Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
09:13:35 (411893): wrapper (7.7.26015): starting
09:13:35 (411893): wrapper: running run_atlas (--nthreads 4)
[2025-10-08 09:13:35] Arguments: --nthreads 4
[2025-10-08 09:13:35] Threads: 4
[2025-10-08 09:13:35] Checking for CVMFS
[2025-10-08 09:13:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 09:13:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 09:13:35] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 09:13:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 09:13:35] 2.13.2.0 326601 88 46784 151464 3 16 3381100 4194305 1010 130560 18 231921 96.136 901592 840 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-08 09:13:35] CVMFS is ok
[2025-10-08 09:13:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-08 09:13:35] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-08 09:13:35] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-08 09:13:35] Further information can be found at the LHC@home message board.
[2025-10-08 09:13:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 09:13:35] Checking for apptainer binary...
[2025-10-08 09:13:35] apptainer is not installed, using version from CVMFS
[2025-10-08 09:13:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 09:13:36] Ryze
[2025-10-08 09:13:36] apptainer works
[2025-10-08 09:13:36] Set ATHENA_PROC_NUMBER=4
[2025-10-08 09:13:36] Set ATHENA_CORE_NUMBER=4
[2025-10-08 09:13:36] Starting ATLAS job with PandaID=6835801738
[2025-10-08 09:13:36] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-08 09:20:00]  *** The last 200 lines of the pilot log: ***
[2025-10-08 09:20:00] 2025-10-08 07:19:28,393 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-08 09:20:00] 2025-10-08 07:19:28,393 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-08 09:20:00] 2025-10-08 07:19:28,393 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-08 09:20:00] 2025-10-08 07:19:28,394 | WARNING  | wrong length of table data, x=[1759907642.0, 1759907703.0, 1759907764.0, 1759907825.0], y=[1481.0, 1003588.0, 1904907.0, 1947876.0] (must be same and length>=4)
[2025-10-08 09:20:00] 2025-10-08 07:19:28,394 | INFO     | could have reported an average CPU frequency of 3649 MHz (4 samples)
[2025-10-08 09:20:00] 2025-10-08 07:19:28,394 | INFO     | ..............................
[2025-10-08 09:20:00] 2025-10-08 07:19:28,394 | INFO     | . Timing measurements:
[2025-10-08 09:20:00] 2025-10-08 07:19:28,394 | INFO     | . get job = 0 s
[2025-10-08 09:20:00] 2025-10-08 07:19:28,394 | INFO     | . initial setup = 1 s
[2025-10-08 09:20:00] 2025-10-08 07:19:28,394 | INFO     | . payload setup = 3 s
[2025-10-08 09:20:00] 2025-10-08 07:19:28,394 | INFO     | . stage-in = 0 s
[2025-10-08 09:20:00] 2025-10-08 07:19:28,394 | INFO     | . payload execution = 207 s
[2025-10-08 09:20:00] 2025-10-08 07:19:28,394 | INFO     | . stage-out = 0 s
[2025-10-08 09:20:00] 2025-10-08 07:19:28,394 | INFO     | . log creation = 0 s
[2025-10-08 09:20:00] 2025-10-08 07:19:28,394 | INFO     | ..............................
[2025-10-08 09:20:00] 2025-10-08 07:19:28,394 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-08 09:20:00] 2025-10-08 07:19:28,394 | INFO     | executing command: tail -n 20 /var/lib/boinc-client/slots/3/PanDA_Pilot-6835801738/pilotlog.txt
[2025-10-08 09:20:00] 2025-10-08 07:19:28,411 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-10-08 09:20:00] - Log from pilotlog.txt -
[2025-10-08 09:20:00] 2025-10-08 07:19:28,393 | INFO     | using path: /var/lib/boinc-client/slots/3/PanDA_Pilot-6835801738/memory_monitor_summary.json (trf name=prmon)
[2025-10-08 09:20:00] 2025-10-08 07:19:28,393 | INFO     | extracted standard info from prmon json
[2025-10-08 09:20:00] 2025-10-08 07:19:28,393 | INFO     | extracted standard memory fields from prmon json
[2025-10-08 09:20:00] 2025-10-08 07:19:28,393 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-08 09:20:00] 2025-10-08 07:19:28,393 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-08 09:20:00] 2025-10-08 07:19:28,393 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-08 09:20:00] 2025-10-08 07:19:28,394 | WARNING  | wrong length of table data, x=[1759907642.0, 1759907703.0, 1759907764.0, 1759907825.0], y=[1481.0, 1003588.0, 1904907.0, 1947876.0] (must be same and length>=4)
[2025-10-08 09:20:00] 2025-10-08 07:19:28,394 | INFO     | could have reported an average CPU frequency of 3649 MHz (4 samples)
[2025-10-08 09:20:00] 2025-10-08 07:19:28,394 | INFO     | ..............................
[2025-10-08 09:20:00] 2025-10-08 07:19:28,394 | INFO     | . Timing measurements:
[2025-10-08 09:20:00] 2025-10-08 07:19:28,394 | INFO     | . get job = 0 s
[2025-10-08 09:20:00] 2025-10-08 07:19:28,394 | INFO     | . initial setup = 1 s
[2025-10-08 09:20:00] 2025-10-08 07:19:28,394 | INFO     | . payload setup = 3 s
[2025-10-08 09:20:00] 2025-10-08 07:19:28,394 | INFO     | . stage-in = 0 s
[2025-10-08 09:20:00] 2025-10-08 07:19:28,394 | INFO     | . payload execution = 207 s
[2025-10-08 09:20:00] 2025-10-08 07:19:28,394 | INFO     | . stage-out = 0 s
[2025-10-08 09:20:00] 2025-10-08 07:19:28,394 | INFO     | . log creation = 0 s
[2025-10-08 09:20:00] 2025-10-08 07:19:28,394 | INFO     | ..............................
[2025-10-08 09:20:00] 2025-10-08 07:19:28,394 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-08 09:20:00] 2025-10-08 07:19:28,394 | INFO     | executing command: tail -n 20 /var/lib/boinc-client/slots/3/PanDA_Pilot-6835801738/pilotlog.txt
[2025-10-08 09:20:00] 2025-10-08 07:19:28,411 | WARNING  | 
[2025-10-08 09:20:00] [begin log extracts]
[2025-10-08 09:20:00] - Log from pilotlog.txt -
[2025-10-08 09:20:00] 2025-10-08 07:19:28,393 | INFO     | using path: /var/lib/boinc-client/slots/3/PanDA_Pilot-6835801738/memory_monitor_summary.json (trf name=prmon)
[2025-10-08 09:20:00] 2025-10-08 07:19:28,393 | INFO     | extracted standard info from prmon json
[2025-10-08 09:20:00] 2025-10-08 07:19:28,393 | INFO     | extracted standard memory fields from prmon json
[2025-10-08 09:20:00] 2025-10-08 07:19:28,393 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-08 09:20:00] 2025-10-08 07:19:28,393 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-08 09:20:00] 2025-10-08 07:19:28,393 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-08 09:20:00] 2025-10-08 07:19:28,394 | WARNING  | wrong length of table data, x=[1759907642.0, 1759907703.0, 1759907764.0, 1759907825.0], y=[1481.0, 1003588.0, 1904907.0, 1947876.0] (must be same and length>=4)
[2025-10-08 09:20:00] 2025-10-08 07:19:28,394 | INFO     | could have reported an average CPU frequency of 3649 MHz (4 samples)
[2025-10-08 09:20:00] 2025-10-08 07:19:28,394 | INFO     | ..............................
[2025-10-08 09:20:00] 2025-10-08 07:19:28,394 | INFO     | . Timing measurements:
[2025-10-08 09:20:00] 2025-10-08 07:19:28,394 | INFO     | . get job = 0 s
[2025-10-08 09:20:00] 2025-10-08 07:19:28,394 | INFO     | . initial setup = 1 s
[2025-10-08 09:20:00] 2025-10-08 07:19:28,394 | INFO     | . payload setup = 3 s
[2025-10-08 09:20:00] 2025-10-08 07:19:28,394 | INFO     | . stage-in = 0 s
[2025-10-08 09:20:00] 2025-10-08 07:19:28,394 | INFO     | . payload execution = 207 s
[2025-10-08 09:20:00] 2025-10-08 07:19:28,394 | INFO     | . stage-out = 0 s
[2025-10-08 09:20:00] 2025-10-08 07:19:28,394 | INFO     | . log creation = 0 s
[2025-10-08 09:20:00] 2025-10-08 07:19:28,394 | INFO     | ..............................
[2025-10-08 09:20:00] 2025-10-08 07:19:28,394 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-10-08 09:20:00] 2025-10-08 07:19:28,394 | INFO     | executing command: tail -n 20 /var/lib/boinc-client/slots/3/PanDA_Pilot-6835801738/pilotlog.txt
[2025-10-08 09:20:00] [end log extracts]
[2025-10-08 09:20:00] 2025-10-08 07:19:28,411 | WARNING  | pilotErrorCodes = [1305] (will report primary/first error code)
[2025-10-08 09:20:00] 2025-10-08 07:19:28,412 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a 
[2025-10-08 09:20:00] 2025-10-08 07:19:28,467 | INFO     | 
[2025-10-08 09:20:00] 2025-10-08 07:19:28,467 | INFO     | job summary report
[2025-10-08 09:20:00] 2025-10-08 07:19:28,467 | INFO     | --------------------------------------------------
[2025-10-08 09:20:00] 2025-10-08 07:19:28,468 | INFO     | PanDA job id: 6835801738
[2025-10-08 09:20:00] 2025-10-08 07:19:28,468 | INFO     | task id: 46676269
[2025-10-08 09:20:00] 2025-10-08 07:19:28,468 | INFO     | error 1/1: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-10-08 09:17:21,804 CRITICAL Transform executor raised TransformValidationExceptio
[2025-10-08 09:20:00] 2025-10-08 07:19:28,468 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-08 09:20:00] 2025-10-08 07:19:28,468 | INFO     | pilot state: failed 
[2025-10-08 09:20:00] 2025-10-08 07:19:28,468 | INFO     | transexitcode: 65
[2025-10-08 09:20:00] 2025-10-08 07:19:28,468 | INFO     | exeerrorcode: 65
[2025-10-08 09:20:00] 2025-10-08 07:19:28,468 | INFO     | exeerrordiag: EVNTtoHITS got a SIGTRAP signal (exit code 133); G4 exception at line 1695 (see jobReport for further details)
[2025-10-08 09:20:00] 2025-10-08 07:19:28,468 | INFO     | exitcode: 65
[2025-10-08 09:20:00] 2025-10-08 07:19:28,468 | INFO     | exitmsg: EVNTtoHITS got a SIGTRAP signal (exit code 133); G4 exception at line 1695 (see jobReport for further details)
[2025-10-08 09:20:00] 2025-10-08 07:19:28,468 | INFO     | cpuconsumptiontime: 66 s
[2025-10-08 09:20:00] 2025-10-08 07:19:28,468 | INFO     | nevents: 0
[2025-10-08 09:20:00] 2025-10-08 07:19:28,468 | INFO     | neventsw: 0
[2025-10-08 09:20:00] 2025-10-08 07:19:28,468 | INFO     | pid: 422270
[2025-10-08 09:20:00] 2025-10-08 07:19:28,468 | INFO     | pgrp: 422270
[2025-10-08 09:20:00] 2025-10-08 07:19:28,468 | INFO     | corecount: 4
[2025-10-08 09:20:00] 2025-10-08 07:19:28,468 | INFO     | event service: False
[2025-10-08 09:20:00] 2025-10-08 07:19:28,468 | INFO     | sizes: {0: 2348855, 2: 2349117, 11: 2349145, 213: 2374518, 214: 2378848, 333: 2378986}
[2025-10-08 09:20:00] 2025-10-08 07:19:28,468 | INFO     | --------------------------------------------------
[2025-10-08 09:20:00] 2025-10-08 07:19:28,468 | INFO     | 
[2025-10-08 09:20:00] 2025-10-08 07:19:28,468 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/3
[2025-10-08 09:20:00] 2025-10-08 07:19:28,487 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-08 09:20:00] 2025-10-08 07:19:28,487 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-08 09:20:00] 2025-10-08 07:19:28,487 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-08 09:20:00] 2025-10-08 07:19:28,487 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-08 09:20:00] 2025-10-08 07:19:28,487 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-08 09:20:00] 2025-10-08 07:19:28,487 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-08 09:20:00] 2025-10-08 07:19:28,487 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-08 09:20:00] 2025-10-08 07:19:28,487 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-08 09:20:00] 2025-10-08 07:19:28,487 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-08 09:20:00] 2025-10-08 07:19:28,487 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-08 09:20:00] 2025-10-08 07:19:28,487 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-08 09:20:00] 2025-10-08 07:19:28,487 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-08 09:20:00] 2025-10-08 07:19:28,487 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-08 09:20:00] 2025-10-08 07:19:28,488 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-08 09:20:00] 2025-10-08 07:19:28,488 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-08 09:20:00] 2025-10-08 07:19:28,488 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-08 09:20:00] 2025-10-08 07:19:28,488 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-08 09:20:00] 2025-10-08 07:19:28,488 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-08 09:20:00] 2025-10-08 07:19:28,488 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-08 09:20:00] 2025-10-08 07:19:28,488 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-08 09:20:00] 2025-10-08 07:19:28,488 | INFO     | job 6835801738 has completed (purged errors)
[2025-10-08 09:20:00] 2025-10-08 07:19:28,488 | INFO     | overall cleanup function is called
[2025-10-08 09:20:00] 2025-10-08 07:19:29,495 | INFO     | --- collectZombieJob: --- 10, [422270]
[2025-10-08 09:20:00] 2025-10-08 07:19:29,495 | INFO     | zombie collector waiting for pid 422270
[2025-10-08 09:20:00] 2025-10-08 07:19:29,495 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-08 09:20:00] 2025-10-08 07:19:29,495 | INFO     | collected zombie processes
[2025-10-08 09:20:00] 2025-10-08 07:19:29,495 | INFO     | will attempt to kill all subprocesses of pid=422270
[2025-10-08 09:20:00] 2025-10-08 07:19:29,568 | INFO     | process IDs to be killed: [422270] (in reverse order)
[2025-10-08 09:20:00] 2025-10-08 07:19:29,609 | WARNING  | found no corresponding commands to process id(s)
[2025-10-08 09:20:00] 2025-10-08 07:19:29,609 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-08 09:20:00] 2025-10-08 07:19:29,613 | INFO     | did not find any defunct processes belonging to 422270
[2025-10-08 09:20:00] 2025-10-08 07:19:29,615 | INFO     | did not find any defunct processes belonging to 422270
[2025-10-08 09:20:00] 2025-10-08 07:19:29,615 | INFO     | ready for new job
[2025-10-08 09:20:00] 2025-10-08 07:19:29,615 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-08 09:20:00] 2025-10-08 07:19:29,615 | INFO     | ***************************************
[2025-10-08 09:20:00] 2025-10-08 07:19:29,616 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-08 09:20:00] 2025-10-08 07:19:29,616 | INFO     | ***************************************
[2025-10-08 09:20:00] 2025-10-08 07:19:29,616 | INFO     | 
[2025-10-08 09:20:00] 2025-10-08 07:19:29,616 | INFO     | architecture information:
[2025-10-08 09:20:00] 2025-10-08 07:19:29,617 | INFO     | executing command: cat /etc/os-release
[2025-10-08 09:20:00] 2025-10-08 07:19:29,627 | INFO     | cat /etc/os-release:
[2025-10-08 09:20:00] NAME="CentOS Linux"
[2025-10-08 09:20:00] VERSION="7 (Core)"
[2025-10-08 09:20:00] ID="centos"
[2025-10-08 09:20:00] ID_LIKE="rhel fedora"
[2025-10-08 09:20:00] VERSION_ID="7"
[2025-10-08 09:20:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-08 09:20:00] ANSI_COLOR="0;31"
[2025-10-08 09:20:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-08 09:20:00] HOME_URL="https://www.centos.org/"
[2025-10-08 09:20:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-08 09:20:00] 
[2025-10-08 09:20:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-08 09:20:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-08 09:20:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-08 09:20:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-08 09:20:00] 
[2025-10-08 09:20:00] 2025-10-08 07:19:29,627 | INFO     | ***************************************
[2025-10-08 09:20:00] 2025-10-08 07:19:30,130 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/3
[2025-10-08 09:20:00] 2025-10-08 07:19:30,145 | INFO     | sufficient remaining disk space (3171253485568 B)
[2025-10-08 09:20:00] 2025-10-08 07:19:30,145 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-08 09:20:00] 2025-10-08 07:19:30,145 | INFO     | current server update state: UPDATING_FINAL
[2025-10-08 09:20:00] 2025-10-08 07:19:30,145 | INFO     | update_server=False
[2025-10-08 09:20:00] 2025-10-08 07:19:30,145 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-08 09:20:00] 2025-10-08 07:19:30,146 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-08 09:20:00] 2025-10-08 07:19:30,146 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-08 09:20:00] 2025-10-08 07:19:30,621 | INFO     | all data control threads have been joined
[2025-10-08 09:20:00] 2025-10-08 07:19:30,803 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-08 09:20:00] 2025-10-08 07:19:30,803 | INFO     | aborting loop
[2025-10-08 09:20:00] 2025-10-08 07:19:30,980 | INFO     | all payload control threads have been joined
[2025-10-08 09:20:00] 2025-10-08 07:19:31,151 | INFO     | [job] retrieve thread has finished
[2025-10-08 09:20:00] 2025-10-08 07:19:31,151 | INFO     | [job] queue monitor thread has finished
[2025-10-08 09:20:00] 2025-10-08 07:19:31,430 | INFO     | [data] copytool_in thread has finished
[2025-10-08 09:20:00] 2025-10-08 07:19:31,535 | INFO     | all job control threads have been joined
[2025-10-08 09:20:00] 2025-10-08 07:19:31,626 | INFO     | [data] control thread has finished
[2025-10-08 09:20:00] 2025-10-08 07:19:31,765 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-08 09:20:00] 2025-10-08 07:19:31,808 | INFO     | [job] job monitor thread has finished
[2025-10-08 09:20:00] 2025-10-08 07:19:31,857 | INFO     | [payload] execute_payloads thread has finished
[2025-10-08 09:20:00] 2025-10-08 07:19:31,966 | INFO     | [job] validate thread has finished
[2025-10-08 09:20:00] 2025-10-08 07:19:31,986 | INFO     | [payload] control thread has finished
[2025-10-08 09:20:00] 2025-10-08 07:19:32,009 | INFO     | [payload] failed_post thread has finished
[2025-10-08 09:20:00] 2025-10-08 07:19:32,097 | INFO     | [job] create_data_payload thread has finished
[2025-10-08 09:20:00] 2025-10-08 07:19:32,151 | INFO     | [data] copytool_out thread has finished
[2025-10-08 09:20:00] 2025-10-08 07:19:32,175 | INFO     | [payload] validate_pre thread has finished
[2025-10-08 09:20:00] 2025-10-08 07:19:32,207 | INFO     | [payload] validate_post thread has finished
[2025-10-08 09:20:00] 2025-10-08 07:19:32,534 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-08 09:20:00] 2025-10-08 07:19:32,540 | INFO     | [job] control thread has finished
[2025-10-08 09:20:00] 2025-10-08 07:19:36,540 | INFO     | [data] queue_monitor thread has finished
[2025-10-08 09:20:00] 2025-10-08 07:19:42,142 | INFO     | [monitor] cgroup control has ended
[2025-10-08 09:20:00] 2025-10-08 07:19:43,147 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129636285896512)>', '<ExcThread(monitor, started 129635383760640)>']
[2025-10-08 09:20:00] 2025-10-08 07:19:48,172 | INFO     | all workflow threads have been joined
[2025-10-08 09:20:00] 2025-10-08 07:19:48,172 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-08 09:20:00] 2025-10-08 07:19:48,172 | INFO     | traces error code: 0
[2025-10-08 09:20:00] 2025-10-08 07:19:48,172 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-08 09:20:00] 2025-10-08 07:20:00,096 | INFO     | PID=415695 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-08 09:20:00] 2025-10-08 07:20:00,097 | INFO     | .. there are 3 such processes running
[2025-10-08 09:20:00] 2025-10-08 07:20:00,097 | INFO     | found 0 job(s) in 20 queues
[2025-10-08 09:20:00] 2025-10-08 07:20:00,097 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-08 09:20:00] 2025-10-08 07:20:00,097 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-08 09:20:00] 2025-10-08 07:20:00,097 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-08 09:20:00] 2025-10-08 07:20:00,097 | INFO     | [monitor] control thread has ended
[2025-10-08 09:20:00] 2025-10-08 07:20:00,205 [wrapper] ==== pilot stdout END ====
[2025-10-08 09:20:00] 2025-10-08 07:20:00,207 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-08 09:20:00] 2025-10-08 07:20:00,208 [wrapper] pilotpid: 415695
[2025-10-08 09:20:00] 2025-10-08 07:20:00,210 [wrapper] Pilot exit status: 0
[2025-10-08 09:20:00] 2025-10-08 07:20:00,216 [wrapper] pandaids: 6835801738
[2025-10-08 09:20:00] 2025-10-08 07:20:00,236 [wrapper] cleanup supervisor_pilot  415701 415696
[2025-10-08 09:20:00] 2025-10-08 07:20:00,238 [wrapper] Test setup, not cleaning
[2025-10-08 09:20:00] 2025-10-08 07:20:00,240 [wrapper] apfmon messages muted
[2025-10-08 09:20:00] 2025-10-08 07:20:00,242 [wrapper] ==== wrapper stdout END ====
[2025-10-08 09:20:00] 2025-10-08 07:20:00,243 [wrapper] ==== wrapper stderr END ====
[2025-10-08 09:20:00]  *** Error codes and diagnostics ***
[2025-10-08 09:20:00]     "exeErrorCode": 65,
[2025-10-08 09:20:00]     "exeErrorDiag": "EVNTtoHITS got a SIGTRAP signal (exit code 133); G4 exception at line 1695 (see jobReport for further details)",
[2025-10-08 09:20:00]     "pilotErrorCode": 1305,
[2025-10-08 09:20:00]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGTRAP signal (exit code 133); G4 exception at line 1695 (see jobReport for further details)",
[2025-10-08 09:20:00]  *** Listing of results directory ***
[2025-10-08 09:20:00] insgesamt 217676
[2025-10-08 09:20:00] -rw-r--r-- 1 boinc boinc    552446 Okt  8 08:43 pilot3.tar.gz
[2025-10-08 09:20:00] -rwx------ 1 boinc boinc     36292 Okt  8 08:58 runpilot2-wrapper.sh
[2025-10-08 09:20:00] -rw-r--r-- 1 boinc boinc      5112 Okt  8 08:59 queuedata.json
[2025-10-08 09:20:00] -rw-r--r-- 1 boinc boinc       100 Okt  8 09:13 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-08 09:20:00] -rwxr-xr-x 1 boinc boinc      7986 Okt  8 09:13 run_atlas
[2025-10-08 09:20:00] -rw-r--r-- 1 boinc boinc       105 Okt  8 09:13 job.xml
[2025-10-08 09:20:00] -rw-r--r-- 2 boinc boinc 218664693 Okt  8 09:13 EVNT.46676267._000059.pool.root.1
[2025-10-08 09:20:00] drwxrwx--x 2 boinc boinc      4096 Okt  8 09:13 shared
[2025-10-08 09:20:00] -rw-r--r-- 2 boinc boinc    565604 Okt  8 09:13 input.tar.gz
[2025-10-08 09:20:00] -rw-r--r-- 2 boinc boinc     15120 Okt  8 09:13 start_atlas.sh
[2025-10-08 09:20:00] -rw-r--r-- 1 boinc boinc         0 Okt  8 09:13 boinc_setup_complete
[2025-10-08 09:20:00] -rw-r--r-- 1 boinc boinc      8874 Okt  8 09:13 init_data.xml
[2025-10-08 09:20:00] -rw-r--r-- 1 boinc boinc         0 Okt  8 09:13 boinc_lockfile
[2025-10-08 09:20:00] -rw-r--r-- 1 boinc boinc      2546 Okt  8 09:13 pandaJob.out
[2025-10-08 09:20:00] -rw------- 1 boinc boinc    979849 Okt  8 09:13 agis_schedconf.cvmfs.json
[2025-10-08 09:20:00] -rw------- 1 boinc boinc   1560401 Okt  8 09:13 agis_ddmendpoints.agis.ALL.json
[2025-10-08 09:20:00] drwx------ 4 boinc boinc      4096 Okt  8 09:13 pilot3
[2025-10-08 09:20:00] -rw-r--r-- 1 boinc boinc       525 Okt  8 09:17 boinc_task_state.xml
[2025-10-08 09:20:00] -rw------- 1 boinc boinc      1012 Okt  8 09:17 memory_monitor_summary.json
[2025-10-08 09:20:00] -rw------- 1 boinc boinc     64433 Okt  8 09:17 log.46676269._001453.job.log.tgz.1
[2025-10-08 09:20:00] -rw------- 1 boinc boinc      9523 Okt  8 09:19 heartbeat.json
[2025-10-08 09:20:00] -rw-r--r-- 1 boinc boinc        23 Okt  8 09:19 wrapper_checkpoint.txt
[2025-10-08 09:20:00] -rw-r--r-- 1 boinc boinc      8192 Okt  8 09:19 boinc_mmap_file
[2025-10-08 09:20:00] -rw------- 1 boinc boinc       821 Okt  8 09:20 pilotlog.txt
[2025-10-08 09:20:00] -rw------- 1 boinc boinc        95 Okt  8 09:20 pilot_heartbeat.json
[2025-10-08 09:20:00] -rw------- 1 boinc boinc    106927 Okt  8 09:20 log.46676269._001453.job.log.1
[2025-10-08 09:20:00] -rw------- 1 boinc boinc       188 Okt  8 09:20 output.list
[2025-10-08 09:20:00] -rw-r--r-- 1 boinc boinc       620 Okt  8 09:20 runtime_log
[2025-10-08 09:20:00] -rw------- 1 boinc boinc    194560 Okt  8 09:20 result.tar.gz
[2025-10-08 09:20:00] -rw-r--r-- 1 boinc boinc      8578 Okt  8 09:20 runtime_log.err
[2025-10-08 09:20:00] -rw------- 1 boinc boinc       627 Okt  8 09:20 Kl5LDmcJdQ8n9Rq4apOajLDm4fhM0noT9bVof3QYDmm0LMDmT6C5rn.diag
[2025-10-08 09:20:00] -rw-r--r-- 1 boinc boinc     22395 Okt  8 09:20 stderr.txt
[2025-10-08 09:20:00] No HITS result produced
[2025-10-08 09:20:00]  *** Contents of shared directory: ***
[2025-10-08 09:20:00] insgesamt 214304
[2025-10-08 09:20:00] -rw-r--r-- 2 boinc boinc 218664693 Okt  8 09:13 ATLAS.root_0
[2025-10-08 09:20:00] -rw-r--r-- 2 boinc boinc    565604 Okt  8 09:13 input.tar.gz
[2025-10-08 09:20:00] -rw-r--r-- 2 boinc boinc     15120 Okt  8 09:13 start_atlas.sh
[2025-10-08 09:20:00] -rw------- 1 boinc boinc    194560 Okt  8 09:20 result.tar.gz
09:20:02 (411893): run_atlas exited; CPU time 63.100151
09:20:02 (411893): called boinc_finish(0)

</stderr_txt>
]]>

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