Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-09 22:19:14 (28012): vboxwrapper version 26210
2025-10-09 22:19:14 (28012): BOINC client version: 7.24.1
2025-10-09 22:19:14 (28012): Detected: VirtualBox VboxManage Interface (Version: 5.2.8)
2025-10-09 22:19:15 (28012): Successfully copied 'init_data.xml' to the shared directory.
2025-10-09 22:19:15 (28012): Create VM. (boinc_d89ec99c873bea53, slot#0)
2025-10-09 22:19:15 (28012): Setting Memory Size for VM. (6000MB)
2025-10-09 22:19:16 (28012): Setting CPU Count for VM. (4)
2025-10-09 22:19:16 (28012): Setting Chipset Options for VM.
2025-10-09 22:19:16 (28012): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-09 22:19:16 (28012): Setting Boot Options for VM.
2025-10-09 22:19:17 (28012): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-09 22:19:17 (28012): Enabling VM Network Access.
2025-10-09 22:19:17 (28012): Disabling USB Support for VM.
2025-10-09 22:19:18 (28012): Disabling COM Port Support for VM.
2025-10-09 22:19:18 (28012): Disabling LPT Port Support for VM.
2025-10-09 22:19:18 (28012): Disabling Audio Support for VM.
2025-10-09 22:19:18 (28012): Disabling Clipboard Support for VM.
2025-10-09 22:19:19 (28012): Disabling Drag and Drop Support for VM.
2025-10-09 22:19:19 (28012): Adding storage controller(s) to VM.
2025-10-09 22:19:19 (28012): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-09 22:19:20 (28012): Adding VirtualBox Guest Additions to VM.
2025-10-09 22:19:20 (28012): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-09 22:19:21 (28012): forwarding host port 52069 to guest port 80
2025-10-09 22:19:21 (28012): Enabling remote desktop for VM.
2025-10-09 22:19:21 (28012): Enabling shared directory for VM.
2025-10-09 22:19:22 (28012): Starting VM using VBoxManage interface. (boinc_d89ec99c873bea53, slot#0)
2025-10-09 22:19:27 (28012): Successfully started VM. (PID = '35116')
2025-10-09 22:19:27 (28012): Reporting VM Process ID to BOINC.
2025-10-09 22:19:27 (28012): Guest Log: BIOS: VirtualBox 5.2.8
2025-10-09 22:19:27 (28012): Guest Log: CPUID EDX: 0x178bfbff
2025-10-09 22:19:27 (28012): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-09 22:19:27 (28012): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-09 22:19:27 (28012): Detected: Web Application Enabled (http://localhost:52069)
2025-10-09 22:19:27 (28012): Detected: Remote Desktop Enabled (localhost:52070)
2025-10-09 22:19:27 (28012): Preference change detected
2025-10-09 22:19:27 (28012): Setting CPU throttle for VM. (100%)
2025-10-09 22:19:27 (28012): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 300 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-09 22:19:29 (28012): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-09 22:19:29 (28012): Guest Log: BIOS: Booting from Hard Disk...
2025-10-09 22:19:33 (28012): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-09 22:19:33 (28012): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-09 22:19:33 (28012): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-09 22:19:33 (28012): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-09 22:19:33 (28012): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-09 22:19:33 (28012): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-09 22:19:33 (28012): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-09 22:19:33 (28012): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-09 22:19:33 (28012): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-09 22:19:33 (28012): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-09 22:19:33 (28012): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-09 22:19:33 (28012): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-09 22:19:33 (28012): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-09 22:19:33 (28012): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-09 22:19:33 (28012): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-09 22:19:33 (28012): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-09 22:19:33 (28012): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-09 22:19:33 (28012): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-09 22:19:33 (28012): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-09 22:19:33 (28012): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-09 22:19:33 (28012): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-09 22:19:33 (28012): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-09 22:19:33 (28012): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-09 22:19:33 (28012): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-09 22:19:33 (28012): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-09 22:19:33 (28012): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-09 22:19:33 (28012): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-09 22:19:33 (28012): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-09 22:19:33 (28012): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-09 22:19:33 (28012): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-09 22:19:33 (28012): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-09 22:19:33 (28012): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-09 22:19:38 (28012): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-09 22:19:38 (28012): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0000000 (size 0x400000)
2025-10-09 22:19:48 (28012): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-09 22:19:48 (28012): Guest Log: 00:00:00.000235 main     Log opened 2025-10-09T22:19:46.406094000Z
2025-10-09 22:19:48 (28012): Guest Log: 00:00:00.000358 main     OS Product: Linux
2025-10-09 22:19:48 (28012): Guest Log: 00:00:00.000446 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-09 22:19:48 (28012): Guest Log: 00:00:00.000495 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-09 22:19:48 (28012): Guest Log: 00:00:00.000543 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-09 22:19:48 (28012): Guest Log: 00:00:00.000545 main     Process ID: 1352
2025-10-09 22:19:48 (28012): Guest Log: 00:00:00.000546 main     Package type: LINUX_64BITS_GENERIC
2025-10-09 22:19:48 (28012): Guest Log: 00:00:00.001755 main     5.2.32 r132073 started. Verbose level = 0
2025-10-09 22:19:48 (28012): Guest Log: 00:00:00.002778 main     Error: Service 'control' failed to initialize: VERR_INVALID_PARAMETER
2025-10-09 22:19:48 (28012): Guest Log: 00:00:00.002936 main     Session 0 is about to close ...
2025-10-09 22:19:48 (28012): Guest Log: 00:00:00.002986 main     Stopping all guest processes ...
2025-10-09 22:19:48 (28012): Guest Log: 00:00:00.003035 main     Closing all guest files ...
2025-10-09 22:19:48 (28012): Guest Log: 00:00:00.003207 main     Ended.
2025-10-09 22:19:48 (28012): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-09 22:19:48 (28012): Guest Log: [INFO] Mounting shared directory
2025-10-09 22:19:48 (28012): Guest Log: [INFO] Checking for init_data.xml
2025-10-09 22:19:54 (28012): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-09 22:19:54 (28012): Guest Log: [INFO] Detected branch: prod
2025-10-09 22:19:55 (28012): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-09 22:19:55 (28012): Guest Log: Copying input files
2025-10-09 22:19:57 (28012): Guest Log: Copied input files into RunAtlas.
2025-10-09 22:19:57 (28012): Guest Log: Detected user-configured HTTP proxy at http://192.168.0.39:3128 - will set in /etc/cvmfs/default.local
2025-10-09 22:20:07 (28012): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-09 22:20:07 (28012): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-09 22:20:07 (28012): Guest Log: 2.6.3.0 1626 0 31656 151522 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.0.39:3128 1
2025-10-09 22:20:08 (28012): Guest Log: copied the webapp to /var/www
2025-10-09 22:20:08 (28012): Guest Log: ATHENA_PROC_NUMBER=4
2025-10-09 22:20:08 (28012): Guest Log: ATHENA_CORE_NUMBER=4
2025-10-09 22:20:08 (28012): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-09 22:20:08 (28012): Guest Log:  *** Starting ATLAS job. (PandaID=6835975812 taskID=46676269) ***
2025-10-09 23:59:31 (28012): Status Report: Elapsed Time: '6000.000000'
2025-10-09 23:59:31 (28012): Status Report: CPU Time: '20912.187500'
2025-10-10 01:39:35 (28012): Status Report: Elapsed Time: '12000.000000'
2025-10-10 01:39:35 (28012): Status Report: CPU Time: '44757.875000'
2025-10-10 03:19:40 (28012): Status Report: Elapsed Time: '18000.000000'
2025-10-10 03:19:40 (28012): Status Report: CPU Time: '68600.203125'
2025-10-10 04:27:53 (28012): Guest Log:  *** Job finished ***
2025-10-10 04:27:53 (28012): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-10 04:27:53 (28012): Guest Log: 2025-10-10 04:27:21,075 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-10 04:27:53 (28012): Guest Log: 2025-10-10 04:27:21,075 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-10 04:27:53 (28012): Guest Log: 2025-10-10 04:27:43,707 | INFO     | [monitor] cgroup control has ended
2025-10-10 04:27:53 (28012): Guest Log: 2025-10-10 04:27:44,644 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140388665972544)>', '<ExcThread(monitor, started 140388245432064)>']
2025-10-10 04:27:53 (28012): Guest Log: 2025-10-10 04:27:45,186 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-10 04:27:53 (28012): Guest Log: 2025-10-10 04:27:45,187 | INFO     | [monitor] control thread has ended
2025-10-10 04:27:53 (28012): Guest Log: 2025-10-10 04:27:49,650 | INFO     | all workflow threads have been joined
2025-10-10 04:27:53 (28012): Guest Log: 2025-10-10 04:27:49,650 | INFO     | end of generic workflow (traces error code: 0)
2025-10-10 04:27:53 (28012): Guest Log: 2025-10-10 04:27:49,650 | INFO     | traces error code: 0
2025-10-10 04:27:53 (28012): Guest Log: 2025-10-10 04:27:49,651 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-10 04:27:53 (28012): Guest Log: 2025-10-10 04:27:49,770 [wrapper] ==== pilot stdout END ====
2025-10-10 04:27:53 (28012): Guest Log: 2025-10-10 04:27:49,777 [wrapper] ==== wrapper stdout RESUME ====
2025-10-10 04:27:53 (28012): Guest Log: 2025-10-10 04:27:49,784 [wrapper] pilotpid: 6016
2025-10-10 04:27:53 (28012): Guest Log: 2025-10-10 04:27:49,791 [wrapper] Pilot exit status: 0
2025-10-10 04:27:53 (28012): Guest Log: 2025-10-10 04:27:50,368 [wrapper] pandaids: 6835975812
2025-10-10 04:27:53 (28012): Guest Log: 2025-10-10 04:27:50,420 [wrapper] cleanup supervisor_pilot 26141 6017
2025-10-10 04:27:53 (28012): Guest Log: 2025-10-10 04:27:50,427 [wrapper] Test setup, not cleaning
2025-10-10 04:27:53 (28012): Guest Log: 2025-10-10 04:27:50,434 [wrapper] apfmon messages muted
2025-10-10 04:27:53 (28012): Guest Log: 2025-10-10 04:27:50,441 [wrapper] ==== wrapper stdout END ====
2025-10-10 04:27:53 (28012): Guest Log: 2025-10-10 04:27:50,449 [wrapper] ==== wrapper stderr END ====
2025-10-10 04:27:53 (28012): Guest Log:  *** Error codes and diagnostics ***
2025-10-10 04:27:53 (28012): Guest Log:     "exeErrorCode": 0,
2025-10-10 04:27:53 (28012): Guest Log:     "exeErrorDiag": "",
2025-10-10 04:27:53 (28012): Guest Log:     "pilotErrorCode": 0,
2025-10-10 04:27:53 (28012): Guest Log:     "pilotErrorDiag": "",
2025-10-10 04:27:53 (28012): Guest Log:  *** Listing of results directory ***
2025-10-10 04:27:53 (28012): Guest Log: total 194936
2025-10-10 04:27:53 (28012): Guest Log: -rw-r--r--. 1 atlas atlas    557409 Oct  8 09:48 pilot3.tar.gz
2025-10-10 04:27:53 (28012): Guest Log: -rwx------. 1 atlas atlas     36292 Oct  8 09:53 runpilot2-wrapper.sh
2025-10-10 04:27:53 (28012): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct  8 09:53 queuedata.json
2025-10-10 04:27:53 (28012): Guest Log: -rwxr-xr-x. 1 atlas atlas      9309 Oct  9 22:19 init_data.xml
2025-10-10 04:27:53 (28012): Guest Log: -rwxr-xr-x. 1 atlas atlas    569680 Oct  9 22:19 input.tar.gz
2025-10-10 04:27:53 (28012): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct  9 22:19 start_atlas.sh
2025-10-10 04:27:53 (28012): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct  9 22:19 EVNT.46676267._000126.pool.root.1 -> /data/./ATLAS.root_0
2025-10-10 04:27:53 (28012): Guest Log: -rw-r--r--. 1 atlas atlas      2548 Oct  9 22:20 pandaJob.out
2025-10-10 04:27:53 (28012): Guest Log: -rw-------. 1 atlas atlas    975454 Oct  9 22:21 agis_schedconf.cvmfs.json
2025-10-10 04:27:53 (28012): Guest Log: drwx------. 5 atlas atlas      4096 Oct  9 22:21 pilot3
2025-10-10 04:27:53 (28012): Guest Log: -rw-------. 1 atlas atlas 189020242 Oct 10 04:25 HITS.46676269._003134.pool.root.1
2025-10-10 04:27:53 (28012): Guest Log: -rw-------. 1 atlas atlas      1030 Oct 10 04:26 memory_monitor_summary.json
2025-10-10 04:27:53 (28012): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 10 04:26 agis_ddmendpoints.agis.ALL.json
2025-10-10 04:27:53 (28012): Guest Log: -rw-------. 1 atlas atlas    486833 Oct 10 04:26 log.46676269._003134.job.log.tgz.1
2025-10-10 04:27:53 (28012): Guest Log: -rw-------. 1 atlas atlas      7814 Oct 10 04:26 heartbeat.json
2025-10-10 04:27:53 (28012): Guest Log: -rw-------. 1 atlas atlas        95 Oct 10 04:27 pilot_heartbeat.json
2025-10-10 04:27:53 (28012): Guest Log: -rw-------. 1 atlas atlas      4877 Oct 10 04:27 pilotlog.txt
2025-10-10 04:27:53 (28012): Guest Log: -rw-------. 1 atlas atlas   2894356 Oct 10 04:27 log.46676269._003134.job.log.1
2025-10-10 04:27:53 (28012): Guest Log: -rw-------. 1 atlas atlas       357 Oct 10 04:27 output.list
2025-10-10 04:27:53 (28012): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 10 04:27 runtime_log
2025-10-10 04:27:53 (28012): Guest Log: -rw-------. 1 atlas atlas   3399680 Oct 10 04:27 result.tar.gz
2025-10-10 04:27:53 (28012): Guest Log: -rw-r--r--. 1 atlas atlas      8649 Oct 10 04:27 runtime_log.err
2025-10-10 04:27:53 (28012): Guest Log: -rw-------. 1 atlas atlas       661 Oct 10 04:27 NCqMDm91fQ8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmWlXNDmT1zRbm.diag
2025-10-10 04:27:53 (28012): Guest Log: Looking for outputfile HITS.46676269._003134.pool.root.1
2025-10-10 04:27:53 (28012): Guest Log: HITS file was successfully produced
2025-10-10 04:27:53 (28012): Guest Log: -rw-------. 1 atlas atlas 189020242 Oct 10 04:25 /home/atlas/RunAtlas/HITS.46676269._003134.pool.root.1
2025-10-10 04:27:54 (28012): Guest Log: Successfully finished the ATLAS job!
2025-10-10 04:27:54 (28012): Guest Log: Copying the results back to the shared directory!
2025-10-10 04:27:54 (28012): Guest Log:  *** Contents of shared directory: ***
2025-10-10 04:27:54 (28012): Guest Log: total 402332
2025-10-10 04:27:54 (28012): Guest Log: -rwxrwxrwx. 1 root root 218971004 Oct  9 20:19 ATLAS.root_0
2025-10-10 04:27:54 (28012): Guest Log: -rwxrwxrwx. 1 root root 189020242 Oct 10 02:27 HITS.pool.root.1
2025-10-10 04:27:54 (28012): Guest Log: -rwxrwxrwx. 1 root root      9309 Oct  9 20:19 init_data.xml
2025-10-10 04:27:54 (28012): Guest Log: -rwxrwxrwx. 1 root root    569680 Oct  8 10:05 input.tar.gz
2025-10-10 04:27:54 (28012): Guest Log: -rwxrwxrwx. 1 root root   3399680 Oct 10 02:27 result.tar.gz
2025-10-10 04:27:54 (28012): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct  8 10:05 start_atlas.sh
2025-10-10 04:27:54 (28012): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-10 04:27:54 (28012): VM Completion File Detected.
2025-10-10 04:27:54 (28012): Powering off VM.
2025-10-10 04:27:55 (28012): Successfully stopped VM.
2025-10-10 04:27:55 (28012): Deregistering VM. (boinc_d89ec99c873bea53, slot#0)
2025-10-10 04:27:55 (28012): Removing network bandwidth throttle group from VM.
2025-10-10 04:27:55 (28012): Removing VM from VirtualBox.
2025-10-10 04:28:00 (28012): called boinc_finish(0)

</stderr_txt>
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