Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:58:09 (3939830): wrapper (7.7.26015): starting
18:58:09 (3939830): wrapper: running run_atlas (--nthreads 4)
[2025-10-10 18:58:09] Arguments: --nthreads 4
[2025-10-10 18:58:09] Threads: 4
[2025-10-10 18:58:09] Checking for CVMFS
[2025-10-10 18:58:09] No cvmfs_config command found, will try listing directly
[2025-10-10 18:58:09] CVMFS is ok
[2025-10-10 18:58:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-10 18:58:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-10 18:58:09] Further information can be found at the LHC@home message board.
[2025-10-10 18:58:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-10 18:58:09] Checking for apptainer binary...
[2025-10-10 18:58:09] which: no apptainer in ((null))
[2025-10-10 18:58:09] apptainer is not installed, using version from CVMFS
[2025-10-10 18:58:09] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-10 18:58:09] WARNING: Environment variable TMPDIR already has value [/scratch/boinc/var/slot32/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment skurut02.grid.cesnet.cz
[2025-10-10 18:58:09] apptainer works
[2025-10-10 18:58:09] Set ATHENA_PROC_NUMBER=4
[2025-10-10 18:58:09] Set ATHENA_CORE_NUMBER=4
[2025-10-10 18:58:09] Starting ATLAS job with PandaID=6832426258
[2025-10-10 18:58:09] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/scratch/boinc/var/slot32/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-10 21:13:50]  *** The last 200 lines of the pilot log: ***
[2025-10-10 21:13:50] 2025-10-10 19:00:45,638 | INFO     | current chi2=1.2266550994147205 (change=-0.1552465300469794 %)
[2025-10-10 21:13:50] 2025-10-10 19:00:45,638 | INFO     | right removable region: 114
[2025-10-10 21:13:50] 2025-10-10 19:00:45,639 | INFO     | sum of square deviations: 471562330.0
[2025-10-10 21:13:50] 2025-10-10 19:00:45,639 | INFO     | sum of deviations: -5244354098.000001
[2025-10-10 21:13:50] 2025-10-10 19:00:45,639 | INFO     | mean x: 1760119310.0
[2025-10-10 21:13:50] 2025-10-10 19:00:45,639 | INFO     | mean y: 2356203.513043478
[2025-10-10 21:13:50] 2025-10-10 19:00:45,640 | INFO     | -- intersect: 19577051485.825848
[2025-10-10 21:13:50] 2025-10-10 19:00:45,640 | INFO     | intersect: 19577051485.825848
[2025-10-10 21:13:50] 2025-10-10 19:00:45,640 | INFO     | chi2: 0.04319566866441295
[2025-10-10 21:13:50] 2025-10-10 19:00:45,640 | INFO     | current chi2=0.04319566866441295 (change=96.47311388003136 %)
[2025-10-10 21:13:50] 2025-10-10 19:00:45,640 | INFO     | sum of square deviations: 412686807.5
[2025-10-10 21:13:50] 2025-10-10 19:00:45,641 | INFO     | sum of deviations: -2773412824.000001
[2025-10-10 21:13:50] 2025-10-10 19:00:45,641 | INFO     | mean x: 1760119462.5
[2025-10-10 21:13:50] 2025-10-10 19:00:45,641 | INFO     | mean y: 2349787.7454545456
[2025-10-10 21:13:50] 2025-10-10 19:00:45,641 | INFO     | -- intersect: 11831024221.612568
[2025-10-10 21:13:50] 2025-10-10 19:00:45,641 | INFO     | intersect: 11831024221.612568
[2025-10-10 21:13:50] 2025-10-10 19:00:45,641 | INFO     | chi2: 0.032181346626823884
[2025-10-10 21:13:50] 2025-10-10 19:00:45,641 | INFO     | current chi2=0.032181346626823884 (change=25.498672385787813 %)
[2025-10-10 21:13:50] 2025-10-10 19:00:45,642 | INFO     | sum of square deviations: 358927660.0
[2025-10-10 21:13:50] 2025-10-10 19:00:45,642 | INFO     | sum of deviations: 94953454.00000006
[2025-10-10 21:13:50] 2025-10-10 19:00:45,642 | INFO     | mean x: 1760119615.0
[2025-10-10 21:13:50] 2025-10-10 19:00:45,642 | INFO     | mean y: 2341636.495238095
[2025-10-10 21:13:50] 2025-10-10 19:00:45,642 | INFO     | -- intersect: -463293797.94690084
[2025-10-10 21:13:50] 2025-10-10 19:00:45,642 | INFO     | intersect: -463293797.94690084
[2025-10-10 21:13:50] 2025-10-10 19:00:45,643 | INFO     | chi2: 0.008289579040336975
[2025-10-10 21:13:50] 2025-10-10 19:00:45,643 | INFO     | current chi2=0.008289579040336975 (change=74.24104361926413 %)
[2025-10-10 21:13:50] 2025-10-10 19:00:45,643 | INFO     | sum of square deviations: 310052325.0
[2025-10-10 21:13:50] 2025-10-10 19:00:45,643 | INFO     | sum of deviations: 588158553.5000001
[2025-10-10 21:13:50] 2025-10-10 19:00:45,644 | INFO     | mean x: 1760119767.5
[2025-10-10 21:13:50] 2025-10-10 19:00:45,644 | INFO     | mean y: 2340178.03
[2025-10-10 21:13:50] 2025-10-10 19:00:45,644 | INFO     | -- intersect: -3336546238.769346
[2025-10-10 21:13:50] 2025-10-10 19:00:45,644 | INFO     | intersect: -3336546238.769346
[2025-10-10 21:13:50] 2025-10-10 19:00:45,644 | INFO     | chi2: 0.0005670653965524597
[2025-10-10 21:13:50] 2025-10-10 19:00:45,644 | INFO     | current chi2=0.0005670653965524597 (change=93.15929803198537 %)
[2025-10-10 21:13:50] 2025-10-10 19:00:45,644 | INFO     | sum of square deviations: 265828240.0
[2025-10-10 21:13:50] 2025-10-10 19:00:45,645 | INFO     | sum of deviations: 407498361.00000036
[2025-10-10 21:13:50] 2025-10-10 19:00:45,645 | INFO     | mean x: 1760119920.0
[2025-10-10 21:13:50] 2025-10-10 19:00:45,645 | INFO     | mean y: 2340801.389473684
[2025-10-10 21:13:50] 2025-10-10 19:00:45,645 | INFO     | -- intersect: -2695814904.578604
[2025-10-10 21:13:50] 2025-10-10 19:00:45,645 | INFO     | intersect: -2695814904.578604
[2025-10-10 21:13:50] 2025-10-10 19:00:45,645 | INFO     | chi2: 0.0005217190996971164
[2025-10-10 21:13:50] 2025-10-10 19:00:45,645 | INFO     | current chi2=0.0005217190996971164 (change=7.996660902081383 %)
[2025-10-10 21:13:50] 2025-10-10 19:00:45,645 | INFO     | left removable region: 50
[2025-10-10 21:13:50] 2025-10-10 19:00:45,646 | INFO     | sum of square deviations: 81266640.0
[2025-10-10 21:13:50] 2025-10-10 19:00:45,646 | INFO     | sum of deviations: 46636391.0
[2025-10-10 21:13:50] 2025-10-10 19:00:45,646 | INFO     | mean x: 1760120499.5
[2025-10-10 21:13:50] 2025-10-10 19:00:45,646 | INFO     | mean y: 2342695.1875
[2025-10-10 21:13:50] 2025-10-10 19:00:45,646 | INFO     | -- intersect: -1007735583.2032062
[2025-10-10 21:13:50] 2025-10-10 19:00:45,646 | INFO     | intersect: -1007735583.2032062
[2025-10-10 21:13:50] 2025-10-10 19:00:45,646 | INFO     | chi2: 0.0003483923406323985
[2025-10-10 21:13:50] 2025-10-10 19:00:45,647 | INFO     | -- intersect: -1007735583.2032062
[2025-10-10 21:13:50] 2025-10-10 19:00:45,647 | INFO     | current memory leak: 0.57 B/s (using 64 data points, chi2=0.00)
[2025-10-10 21:13:50] 2025-10-10 19:00:45,647 | INFO     | could have reported an average CPU frequency of 2824 MHz (8 samples)
[2025-10-10 21:13:50] 2025-10-10 19:00:45,647 | INFO     | ..............................
[2025-10-10 21:13:50] 2025-10-10 19:00:45,647 | INFO     | . Timing measurements:
[2025-10-10 21:13:50] 2025-10-10 19:00:45,647 | INFO     | . get job = 0 s
[2025-10-10 21:13:50] 2025-10-10 19:00:45,648 | INFO     | . initial setup = 1 s
[2025-10-10 21:13:50] 2025-10-10 19:00:45,648 | INFO     | . payload setup = 6 s
[2025-10-10 21:13:50] 2025-10-10 19:00:45,648 | INFO     | . stage-in = 0 s
[2025-10-10 21:13:50] 2025-10-10 19:00:45,648 | INFO     | . payload execution = 7308 s
[2025-10-10 21:13:50] 2025-10-10 19:00:45,648 | INFO     | . stage-out = 0 s
[2025-10-10 21:13:50] 2025-10-10 19:00:45,648 | INFO     | . log creation = 0 s
[2025-10-10 21:13:50] 2025-10-10 19:00:45,648 | INFO     | ..............................
[2025-10-10 21:13:50] 2025-10-10 19:00:45,740 | INFO     | 
[2025-10-10 21:13:50] 2025-10-10 19:00:45,740 | INFO     | job summary report
[2025-10-10 21:13:50] 2025-10-10 19:00:45,740 | INFO     | --------------------------------------------------
[2025-10-10 21:13:50] 2025-10-10 19:00:45,740 | INFO     | PanDA job id: 6832426258
[2025-10-10 21:13:50] 2025-10-10 19:00:45,740 | INFO     | task id: 46376905
[2025-10-10 21:13:50] 2025-10-10 19:00:45,740 | INFO     | errors: (none)
[2025-10-10 21:13:50] 2025-10-10 19:00:45,740 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-10 21:13:50] 2025-10-10 19:00:45,740 | INFO     | pilot state: finished 
[2025-10-10 21:13:50] 2025-10-10 19:00:45,741 | INFO     | transexitcode: 0
[2025-10-10 21:13:50] 2025-10-10 19:00:45,741 | INFO     | exeerrorcode: 0
[2025-10-10 21:13:50] 2025-10-10 19:00:45,741 | INFO     | exeerrordiag: 
[2025-10-10 21:13:50] 2025-10-10 19:00:45,741 | INFO     | exitcode: 0
[2025-10-10 21:13:50] 2025-10-10 19:00:45,741 | INFO     | exitmsg: OK
[2025-10-10 21:13:50] 2025-10-10 19:00:45,741 | INFO     | cpuconsumptiontime: 28094 s
[2025-10-10 21:13:50] 2025-10-10 19:00:45,741 | INFO     | nevents: 400
[2025-10-10 21:13:50] 2025-10-10 19:00:45,741 | INFO     | neventsw: 0
[2025-10-10 21:13:50] 2025-10-10 19:00:45,741 | INFO     | pid: 3950874
[2025-10-10 21:13:50] 2025-10-10 19:00:45,741 | INFO     | pgrp: 3950874
[2025-10-10 21:13:50] 2025-10-10 19:00:45,741 | INFO     | corecount: 4
[2025-10-10 21:13:50] 2025-10-10 19:00:45,741 | INFO     | event service: False
[2025-10-10 21:13:50] 2025-10-10 19:00:45,741 | INFO     | sizes: {0: 2348605, 1: 2348804, 5: 2349066, 12: 2349122, 7317: 2376571, 7319: 2385591, 7321: 2385775, 7328: 2385969}
[2025-10-10 21:13:50] 2025-10-10 19:00:45,741 | INFO     | --------------------------------------------------
[2025-10-10 21:13:50] 2025-10-10 19:00:45,742 | INFO     | 
[2025-10-10 21:13:50] 2025-10-10 19:00:45,742 | INFO     | executing command: ls -lF /scratch/boinc/var/slot32/slots/0
[2025-10-10 21:13:50] 2025-10-10 19:00:45,760 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-10 21:13:50] 2025-10-10 19:00:45,760 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-10 21:13:50] 2025-10-10 19:00:45,760 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-10 21:13:50] 2025-10-10 19:00:45,760 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-10 21:13:50] 2025-10-10 19:00:45,760 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-10 21:13:50] 2025-10-10 19:00:45,761 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-10 21:13:50] 2025-10-10 19:00:45,761 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-10 21:13:50] 2025-10-10 19:00:45,761 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-10 21:13:50] 2025-10-10 19:00:45,761 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-10 21:13:50] 2025-10-10 19:00:45,761 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-10 21:13:50] 2025-10-10 19:00:45,761 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-10 21:13:50] 2025-10-10 19:00:45,761 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-10 21:13:50] 2025-10-10 19:00:45,761 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-10 21:13:50] 2025-10-10 19:00:45,761 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-10 21:13:50] 2025-10-10 19:00:45,761 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-10 21:13:50] 2025-10-10 19:00:45,761 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-10 21:13:50] 2025-10-10 19:00:45,761 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-10 21:13:50] 2025-10-10 19:00:45,762 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-10 21:13:50] 2025-10-10 19:00:45,762 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-10 21:13:50] 2025-10-10 19:00:45,762 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-10 21:13:50] 2025-10-10 19:00:45,762 | INFO     | job 6832426258 has completed (purged errors)
[2025-10-10 21:13:50] 2025-10-10 19:00:45,762 | INFO     | overall cleanup function is called
[2025-10-10 21:13:50] 2025-10-10 19:00:46,769 | INFO     | --- collectZombieJob: --- 10, [3950874]
[2025-10-10 21:13:50] 2025-10-10 19:00:46,770 | INFO     | zombie collector waiting for pid 3950874
[2025-10-10 21:13:50] 2025-10-10 19:00:46,770 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-10 21:13:50] 2025-10-10 19:00:46,770 | INFO     | collected zombie processes
[2025-10-10 21:13:50] 2025-10-10 19:00:46,770 | INFO     | will attempt to kill all subprocesses of pid=3950874
[2025-10-10 21:13:50] 2025-10-10 19:00:47,094 | INFO     | process IDs to be killed: [3950874] (in reverse order)
[2025-10-10 21:13:50] 2025-10-10 19:00:47,188 | WARNING  | found no corresponding commands to process id(s)
[2025-10-10 21:13:50] 2025-10-10 19:00:47,189 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-10 21:13:50] 2025-10-10 19:00:47,199 | INFO     | did not find any defunct processes belonging to 3950874
[2025-10-10 21:13:50] 2025-10-10 19:00:47,210 | INFO     | did not find any defunct processes belonging to 3950874
[2025-10-10 21:13:50] 2025-10-10 19:00:47,210 | INFO     | ready for new job
[2025-10-10 21:13:50] 2025-10-10 19:00:47,210 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-10 21:13:50] 2025-10-10 19:00:47,212 | INFO     | ***************************************
[2025-10-10 21:13:50] 2025-10-10 19:00:47,212 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-10 21:13:50] 2025-10-10 19:00:47,212 | INFO     | ***************************************
[2025-10-10 21:13:50] 2025-10-10 19:00:47,213 | INFO     | 
[2025-10-10 21:13:50] 2025-10-10 19:00:47,216 | INFO     | architecture information:
[2025-10-10 21:13:50] 2025-10-10 19:00:47,216 | INFO     | executing command: cat /etc/os-release
[2025-10-10 21:13:50] 2025-10-10 19:00:47,230 | INFO     | cat /etc/os-release:
[2025-10-10 21:13:50] NAME="CentOS Linux"
[2025-10-10 21:13:50] VERSION="7 (Core)"
[2025-10-10 21:13:50] ID="centos"
[2025-10-10 21:13:50] ID_LIKE="rhel fedora"
[2025-10-10 21:13:50] VERSION_ID="7"
[2025-10-10 21:13:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-10 21:13:50] ANSI_COLOR="0;31"
[2025-10-10 21:13:50] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-10 21:13:50] HOME_URL="https://www.centos.org/"
[2025-10-10 21:13:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-10 21:13:50] 
[2025-10-10 21:13:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-10 21:13:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-10 21:13:50] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-10 21:13:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-10 21:13:50] 
[2025-10-10 21:13:50] 2025-10-10 19:00:47,230 | INFO     | ***************************************
[2025-10-10 21:13:50] 2025-10-10 19:00:47,733 | INFO     | executing command: df -mP /scratch/boinc/var/slot32/slots/0
[2025-10-10 21:13:50] 2025-10-10 19:00:47,747 | INFO     | sufficient remaining disk space (695398825984 B)
[2025-10-10 21:13:50] 2025-10-10 19:00:47,747 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-10 21:13:50] 2025-10-10 19:00:47,747 | INFO     | current server update state: UPDATING_FINAL
[2025-10-10 21:13:50] 2025-10-10 19:00:47,748 | INFO     | update_server=False
[2025-10-10 21:13:50] 2025-10-10 19:00:47,748 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-10 21:13:50] 2025-10-10 19:00:47,748 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-10 21:13:50] 2025-10-10 19:00:48,163 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-10 21:13:50] 2025-10-10 19:00:48,163 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-10 21:13:50] 2025-10-10 19:00:48,163 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-10 21:13:50] 2025-10-10 19:00:48,163 | INFO     | will abort loop
[2025-10-10 21:13:50] 2025-10-10 19:00:48,352 | INFO     | all job control threads have been joined
[2025-10-10 21:13:50] 2025-10-10 19:00:48,753 | INFO     | [job] retrieve thread has finished
[2025-10-10 21:13:50] 2025-10-10 19:00:48,811 | INFO     | all data control threads have been joined
[2025-10-10 21:13:50] 2025-10-10 19:00:48,813 | INFO     | [job] validate thread has finished
[2025-10-10 21:13:50] 2025-10-10 19:00:48,957 | INFO     | [payload] validate_post thread has finished
[2025-10-10 21:13:50] 2025-10-10 19:00:49,074 | INFO     | [payload] failed_post thread has finished
[2025-10-10 21:13:50] 2025-10-10 19:00:49,098 | INFO     | all payload control threads have been joined
[2025-10-10 21:13:50] 2025-10-10 19:00:49,104 | INFO     | [data] copytool_in thread has finished
[2025-10-10 21:13:50] 2025-10-10 19:00:49,168 | INFO     | [job] job monitor thread has finished
[2025-10-10 21:13:50] 2025-10-10 19:00:49,169 | INFO     | [job] create_data_payload thread has finished
[2025-10-10 21:13:50] 2025-10-10 19:00:49,313 | INFO     | [payload] validate_pre thread has finished
[2025-10-10 21:13:50] 2025-10-10 19:00:49,354 | INFO     | [job] control thread has finished
[2025-10-10 21:13:50] 2025-10-10 19:00:49,563 | INFO     | [payload] execute_payloads thread has finished
[2025-10-10 21:13:50] 2025-10-10 19:00:49,753 | INFO     | [data] copytool_out thread has finished
[2025-10-10 21:13:50] 2025-10-10 19:00:49,817 | INFO     | [data] control thread has finished
[2025-10-10 21:13:50] 2025-10-10 19:00:49,818 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-10 21:13:50] 2025-10-10 19:00:49,979 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-10 21:13:50] 2025-10-10 19:00:50,103 | INFO     | [payload] control thread has finished
[2025-10-10 21:13:50] 2025-10-10 19:00:50,750 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-10 21:13:50] 2025-10-10 19:00:51,756 | INFO     | [job] queue monitor thread has finished
[2025-10-10 21:13:50] 2025-10-10 19:00:53,823 | INFO     | [data] queue_monitor thread has finished
[2025-10-10 21:13:50] 2025-10-10 19:01:18,151 | INFO     | PID=3943936 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-10 21:13:50] 2025-10-10 19:01:18,152 | INFO     | .. there are 3 such processes running
[2025-10-10 21:13:50] 2025-10-10 19:01:18,152 | INFO     | found 0 job(s) in 20 queues
[2025-10-10 21:13:50] 2025-10-10 19:01:18,153 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-10 21:13:50] 2025-10-10 19:01:18,153 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-10 21:13:50] 2025-10-10 19:01:31,826 | INFO     | [monitor] cgroup control has ended
[2025-10-10 21:13:50] 2025-10-10 19:01:33,462 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23171975464768)>', '<ExcThread(monitor, started 23171736499968)>']
[2025-10-10 21:13:50] 2025-10-10 19:01:34,210 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-10 21:13:50] 2025-10-10 19:01:34,210 | INFO     | [monitor] control thread has ended
[2025-10-10 21:13:50] 2025-10-10 19:01:38,481 | INFO     | all workflow threads have been joined
[2025-10-10 21:13:50] 2025-10-10 19:01:38,481 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-10 21:13:50] 2025-10-10 19:01:38,481 | INFO     | traces error code: 0
[2025-10-10 21:13:50] 2025-10-10 19:01:38,482 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-10 21:13:50] 2025-10-10 19:01:38,606 [wrapper] ==== pilot stdout END ====
[2025-10-10 21:13:50] 2025-10-10 19:01:38,608 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-10 21:13:50] 2025-10-10 19:01:38,611 [wrapper] pilotpid: 3943936
[2025-10-10 21:13:50] 2025-10-10 19:01:38,614 [wrapper] Pilot exit status: 0
[2025-10-10 21:13:50] 2025-10-10 19:01:38,624 [wrapper] pandaids: 6832426258
[2025-10-10 21:13:50] 2025-10-10 19:01:38,694 [wrapper] cleanup supervisor_pilot 4050091 3943937
[2025-10-10 21:13:50] 2025-10-10 19:01:38,697 [wrapper] Test setup, not cleaning
[2025-10-10 21:13:50] 2025-10-10 19:01:38,699 [wrapper] apfmon messages muted
[2025-10-10 21:13:50] 2025-10-10 19:01:38,701 [wrapper] ==== wrapper stdout END ====
[2025-10-10 21:13:50] 2025-10-10 19:01:38,704 [wrapper] ==== wrapper stderr END ====
[2025-10-10 21:13:50]  *** Error codes and diagnostics ***
[2025-10-10 21:13:50]     "exeErrorCode": 0,
[2025-10-10 21:13:50]     "exeErrorDiag": "",
[2025-10-10 21:13:50]     "pilotErrorCode": 0,
[2025-10-10 21:13:50]     "pilotErrorDiag": "",
[2025-10-10 21:13:50]  *** Listing of results directory ***
[2025-10-10 21:13:50] total 392504
[2025-10-10 21:13:50] -rw-r--r-- 1 boinc boinc    552446 Oct  6 08:44 pilot3.tar.gz
[2025-10-10 21:13:50] -rw-r--r-- 1 boinc boinc      5112 Oct  6 08:48 queuedata.json
[2025-10-10 21:13:50] -rwx------ 1 boinc boinc     36292 Oct  6 08:49 runpilot2-wrapper.sh
[2025-10-10 21:13:50] -rw-r--r-- 1 boinc boinc       100 Oct 10 18:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-10 21:13:50] -rwxr-xr-x 1 boinc boinc      7986 Oct 10 18:30 run_atlas
[2025-10-10 21:13:50] -rw-r--r-- 1 boinc boinc       105 Oct 10 18:30 job.xml
[2025-10-10 21:13:50] -rw-r--r-- 1 boinc boinc      6634 Oct 10 18:58 init_data.xml
[2025-10-10 21:13:50] -rw-r--r-- 2 boinc boinc 212906674 Oct 10 18:58 EVNT.46376901._003977.pool.root.1
[2025-10-10 21:13:50] drwxrwx--x 2 boinc boinc      4096 Oct 10 18:58 shared
[2025-10-10 21:13:50] -rw-r--r-- 2 boinc boinc    565604 Oct 10 18:58 input.tar.gz
[2025-10-10 21:13:50] -rw-r--r-- 2 boinc boinc     15120 Oct 10 18:58 start_atlas.sh
[2025-10-10 21:13:50] -rw-r--r-- 1 boinc boinc         0 Oct 10 18:58 boinc_lockfile
[2025-10-10 21:13:50] -rw-r--r-- 1 boinc boinc      2518 Oct 10 18:58 pandaJob.out
[2025-10-10 21:13:50] -rw------- 1 boinc boinc    975525 Oct 10 18:58 agis_schedconf.cvmfs.json
[2025-10-10 21:13:50] -rw------- 1 boinc boinc   1560580 Oct 10 18:58 agis_ddmendpoints.agis.ALL.json
[2025-10-10 21:13:50] drwx------ 4 boinc boinc      4096 Oct 10 18:58 pilot3
[2025-10-10 21:13:50] -rw------- 1 boinc boinc 182377880 Oct 10 21:00 HITS.46376905._107311.pool.root.1
[2025-10-10 21:13:50] -rw-r--r-- 1 boinc boinc       528 Oct 10 21:00 boinc_task_state.xml
[2025-10-10 21:13:50] -rw------- 1 boinc boinc      1029 Oct 10 21:00 memory_monitor_summary.json
[2025-10-10 21:13:50] -rw------- 1 boinc boinc    308013 Oct 10 21:00 log.46376905._107311.job.log.tgz.1
[2025-10-10 21:13:50] -rw------- 1 boinc boinc      7819 Oct 10 21:00 heartbeat.json
[2025-10-10 21:13:50] -rw------- 1 boinc boinc        95 Oct 10 21:01 pilot_heartbeat.json
[2025-10-10 21:13:50] -rw------- 1 boinc boinc      5019 Oct 10 21:01 pilotlog.txt
[2025-10-10 21:13:50] -rw------- 1 boinc boinc   1062015 Oct 10 21:01 log.46376905._107311.job.log.1
[2025-10-10 21:13:50] -rw------- 1 boinc boinc       357 Oct 10 21:01 output.list
[2025-10-10 21:13:50] -rw-r--r-- 1 boinc boinc       620 Oct 10 21:01 runtime_log
[2025-10-10 21:13:50] -rw------- 1 boinc boinc   1392640 Oct 10 21:01 result.tar.gz
[2025-10-10 21:13:50] -rw-r--r-- 1 boinc boinc      9069 Oct 10 21:01 runtime_log.err
[2025-10-10 21:13:50] -rw------- 1 boinc boinc       661 Oct 10 21:01 VOSNDmkDuP8n9Rq4apOajLDm4fhM0noT9bVof3QYDmVkIMDm6rGcHn.diag
[2025-10-10 21:13:50] -rw-r--r-- 1 boinc boinc        27 Oct 10 21:13 wrapper_checkpoint.txt
[2025-10-10 21:13:50] -rw-r--r-- 1 boinc boinc      8192 Oct 10 21:13 boinc_mmap_file
[2025-10-10 21:13:50] -rw-r--r-- 1 boinc boinc     20768 Oct 10 21:13 stderr.txt
[2025-10-10 21:13:50] HITS file was successfully produced:
[2025-10-10 21:13:50] -rw------- 1 boinc boinc 182377880 Oct 10 21:00 shared/HITS.pool.root.1
[2025-10-10 21:13:50]  *** Contents of shared directory: ***
[2025-10-10 21:13:50] total 387964
[2025-10-10 21:13:50] -rw-r--r-- 2 boinc boinc 212906674 Oct 10 18:58 ATLAS.root_0
[2025-10-10 21:13:50] -rw-r--r-- 2 boinc boinc    565604 Oct 10 18:58 input.tar.gz
[2025-10-10 21:13:50] -rw-r--r-- 2 boinc boinc     15120 Oct 10 18:58 start_atlas.sh
[2025-10-10 21:13:50] -rw------- 1 boinc boinc 182377880 Oct 10 21:00 HITS.pool.root.1
[2025-10-10 21:13:50] -rw------- 1 boinc boinc   1392640 Oct 10 21:01 result.tar.gz
21:13:52 (3939830): run_atlas exited; CPU time 28368.006963
21:13:52 (3939830): called boinc_finish(0)

</stderr_txt>
]]>

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