Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:19:23 (31099): wrapper (7.7.26015): starting
09:19:23 (31099): wrapper: running run_atlas (--nthreads 8)
[2025-10-08 09:19:23] Arguments: --nthreads 8
[2025-10-08 09:19:23] Threads: 8
[2025-10-08 09:19:23] Checking for CVMFS
[2025-10-08 09:19:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 09:19:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 09:19:26] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 09:19:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 09:19:27] 2.11.2.0 11525 17568 79980 151464 3 11 22941013 25165824 4632 130560 0 3957648 99.962 1009195 913 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-08 09:19:27] CVMFS is ok
[2025-10-08 09:19:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 09:19:27] Checking for apptainer binary...
[2025-10-08 09:19:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 09:19:27] Running /usr/bin/apptainer --version
[2025-10-08 09:19:27] apptainer version 1.3.2-1.el7
[2025-10-08 09:19:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 09:19:48] cg-vwn415.simple-grid.lan
[2025-10-08 09:19:48] apptainer works
[2025-10-08 09:19:48] Set ATHENA_PROC_NUMBER=8
[2025-10-08 09:19:48] Set ATHENA_CORE_NUMBER=8
[2025-10-08 09:19:48] Starting ATLAS job with PandaID=6831736511
[2025-10-08 09:19:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-08 12:52:51]  *** The last 200 lines of the pilot log: ***
[2025-10-08 12:52:51] 2025-10-08 10:51:54,292 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-08 12:52:51] 2025-10-08 10:51:54,296 | INFO     | fitting pss+swap vs Time
[2025-10-08 12:52:51] 2025-10-08 10:51:54,297 | INFO     | sum of square deviations: 2334722845.0
[2025-10-08 12:52:51] 2025-10-08 10:51:54,298 | INFO     | sum of deviations: 29278396279.5
[2025-10-08 12:52:51] 2025-10-08 10:51:54,298 | INFO     | mean x: 1759914623.5
[2025-10-08 12:52:51] 2025-10-08 10:51:54,299 | INFO     | mean y: 2452999.6275510206
[2025-10-08 12:52:51] 2025-10-08 10:51:54,299 | INFO     | -- intersect: -22067608924.5406
[2025-10-08 12:52:51] 2025-10-08 10:51:54,299 | INFO     | intersect: -22067608924.5406
[2025-10-08 12:52:51] 2025-10-08 10:51:54,299 | INFO     | chi2: 5.652175993188226
[2025-10-08 12:52:51] 2025-10-08 10:51:54,300 | INFO     | sum of square deviations: 2160561440.0
[2025-10-08 12:52:51] 2025-10-08 10:51:54,301 | INFO     | sum of deviations: 41546708563.00002
[2025-10-08 12:52:51] 2025-10-08 10:51:54,301 | INFO     | mean x: 1759914471.0
[2025-10-08 12:52:51] 2025-10-08 10:51:54,301 | INFO     | mean y: 2463508.842931937
[2025-10-08 12:52:51] 2025-10-08 10:51:54,301 | INFO     | -- intersect: -33839968494.591953
[2025-10-08 12:52:51] 2025-10-08 10:51:54,301 | INFO     | intersect: -33839968494.591953
[2025-10-08 12:52:51] 2025-10-08 10:51:54,302 | INFO     | chi2: 4.937201205142234
[2025-10-08 12:52:51] 2025-10-08 10:51:54,302 | INFO     | current chi2=4.937201205142234 (change=12.64954928699408 %)
[2025-10-08 12:52:51] 2025-10-08 10:51:54,302 | INFO     | right removable region: 190
[2025-10-08 12:52:51] 2025-10-08 10:51:54,302 | INFO     | sum of square deviations: 2160561440.0
[2025-10-08 12:52:51] 2025-10-08 10:51:54,304 | INFO     | sum of deviations: -34112247248.000008
[2025-10-08 12:52:51] 2025-10-08 10:51:54,304 | INFO     | mean x: 1759914776.0
[2025-10-08 12:52:51] 2025-10-08 10:51:54,304 | INFO     | mean y: 2508406.8010471202
[2025-10-08 12:52:51] 2025-10-08 10:51:54,304 | INFO     | -- intersect: 27789104456.724327
[2025-10-08 12:52:51] 2025-10-08 10:51:54,304 | INFO     | intersect: 27789104456.724327
[2025-10-08 12:52:51] 2025-10-08 10:51:54,304 | INFO     | chi2: 1.4514811096547224
[2025-10-08 12:52:51] 2025-10-08 10:51:54,304 | INFO     | current chi2=1.4514811096547224 (change=74.31995904932916 %)
[2025-10-08 12:52:51] 2025-10-08 10:51:54,305 | INFO     | sum of square deviations: 1995283922.5
[2025-10-08 12:52:51] 2025-10-08 10:51:54,306 | INFO     | sum of deviations: -49829341114.50001
[2025-10-08 12:52:51] 2025-10-08 10:51:54,306 | INFO     | mean x: 1759914928.5
[2025-10-08 12:52:51] 2025-10-08 10:51:54,306 | INFO     | mean y: 2522741.360215054
[2025-10-08 12:52:51] 2025-10-08 10:51:54,306 | INFO     | -- intersect: 43953862355.64881
[2025-10-08 12:52:51] 2025-10-08 10:51:54,306 | INFO     | intersect: 43953862355.64881
[2025-10-08 12:52:51] 2025-10-08 10:51:54,307 | INFO     | chi2: 0.9777153024139896
[2025-10-08 12:52:51] 2025-10-08 10:51:54,307 | INFO     | current chi2=0.9777153024139896 (change=32.64016349158219 %)
[2025-10-08 12:52:51] 2025-10-08 10:51:54,307 | INFO     | sum of square deviations: 1838657730.0
[2025-10-08 12:52:51] 2025-10-08 10:51:54,309 | INFO     | sum of deviations: -46308531372.0
[2025-10-08 12:52:51] 2025-10-08 10:51:54,309 | INFO     | mean x: 1759915081.0
[2025-10-08 12:52:51] 2025-10-08 10:51:54,309 | INFO     | mean y: 2519274.5635359115
[2025-10-08 12:52:51] 2025-10-08 10:51:54,309 | INFO     | -- intersect: 44327834101.126945
[2025-10-08 12:52:51] 2025-10-08 10:51:54,309 | INFO     | intersect: 44327834101.126945
[2025-10-08 12:52:51] 2025-10-08 10:51:54,309 | INFO     | chi2: 0.9683055413522228
[2025-10-08 12:52:51] 2025-10-08 10:51:54,309 | INFO     | current chi2=0.9683055413522228 (change=0.9624234210648057 %)
[2025-10-08 12:52:51] 2025-10-08 10:51:54,309 | INFO     | left removable region: 30
[2025-10-08 12:52:51] 2025-10-08 10:51:54,310 | INFO     | sum of square deviations: 1270051720.0
[2025-10-08 12:52:51] 2025-10-08 10:51:54,311 | INFO     | sum of deviations: -15485396956.5
[2025-10-08 12:52:51] 2025-10-08 10:51:54,311 | INFO     | mean x: 1759915355.5
[2025-10-08 12:52:51] 2025-10-08 10:51:54,311 | INFO     | mean y: 2512337.90625
[2025-10-08 12:52:51] 2025-10-08 10:51:54,311 | INFO     | -- intersect: 21460684049.021538
[2025-10-08 12:52:51] 2025-10-08 10:51:54,311 | INFO     | intersect: 21460684049.021538
[2025-10-08 12:52:51] 2025-10-08 10:51:54,312 | INFO     | chi2: 0.12800614128759358
[2025-10-08 12:52:51] 2025-10-08 10:51:54,312 | INFO     | -- intersect: 21460684049.021538
[2025-10-08 12:52:51] 2025-10-08 10:51:54,312 | INFO     | current memory leak: -12.19 B/s (using 160 data points, chi2=0.13)
[2025-10-08 12:52:51] 2025-10-08 10:51:54,312 | INFO     | could have reported an average CPU frequency of 1999 MHz (10 samples)
[2025-10-08 12:52:51] 2025-10-08 10:51:54,313 | INFO     | ..............................
[2025-10-08 12:52:51] 2025-10-08 10:51:54,313 | INFO     | . Timing measurements:
[2025-10-08 12:52:51] 2025-10-08 10:51:54,313 | INFO     | . get job = 0 s
[2025-10-08 12:52:51] 2025-10-08 10:51:54,313 | INFO     | . initial setup = 3 s
[2025-10-08 12:52:51] 2025-10-08 10:51:54,313 | INFO     | . payload setup = 127 s
[2025-10-08 12:52:51] 2025-10-08 10:51:54,313 | INFO     | . stage-in = 0 s
[2025-10-08 12:52:51] 2025-10-08 10:51:54,313 | INFO     | . payload execution = 12093 s
[2025-10-08 12:52:51] 2025-10-08 10:51:54,313 | INFO     | . stage-out = 2 s
[2025-10-08 12:52:51] 2025-10-08 10:51:54,314 | INFO     | . log creation = 0 s
[2025-10-08 12:52:51] 2025-10-08 10:51:54,314 | INFO     | ..............................
[2025-10-08 12:52:51] 2025-10-08 10:51:54,625 | INFO     | time since job start (12515s) is within the limit (172800.0s)
[2025-10-08 12:52:51] 2025-10-08 10:51:54,647 | INFO     | 
[2025-10-08 12:52:51] 2025-10-08 10:51:54,648 | INFO     | job summary report
[2025-10-08 12:52:51] 2025-10-08 10:51:54,648 | INFO     | --------------------------------------------------
[2025-10-08 12:52:51] 2025-10-08 10:51:54,648 | INFO     | PanDA job id: 6831736511
[2025-10-08 12:52:51] 2025-10-08 10:51:54,648 | INFO     | task id: 46376905
[2025-10-08 12:52:51] 2025-10-08 10:51:54,648 | INFO     | errors: (none)
[2025-10-08 12:52:51] 2025-10-08 10:51:54,648 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-08 12:52:51] 2025-10-08 10:51:54,648 | INFO     | pilot state: finished 
[2025-10-08 12:52:51] 2025-10-08 10:51:54,648 | INFO     | transexitcode: 0
[2025-10-08 12:52:51] 2025-10-08 10:51:54,648 | INFO     | exeerrorcode: 0
[2025-10-08 12:52:51] 2025-10-08 10:51:54,649 | INFO     | exeerrordiag: 
[2025-10-08 12:52:51] 2025-10-08 10:51:54,649 | INFO     | exitcode: 0
[2025-10-08 12:52:51] 2025-10-08 10:51:54,649 | INFO     | exitmsg: OK
[2025-10-08 12:52:51] 2025-10-08 10:51:54,649 | INFO     | cpuconsumptiontime: 45527 s
[2025-10-08 12:52:51] 2025-10-08 10:51:54,649 | INFO     | nevents: 400
[2025-10-08 12:52:51] 2025-10-08 10:51:54,649 | INFO     | neventsw: 0
[2025-10-08 12:52:51] 2025-10-08 10:51:54,649 | INFO     | pid: 9368
[2025-10-08 12:52:51] 2025-10-08 10:51:54,649 | INFO     | pgrp: 9368
[2025-10-08 12:52:51] 2025-10-08 10:51:54,649 | INFO     | corecount: 8
[2025-10-08 12:52:51] 2025-10-08 10:51:54,649 | INFO     | event service: False
[2025-10-08 12:52:51] 2025-10-08 10:51:54,649 | INFO     | sizes: {0: 2348645, 1: 2348844, 12: 2348844, 23: 2348872, 34: 2348900, 44: 2348928, 55: 2349084, 66: 2349112, 76: 2349140, 87: 2349196, 88: 2349486, 98: 2349794, 1
[2025-10-08 12:52:51] 2025-10-08 10:51:54,649 | INFO     | --------------------------------------------------
[2025-10-08 12:52:51] 2025-10-08 10:51:54,650 | INFO     | 
[2025-10-08 12:52:51] 2025-10-08 10:51:54,650 | INFO     | executing command: ls -lF /var/lib/boinc/slots/4
[2025-10-08 12:52:51] 2025-10-08 10:51:55,287 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-08 12:52:51] 2025-10-08 10:51:55,287 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-08 12:52:51] 2025-10-08 10:51:55,288 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-08 12:52:51] 2025-10-08 10:51:55,288 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-08 12:52:51] 2025-10-08 10:51:55,288 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-08 12:52:51] 2025-10-08 10:51:55,288 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-08 12:52:51] 2025-10-08 10:51:55,288 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-08 12:52:51] 2025-10-08 10:51:55,288 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-08 12:52:51] 2025-10-08 10:51:55,288 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-08 12:52:51] 2025-10-08 10:51:55,289 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-08 12:52:51] 2025-10-08 10:51:55,289 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-08 12:52:51] 2025-10-08 10:51:55,289 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-08 12:52:51] 2025-10-08 10:51:55,289 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-08 12:52:51] 2025-10-08 10:51:55,289 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-08 12:52:51] 2025-10-08 10:51:55,289 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-08 12:52:51] 2025-10-08 10:51:55,289 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-08 12:52:51] 2025-10-08 10:51:55,289 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-08 12:52:51] 2025-10-08 10:51:55,290 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-08 12:52:51] 2025-10-08 10:51:55,290 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-08 12:52:51] 2025-10-08 10:51:55,290 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-08 12:52:51] 2025-10-08 10:51:55,290 | INFO     | job 6831736511 has completed (purged errors)
[2025-10-08 12:52:51] 2025-10-08 10:51:55,290 | INFO     | overall cleanup function is called
[2025-10-08 12:52:51] 2025-10-08 10:51:56,299 | INFO     | --- collectZombieJob: --- 10, [9368]
[2025-10-08 12:52:51] 2025-10-08 10:51:56,300 | INFO     | zombie collector waiting for pid 9368
[2025-10-08 12:52:51] 2025-10-08 10:51:56,300 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-08 12:52:51] 2025-10-08 10:51:56,300 | INFO     | collected zombie processes
[2025-10-08 12:52:51] 2025-10-08 10:51:56,300 | INFO     | will attempt to kill all subprocesses of pid=9368
[2025-10-08 12:52:51] 2025-10-08 10:51:56,370 | INFO     | process IDs to be killed: [9368] (in reverse order)
[2025-10-08 12:52:51] 2025-10-08 10:51:57,452 | WARNING  | found no corresponding commands to process id(s)
[2025-10-08 12:52:51] 2025-10-08 10:51:57,452 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-08 12:52:51] 2025-10-08 10:51:57,455 | INFO     | did not find any defunct processes belonging to 9368
[2025-10-08 12:52:51] 2025-10-08 10:51:57,457 | INFO     | did not find any defunct processes belonging to 9368
[2025-10-08 12:52:51] 2025-10-08 10:51:57,457 | INFO     | ready for new job
[2025-10-08 12:52:51] 2025-10-08 10:51:57,457 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-08 12:52:51] 2025-10-08 10:51:57,459 | INFO     | ***************************************
[2025-10-08 12:52:51] 2025-10-08 10:51:57,459 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-08 12:52:51] 2025-10-08 10:51:57,459 | INFO     | ***************************************
[2025-10-08 12:52:51] 2025-10-08 10:51:57,459 | INFO     | 
[2025-10-08 12:52:51] 2025-10-08 10:51:57,459 | INFO     | pilot is running in a VM
[2025-10-08 12:52:51] 2025-10-08 10:51:57,459 | INFO     | architecture information:
[2025-10-08 12:52:51] 2025-10-08 10:51:57,460 | INFO     | executing command: cat /etc/os-release
[2025-10-08 12:52:51] 2025-10-08 10:51:57,748 | INFO     | cat /etc/os-release:
[2025-10-08 12:52:51] NAME="CentOS Linux"
[2025-10-08 12:52:51] VERSION="7 (Core)"
[2025-10-08 12:52:51] ID="centos"
[2025-10-08 12:52:51] ID_LIKE="rhel fedora"
[2025-10-08 12:52:51] VERSION_ID="7"
[2025-10-08 12:52:51] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-08 12:52:51] ANSI_COLOR="0;31"
[2025-10-08 12:52:51] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-08 12:52:51] HOME_URL="https://www.centos.org/"
[2025-10-08 12:52:51] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-08 12:52:51] 
[2025-10-08 12:52:51] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-08 12:52:51] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-08 12:52:51] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-08 12:52:51] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-08 12:52:51] 
[2025-10-08 12:52:51] 2025-10-08 10:51:57,748 | INFO     | ***************************************
[2025-10-08 12:52:51] 2025-10-08 10:51:58,252 | INFO     | executing command: df -mP /var/lib/boinc/slots/4
[2025-10-08 12:52:51] 2025-10-08 10:51:58,430 | INFO     | sufficient remaining disk space (495944990720 B)
[2025-10-08 12:52:51] 2025-10-08 10:51:58,430 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-08 12:52:51] 2025-10-08 10:51:58,430 | INFO     | current server update state: UPDATING_FINAL
[2025-10-08 12:52:51] 2025-10-08 10:51:58,430 | INFO     | update_server=False
[2025-10-08 12:52:51] 2025-10-08 10:51:58,431 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-08 12:52:51] 2025-10-08 10:51:58,694 | INFO     | all payload control threads have been joined
[2025-10-08 12:52:51] 2025-10-08 10:51:58,789 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-08 12:52:51] 2025-10-08 10:51:58,790 | INFO     | aborting loop
[2025-10-08 12:52:51] 2025-10-08 10:51:58,973 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-08 12:52:51] 2025-10-08 10:51:59,382 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-08 12:52:51] 2025-10-08 10:51:59,395 | INFO     | all job control threads have been joined
[2025-10-08 12:52:51] 2025-10-08 10:51:59,416 | INFO     | all data control threads have been joined
[2025-10-08 12:52:51] 2025-10-08 10:51:59,437 | INFO     | [job] retrieve thread has finished
[2025-10-08 12:52:51] 2025-10-08 10:51:59,456 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-08 12:52:51] 2025-10-08 10:51:59,535 | INFO     | [data] copytool_in thread has finished
[2025-10-08 12:52:51] 2025-10-08 10:51:59,651 | INFO     | [job] validate thread has finished
[2025-10-08 12:52:51] 2025-10-08 10:51:59,673 | INFO     | [payload] execute_payloads thread has finished
[2025-10-08 12:52:51] 2025-10-08 10:51:59,702 | INFO     | [payload] control thread has finished
[2025-10-08 12:52:51] 2025-10-08 10:51:59,746 | INFO     | [job] create_data_payload thread has finished
[2025-10-08 12:52:51] 2025-10-08 10:51:59,796 | INFO     | [job] job monitor thread has finished
[2025-10-08 12:52:51] 2025-10-08 10:52:00,041 | INFO     | [payload] validate_pre thread has finished
[2025-10-08 12:52:51] 2025-10-08 10:52:00,285 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-08 12:52:51] 2025-10-08 10:52:00,402 | INFO     | [job] control thread has finished
[2025-10-08 12:52:51] 2025-10-08 10:52:00,423 | INFO     | [data] control thread has finished
[2025-10-08 12:52:51] 2025-10-08 10:52:00,463 | INFO     | [job] queue monitor thread has finished
[2025-10-08 12:52:51] 2025-10-08 10:52:00,621 | INFO     | [payload] validate_post thread has finished
[2025-10-08 12:52:51] 2025-10-08 10:52:00,702 | INFO     | [payload] failed_post thread has finished
[2025-10-08 12:52:51] 2025-10-08 10:52:01,391 | INFO     | [data] copytool_out thread has finished
[2025-10-08 12:52:51] 2025-10-08 10:52:02,982 | INFO     | [data] queue_monitor thread has finished
[2025-10-08 12:52:51] 2025-10-08 10:52:27,827 | INFO     | PID=2806 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-08 12:52:51] 2025-10-08 10:52:27,827 | INFO     | .. there are 9 such processes running
[2025-10-08 12:52:51] 2025-10-08 10:52:27,828 | INFO     | found 0 job(s) in 20 queues
[2025-10-08 12:52:51] 2025-10-08 10:52:27,828 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-08 12:52:51] 2025-10-08 10:52:27,830 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-08 12:52:51] 2025-10-08 10:52:40,503 | INFO     | [monitor] cgroup control has ended
[2025-10-08 12:52:51] 2025-10-08 10:52:41,511 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140200763639616)>', '<ExcThread(monitor, started 140200307042048)>']
[2025-10-08 12:52:51] 2025-10-08 10:52:41,913 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-08 12:52:51] 2025-10-08 10:52:41,914 | INFO     | [monitor] control thread has ended
[2025-10-08 12:52:51] 2025-10-08 10:52:46,536 | INFO     | all workflow threads have been joined
[2025-10-08 12:52:51] 2025-10-08 10:52:46,537 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-08 12:52:51] 2025-10-08 10:52:46,537 | INFO     | traces error code: 0
[2025-10-08 12:52:51] 2025-10-08 10:52:46,537 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-08 12:52:51] 2025-10-08 10:52:46,926 [wrapper] ==== pilot stdout END ====
[2025-10-08 12:52:51] 2025-10-08 10:52:46,979 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-08 12:52:51] 2025-10-08 10:52:47,032 [wrapper] pilotpid: 2806
[2025-10-08 12:52:51] 2025-10-08 10:52:47,137 [wrapper] Pilot exit status: 0
[2025-10-08 12:52:51] 2025-10-08 10:52:47,537 [wrapper] pandaids: 6831736511
[2025-10-08 12:52:51] 2025-10-08 10:52:48,470 [wrapper] cleanup supervisor_pilot 30864 2807
[2025-10-08 12:52:51] 2025-10-08 10:52:48,591 [wrapper] Test setup, not cleaning
[2025-10-08 12:52:51] 2025-10-08 10:52:48,665 [wrapper] apfmon messages muted
[2025-10-08 12:52:51] 2025-10-08 10:52:48,776 [wrapper] ==== wrapper stdout END ====
[2025-10-08 12:52:51] 2025-10-08 10:52:48,869 [wrapper] ==== wrapper stderr END ====
[2025-10-08 12:52:51]  *** Error codes and diagnostics ***
[2025-10-08 12:52:51]     "exeErrorCode": 0,
[2025-10-08 12:52:51]     "exeErrorDiag": "",
[2025-10-08 12:52:51]     "pilotErrorCode": 0,
[2025-10-08 12:52:51]     "pilotErrorDiag": "",
[2025-10-08 12:52:51]  *** Listing of results directory ***
[2025-10-08 12:52:51] total 392212
[2025-10-08 12:52:51] -rw-r--r--. 1 boinc boinc    552446 Oct  5 17:32 pilot3.tar.gz
[2025-10-08 12:52:51] -rw-r--r--. 1 boinc boinc      5112 Oct  5 17:34 queuedata.json
[2025-10-08 12:52:51] -rwx------. 1 boinc boinc     36292 Oct  5 17:34 runpilot2-wrapper.sh
[2025-10-08 12:52:51] -rw-r--r--. 1 boinc boinc       100 Oct  8 09:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-08 12:52:51] -rwxr-xr-x. 1 boinc boinc      7986 Oct  8 09:19 run_atlas
[2025-10-08 12:52:51] -rw-r--r--. 1 boinc boinc       105 Oct  8 09:19 job.xml
[2025-10-08 12:52:51] -rw-r--r--. 1 boinc boinc      6391 Oct  8 09:19 init_data.xml
[2025-10-08 12:52:51] -rw-r--r--. 2 boinc boinc 215947337 Oct  8 09:19 EVNT.46376901._003250.pool.root.1
[2025-10-08 12:52:51] -rw-r--r--. 2 boinc boinc     15120 Oct  8 09:19 start_atlas.sh
[2025-10-08 12:52:51] drwxrwx--x. 2 boinc boinc        68 Oct  8 09:19 shared
[2025-10-08 12:52:51] -rw-r--r--. 2 boinc boinc    565600 Oct  8 09:19 input.tar.gz
[2025-10-08 12:52:51] -rw-r--r--. 1 boinc boinc         0 Oct  8 09:19 boinc_lockfile
[2025-10-08 12:52:51] -rw-r--r--. 1 boinc boinc      2519 Oct  8 09:19 pandaJob.out
[2025-10-08 12:52:51] -rw-------. 1 boinc boinc    979849 Oct  8 09:23 agis_schedconf.cvmfs.json
[2025-10-08 12:52:51] drwx------. 4 boinc boinc      4096 Oct  8 09:23 pilot3
[2025-10-08 12:52:51] -rw-------. 1 boinc boinc 177598194 Oct  8 12:48 HITS.46376905._088400.pool.root.1
[2025-10-08 12:52:51] -rw-r--r--. 1 boinc boinc       531 Oct  8 12:49 boinc_task_state.xml
[2025-10-08 12:52:51] -rw-------. 1 boinc boinc      1014 Oct  8 12:50 memory_monitor_summary.json
[2025-10-08 12:52:51] -rw-------. 1 boinc boinc   1560401 Oct  8 12:50 agis_ddmendpoints.agis.ALL.json
[2025-10-08 12:52:51] -rw-------. 1 boinc boinc    432929 Oct  8 12:50 log.46376905._088400.job.log.tgz.1
[2025-10-08 12:52:51] -rw-------. 1 boinc boinc      7793 Oct  8 12:51 heartbeat.json
[2025-10-08 12:52:51] -rw-r--r--. 1 boinc boinc      8192 Oct  8 12:52 boinc_mmap_file
[2025-10-08 12:52:51] -rw-r--r--. 1 boinc boinc        28 Oct  8 12:52 wrapper_checkpoint.txt
[2025-10-08 12:52:51] -rw-------. 1 boinc boinc        95 Oct  8 12:52 pilot_heartbeat.json
[2025-10-08 12:52:51] -rw-------. 1 boinc boinc      4883 Oct  8 12:52 pilotlog.txt
[2025-10-08 12:52:51] -rw-------. 1 boinc boinc   1667288 Oct  8 12:52 log.46376905._088400.job.log.1
[2025-10-08 12:52:51] -rw-------. 1 boinc boinc       357 Oct  8 12:52 output.list
[2025-10-08 12:52:51] -rw-r--r--. 1 boinc boinc       620 Oct  8 12:52 runtime_log
[2025-10-08 12:52:51] -rw-------. 1 boinc boinc   2119680 Oct  8 12:52 result.tar.gz
[2025-10-08 12:52:51] -rw-r--r--. 1 boinc boinc      8703 Oct  8 12:52 runtime_log.err
[2025-10-08 12:52:51] -rw-------. 1 boinc boinc       657 Oct  8 12:52 JOKMDmgvfP8n9Rq4apOajLDm4fhM0noT9bVof3QYDmNgGMDmzT6iTn.diag
[2025-10-08 12:52:51] -rw-r--r--. 1 boinc boinc     20549 Oct  8 12:52 stderr.txt
[2025-10-08 12:52:51] HITS file was successfully produced:
[2025-10-08 12:52:51] -rw-------. 1 boinc boinc 177598194 Oct  8 12:48 shared/HITS.pool.root.1
[2025-10-08 12:52:51]  *** Contents of shared directory: ***
[2025-10-08 12:52:51] total 386968
[2025-10-08 12:52:51] -rw-r--r--. 2 boinc boinc 215947337 Oct  8 09:19 ATLAS.root_0
[2025-10-08 12:52:51] -rw-r--r--. 2 boinc boinc     15120 Oct  8 09:19 start_atlas.sh
[2025-10-08 12:52:51] -rw-r--r--. 2 boinc boinc    565600 Oct  8 09:19 input.tar.gz
[2025-10-08 12:52:51] -rw-------. 1 boinc boinc 177598194 Oct  8 12:48 HITS.pool.root.1
[2025-10-08 12:52:51] -rw-------. 1 boinc boinc   2119680 Oct  8 12:52 result.tar.gz
12:52:53 (31099): run_atlas exited; CPU time 45687.529894
12:52:53 (31099): called boinc_finish(0)

</stderr_txt>
]]>

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