Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
05:56:13 (515631): wrapper (7.7.26015): starting
05:56:13 (515631): wrapper: running run_atlas (--nthreads 11)
[2025-10-08 05:56:13] Arguments: --nthreads 11
[2025-10-08 05:56:13] Threads: 11
[2025-10-08 05:56:13] Checking for CVMFS
[2025-10-08 05:56:14] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 05:56:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 05:56:14] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 05:56:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 05:56:15] 2.13.2.0 7443 31275 124828 151467 1 739 20958317 40960000 27830 16776704 0 297109875 99.797 151949031 33903 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-08 05:56:15] CVMFS is ok
[2025-10-08 05:56:15] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-08 05:56:15] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-08 05:56:15] Further information can be found at the LHC@home message board.
[2025-10-08 05:56:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 05:56:15] Checking for apptainer binary...
[2025-10-08 05:56:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 05:56:15] Running /usr/bin/apptainer --version
[2025-10-08 05:56:15] apptainer version 1.4.2-1.el9
[2025-10-08 05:56:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 05:56:15] c8-16-1.aglt2.org
[2025-10-08 05:56:15] apptainer works
[2025-10-08 05:56:15] Set ATHENA_PROC_NUMBER=11
[2025-10-08 05:56:15] Set ATHENA_CORE_NUMBER=11
[2025-10-08 05:56:15] Starting ATLAS job with PandaID=6826358337
[2025-10-08 05:56:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-08 07:34:58]  *** The last 200 lines of the pilot log: ***
[2025-10-08 07:34:58] 2025-10-08 11:33:36,224 | INFO     | job 6826358337 has finished - writing final server update
[2025-10-08 07:34:58] 2025-10-08 11:33:36,224 | INFO     | total number of processed events: 400 (read)
[2025-10-08 07:34:58] 2025-10-08 11:33:36,259 | INFO     | executing command: lscpu
[2025-10-08 07:34:58] 2025-10-08 11:33:36,386 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-08 07:34:58] 2025-10-08 11:33:36,444 | INFO     | time since job start (5816s) is within the limit (172800.0s)
[2025-10-08 07:34:58] 2025-10-08 11:33:36,623 | INFO     | monitor loop #353: job 0:6826358337 is in state 'finished'
[2025-10-08 07:34:58] 2025-10-08 11:33:36,624 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 07:34:58] 2025-10-08 11:33:38,449 | INFO     | time since job start (5818s) is within the limit (172800.0s)
[2025-10-08 07:34:58] 2025-10-08 11:33:39,128 | INFO     | monitor loop #354: job 0:6826358337 is in state 'finished'
[2025-10-08 07:34:58] 2025-10-08 11:33:39,129 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 07:34:58] 2025-10-08 11:33:41,664 | INFO     | monitor loop #355: job 0:6826358337 is in state 'finished'
[2025-10-08 07:34:58] 2025-10-08 11:33:41,665 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 07:34:58] 2025-10-08 11:33:41,927 | INFO     | PID=533976 has CPU usage=9.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-08 07:34:58] 2025-10-08 11:33:41,927 | INFO     | .. there are 28 such processes running
[2025-10-08 07:34:58] 2025-10-08 11:33:42,929 | INFO     | time since job start (5822s) is within the limit (172800.0s)
[2025-10-08 07:34:58] 2025-10-08 11:33:42,930 | INFO     | 5825s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-08 07:34:58] 2025-10-08 11:33:44,185 | INFO     | monitor loop #356: job 0:6826358337 is in state 'finished'
[2025-10-08 07:34:58] 2025-10-08 11:33:44,186 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 07:34:58] 2025-10-08 11:33:44,936 | INFO     | time since job start (5824s) is within the limit (172800.0s)
[2025-10-08 07:34:58] 2025-10-08 11:33:46,692 | INFO     | monitor loop #357: job 0:6826358337 is in state 'finished'
[2025-10-08 07:34:58] 2025-10-08 11:33:46,693 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 07:34:58] 2025-10-08 11:33:46,961 | INFO     | time since job start (5826s) is within the limit (172800.0s)
[2025-10-08 07:34:58] 2025-10-08 11:33:48,989 | INFO     | time since job start (5828s) is within the limit (172800.0s)
[2025-10-08 07:34:58] 2025-10-08 11:33:49,201 | INFO     | monitor loop #358: job 0:6826358337 is in state 'finished'
[2025-10-08 07:34:58] 2025-10-08 11:33:49,202 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 07:34:58] 2025-10-08 11:33:51,023 | INFO     | time since job start (5831s) is within the limit (172800.0s)
[2025-10-08 07:34:58] 2025-10-08 11:33:51,706 | INFO     | monitor loop #359: job 0:6826358337 is in state 'finished'
[2025-10-08 07:34:58] 2025-10-08 11:33:51,708 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 07:34:58] 2025-10-08 11:33:53,034 | INFO     | time since job start (5833s) is within the limit (172800.0s)
[2025-10-08 07:34:58] 2025-10-08 11:33:54,212 | INFO     | monitor loop #360: job 0:6826358337 is in state 'finished'
[2025-10-08 07:34:58] 2025-10-08 11:33:54,213 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 07:34:58] 2025-10-08 11:33:55,045 | INFO     | time since job start (5835s) is within the limit (172800.0s)
[2025-10-08 07:34:58] 2025-10-08 11:33:56,719 | INFO     | monitor loop #361: job 0:6826358337 is in state 'finished'
[2025-10-08 07:34:58] 2025-10-08 11:33:56,720 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 07:34:58] 2025-10-08 11:33:57,063 | INFO     | time since job start (5837s) is within the limit (172800.0s)
[2025-10-08 07:34:58] 2025-10-08 11:33:58,268 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-08 07:34:58] 2025-10-08 11:33:58,274 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3798.8109687499987
[2025-10-08 07:34:58] 2025-10-08 11:33:58,288 | INFO     | using path: /tmp/boinchome/slots/4/PanDA_Pilot-6826358337/memory_monitor_summary.json (trf name=prmon)
[2025-10-08 07:34:58] 2025-10-08 11:33:58,289 | INFO     | extracted standard info from prmon json
[2025-10-08 07:34:58] 2025-10-08 11:33:58,289 | INFO     | extracted standard memory fields from prmon json
[2025-10-08 07:34:58] 2025-10-08 11:33:58,289 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-08 07:34:58] 2025-10-08 11:33:58,289 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-08 07:34:58] 2025-10-08 11:33:58,289 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-08 07:34:58] 2025-10-08 11:33:58,315 | INFO     | fitting pss+swap vs Time
[2025-10-08 07:34:58] 2025-10-08 11:33:58,315 | INFO     | sum of square deviations: 211317313.77272764
[2025-10-08 07:34:58] 2025-10-08 11:33:58,315 | INFO     | sum of deviations: 122711210.84090914
[2025-10-08 07:34:58] 2025-10-08 11:33:58,315 | INFO     | mean x: 1759920411.659091
[2025-10-08 07:34:58] 2025-10-08 11:33:58,315 | INFO     | mean y: 2623118.7613636362
[2025-10-08 07:34:58] 2025-10-08 11:33:58,315 | INFO     | -- intersect: -1019356390.8333212
[2025-10-08 07:34:58] 2025-10-08 11:33:58,315 | INFO     | intersect: -1019356390.8333212
[2025-10-08 07:34:58] 2025-10-08 11:33:58,315 | INFO     | chi2: 0.001872636692788545
[2025-10-08 07:34:58] 2025-10-08 11:33:58,316 | INFO     | -- intersect: -1019356390.8333212
[2025-10-08 07:34:58] 2025-10-08 11:33:58,316 | INFO     | current memory leak: 0.58 B/s (using 88 data points, chi2=0.00)
[2025-10-08 07:34:58] 2025-10-08 11:33:58,316 | INFO     | could have reported an average CPU frequency of 3789 MHz (7 samples)
[2025-10-08 07:34:58] 2025-10-08 11:33:58,316 | INFO     | ..............................
[2025-10-08 07:34:58] 2025-10-08 11:33:58,316 | INFO     | . Timing measurements:
[2025-10-08 07:34:58] 2025-10-08 11:33:58,316 | INFO     | . get job = 0 s
[2025-10-08 07:34:58] 2025-10-08 11:33:58,316 | INFO     | . initial setup = 3 s
[2025-10-08 07:34:58] 2025-10-08 11:33:58,316 | INFO     | . payload setup = 14 s
[2025-10-08 07:34:58] 2025-10-08 11:33:58,316 | INFO     | . stage-in = 0 s
[2025-10-08 07:34:58] 2025-10-08 11:33:58,316 | INFO     | . payload execution = 5768 s
[2025-10-08 07:34:58] 2025-10-08 11:33:58,316 | INFO     | . stage-out = 2 s
[2025-10-08 07:34:58] 2025-10-08 11:33:58,316 | INFO     | . log creation = 0 s
[2025-10-08 07:34:58] 2025-10-08 11:33:58,316 | INFO     | ..............................
[2025-10-08 07:34:58] 2025-10-08 11:33:58,434 | INFO     | 
[2025-10-08 07:34:58] 2025-10-08 11:33:58,435 | INFO     | job summary report
[2025-10-08 07:34:58] 2025-10-08 11:33:58,435 | INFO     | --------------------------------------------------
[2025-10-08 07:34:58] 2025-10-08 11:33:58,435 | INFO     | PanDA job id: 6826358337
[2025-10-08 07:34:58] 2025-10-08 11:33:58,435 | INFO     | task id: 46373048
[2025-10-08 07:34:58] 2025-10-08 11:33:58,435 | INFO     | errors: (none)
[2025-10-08 07:34:58] 2025-10-08 11:33:58,435 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-08 07:34:58] 2025-10-08 11:33:58,435 | INFO     | pilot state: finished 
[2025-10-08 07:34:58] 2025-10-08 11:33:58,435 | INFO     | transexitcode: 0
[2025-10-08 07:34:58] 2025-10-08 11:33:58,435 | INFO     | exeerrorcode: 0
[2025-10-08 07:34:58] 2025-10-08 11:33:58,435 | INFO     | exeerrordiag: 
[2025-10-08 07:34:58] 2025-10-08 11:33:58,435 | INFO     | exitcode: 0
[2025-10-08 07:34:58] 2025-10-08 11:33:58,435 | INFO     | exitmsg: OK
[2025-10-08 07:34:58] 2025-10-08 11:33:58,435 | INFO     | cpuconsumptiontime: 28784 s
[2025-10-08 07:34:58] 2025-10-08 11:33:58,435 | INFO     | nevents: 400
[2025-10-08 07:34:58] 2025-10-08 11:33:58,435 | INFO     | neventsw: 0
[2025-10-08 07:34:58] 2025-10-08 11:33:58,435 | INFO     | pid: 557656
[2025-10-08 07:34:58] 2025-10-08 11:33:58,435 | INFO     | pgrp: 557656
[2025-10-08 07:34:58] 2025-10-08 11:33:58,435 | INFO     | corecount: 11
[2025-10-08 07:34:58] 2025-10-08 11:33:58,435 | INFO     | event service: False
[2025-10-08 07:34:58] 2025-10-08 11:33:58,435 | INFO     | sizes: {0: 2348841, 10: 2349103, 11: 2349131, 5788: 2375776, 5790: 2384774, 5792: 2384830, 5815: 2385152}
[2025-10-08 07:34:58] 2025-10-08 11:33:58,435 | INFO     | --------------------------------------------------
[2025-10-08 07:34:58] 2025-10-08 11:33:58,435 | INFO     | 
[2025-10-08 07:34:58] 2025-10-08 11:33:58,435 | INFO     | executing command: ls -lF /tmp/boinchome/slots/4
[2025-10-08 07:34:58] 2025-10-08 11:33:58,515 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-08 07:34:58] 2025-10-08 11:33:58,515 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-08 07:34:58] 2025-10-08 11:33:58,515 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-08 07:34:58] 2025-10-08 11:33:58,515 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-08 07:34:58] 2025-10-08 11:33:58,515 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-08 07:34:58] 2025-10-08 11:33:58,516 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-08 07:34:58] 2025-10-08 11:33:58,516 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-08 07:34:58] 2025-10-08 11:33:58,516 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-08 07:34:58] 2025-10-08 11:33:58,516 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-08 07:34:58] 2025-10-08 11:33:58,516 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-08 07:34:58] 2025-10-08 11:33:58,516 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-08 07:34:58] 2025-10-08 11:33:58,516 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-08 07:34:58] 2025-10-08 11:33:58,516 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-08 07:34:58] 2025-10-08 11:33:58,516 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-08 07:34:58] 2025-10-08 11:33:58,516 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-08 07:34:58] 2025-10-08 11:33:58,516 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-08 07:34:58] 2025-10-08 11:33:58,516 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-08 07:34:58] 2025-10-08 11:33:58,516 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-08 07:34:58] 2025-10-08 11:33:58,516 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-08 07:34:58] 2025-10-08 11:33:58,516 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-08 07:34:58] 2025-10-08 11:33:58,516 | INFO     | job 6826358337 has completed (purged errors)
[2025-10-08 07:34:58] 2025-10-08 11:33:58,516 | INFO     | overall cleanup function is called
[2025-10-08 07:34:58] 2025-10-08 11:33:59,523 | INFO     | --- collectZombieJob: --- 10, [557656]
[2025-10-08 07:34:58] 2025-10-08 11:33:59,524 | INFO     | zombie collector waiting for pid 557656
[2025-10-08 07:34:58] 2025-10-08 11:33:59,524 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-08 07:34:58] 2025-10-08 11:33:59,524 | INFO     | collected zombie processes
[2025-10-08 07:34:58] 2025-10-08 11:33:59,524 | INFO     | will attempt to kill all subprocesses of pid=557656
[2025-10-08 07:34:58] 2025-10-08 11:34:01,437 | INFO     | process IDs to be killed: [557656] (in reverse order)
[2025-10-08 07:34:58] 2025-10-08 11:34:01,834 | WARNING  | found no corresponding commands to process id(s)
[2025-10-08 07:34:58] 2025-10-08 11:34:01,834 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-08 07:34:58] 2025-10-08 11:34:01,859 | INFO     | did not find any defunct processes belonging to 557656
[2025-10-08 07:34:58] 2025-10-08 11:34:01,884 | INFO     | did not find any defunct processes belonging to 557656
[2025-10-08 07:34:58] 2025-10-08 11:34:01,884 | INFO     | ready for new job
[2025-10-08 07:34:58] 2025-10-08 11:34:01,884 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-08 07:34:58] 2025-10-08 11:34:01,893 | INFO     | ***************************************
[2025-10-08 07:34:58] 2025-10-08 11:34:01,894 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-08 07:34:58] 2025-10-08 11:34:01,894 | INFO     | ***************************************
[2025-10-08 07:34:58] 2025-10-08 11:34:01,894 | INFO     | 
[2025-10-08 07:34:58] 2025-10-08 11:34:01,974 | INFO     | architecture information:
[2025-10-08 07:34:58] 2025-10-08 11:34:01,978 | INFO     | executing command: cat /etc/os-release
[2025-10-08 07:34:58] 2025-10-08 11:34:02,035 | INFO     | cat /etc/os-release:
[2025-10-08 07:34:58] NAME="CentOS Linux"
[2025-10-08 07:34:58] VERSION="7 (Core)"
[2025-10-08 07:34:58] ID="centos"
[2025-10-08 07:34:58] ID_LIKE="rhel fedora"
[2025-10-08 07:34:58] VERSION_ID="7"
[2025-10-08 07:34:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-08 07:34:58] ANSI_COLOR="0;31"
[2025-10-08 07:34:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-08 07:34:58] HOME_URL="https://www.centos.org/"
[2025-10-08 07:34:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-08 07:34:58] 
[2025-10-08 07:34:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-08 07:34:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-08 07:34:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-08 07:34:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-08 07:34:58] 
[2025-10-08 07:34:58] 2025-10-08 11:34:02,035 | INFO     | ***************************************
[2025-10-08 07:34:58] 2025-10-08 11:34:02,539 | INFO     | executing command: df -mP /tmp/boinchome/slots/4
[2025-10-08 07:34:58] 2025-10-08 11:34:02,617 | INFO     | sufficient remaining disk space (170206953472 B)
[2025-10-08 07:34:58] 2025-10-08 11:34:02,617 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-08 07:34:58] 2025-10-08 11:34:02,618 | INFO     | current server update state: UPDATING_FINAL
[2025-10-08 07:34:58] 2025-10-08 11:34:02,618 | INFO     | update_server=False
[2025-10-08 07:34:58] 2025-10-08 11:34:02,618 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-08 07:34:58] 2025-10-08 11:34:02,747 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-08 07:34:58] 2025-10-08 11:34:02,748 | INFO     | aborting loop
[2025-10-08 07:34:58] 2025-10-08 11:34:02,918 | INFO     | all data control threads have been joined
[2025-10-08 07:34:58] 2025-10-08 11:34:03,287 | INFO     | all job control threads have been joined
[2025-10-08 07:34:58] 2025-10-08 11:34:03,483 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-08 07:34:58] 2025-10-08 11:34:03,623 | INFO     | [job] retrieve thread has finished
[2025-10-08 07:34:58] 2025-10-08 11:34:03,638 | INFO     | all payload control threads have been joined
[2025-10-08 07:34:58] 2025-10-08 11:34:03,659 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-08 07:34:58] 2025-10-08 11:34:03,748 | INFO     | [job] create_data_payload thread has finished
[2025-10-08 07:34:58] 2025-10-08 11:34:03,753 | INFO     | [job] job monitor thread has finished
[2025-10-08 07:34:58] 2025-10-08 11:34:03,894 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-08 07:34:58] 2025-10-08 11:34:03,924 | INFO     | [data] control thread has finished
[2025-10-08 07:34:58] 2025-10-08 11:34:03,956 | INFO     | [payload] failed_post thread has finished
[2025-10-08 07:34:58] 2025-10-08 11:34:03,974 | INFO     | [job] validate thread has finished
[2025-10-08 07:34:58] 2025-10-08 11:34:04,175 | INFO     | [payload] validate_post thread has finished
[2025-10-08 07:34:58] 2025-10-08 11:34:04,235 | INFO     | [payload] validate_pre thread has finished
[2025-10-08 07:34:58] 2025-10-08 11:34:04,274 | INFO     | [data] copytool_in thread has finished
[2025-10-08 07:34:58] 2025-10-08 11:34:04,293 | INFO     | [job] control thread has finished
[2025-10-08 07:34:58] 2025-10-08 11:34:04,489 | INFO     | [job] queue monitor thread has finished
[2025-10-08 07:34:58] 2025-10-08 11:34:04,655 | INFO     | [payload] control thread has finished
[2025-10-08 07:34:58] 2025-10-08 11:34:04,796 | INFO     | [payload] execute_payloads thread has finished
[2025-10-08 07:34:58] 2025-10-08 11:34:05,666 | INFO     | [data] copytool_out thread has finished
[2025-10-08 07:34:58] 2025-10-08 11:34:07,909 | INFO     | [data] queue_monitor thread has finished
[2025-10-08 07:34:58] 2025-10-08 11:34:13,612 | INFO     | job.realtimelogging is not enabled
[2025-10-08 07:34:58] 2025-10-08 11:34:14,617 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-08 07:34:58] 2025-10-08 11:34:32,022 | INFO     | PID=533976 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-08 07:34:58] 2025-10-08 11:34:32,022 | INFO     | .. there are 29 such processes running
[2025-10-08 07:34:58] 2025-10-08 11:34:32,022 | INFO     | found 0 job(s) in 20 queues
[2025-10-08 07:34:58] 2025-10-08 11:34:32,022 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-08 07:34:58] 2025-10-08 11:34:32,022 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-08 07:34:58] 2025-10-08 11:34:50,312 | INFO     | [monitor] cgroup control has ended
[2025-10-08 07:34:58] 2025-10-08 11:34:52,202 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139921439655744)>', '<ExcThread(monitor, started 139920949626624)>']
[2025-10-08 07:34:58] 2025-10-08 11:34:52,207 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-08 07:34:58] 2025-10-08 11:34:52,207 | INFO     | [monitor] control thread has ended
[2025-10-08 07:34:58] 2025-10-08 11:34:57,228 | INFO     | all workflow threads have been joined
[2025-10-08 07:34:58] 2025-10-08 11:34:57,229 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-08 07:34:58] 2025-10-08 11:34:57,229 | INFO     | traces error code: 0
[2025-10-08 07:34:58] 2025-10-08 11:34:57,229 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-08 07:34:58] 2025-10-08 11:34:57,596 [wrapper] ==== pilot stdout END ====
[2025-10-08 07:34:58] 2025-10-08 11:34:57,606 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-08 07:34:58] 2025-10-08 11:34:57,620 [wrapper] pilotpid: 533976
[2025-10-08 07:34:58] 2025-10-08 11:34:57,628 [wrapper] Pilot exit status: 0
[2025-10-08 07:34:58] 2025-10-08 11:34:57,706 [wrapper] pandaids: 6826358337
[2025-10-08 07:34:58] 2025-10-08 11:34:57,830 [wrapper] cleanup supervisor_pilot  940800 533977
[2025-10-08 07:34:58] 2025-10-08 11:34:57,846 [wrapper] Test setup, not cleaning
[2025-10-08 07:34:58] 2025-10-08 11:34:57,862 [wrapper] apfmon messages muted
[2025-10-08 07:34:58] 2025-10-08 11:34:57,879 [wrapper] ==== wrapper stdout END ====
[2025-10-08 07:34:58] 2025-10-08 11:34:57,890 [wrapper] ==== wrapper stderr END ====
[2025-10-08 07:34:58]  *** Error codes and diagnostics ***
[2025-10-08 07:34:58]     "exeErrorCode": 0,
[2025-10-08 07:34:58]     "exeErrorDiag": "",
[2025-10-08 07:34:58]     "pilotErrorCode": 0,
[2025-10-08 07:34:58]     "pilotErrorDiag": "",
[2025-10-08 07:34:58]  *** Listing of results directory ***
[2025-10-08 07:34:58] total 409204
[2025-10-08 07:34:58] -rw-r--r--. 1 boincer umatlas    552446 Oct  1 02:22 pilot3.tar.gz
[2025-10-08 07:34:58] -rwx------. 1 boincer umatlas     36292 Oct  1 02:51 runpilot2-wrapper.sh
[2025-10-08 07:34:58] -rw-r--r--. 1 boincer umatlas      5112 Oct  1 02:51 queuedata.json
[2025-10-08 07:34:58] -rw-r--r--. 1 boincer umatlas       100 Oct  8 05:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-08 07:34:58] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  8 05:56 run_atlas
[2025-10-08 07:34:58] -rw-r--r--. 1 boincer umatlas       105 Oct  8 05:56 job.xml
[2025-10-08 07:34:58] -rw-r--r--. 2 boincer umatlas 220710807 Oct  8 05:56 EVNT.46373045._001984.pool.root.1
[2025-10-08 07:34:58] -rw-r--r--. 2 boincer umatlas     15120 Oct  8 05:56 start_atlas.sh
[2025-10-08 07:34:58] drwxrwx--x. 2 boincer umatlas      4096 Oct  8 05:56 shared
[2025-10-08 07:34:58] -rw-r--r--. 2 boincer umatlas    565601 Oct  8 05:56 input.tar.gz
[2025-10-08 07:34:58] -rw-r--r--. 1 boincer umatlas         0 Oct  8 05:56 boinc_lockfile
[2025-10-08 07:34:58] -rw-r--r--. 1 boincer umatlas      2538 Oct  8 05:56 pandaJob.out
[2025-10-08 07:34:58] -rw-------. 1 boincer umatlas    979801 Oct  8 05:56 agis_schedconf.cvmfs.json
[2025-10-08 07:34:58] -rw-------. 1 boincer umatlas   1560401 Oct  8 05:56 agis_ddmendpoints.agis.ALL.json
[2025-10-08 07:34:58] drwx------. 4 boincer umatlas      4096 Oct  8 05:56 pilot3
[2025-10-08 07:34:58] -rw-------. 1 boincer umatlas 192146372 Oct  8 07:31 HITS.46373048._078522.pool.root.1
[2025-10-08 07:34:58] -rw-r--r--. 1 boincer umatlas       530 Oct  8 07:31 boinc_task_state.xml
[2025-10-08 07:34:58] -rw-r--r--. 1 boincer umatlas      7163 Oct  8 07:31 init_data.xml
[2025-10-08 07:34:58] -rw-------. 1 boincer umatlas      1049 Oct  8 07:33 memory_monitor_summary.json
[2025-10-08 07:34:58] -rw-------. 1 boincer umatlas    387501 Oct  8 07:33 log.46373048._078522.job.log.tgz.1
[2025-10-08 07:34:58] -rw-------. 1 boincer umatlas        95 Oct  8 07:33 pilot_heartbeat.json
[2025-10-08 07:34:58] -rw-------. 1 boincer umatlas      7799 Oct  8 07:33 heartbeat.json
[2025-10-08 07:34:58] -rw-r--r--. 1 boincer umatlas      8192 Oct  8 07:34 boinc_mmap_file
[2025-10-08 07:34:58] -rw-r--r--. 1 boincer umatlas        27 Oct  8 07:34 wrapper_checkpoint.txt
[2025-10-08 07:34:58] -rw-------. 1 boincer umatlas      4896 Oct  8 07:34 pilotlog.txt
[2025-10-08 07:34:58] -rw-------. 1 boincer umatlas    751395 Oct  8 07:34 log.46373048._078522.job.log.1
[2025-10-08 07:34:58] -rw-------. 1 boincer umatlas       357 Oct  8 07:34 output.list
[2025-10-08 07:34:58] -rw-r--r--. 1 boincer umatlas       620 Oct  8 07:34 runtime_log
[2025-10-08 07:34:58] -rw-------. 1 boincer umatlas   1157120 Oct  8 07:34 result.tar.gz
[2025-10-08 07:34:58] -rw-------. 1 boincer umatlas       656 Oct  8 07:34 TK0NDmar5N8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmgMBNDmFlyaLo.diag
[2025-10-08 07:34:58] -rw-r--r--. 1 boincer umatlas      8700 Oct  8 07:34 runtime_log.err
[2025-10-08 07:34:58] -rw-r--r--. 1 boincer umatlas     22328 Oct  8 07:34 stderr.txt
[2025-10-08 07:34:58] HITS file was successfully produced:
[2025-10-08 07:34:58] -rw-------. 1 boincer umatlas 192146372 Oct  8 07:31 shared/HITS.pool.root.1
[2025-10-08 07:34:58]  *** Contents of shared directory: ***
[2025-10-08 07:34:58] total 404892
[2025-10-08 07:34:58] -rw-r--r--. 2 boincer umatlas 220710807 Oct  8 05:56 ATLAS.root_0
[2025-10-08 07:34:58] -rw-r--r--. 2 boincer umatlas     15120 Oct  8 05:56 start_atlas.sh
[2025-10-08 07:34:58] -rw-r--r--. 2 boincer umatlas    565601 Oct  8 05:56 input.tar.gz
[2025-10-08 07:34:58] -rw-------. 1 boincer umatlas 192146372 Oct  8 07:31 HITS.pool.root.1
[2025-10-08 07:34:58] -rw-------. 1 boincer umatlas   1157120 Oct  8 07:34 result.tar.gz
07:35:00 (515631): run_atlas exited; CPU time 28929.196964
07:35:00 (515631): called boinc_finish(0)

</stderr_txt>
]]>

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