFO     | 
[2025-10-09 10:42:56] 2025-10-09 14:42:00,562 | INFO     | architecture information:
[2025-10-09 10:42:56] 2025-10-09 14:42:00,572 | INFO     | executing command: cat /etc/os-release
[2025-10-09 10:42:56] 2025-10-09 14:42:00,837 | INFO     | cat /etc/os-release:
[2025-10-09 10:42:56] NAME="CentOS Linux"
[2025-10-09 10:42:56] VERSION="7 (Core)"
[2025-10-09 10:42:56] ID="centos"
[2025-10-09 10:42:56] ID_LIKE="rhel fedora"
[2025-10-09 10:42:56] VERSION_ID="7"
[2025-10-09 10:42:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-09 10:42:56] ANSI_COLOR="0;31"
[2025-10-09 10:42:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-09 10:42:56] HOME_URL="https://www.centos.org/"
[2025-10-09 10:42:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-09 10:42:56] 
[2025-10-09 10:42:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-09 10:42:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-09 10:42:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-09 10:42:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-09 10:42:56] 
[2025-10-09 10:42:56] 2025-10-09 14:42:00,837 | INFO     | ***************************************
[2025-10-09 10:42:56] 2025-10-09 14:42:01,351 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-09 10:42:56] 2025-10-09 14:42:01,507 | INFO     | sufficient remaining disk space (53289680896 B)
[2025-10-09 10:42:56] 2025-10-09 14:42:01,507 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-09 10:42:56] 2025-10-09 14:42:01,508 | INFO     | current server update state: UPDATING_FINAL
[2025-10-09 10:42:56] 2025-10-09 14:42:01,508 | INFO     | update_server=False
[2025-10-09 10:42:56] 2025-10-09 14:42:01,551 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-09 10:42:56] 2025-10-09 14:42:01,552 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-09 10:42:56] 2025-10-09 14:42:01,552 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-09 10:42:56] 2025-10-09 14:42:01,885 | INFO     | all job control threads have been joined
[2025-10-09 10:42:56] 2025-10-09 14:42:02,003 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-09 10:42:56] 2025-10-09 14:42:02,004 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-09 10:42:56] 2025-10-09 14:42:02,004 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-09 10:42:56] 2025-10-09 14:42:02,004 | INFO     | will abort loop
[2025-10-09 10:42:56] 2025-10-09 14:42:02,562 | INFO     | [job] retrieve thread has finished
[2025-10-09 10:42:56] 2025-10-09 14:42:02,696 | INFO     | all data control threads have been joined
[2025-10-09 10:42:56] 2025-10-09 14:42:02,880 | INFO     | all payload control threads have been joined
[2025-10-09 10:42:56] 2025-10-09 14:42:02,898 | INFO     | [job] control thread has finished
[2025-10-09 10:42:56] 2025-10-09 14:42:03,000 | INFO     | [payload] execute_payloads thread has finished
[2025-10-09 10:42:56] 2025-10-09 14:42:03,017 | INFO     | [job] job monitor thread has finished
[2025-10-09 10:42:56] 2025-10-09 14:42:03,033 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-09 10:42:56] 2025-10-09 14:42:03,041 | INFO     | [job] validate thread has finished
[2025-10-09 10:42:56] 2025-10-09 14:42:03,048 | INFO     | [payload] validate_pre thread has finished
[2025-10-09 10:42:56] 2025-10-09 14:42:03,064 | INFO     | [data] copytool_in thread has finished
[2025-10-09 10:42:56] 2025-10-09 14:42:03,182 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-09 10:42:56] 2025-10-09 14:42:03,196 | INFO     | [job] create_data_payload thread has finished
[2025-10-09 10:42:56] 2025-10-09 14:42:03,303 | INFO     | [payload] failed_post thread has finished
[2025-10-09 10:42:56] 2025-10-09 14:42:03,567 | INFO     | [data] copytool_out thread has finished
[2025-10-09 10:42:56] 2025-10-09 14:42:03,752 | INFO     | [data] control thread has finished
[2025-10-09 10:42:56] 2025-10-09 14:42:03,768 | INFO     | [payload] validate_post thread has finished
[2025-10-09 10:42:56] 2025-10-09 14:42:03,886 | INFO     | [payload] control thread has finished
[2025-10-09 10:42:56] 2025-10-09 14:42:04,198 | INFO     | [job] queue monitor thread has finished
[2025-10-09 10:42:56] 2025-10-09 14:42:05,570 | INFO     | [data] queue_monitor thread has finished
[2025-10-09 10:42:56] 2025-10-09 14:42:05,748 | INFO     | [monitor] cgroup control has ended
[2025-10-09 10:42:56] 2025-10-09 14:42:06,706 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140304578631488)>', '<ExcThread(monitor, started 140304082523904)>']
[2025-10-09 10:42:56] 2025-10-09 14:42:11,732 | INFO     | all workflow threads have been joined
[2025-10-09 10:42:56] 2025-10-09 14:42:11,733 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-09 10:42:56] 2025-10-09 14:42:11,733 | INFO     | traces error code: 0
[2025-10-09 10:42:56] 2025-10-09 14:42:11,733 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-09 10:42:56] 2025-10-09 14:42:33,409 | INFO     | PID=820253 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-09 10:42:56] 2025-10-09 14:42:33,410 | INFO     | .. there are 41 such processes running
[2025-10-09 10:42:56] 2025-10-09 14:42:33,411 | INFO     | found 0 job(s) in 20 queues
[2025-10-09 10:42:56] 2025-10-09 14:42:33,411 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-09 10:42:56] 2025-10-09 14:42:33,411 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-09 10:42:56] 2025-10-09 14:42:33,412 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-09 10:42:56] 2025-10-09 14:42:33,412 | INFO     | [monitor] control thread has ended
[2025-10-09 10:42:56] 2025-10-09 14:42:33,634 [wrapper] ==== pilot stdout END ====
[2025-10-09 10:42:56] 2025-10-09 14:42:33,665 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-09 10:42:56] 2025-10-09 14:42:33,686 [wrapper] pilotpid: 820253
[2025-10-09 10:42:56] 2025-10-09 14:42:33,722 [wrapper] Pilot exit status: 0
[2025-10-09 10:42:56] 2025-10-09 14:42:33,865 [wrapper] pandaids: 6835982211
[2025-10-09 10:42:56] 2025-10-09 14:42:34,270 [wrapper] cleanup supervisor_pilot 1653426 820254
[2025-10-09 10:42:56] 2025-10-09 14:42:34,298 [wrapper] Test setup, not cleaning
[2025-10-09 10:42:56] 2025-10-09 14:42:34,407 [wrapper] apfmon messages muted
[2025-10-09 10:42:56] 2025-10-09 14:42:34,493 [wrapper] ==== wrapper stdout END ====
[2025-10-09 10:42:56] 2025-10-09 14:42:34,557 [wrapper] ==== wrapper stderr END ====
[2025-10-09 10:42:56]  *** Error codes and diagnostics ***
[2025-10-09 10:42:56]     "exeErrorCode": 0,
[2025-10-09 10:42:56]     "exeErrorDiag": "",
[2025-10-09 10:42:56]     "pilotErrorCode": 0,
[2025-10-09 10:42:56]     "pilotErrorDiag": "",
[2025-10-09 10:42:56]  *** Listing of results directory ***
[2025-10-09 10:42:56] total 416816
[2025-10-09 10:42:56] -rw-r--r--. 1 boincer umatlas    557409 Oct  8 05:48 pilot3.tar.gz
[2025-10-09 10:42:56] -rw-r--r--. 1 boincer umatlas      5112 Oct  8 06:01 queuedata.json
[2025-10-09 10:42:56] -rwx------. 1 boincer umatlas     36292 Oct  8 06:02 runpilot2-wrapper.sh
[2025-10-09 10:42:56] -rw-r--r--. 1 boincer umatlas       100 Oct  8 19:21 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-09 10:42:56] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  8 19:21 run_atlas
[2025-10-09 10:42:56] -rw-r--r--. 1 boincer umatlas       105 Oct  8 19:21 job.xml
[2025-10-09 10:42:56] -rw-r--r--. 2 boincer umatlas 218058112 Oct  8 19:21 EVNT.46676267._000153.pool.root.1
[2025-10-09 10:42:56] -rw-r--r--. 2 boincer umatlas     15120 Oct  8 19:21 start_atlas.sh
[2025-10-09 10:42:56] drwxrwx--x. 2 boincer umatlas      4096 Oct  8 19:21 shared
[2025-10-09 10:42:56] -rw-r--r--. 2 boincer umatlas    569685 Oct  8 19:21 input.tar.gz
[2025-10-09 10:42:56] -rw-r--r--. 1 boincer umatlas         0 Oct  8 19:21 boinc_lockfile
[2025-10-09 10:42:56] -rw-r--r--. 1 boincer umatlas      2547 Oct  8 19:21 pandaJob.out
[2025-10-09 10:42:56] -rw-------. 1 boincer umatlas    979298 Oct  8 19:22 agis_schedconf.cvmfs.json
[2025-10-09 10:42:56] drwx------. 5 boincer umatlas      4096 Oct  8 19:22 pilot3
[2025-10-09 10:42:56] -rw-------. 1 boincer umatlas 191753543 Oct  9 10:37 HITS.46676269._004698.pool.root.1
[2025-10-09 10:42:56] -rw-r--r--. 1 boincer umatlas       531 Oct  9 10:37 boinc_task_state.xml
[2025-10-09 10:42:56] -rw-r--r--. 1 boincer umatlas      6524 Oct  9 10:40 init_data.xml
[2025-10-09 10:42:56] -rw-------. 1 boincer umatlas      1043 Oct  9 10:40 memory_monitor_summary.json
[2025-10-09 10:42:56] -rw-------. 1 boincer umatlas   1560401 Oct  9 10:40 agis_ddmendpoints.agis.ALL.json
[2025-10-09 10:42:56] -rw-------. 1 boincer umatlas    889715 Oct  9 10:40 log.46676269._004698.job.log.tgz.1
[2025-10-09 10:42:56] -rw-------. 1 boincer umatlas      7820 Oct  9 10:41 heartbeat.json
[2025-10-09 10:42:56] -rw-------. 1 boincer umatlas        95 Oct  9 10:42 pilot_heartbeat.json
[2025-10-09 10:42:56] -rw-------. 1 boincer umatlas       822 Oct  9 10:42 pilotlog.txt
[2025-10-09 10:42:56] -rw-------. 1 boincer umatlas   5667937 Oct  9 10:42 log.46676269._004698.job.log.1
[2025-10-09 10:42:56] -rw-r--r--. 1 boincer umatlas      8192 Oct  9 10:42 boinc_mmap_file
[2025-10-09 10:42:56] -rw-------. 1 boincer umatlas       357 Oct  9 10:42 output.list
[2025-10-09 10:42:56] -rw-r--r--. 1 boincer umatlas       620 Oct  9 10:42 runtime_log
[2025-10-09 10:42:56] -rw-r--r--. 1 boincer umatlas        28 Oct  9 10:42 wrapper_checkpoint.txt
[2025-10-09 10:42:56] -rw-------. 1 boincer umatlas   6574080 Oct  9 10:42 result.tar.gz
[2025-10-09 10:42:56] -rw-r--r--. 1 boincer umatlas      8704 Oct  9 10:42 runtime_log.err
[2025-10-09 10:42:56] -rw-------. 1 boincer umatlas       658 Oct  9 10:42 EM3MDmqAgQ8n9Rq4apOajLDm4fhM0noT9bVof3QYDmnRMMDmGUJCom.diag
[2025-10-09 10:42:56] -rw-r--r--. 1 boincer umatlas     21189 Oct  9 10:42 stderr.txt
[2025-10-09 10:42:56] HITS file was successfully produced:
[2025-10-09 10:42:56] -rw-------. 1 boincer umatlas 191753543 Oct  9 10:37 shared/HITS.pool.root.1
[2025-10-09 10:42:56]  *** Contents of shared directory: ***
[2025-10-09 10:42:56] total 407208
[2025-10-09 10:42:56] -rw-r--r--. 2 boincer umatlas 218058112 Oct  8 19:21 ATLAS.root_0
[2025-10-09 10:42:56] -rw-r--r--. 2 boincer umatlas     15120 Oct  8 19:21 start_atlas.sh
[2025-10-09 10:42:56] -rw-r--r--. 2 boincer umatlas    569685 Oct  8 19:21 input.tar.gz
[2025-10-09 10:42:56] -rw-------. 1 boincer umatlas 191753543 Oct  9 10:37 HITS.pool.root.1
[2025-10-09 10:42:56] -rw-------. 1 boincer umatlas   6574080 Oct  9 10:42 result.tar.gz
10:42:58 (812989): run_atlas exited; CPU time 83507.346183
10:42:58 (812989): called boinc_finish(0)

</stderr_txt>
]]>

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