Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
2025-10-11 06:01:29 (7724): vboxwrapper version 26210
2025-10-11 06:01:29 (7724): BOINC client version: 8.2.4
2025-10-11 06:01:30 (7724): Detected: VirtualBox VboxManage Interface (Version: 7.1.6)
2025-10-11 06:01:30 (7724): Successfully copied 'init_data.xml' to the shared directory.
2025-10-11 06:01:30 (7724): Create VM. (boinc_e642b340b745e24b, slot#0)
2025-10-11 06:01:31 (7724): Setting Memory Size for VM. (4200MB)
2025-10-11 06:01:31 (7724): Setting CPU Count for VM. (2)
2025-10-11 06:01:31 (7724): Setting Chipset Options for VM.
2025-10-11 06:01:32 (7724): Setting Graphics Controller Options for VM. (Driver: VBoxVGA, 16MB)
2025-10-11 06:01:32 (7724): Setting Boot Options for VM.
2025-10-11 06:01:32 (7724): Setting Network Configuration for NAT. (Driver: virtio)
2025-10-11 06:01:33 (7724): Enabling VM Network Access.
2025-10-11 06:01:33 (7724): Disabling USB Support for VM.
2025-10-11 06:01:33 (7724): Disabling COM Port Support for VM.
2025-10-11 06:01:33 (7724): Disabling LPT Port Support for VM.
2025-10-11 06:01:34 (7724): Disabling Audio Support for VM.
2025-10-11 06:01:34 (7724): Disabling Clipboard Support for VM.
2025-10-11 06:01:34 (7724): Disabling Drag and Drop Support for VM.
2025-10-11 06:01:34 (7724): Adding storage controller(s) to VM.
2025-10-11 06:01:35 (7724): Adding virtual disk drive to VM. (ATLAS_vbox_3.03_image.vdi)
2025-10-11 06:01:37 (7724): Adding VirtualBox Guest Additions to VM.
2025-10-11 06:01:37 (7724): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2025-10-11 06:01:37 (7724): forwarding host port 58283 to guest port 80
2025-10-11 06:01:38 (7724): Enabling remote desktop for VM.
2025-10-11 06:01:38 (7724): Enabling shared directory for VM.
2025-10-11 06:01:39 (7724): Starting VM using VBoxManage interface. (boinc_e642b340b745e24b, slot#0)
2025-10-11 06:01:45 (7724): Successfully started VM. (PID = '7704')
2025-10-11 06:01:45 (7724): Reporting VM Process ID to BOINC.
2025-10-11 06:01:45 (7724): Guest Log: BIOS: VirtualBox 7.1.6
2025-10-11 06:01:45 (7724): Guest Log: CPUID EDX: 0x178bfbff
2025-10-11 06:01:45 (7724): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2025-10-11 06:01:45 (7724): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2025-10-11 06:01:45 (7724): VM state change detected. (old = 'poweredoff', new = 'running')
2025-10-11 06:01:45 (7724): Detected: Web Application Enabled (http://localhost:58283)
2025-10-11 06:01:45 (7724): Detected: Remote Desktop Enabled (localhost:58284)
2025-10-11 06:01:45 (7724): Preference change detected
2025-10-11 06:01:45 (7724): Setting CPU throttle for VM. (100%)
2025-10-11 06:01:45 (7724): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 600 seconds) or (Vbox_job.xml: 900 seconds))
2025-10-11 06:01:47 (7724): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2025-10-11 06:01:47 (7724): Guest Log: BIOS: Booting from Hard Disk...
2025-10-11 06:01:50 (7724): Guest Log: BIOS: KBD: unsupported int 16h function 03
2025-10-11 06:01:50 (7724): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2025-10-11 06:01:50 (7724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2025-10-11 06:01:50 (7724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2025-10-11 06:01:50 (7724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2025-10-11 06:01:50 (7724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2025-10-11 06:01:50 (7724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2025-10-11 06:01:50 (7724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2025-10-11 06:01:50 (7724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2025-10-11 06:01:50 (7724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2025-10-11 06:01:50 (7724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2025-10-11 06:01:50 (7724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2025-10-11 06:01:50 (7724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2025-10-11 06:01:50 (7724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2025-10-11 06:01:50 (7724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2025-10-11 06:01:50 (7724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2025-10-11 06:01:50 (7724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2025-10-11 06:01:50 (7724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2025-10-11 06:01:50 (7724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2025-10-11 06:01:50 (7724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2025-10-11 06:01:50 (7724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2025-10-11 06:01:50 (7724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2025-10-11 06:01:50 (7724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2025-10-11 06:01:50 (7724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2025-10-11 06:01:50 (7724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2025-10-11 06:01:50 (7724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2025-10-11 06:01:50 (7724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2025-10-11 06:01:50 (7724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2025-10-11 06:01:50 (7724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2025-10-11 06:01:50 (7724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2025-10-11 06:01:50 (7724): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2025-10-11 06:01:50 (7724): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2025-10-11 06:01:58 (7724): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2025-10-11 06:01:58 (7724): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2025-10-11 06:02:12 (7724): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2025-10-11 06:02:12 (7724): Guest Log: 00:00:00.000236 main     Log opened 2025-10-11T06:02:10.628912000Z
2025-10-11 06:02:12 (7724): Guest Log: 00:00:00.000398 main     OS Product: Linux
2025-10-11 06:02:12 (7724): Guest Log: 00:00:00.000446 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2025-10-11 06:02:12 (7724): Guest Log: 00:00:00.000512 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2025-10-11 06:02:12 (7724): Guest Log: 00:00:00.000564 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2025-10-11 06:02:12 (7724): Guest Log: 00:00:00.000565 main     Process ID: 1291
2025-10-11 06:02:12 (7724): Guest Log: 00:00:00.000567 main     Package type: LINUX_64BITS_GENERIC
2025-10-11 06:02:12 (7724): Guest Log: 00:00:00.015429 main     5.2.32 r132073 started. Verbose level = 0
2025-10-11 06:02:12 (7724): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2025-10-11 06:02:12 (7724): Guest Log: [INFO] Mounting shared directory
2025-10-11 06:02:12 (7724): Guest Log: [INFO] Checking for init_data.xml
2025-10-11 06:02:22 (7724): Guest Log: 00:00:10.114182 timesync vgsvcTimeSyncWorker: Radical guest time change: -7 188 285 766 000ns (GuestNow=1 760 155 342 391 522 000 ns GuestLast=1 760 162 530 677 288 000 ns fSetTimeLastLoop=true )
2025-10-11 06:03:13 (7724): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2025-10-11 06:03:13 (7724): Guest Log: [INFO] Detected branch: prod
2025-10-11 06:03:13 (7724): Guest Log: This is the prod version of the ATLAS job wrapper
2025-10-11 06:03:13 (7724): Guest Log: Copying input files
2025-10-11 06:03:15 (7724): Guest Log: Copied input files into RunAtlas.
2025-10-11 06:03:15 (7724): Guest Log: Detected user-configured HTTP proxy at http://192.168.35.184:3128 - will set in /etc/cvmfs/default.local
2025-10-11 06:03:49 (7724): Guest Log: Running cvmfs_config stat atlas.cern.ch
2025-10-11 06:03:49 (7724): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2025-10-11 06:03:49 (7724): Guest Log: 2.6.3.0 1585 0 31556 151571 4 1 3117639 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.35.184:3128 1
2025-10-11 06:03:51 (7724): Guest Log: copied the webapp to /var/www
2025-10-11 06:03:51 (7724): Guest Log: ATHENA_PROC_NUMBER=2
2025-10-11 06:03:51 (7724): Guest Log: ATHENA_CORE_NUMBER=2
2025-10-11 06:03:51 (7724): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2025-10-11 06:03:51 (7724): Guest Log:  *** Starting ATLAS job. (PandaID=6835801667 taskID=46676269) ***
2025-10-11 07:41:54 (7724): Status Report: Elapsed Time: '6000.000000'
2025-10-11 07:41:54 (7724): Status Report: CPU Time: '10296.859375'
2025-10-11 09:22:10 (7724): Status Report: Elapsed Time: '12000.000000'
2025-10-11 09:22:10 (7724): Status Report: CPU Time: '21585.640625'
2025-10-11 11:02:28 (7724): Status Report: Elapsed Time: '18000.000000'
2025-10-11 11:02:28 (7724): Status Report: CPU Time: '32191.109375'
2025-10-11 12:42:42 (7724): Status Report: Elapsed Time: '24000.000000'
2025-10-11 12:42:42 (7724): Status Report: CPU Time: '42621.140625'
2025-10-11 14:22:53 (7724): Status Report: Elapsed Time: '30000.000000'
2025-10-11 14:22:53 (7724): Status Report: CPU Time: '53061.828125'
2025-10-11 16:03:14 (7724): Status Report: Elapsed Time: '36000.000000'
2025-10-11 16:03:14 (7724): Status Report: CPU Time: '63318.484375'
2025-10-11 17:43:28 (7724): Status Report: Elapsed Time: '42000.000000'
2025-10-11 17:43:28 (7724): Status Report: CPU Time: '73677.812500'
2025-10-11 18:02:45 (7724): Guest Log:  *** Job finished ***
2025-10-11 18:02:45 (7724): Guest Log:  *** The last 20 lines of the pilot log: ***
2025-10-11 18:02:45 (7724): Guest Log: 2025-10-11 16:02:30,539 | INFO     | traces error code: 0
2025-10-11 18:02:45 (7724): Guest Log: 2025-10-11 16:02:30,539 | INFO     | pilot has finished (exit code=0, shell exit code=0)
2025-10-11 18:02:45 (7724): Guest Log: 2025-10-11 16:02:42,744 | INFO     | 43063s have passed since pilot start - server update state is 'UPDATING_FINAL'
2025-10-11 18:02:45 (7724): Guest Log: 2025-10-11 16:02:43,805 | INFO     | PID=5953 has CPU usage=6.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -j managed --pilot-user ATLAS --harvester-submit-mode PUSH -w generic --job-type managed --resource-type MCORE -z -t
2025-10-11 18:02:45 (7724): Guest Log: 2025-10-11 16:02:43,805 | INFO     | found 0 job(s) in 20 queues
2025-10-11 18:02:45 (7724): Guest Log: 2025-10-11 16:02:43,805 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
2025-10-11 18:02:45 (7724): Guest Log: 2025-10-11 16:02:43,805 | WARNING  | will wait for a maximum of 300 s for threads to finish
2025-10-11 18:02:45 (7724): Guest Log: 2025-10-11 16:02:43,806 | WARNING  | job_aborted has been set - aborting pilot monitoring
2025-10-11 18:02:45 (7724): Guest Log: 2025-10-11 16:02:43,806 | CRITICAL | thread 'MainThread' is not alive
2025-10-11 18:02:45 (7724): Guest Log: 2025-10-11 16:02:43,806 | INFO     | [monitor] control thread has ended
2025-10-11 18:02:45 (7724): Guest Log: 2025-10-11 16:02:43,942 [wrapper] ==== pilot stdout END ====
2025-10-11 18:02:45 (7724): Guest Log: 2025-10-11 16:02:43,948 [wrapper] ==== wrapper stdout RESUME ====
2025-10-11 18:02:45 (7724): Guest Log: 2025-10-11 16:02:43,953 [wrapper] pilotpid: 5953
2025-10-11 18:02:45 (7724): Guest Log: 2025-10-11 16:02:43,958 [wrapper] Pilot exit status: 0
2025-10-11 18:02:45 (7724): Guest Log: 2025-10-11 16:02:44,036 [wrapper] pandaids: 6835801667
2025-10-11 18:02:45 (7724): Guest Log: 2025-10-11 16:02:44,078 [wrapper] cleanup supervisor_pilot 26738 5954
2025-10-11 18:02:45 (7724): Guest Log: 2025-10-11 16:02:44,085 [wrapper] Test setup, not cleaning
2025-10-11 18:02:45 (7724): Guest Log: 2025-10-11 16:02:44,091 [wrapper] apfmon messages muted
2025-10-11 18:02:45 (7724): Guest Log: 2025-10-11 16:02:44,098 [wrapper] ==== wrapper stdout END ====
2025-10-11 18:02:45 (7724): Guest Log: 2025-10-11 16:02:44,105 [wrapper] ==== wrapper stderr END ====
2025-10-11 18:02:45 (7724): Guest Log:  *** Error codes and diagnostics ***
2025-10-11 18:02:45 (7724): Guest Log:     "exeErrorCode": 0,
2025-10-11 18:02:45 (7724): Guest Log:     "exeErrorDiag": "",
2025-10-11 18:02:45 (7724): Guest Log:     "pilotErrorCode": 0,
2025-10-11 18:02:45 (7724): Guest Log:     "pilotErrorDiag": "",
2025-10-11 18:02:45 (7724): Guest Log:  *** Listing of results directory ***
2025-10-11 18:02:45 (7724): Guest Log: total 213812
2025-10-11 18:02:45 (7724): Guest Log: -rw-r--r--. 1 atlas atlas    552446 Oct  8 06:43 pilot3.tar.gz
2025-10-11 18:02:45 (7724): Guest Log: -rwx------. 1 atlas atlas     36292 Oct  8 06:58 runpilot2-wrapper.sh
2025-10-11 18:02:45 (7724): Guest Log: -rw-r--r--. 1 atlas atlas      5112 Oct  8 06:59 queuedata.json
2025-10-11 18:02:45 (7724): Guest Log: -rwxr-xr-x. 1 atlas atlas      8394 Oct 11 04:03 init_data.xml
2025-10-11 18:02:45 (7724): Guest Log: -rwxr-xr-x. 1 atlas atlas    565605 Oct 11 04:03 input.tar.gz
2025-10-11 18:02:45 (7724): Guest Log: -rwxr-xr-x. 1 atlas atlas     15120 Oct 11 04:03 start_atlas.sh
2025-10-11 18:02:45 (7724): Guest Log: lrwxrwxrwx. 1 atlas atlas        20 Oct 11 04:03 EVNT.46676267._000056.pool.root.1 -> /data/./ATLAS.root_0
2025-10-11 18:02:45 (7724): Guest Log: -rw-r--r--. 1 atlas atlas      2547 Oct 11 04:03 pandaJob.out
2025-10-11 18:02:45 (7724): Guest Log: -rw-------. 1 atlas atlas    975509 Oct 11 04:04 agis_schedconf.cvmfs.json
2025-10-11 18:02:45 (7724): Guest Log: drwx------. 4 atlas atlas      4096 Oct 11 04:04 pilot3
2025-10-11 18:02:45 (7724): Guest Log: -rw-------. 1 atlas atlas 202199522 Oct 11 16:01 HITS.46676269._001382.pool.root.1
2025-10-11 18:02:45 (7724): Guest Log: -rw-------. 1 atlas atlas      1026 Oct 11 16:01 memory_monitor_summary.json
2025-10-11 18:02:45 (7724): Guest Log: -rw-------. 1 atlas atlas   1560580 Oct 11 16:01 agis_ddmendpoints.agis.ALL.json
2025-10-11 18:02:45 (7724): Guest Log: -rw-------. 1 atlas atlas    740105 Oct 11 16:01 log.46676269._001382.job.log.tgz.1
2025-10-11 18:02:45 (7724): Guest Log: -rw-------. 1 atlas atlas        95 Oct 11 16:02 pilot_heartbeat.json
2025-10-11 18:02:45 (7724): Guest Log: -rw-------. 1 atlas atlas      7777 Oct 11 16:02 heartbeat.json
2025-10-11 18:02:45 (7724): Guest Log: -rw-------. 1 atlas atlas       930 Oct 11 16:02 pilotlog.txt
2025-10-11 18:02:45 (7724): Guest Log: -rw-------. 1 atlas atlas   5719718 Oct 11 16:02 log.46676269._001382.job.log.1
2025-10-11 18:02:45 (7724): Guest Log: -rw-------. 1 atlas atlas       357 Oct 11 16:02 output.list
2025-10-11 18:02:45 (7724): Guest Log: -rw-r--r--. 1 atlas atlas       620 Oct 11 16:02 runtime_log
2025-10-11 18:02:45 (7724): Guest Log: -rw-------. 1 atlas atlas   6481920 Oct 11 16:02 result.tar.gz
2025-10-11 18:02:45 (7724): Guest Log: -rw-r--r--. 1 atlas atlas      8645 Oct 11 16:02 runtime_log.err
2025-10-11 18:02:45 (7724): Guest Log: -rw-------. 1 atlas atlas       664 Oct 11 16:02 oujMDmVJdQ8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmDXXNDmuBzxOn.diag
2025-10-11 18:02:45 (7724): Guest Log: Looking for outputfile HITS.46676269._001382.pool.root.1
2025-10-11 18:02:45 (7724): Guest Log: HITS file was successfully produced
2025-10-11 18:02:45 (7724): Guest Log: -rw-------. 1 atlas atlas 202199522 Oct 11 16:01 /home/atlas/RunAtlas/HITS.46676269._001382.pool.root.1
2025-10-11 18:02:46 (7724): Guest Log: Successfully finished the ATLAS job!
2025-10-11 18:02:46 (7724): Guest Log: Copying the results back to the shared directory!
2025-10-11 18:02:46 (7724): Guest Log:  *** Contents of shared directory: ***
2025-10-11 18:02:46 (7724): Guest Log: total 420652
2025-10-11 18:02:46 (7724): Guest Log: -rwxrwxrwx. 1 root root 221461209 Oct 11 04:01 ATLAS.root_0
2025-10-11 18:02:46 (7724): Guest Log: -rwxrwxrwx. 1 root root 202199522 Oct 11 16:02 HITS.pool.root.1
2025-10-11 18:02:46 (7724): Guest Log: -rwxrwxrwx. 1 root root      8394 Oct 11 04:01 init_data.xml
2025-10-11 18:02:46 (7724): Guest Log: -rwxrwxrwx. 1 root root    565605 Oct  8 07:13 input.tar.gz
2025-10-11 18:02:46 (7724): Guest Log: -rwxrwxrwx. 1 root root   6481920 Oct 11 16:02 result.tar.gz
2025-10-11 18:02:46 (7724): Guest Log: -rwxrwxrwx. 1 root root     15120 Oct  8 07:13 start_atlas.sh
2025-10-11 18:02:46 (7724): Guest Log:  *** Success! Shutting down the machine. ***
2025-10-11 18:02:46 (7724): VM Completion File Detected.
2025-10-11 18:02:46 (7724): Powering off VM.
2025-10-11 18:02:47 (7724): Successfully stopped VM.
2025-10-11 18:02:47 (7724): Deregistering VM. (boinc_e642b340b745e24b, slot#0)
2025-10-11 18:02:47 (7724): Removing network bandwidth throttle group from VM.
2025-10-11 18:02:47 (7724): Removing VM from VirtualBox.
2025-10-11 18:02:52 (7724): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN