Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
06:39:56 (3326931): wrapper (7.7.26015): starting
06:39:56 (3326931): wrapper: running run_atlas (--nthreads 8)
[2025-10-08 06:39:56] Arguments: --nthreads 8
[2025-10-08 06:39:56] Threads: 8
[2025-10-08 06:39:56] Checking for CVMFS
[2025-10-08 06:39:58] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 06:39:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 06:39:59] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 06:40:01] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 06:40:01] 2.13.2.0 184081 101749 401948 151469 0 71 32799747 39288832 20872 16776704 0 129368373 99.512 169356373 30518 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-08 06:40:01] CVMFS is ok
[2025-10-08 06:40:01] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-08 06:40:01] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-08 06:40:01] Further information can be found at the LHC@home message board.
[2025-10-08 06:40:01] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 06:40:01] Checking for apptainer binary...
[2025-10-08 06:40:01] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 06:40:01] Running /usr/bin/apptainer --version
[2025-10-08 06:40:01] apptainer version 1.4.3-1.el9
[2025-10-08 06:40:01] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 06:40:03] c-211-20.aglt2.org
[2025-10-08 06:40:03] apptainer works
[2025-10-08 06:40:03] Set ATHENA_PROC_NUMBER=8
[2025-10-08 06:40:03] Set ATHENA_CORE_NUMBER=8
[2025-10-08 06:40:03] Starting ATLAS job with PandaID=6835981780
[2025-10-08 06:40:03] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-08 22:08:35]  *** The last 200 lines of the pilot log: ***
[2025-10-08 22:08:35] 2025-10-09 02:07:55,511 | INFO     | sum of deviations: 421463516759.397
[2025-10-08 22:08:35] 2025-10-09 02:07:55,512 | INFO     | mean x: 1759947875.8843613
[2025-10-08 22:08:35] 2025-10-09 02:07:55,513 | INFO     | mean y: 2502966.718061674
[2025-10-08 22:08:35] 2025-10-09 02:07:55,513 | INFO     | -- intersect: -3192894789.136055
[2025-10-08 22:08:35] 2025-10-09 02:07:55,513 | INFO     | intersect: -3192894789.136055
[2025-10-08 22:08:35] 2025-10-09 02:07:55,514 | INFO     | chi2: 4.183354278109516
[2025-10-08 22:08:35] 2025-10-09 02:07:55,561 | INFO     | monitor loop #2537: job 0:6835981780 is in state 'finished'
[2025-10-08 22:08:35] 2025-10-09 02:07:55,562 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 22:08:35] 2025-10-09 02:07:55,571 | INFO     | sum of square deviations: 228318208593.6568
[2025-10-08 22:08:35] 2025-10-09 02:07:55,640 | INFO     | time since job start (55605s) is within the limit (172800.0s)
[2025-10-08 22:08:35] 2025-10-09 02:07:55,861 | INFO     | sum of deviations: 541387906361.562
[2025-10-08 22:08:35] 2025-10-09 02:07:55,861 | INFO     | mean x: 1759947723.3842747
[2025-10-08 22:08:35] 2025-10-09 02:07:55,861 | INFO     | mean y: 2507745.8283499447
[2025-10-08 22:08:35] 2025-10-09 02:07:55,897 | INFO     | -- intersect: -4170678524.0611258
[2025-10-08 22:08:35] 2025-10-09 02:07:55,898 | INFO     | intersect: -4170678524.0611258
[2025-10-08 22:08:35] 2025-10-09 02:07:55,899 | INFO     | chi2: 2.616056973314504
[2025-10-08 22:08:35] 2025-10-09 02:07:55,899 | INFO     | current chi2=2.616056973314504 (change=37.46508664103112 %)
[2025-10-08 22:08:35] 2025-10-09 02:07:55,900 | INFO     | sum of square deviations: 224546441128.72266
[2025-10-08 22:08:35] 2025-10-09 02:07:56,068 | INFO     | sum of deviations: 536952263934.7464
[2025-10-08 22:08:35] 2025-10-09 02:07:56,069 | INFO     | mean x: 1759947570.8830736
[2025-10-08 22:08:35] 2025-10-09 02:07:56,069 | INFO     | mean y: 2507566.4832962137
[2025-10-08 22:08:35] 2025-10-09 02:07:56,069 | INFO     | -- intersect: -4206010848.869331
[2025-10-08 22:08:35] 2025-10-09 02:07:56,069 | INFO     | intersect: -4206010848.869331
[2025-10-08 22:08:35] 2025-10-09 02:07:56,070 | INFO     | chi2: 2.615906320551517
[2025-10-08 22:08:35] 2025-10-09 02:07:56,071 | INFO     | current chi2=2.615906320551517 (change=0.005758772248602617 %)
[2025-10-08 22:08:35] 2025-10-09 02:07:56,071 | INFO     | right removable region: 897
[2025-10-08 22:08:35] 2025-10-09 02:07:56,072 | INFO     | sum of square deviations: 228318106358.11557
[2025-10-08 22:08:35] 2025-10-09 02:07:56,096 | INFO     | sum of deviations: 188704036492.12976
[2025-10-08 22:08:35] 2025-10-09 02:07:56,096 | INFO     | mean x: 1759948028.3864894
[2025-10-08 22:08:35] 2025-10-09 02:07:56,096 | INFO     | mean y: 2512265.0598006644
[2025-10-08 22:08:35] 2025-10-09 02:07:56,096 | INFO     | -- intersect: -1452078009.3181083
[2025-10-08 22:08:35] 2025-10-09 02:07:56,096 | INFO     | intersect: -1452078009.3181083
[2025-10-08 22:08:35] 2025-10-09 02:07:56,098 | INFO     | chi2: 1.716756102439839
[2025-10-08 22:08:35] 2025-10-09 02:07:56,098 | INFO     | current chi2=1.716756102439839 (change=58.96221098406106 %)
[2025-10-08 22:08:35] 2025-10-09 02:07:56,099 | INFO     | sum of square deviations: 224546347311.6403
[2025-10-08 22:08:35] 2025-10-09 02:07:56,122 | INFO     | sum of deviations: 147400266251.44208
[2025-10-08 22:08:35] 2025-10-09 02:07:56,122 | INFO     | mean x: 1759948180.887528
[2025-10-08 22:08:35] 2025-10-09 02:07:56,122 | INFO     | mean y: 2513933.816258352
[2025-10-08 22:08:35] 2025-10-09 02:07:56,122 | INFO     | -- intersect: -1152779098.3679922
[2025-10-08 22:08:35] 2025-10-09 02:07:56,122 | INFO     | intersect: -1152779098.3679922
[2025-10-08 22:08:35] 2025-10-09 02:07:56,124 | INFO     | chi2: 1.6525628393128131
[2025-10-08 22:08:35] 2025-10-09 02:07:56,124 | INFO     | current chi2=1.6525628393128131 (change=3.739218578328918 %)
[2025-10-08 22:08:35] 2025-10-09 02:07:56,124 | INFO     | left removable region: 20
[2025-10-08 22:08:35] 2025-10-09 02:07:56,125 | INFO     | sum of square deviations: 209158756278.55984
[2025-10-08 22:08:35] 2025-10-09 02:07:56,150 | INFO     | sum of deviations: 259006680443.74576
[2025-10-08 22:08:35] 2025-10-09 02:07:56,150 | INFO     | mean x: 1759948150.3797035
[2025-10-08 22:08:35] 2025-10-09 02:07:56,150 | INFO     | mean y: 2518891.637400228
[2025-10-08 22:08:35] 2025-10-09 02:07:56,150 | INFO     | -- intersect: -2176870278.0699725
[2025-10-08 22:08:35] 2025-10-09 02:07:56,150 | INFO     | intersect: -2176870278.0699725
[2025-10-08 22:08:35] 2025-10-09 02:07:56,152 | INFO     | chi2: 0.055365205181889206
[2025-10-08 22:08:35] 2025-10-09 02:07:56,152 | INFO     | -- intersect: -2176870278.0699725
[2025-10-08 22:08:35] 2025-10-09 02:07:56,152 | INFO     | current memory leak: 1.24 B/s (using 877 data points, chi2=0.06)
[2025-10-08 22:08:35] 2025-10-09 02:07:56,153 | INFO     | could have reported an average CPU frequency of 2900 MHz (33 samples)
[2025-10-08 22:08:35] 2025-10-09 02:07:56,153 | INFO     | ..............................
[2025-10-08 22:08:35] 2025-10-09 02:07:56,154 | INFO     | . Timing measurements:
[2025-10-08 22:08:35] 2025-10-09 02:07:56,154 | INFO     | . get job = 0 s
[2025-10-08 22:08:35] 2025-10-09 02:07:56,154 | INFO     | . initial setup = 5 s
[2025-10-08 22:08:35] 2025-10-09 02:07:56,154 | INFO     | . payload setup = 35 s
[2025-10-08 22:08:35] 2025-10-09 02:07:56,154 | INFO     | . stage-in = 0 s
[2025-10-08 22:08:35] 2025-10-09 02:07:56,154 | INFO     | . payload execution = 55426 s
[2025-10-08 22:08:35] 2025-10-09 02:07:56,154 | INFO     | . stage-out = 10 s
[2025-10-08 22:08:35] 2025-10-09 02:07:56,155 | INFO     | . log creation = 2 s
[2025-10-08 22:08:35] 2025-10-09 02:07:56,155 | INFO     | ..............................
[2025-10-08 22:08:35] 2025-10-09 02:07:56,417 | INFO     | 
[2025-10-08 22:08:35] 2025-10-09 02:07:56,418 | INFO     | job summary report
[2025-10-08 22:08:35] 2025-10-09 02:07:56,418 | INFO     | --------------------------------------------------
[2025-10-08 22:08:35] 2025-10-09 02:07:56,418 | INFO     | PanDA job id: 6835981780
[2025-10-08 22:08:35] 2025-10-09 02:07:56,418 | INFO     | task id: 46676269
[2025-10-08 22:08:35] 2025-10-09 02:07:56,418 | INFO     | errors: (none)
[2025-10-08 22:08:35] 2025-10-09 02:07:56,418 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-08 22:08:35] 2025-10-09 02:07:56,418 | INFO     | pilot state: finished 
[2025-10-08 22:08:35] 2025-10-09 02:07:56,419 | INFO     | transexitcode: 0
[2025-10-08 22:08:35] 2025-10-09 02:07:56,419 | INFO     | exeerrorcode: 0
[2025-10-08 22:08:35] 2025-10-09 02:07:56,419 | INFO     | exeerrordiag: 
[2025-10-08 22:08:35] 2025-10-09 02:07:56,419 | INFO     | exitcode: 0
[2025-10-08 22:08:35] 2025-10-09 02:07:56,419 | INFO     | exitmsg: OK
[2025-10-08 22:08:35] 2025-10-09 02:07:56,419 | INFO     | cpuconsumptiontime: 77407 s
[2025-10-08 22:08:35] 2025-10-09 02:07:56,419 | INFO     | nevents: 400
[2025-10-08 22:08:35] 2025-10-09 02:07:56,420 | INFO     | neventsw: 0
[2025-10-08 22:08:35] 2025-10-09 02:07:56,420 | INFO     | pid: 3354058
[2025-10-08 22:08:35] 2025-10-09 02:07:56,420 | INFO     | pgrp: 3354058
[2025-10-08 22:08:35] 2025-10-09 02:07:56,420 | INFO     | corecount: 8
[2025-10-08 22:08:35] 2025-10-09 02:07:56,420 | INFO     | event service: False
[2025-10-08 22:08:35] 2025-10-09 02:07:56,420 | INFO     | sizes: {0: 2348023, 1: 2348708, 2: 2348907, 14: 2348907, 25: 2348935, 28: 2349225, 36: 2349381, 55468: 2397007, 55469: 2397006, 55482: 2406060, 55486: 2406116, 555
[2025-10-08 22:08:35] 2025-10-09 02:07:56,420 | INFO     | --------------------------------------------------
[2025-10-08 22:08:35] 2025-10-09 02:07:56,421 | INFO     | 
[2025-10-08 22:08:35] 2025-10-09 02:07:56,421 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-08 22:08:35] 2025-10-09 02:07:56,693 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-08 22:08:35] 2025-10-09 02:07:56,693 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-08 22:08:35] 2025-10-09 02:07:56,693 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-08 22:08:35] 2025-10-09 02:07:56,693 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-08 22:08:35] 2025-10-09 02:07:56,693 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-08 22:08:35] 2025-10-09 02:07:56,694 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-08 22:08:35] 2025-10-09 02:07:56,694 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-08 22:08:35] 2025-10-09 02:07:56,694 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-08 22:08:35] 2025-10-09 02:07:56,694 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-08 22:08:35] 2025-10-09 02:07:56,694 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-08 22:08:35] 2025-10-09 02:07:56,695 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-08 22:08:35] 2025-10-09 02:07:56,695 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-08 22:08:35] 2025-10-09 02:07:56,695 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-08 22:08:35] 2025-10-09 02:07:56,695 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-08 22:08:35] 2025-10-09 02:07:56,695 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-08 22:08:35] 2025-10-09 02:07:56,695 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-08 22:08:35] 2025-10-09 02:07:56,695 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-08 22:08:35] 2025-10-09 02:07:56,696 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-08 22:08:35] 2025-10-09 02:07:56,696 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-08 22:08:35] 2025-10-09 02:07:56,696 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-08 22:08:35] 2025-10-09 02:07:56,712 | INFO     | job 6835981780 has completed (purged errors)
[2025-10-08 22:08:35] 2025-10-09 02:07:56,712 | INFO     | overall cleanup function is called
[2025-10-08 22:08:35] 2025-10-09 02:07:57,723 | INFO     | --- collectZombieJob: --- 10, [3354058]
[2025-10-08 22:08:35] 2025-10-09 02:07:57,723 | INFO     | zombie collector waiting for pid 3354058
[2025-10-08 22:08:35] 2025-10-09 02:07:57,724 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-08 22:08:35] 2025-10-09 02:07:57,724 | INFO     | collected zombie processes
[2025-10-08 22:08:35] 2025-10-09 02:07:57,724 | INFO     | will attempt to kill all subprocesses of pid=3354058
[2025-10-08 22:08:35] 2025-10-09 02:08:00,393 | INFO     | process IDs to be killed: [3354058] (in reverse order)
[2025-10-08 22:08:35] 2025-10-09 02:08:01,529 | WARNING  | found no corresponding commands to process id(s)
[2025-10-08 22:08:35] 2025-10-09 02:08:01,531 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-08 22:08:35] 2025-10-09 02:08:01,654 | INFO     | did not find any defunct processes belonging to 3354058
[2025-10-08 22:08:35] 2025-10-09 02:08:01,723 | INFO     | did not find any defunct processes belonging to 3354058
[2025-10-08 22:08:35] 2025-10-09 02:08:01,725 | INFO     | ready for new job
[2025-10-08 22:08:35] 2025-10-09 02:08:01,726 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-08 22:08:35] 2025-10-09 02:08:01,773 | INFO     | ***************************************
[2025-10-08 22:08:35] 2025-10-09 02:08:01,773 | INFO     | ***  PanDA Pilot version 3.11.0.29  ***
[2025-10-08 22:08:35] 2025-10-09 02:08:01,773 | INFO     | ***************************************
[2025-10-08 22:08:35] 2025-10-09 02:08:01,773 | INFO     | 
[2025-10-08 22:08:35] 2025-10-09 02:08:01,775 | INFO     | architecture information:
[2025-10-08 22:08:35] 2025-10-09 02:08:01,784 | INFO     | executing command: cat /etc/os-release
[2025-10-08 22:08:35] 2025-10-09 02:08:01,985 | INFO     | cat /etc/os-release:
[2025-10-08 22:08:35] NAME="CentOS Linux"
[2025-10-08 22:08:35] VERSION="7 (Core)"
[2025-10-08 22:08:35] ID="centos"
[2025-10-08 22:08:35] ID_LIKE="rhel fedora"
[2025-10-08 22:08:35] VERSION_ID="7"
[2025-10-08 22:08:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-08 22:08:35] ANSI_COLOR="0;31"
[2025-10-08 22:08:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-08 22:08:35] HOME_URL="https://www.centos.org/"
[2025-10-08 22:08:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-08 22:08:35] 
[2025-10-08 22:08:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-08 22:08:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-08 22:08:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-08 22:08:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-08 22:08:35] 
[2025-10-08 22:08:35] 2025-10-09 02:08:01,985 | INFO     | ***************************************
[2025-10-08 22:08:35] 2025-10-09 02:08:02,491 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-08 22:08:35] 2025-10-09 02:08:02,727 | INFO     | sufficient remaining disk space (53089402880 B)
[2025-10-08 22:08:35] 2025-10-09 02:08:02,728 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-08 22:08:35] 2025-10-09 02:08:02,728 | INFO     | current server update state: UPDATING_FINAL
[2025-10-08 22:08:35] 2025-10-09 02:08:02,728 | INFO     | update_server=False
[2025-10-08 22:08:35] 2025-10-09 02:08:02,728 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-08 22:08:35] 2025-10-09 02:08:02,745 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-08 22:08:35] 2025-10-09 02:08:02,916 | INFO     | all payload control threads have been joined
[2025-10-08 22:08:35] 2025-10-09 02:08:03,225 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-08 22:08:35] 2025-10-09 02:08:03,226 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-08 22:08:35] 2025-10-09 02:08:03,226 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-08 22:08:35] 2025-10-09 02:08:03,226 | INFO     | will abort loop
[2025-10-08 22:08:35] 2025-10-09 02:08:03,471 | INFO     | [monitor] cgroup control has ended
[2025-10-08 22:08:35] 2025-10-09 02:08:03,599 | INFO     | all data control threads have been joined
[2025-10-08 22:08:35] 2025-10-09 02:08:03,734 | INFO     | [job] retrieve thread has finished
[2025-10-08 22:08:35] 2025-10-09 02:08:03,925 | INFO     | [payload] control thread has finished
[2025-10-08 22:08:35] 2025-10-09 02:08:03,931 | INFO     | [payload] execute_payloads thread has finished
[2025-10-08 22:08:35] 2025-10-09 02:08:04,009 | INFO     | all job control threads have been joined
[2025-10-08 22:08:35] 2025-10-09 02:08:04,102 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-08 22:08:35] 2025-10-09 02:08:04,240 | INFO     | [job] job monitor thread has finished
[2025-10-08 22:08:35] 2025-10-09 02:08:04,605 | INFO     | [data] control thread has finished
[2025-10-08 22:08:35] 2025-10-09 02:08:04,694 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-08 22:08:35] 2025-10-09 02:08:04,752 | INFO     | [data] copytool_out thread has finished
[2025-10-08 22:08:35] 2025-10-09 02:08:04,980 | INFO     | [job] validate thread has finished
[2025-10-08 22:08:35] 2025-10-09 02:08:05,016 | INFO     | [job] control thread has finished
[2025-10-08 22:08:35] 2025-10-09 02:08:05,226 | INFO     | [job] create_data_payload thread has finished
[2025-10-08 22:08:35] 2025-10-09 02:08:05,232 | INFO     | [payload] validate_pre thread has finished
[2025-10-08 22:08:35] 2025-10-09 02:08:05,248 | INFO     | [data] copytool_in thread has finished
[2025-10-08 22:08:35] 2025-10-09 02:08:05,299 | INFO     | [payload] validate_post thread has finished
[2025-10-08 22:08:35] 2025-10-09 02:08:05,310 | INFO     | [payload] failed_post thread has finished
[2025-10-08 22:08:35] 2025-10-09 02:08:05,534 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-08 22:08:35] 2025-10-09 02:08:06,579 | INFO     | [job] queue monitor thread has finished
[2025-10-08 22:08:35] 2025-10-09 02:08:08,111 | INFO     | [data] queue_monitor thread has finished
[2025-10-08 22:08:35] 2025-10-09 02:08:10,140 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140185900808000)>', '<ExcThread(monitor, started 140185534699264)>']
[2025-10-08 22:08:35] 2025-10-09 02:08:15,166 | INFO     | all workflow threads have been joined
[2025-10-08 22:08:35] 2025-10-09 02:08:15,170 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-08 22:08:35] 2025-10-09 02:08:15,171 | INFO     | traces error code: 0
[2025-10-08 22:08:35] 2025-10-09 02:08:15,171 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-08 22:08:35] 2025-10-09 02:08:31,962 | INFO     | PID=3338363 has CPU usage=4.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-08 22:08:35] 2025-10-09 02:08:31,976 | INFO     | .. there are 34 such processes running
[2025-10-08 22:08:35] 2025-10-09 02:08:31,976 | INFO     | found 0 job(s) in 20 queues
[2025-10-08 22:08:35] 2025-10-09 02:08:31,976 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-08 22:08:35] 2025-10-09 02:08:31,976 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-08 22:08:35] 2025-10-09 02:08:31,976 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-08 22:08:35] 2025-10-09 02:08:31,977 | INFO     | [monitor] control thread has ended
[2025-10-08 22:08:35] 2025-10-09 02:08:34,138 [wrapper] ==== pilot stdout END ====
[2025-10-08 22:08:35] 2025-10-09 02:08:34,178 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-08 22:08:35] 2025-10-09 02:08:34,231 [wrapper] pilotpid: 3338363
[2025-10-08 22:08:35] 2025-10-09 02:08:34,268 [wrapper] Pilot exit status: 0
[2025-10-08 22:08:35] 2025-10-09 02:08:34,411 [wrapper] pandaids: 6835981780
[2025-10-08 22:08:35] 2025-10-09 02:08:34,512 [wrapper] cleanup supervisor_pilot 2762428 3338364
[2025-10-08 22:08:35] 2025-10-09 02:08:34,516 [wrapper] Test setup, not cleaning
[2025-10-08 22:08:35] 2025-10-09 02:08:34,519 [wrapper] apfmon messages muted
[2025-10-08 22:08:35] 2025-10-09 02:08:34,522 [wrapper] ==== wrapper stdout END ====
[2025-10-08 22:08:35] 2025-10-09 02:08:34,526 [wrapper] ==== wrapper stderr END ====
[2025-10-08 22:08:35]  *** Error codes and diagnostics ***
[2025-10-08 22:08:35]     "exeErrorCode": 0,
[2025-10-08 22:08:35]     "exeErrorDiag": "",
[2025-10-08 22:08:35]     "pilotErrorCode": 0,
[2025-10-08 22:08:35]     "pilotErrorDiag": "",
[2025-10-08 22:08:35]  *** Listing of results directory ***
[2025-10-08 22:08:35] total 423668
[2025-10-08 22:08:35] -rw-r--r--. 1 boincer umatlas    557409 Oct  8 05:48 pilot3.tar.gz
[2025-10-08 22:08:35] -rw-r--r--. 1 boincer umatlas      5112 Oct  8 06:01 queuedata.json
[2025-10-08 22:08:35] -rwx------. 1 boincer umatlas     36292 Oct  8 06:02 runpilot2-wrapper.sh
[2025-10-08 22:08:35] -rw-r--r--. 1 boincer umatlas       100 Oct  8 06:39 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-08 22:08:35] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  8 06:39 run_atlas
[2025-10-08 22:08:35] -rw-r--r--. 1 boincer umatlas       105 Oct  8 06:39 job.xml
[2025-10-08 22:08:35] -rw-r--r--. 2 boincer umatlas 220074076 Oct  8 06:39 EVNT.46676267._000857.pool.root.1
[2025-10-08 22:08:35] -rw-r--r--. 2 boincer umatlas     15120 Oct  8 06:39 start_atlas.sh
[2025-10-08 22:08:35] drwxrwx--x. 2 boincer umatlas      4096 Oct  8 06:39 shared
[2025-10-08 22:08:35] -rw-r--r--. 2 boincer umatlas    569682 Oct  8 06:39 input.tar.gz
[2025-10-08 22:08:35] -rw-r--r--. 1 boincer umatlas         0 Oct  8 06:39 boinc_lockfile
[2025-10-08 22:08:35] -rw-r--r--. 1 boincer umatlas      2547 Oct  8 06:40 pandaJob.out
[2025-10-08 22:08:35] -rw-------. 1 boincer umatlas    979793 Oct  8 06:41 agis_schedconf.cvmfs.json
[2025-10-08 22:08:35] drwx------. 5 boincer umatlas      4096 Oct  8 06:41 pilot3
[2025-10-08 22:08:35] -rw-r--r--. 1 boincer umatlas      6524 Oct  8 22:02 init_data.xml
[2025-10-08 22:08:35] -rw-------. 1 boincer umatlas 196471375 Oct  8 22:03 HITS.46676269._004652.pool.root.1
[2025-10-08 22:08:35] -rw-r--r--. 1 boincer umatlas       531 Oct  8 22:03 boinc_task_state.xml
[2025-10-08 22:08:35] -rw-------. 1 boincer umatlas      1045 Oct  8 22:06 memory_monitor_summary.json
[2025-10-08 22:08:35] -rw-------. 1 boincer umatlas   1560401 Oct  8 22:06 agis_ddmendpoints.agis.ALL.json
[2025-10-08 22:08:35] -rw-------. 1 boincer umatlas    910533 Oct  8 22:06 log.46676269._004652.job.log.tgz.1
[2025-10-08 22:08:35] -rw-------. 1 boincer umatlas        95 Oct  8 22:07 pilot_heartbeat.json
[2025-10-08 22:08:35] -rw-------. 1 boincer umatlas      7823 Oct  8 22:07 heartbeat.json
[2025-10-08 22:08:35] -rw-r--r--. 1 boincer umatlas        28 Oct  8 22:08 wrapper_checkpoint.txt
[2025-10-08 22:08:35] -rw-------. 1 boincer umatlas       823 Oct  8 22:08 pilotlog.txt
[2025-10-08 22:08:35] -rw-------. 1 boincer umatlas   5783269 Oct  8 22:08 log.46676269._004652.job.log.1
[2025-10-08 22:08:35] -rw-------. 1 boincer umatlas       357 Oct  8 22:08 output.list
[2025-10-08 22:08:35] -rw-r--r--. 1 boincer umatlas       620 Oct  8 22:08 runtime_log
[2025-10-08 22:08:35] -rw-------. 1 boincer umatlas   6717440 Oct  8 22:08 result.tar.gz
[2025-10-08 22:08:35] -rw-r--r--. 1 boincer umatlas      8704 Oct  8 22:08 runtime_log.err
[2025-10-08 22:08:35] -rw-------. 1 boincer umatlas       658 Oct  8 22:08 1XfLDmqAgQ8n9Rq4apOajLDm4fhM0noT9bVof3QYDm5QMMDmu72HNn.diag
[2025-10-08 22:08:35] -rw-r--r--. 1 boincer umatlas      8192 Oct  8 22:08 boinc_mmap_file
[2025-10-08 22:08:35] -rw-r--r--. 1 boincer umatlas     21156 Oct  8 22:08 stderr.txt
[2025-10-08 22:08:35] HITS file was successfully produced:
[2025-10-08 22:08:35] -rw-------. 1 boincer umatlas 196471375 Oct  8 22:03 shared/HITS.pool.root.1
[2025-10-08 22:08:35]  *** Contents of shared directory: ***
[2025-10-08 22:08:35] total 413928
[2025-10-08 22:08:35] -rw-r--r--. 2 boincer umatlas 220074076 Oct  8 06:39 ATLAS.root_0
[2025-10-08 22:08:35] -rw-r--r--. 2 boincer umatlas     15120 Oct  8 06:39 start_atlas.sh
[2025-10-08 22:08:35] -rw-r--r--. 2 boincer umatlas    569682 Oct  8 06:39 input.tar.gz
[2025-10-08 22:08:35] -rw-------. 1 boincer umatlas 196471375 Oct  8 22:03 HITS.pool.root.1
[2025-10-08 22:08:35] -rw-------. 1 boincer umatlas   6717440 Oct  8 22:08 result.tar.gz
22:08:38 (3326931): run_atlas exited; CPU time 80367.631470
22:08:38 (3326931): called boinc_finish(0)

</stderr_txt>
]]>

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