Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:12:02 (26730): wrapper (7.7.26015): starting
08:12:02 (26730): wrapper: running run_atlas (--nthreads 8)
[2025-10-08 08:12:02] Arguments: --nthreads 8
[2025-10-08 08:12:02] Threads: 8
[2025-10-08 08:12:02] Checking for CVMFS
[2025-10-08 08:12:02] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 08:12:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 08:12:04] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 08:12:06] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 08:12:06] 2.11.2.0 14372 214260 135456 151460 1 162 14475169 25165824 4259 130560 0 117073301 99.886 66494254 3335 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-08 08:12:06] CVMFS is ok
[2025-10-08 08:12:06] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 08:12:06] Checking for apptainer binary...
[2025-10-08 08:12:06] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 08:12:06] Running /usr/bin/apptainer --version
[2025-10-08 08:12:06] apptainer version 1.3.2-1.el7
[2025-10-08 08:12:06] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 08:12:09] cg-vwn440.simple-grid.lan
[2025-10-08 08:12:09] apptainer works
[2025-10-08 08:12:09] Set ATHENA_PROC_NUMBER=8
[2025-10-08 08:12:09] Set ATHENA_CORE_NUMBER=8
[2025-10-08 08:12:09] Starting ATLAS job with PandaID=6830323795
[2025-10-08 08:12:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/31 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-08 11:50:25]  *** The last 200 lines of the pilot log: ***
[2025-10-08 11:50:25] 2025-10-08 09:49:27,026 | INFO     | fitting pss+swap vs Time
[2025-10-08 11:50:25] 2025-10-08 09:49:27,027 | INFO     | sum of square deviations: 2871616632.5
[2025-10-08 11:50:25] 2025-10-08 09:49:27,030 | INFO     | sum of deviations: -27671655730.50001
[2025-10-08 11:50:25] 2025-10-08 09:49:27,030 | INFO     | mean x: 1759910432.5
[2025-10-08 11:50:25] 2025-10-08 09:49:27,030 | INFO     | mean y: 2516631.280952381
[2025-10-08 11:50:25] 2025-10-08 09:49:27,031 | INFO     | -- intersect: 16961478023.790361
[2025-10-08 11:50:25] 2025-10-08 09:49:27,031 | INFO     | intersect: 16961478023.790361
[2025-10-08 11:50:25] 2025-10-08 09:49:27,031 | INFO     | chi2: 2.5971894636948005
[2025-10-08 11:50:25] 2025-10-08 09:49:27,031 | INFO     | sum of square deviations: 2671343110.0
[2025-10-08 11:50:25] 2025-10-08 09:49:27,033 | INFO     | sum of deviations: -12847406724.999996
[2025-10-08 11:50:25] 2025-10-08 09:49:27,033 | INFO     | mean x: 1759910280.0
[2025-10-08 11:50:25] 2025-10-08 09:49:27,033 | INFO     | mean y: 2527715.6780487807
[2025-10-08 11:50:25] 2025-10-08 09:49:27,033 | INFO     | -- intersect: 8466540849.007308
[2025-10-08 11:50:25] 2025-10-08 09:49:27,034 | INFO     | intersect: 8466540849.007308
[2025-10-08 11:50:25] 2025-10-08 09:49:27,034 | INFO     | chi2: 1.8320551277006112
[2025-10-08 11:50:25] 2025-10-08 09:49:27,034 | INFO     | current chi2=1.8320551277006112 (change=29.460089326933346 %)
[2025-10-08 11:50:25] 2025-10-08 09:49:27,035 | INFO     | sum of square deviations: 2480604650.0
[2025-10-08 11:50:25] 2025-10-08 09:49:27,036 | INFO     | sum of deviations: -12137389203.499998
[2025-10-08 11:50:25] 2025-10-08 09:49:27,036 | INFO     | mean x: 1759910127.5
[2025-10-08 11:50:25] 2025-10-08 09:49:27,036 | INFO     | mean y: 2528283.495
[2025-10-08 11:50:25] 2025-10-08 09:49:27,037 | INFO     | -- intersect: 8613620010.928795
[2025-10-08 11:50:25] 2025-10-08 09:49:27,037 | INFO     | intersect: 8613620010.928795
[2025-10-08 11:50:25] 2025-10-08 09:49:27,037 | INFO     | chi2: 1.8315692605833864
[2025-10-08 11:50:25] 2025-10-08 09:49:27,037 | INFO     | current chi2=1.8315692605833864 (change=0.026520332815233798 %)
[2025-10-08 11:50:25] 2025-10-08 09:49:27,037 | INFO     | right removable region: 199
[2025-10-08 11:50:25] 2025-10-08 09:49:27,038 | INFO     | sum of square deviations: 2671343110.0
[2025-10-08 11:50:25] 2025-10-08 09:49:27,039 | INFO     | sum of deviations: -61570581129.0
[2025-10-08 11:50:25] 2025-10-08 09:49:27,039 | INFO     | mean x: 1759910585.0
[2025-10-08 11:50:25] 2025-10-08 09:49:27,039 | INFO     | mean y: 2542178.5219512195
[2025-10-08 11:50:25] 2025-10-08 09:49:27,039 | INFO     | -- intersect: 40565926585.37501
[2025-10-08 11:50:25] 2025-10-08 09:49:27,039 | INFO     | intersect: 40565926585.37501
[2025-10-08 11:50:25] 2025-10-08 09:49:27,040 | INFO     | chi2: 1.0236725667975597
[2025-10-08 11:50:25] 2025-10-08 09:49:27,040 | INFO     | current chi2=1.0236725667975597 (change=60.58537195275435 %)
[2025-10-08 11:50:25] 2025-10-08 09:49:27,040 | INFO     | sum of square deviations: 2480604650.0
[2025-10-08 11:50:25] 2025-10-08 09:49:27,042 | INFO     | sum of deviations: -63719985546.99997
[2025-10-08 11:50:25] 2025-10-08 09:49:27,042 | INFO     | mean x: 1759910737.5
[2025-10-08 11:50:25] 2025-10-08 09:49:27,042 | INFO     | mean y: 2543869.8
[2025-10-08 11:50:25] 2025-10-08 09:49:27,042 | INFO     | -- intersect: 45209863285.85853
[2025-10-08 11:50:25] 2025-10-08 09:49:27,042 | INFO     | intersect: 45209863285.85853
[2025-10-08 11:50:25] 2025-10-08 09:49:27,043 | INFO     | chi2: 0.9881520822655607
[2025-10-08 11:50:25] 2025-10-08 09:49:27,043 | INFO     | current chi2=0.9881520822655607 (change=3.469906851476997 %)
[2025-10-08 11:50:25] 2025-10-08 09:49:27,043 | INFO     | left removable region: 20
[2025-10-08 11:50:25] 2025-10-08 09:49:27,043 | INFO     | sum of square deviations: 1778377530.0
[2025-10-08 11:50:25] 2025-10-08 09:49:27,044 | INFO     | sum of deviations: -36684460600.0
[2025-10-08 11:50:25] 2025-10-08 09:49:27,044 | INFO     | mean x: 1759910707.0
[2025-10-08 11:50:25] 2025-10-08 09:49:27,045 | INFO     | mean y: 2547892.2067039106
[2025-10-08 11:50:25] 2025-10-08 09:49:27,045 | INFO     | -- intersect: 36306073944.101685
[2025-10-08 11:50:25] 2025-10-08 09:49:27,045 | INFO     | intersect: 36306073944.101685
[2025-10-08 11:50:25] 2025-10-08 09:49:27,045 | INFO     | chi2: 0.18398409121755008
[2025-10-08 11:50:25] 2025-10-08 09:49:27,045 | INFO     | -- intersect: 36306073944.101685
[2025-10-08 11:50:25] 2025-10-08 09:49:27,046 | INFO     | current memory leak: -20.63 B/s (using 179 data points, chi2=0.18)
[2025-10-08 11:50:25] 2025-10-08 09:49:27,046 | INFO     | could have reported an average CPU frequency of 1999 MHz (10 samples)
[2025-10-08 11:50:25] 2025-10-08 09:49:27,047 | INFO     | ..............................
[2025-10-08 11:50:25] 2025-10-08 09:49:27,047 | INFO     | . Timing measurements:
[2025-10-08 11:50:25] 2025-10-08 09:49:27,047 | INFO     | . get job = 0 s
[2025-10-08 11:50:25] 2025-10-08 09:49:27,047 | INFO     | . initial setup = 2 s
[2025-10-08 11:50:25] 2025-10-08 09:49:27,047 | INFO     | . payload setup = 24 s
[2025-10-08 11:50:25] 2025-10-08 09:49:27,047 | INFO     | . stage-in = 0 s
[2025-10-08 11:50:25] 2025-10-08 09:49:27,047 | INFO     | . payload execution = 12834 s
[2025-10-08 11:50:25] 2025-10-08 09:49:27,047 | INFO     | . stage-out = 3 s
[2025-10-08 11:50:25] 2025-10-08 09:49:27,047 | INFO     | . log creation = 1 s
[2025-10-08 11:50:25] 2025-10-08 09:49:27,047 | INFO     | ..............................
[2025-10-08 11:50:25] 2025-10-08 09:49:27,171 | INFO     | 
[2025-10-08 11:50:25] 2025-10-08 09:49:27,172 | INFO     | job summary report
[2025-10-08 11:50:25] 2025-10-08 09:49:27,172 | INFO     | --------------------------------------------------
[2025-10-08 11:50:25] 2025-10-08 09:49:27,172 | INFO     | PanDA job id: 6830323795
[2025-10-08 11:50:25] 2025-10-08 09:49:27,172 | INFO     | task id: 46376905
[2025-10-08 11:50:25] 2025-10-08 09:49:27,172 | INFO     | errors: (none)
[2025-10-08 11:50:25] 2025-10-08 09:49:27,172 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-08 11:50:25] 2025-10-08 09:49:27,172 | INFO     | pilot state: finished 
[2025-10-08 11:50:25] 2025-10-08 09:49:27,172 | INFO     | transexitcode: 0
[2025-10-08 11:50:25] 2025-10-08 09:49:27,172 | INFO     | exeerrorcode: 0
[2025-10-08 11:50:25] 2025-10-08 09:49:27,172 | INFO     | exeerrordiag: 
[2025-10-08 11:50:25] 2025-10-08 09:49:27,172 | INFO     | exitcode: 0
[2025-10-08 11:50:25] 2025-10-08 09:49:27,173 | INFO     | exitmsg: OK
[2025-10-08 11:50:25] 2025-10-08 09:49:27,173 | INFO     | cpuconsumptiontime: 48808 s
[2025-10-08 11:50:25] 2025-10-08 09:49:27,173 | INFO     | nevents: 400
[2025-10-08 11:50:25] 2025-10-08 09:49:27,173 | INFO     | neventsw: 0
[2025-10-08 11:50:25] 2025-10-08 09:49:27,173 | INFO     | pid: 4895
[2025-10-08 11:50:25] 2025-10-08 09:49:27,173 | INFO     | pgrp: 4895
[2025-10-08 11:50:25] 2025-10-08 09:49:27,173 | INFO     | corecount: 8
[2025-10-08 11:50:25] 2025-10-08 09:49:27,173 | INFO     | event service: False
[2025-10-08 11:50:25] 2025-10-08 09:49:27,173 | INFO     | sizes: {0: 2347988, 1: 2348674, 2: 2348873, 11: 2349135, 12: 2349163, 12863: 2378826, 12867: 2387826, 12869: 2387882, 12971: 2388076}
[2025-10-08 11:50:25] 2025-10-08 09:49:27,173 | INFO     | --------------------------------------------------
[2025-10-08 11:50:25] 2025-10-08 09:49:27,173 | INFO     | 
[2025-10-08 11:50:25] 2025-10-08 09:49:27,173 | INFO     | executing command: ls -lF /var/lib/boinc/slots/31
[2025-10-08 11:50:25] 2025-10-08 09:49:27,499 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-08 11:50:25] 2025-10-08 09:49:27,500 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-08 11:50:25] 2025-10-08 09:49:27,500 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-08 11:50:25] 2025-10-08 09:49:27,500 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-08 11:50:25] 2025-10-08 09:49:27,500 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-08 11:50:25] 2025-10-08 09:49:27,500 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-08 11:50:25] 2025-10-08 09:49:27,500 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-08 11:50:25] 2025-10-08 09:49:27,500 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-08 11:50:25] 2025-10-08 09:49:27,500 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-08 11:50:25] 2025-10-08 09:49:27,500 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-08 11:50:25] 2025-10-08 09:49:27,500 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-08 11:50:25] 2025-10-08 09:49:27,501 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-08 11:50:25] 2025-10-08 09:49:27,501 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-08 11:50:25] 2025-10-08 09:49:27,501 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-08 11:50:25] 2025-10-08 09:49:27,501 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-08 11:50:25] 2025-10-08 09:49:27,501 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-08 11:50:25] 2025-10-08 09:49:27,501 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-08 11:50:25] 2025-10-08 09:49:27,501 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-08 11:50:25] 2025-10-08 09:49:27,501 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-08 11:50:25] 2025-10-08 09:49:27,501 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-08 11:50:25] 2025-10-08 09:49:27,501 | INFO     | job 6830323795 has completed (purged errors)
[2025-10-08 11:50:25] 2025-10-08 09:49:27,502 | INFO     | overall cleanup function is called
[2025-10-08 11:50:25] 2025-10-08 09:49:27,976 | INFO     | PID=30769 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-08 11:50:25] 2025-10-08 09:49:27,977 | INFO     | .. there are 9 such processes running
[2025-10-08 11:50:25] 2025-10-08 09:49:28,511 | INFO     | --- collectZombieJob: --- 10, [4895]
[2025-10-08 11:50:25] 2025-10-08 09:49:28,511 | INFO     | zombie collector waiting for pid 4895
[2025-10-08 11:50:25] 2025-10-08 09:49:28,512 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-08 11:50:25] 2025-10-08 09:49:28,512 | INFO     | collected zombie processes
[2025-10-08 11:50:25] 2025-10-08 09:49:28,512 | INFO     | will attempt to kill all subprocesses of pid=4895
[2025-10-08 11:50:25] 2025-10-08 09:49:28,632 | INFO     | process IDs to be killed: [4895] (in reverse order)
[2025-10-08 11:50:25] 2025-10-08 09:49:29,622 | WARNING  | found no corresponding commands to process id(s)
[2025-10-08 11:50:25] 2025-10-08 09:49:29,622 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-08 11:50:25] 2025-10-08 09:49:29,631 | INFO     | did not find any defunct processes belonging to 4895
[2025-10-08 11:50:25] 2025-10-08 09:49:29,635 | INFO     | did not find any defunct processes belonging to 4895
[2025-10-08 11:50:25] 2025-10-08 09:49:29,636 | INFO     | ready for new job
[2025-10-08 11:50:25] 2025-10-08 09:49:29,636 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-08 11:50:25] 2025-10-08 09:49:29,638 | INFO     | ***************************************
[2025-10-08 11:50:25] 2025-10-08 09:49:29,638 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-08 11:50:25] 2025-10-08 09:49:29,638 | INFO     | ***************************************
[2025-10-08 11:50:25] 2025-10-08 09:49:29,638 | INFO     | 
[2025-10-08 11:50:25] 2025-10-08 09:49:29,639 | INFO     | pilot is running in a VM
[2025-10-08 11:50:25] 2025-10-08 09:49:29,639 | INFO     | architecture information:
[2025-10-08 11:50:25] 2025-10-08 09:49:29,652 | INFO     | executing command: cat /etc/os-release
[2025-10-08 11:50:25] 2025-10-08 09:49:29,864 | INFO     | cat /etc/os-release:
[2025-10-08 11:50:25] NAME="CentOS Linux"
[2025-10-08 11:50:25] VERSION="7 (Core)"
[2025-10-08 11:50:25] ID="centos"
[2025-10-08 11:50:25] ID_LIKE="rhel fedora"
[2025-10-08 11:50:25] VERSION_ID="7"
[2025-10-08 11:50:25] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-08 11:50:25] ANSI_COLOR="0;31"
[2025-10-08 11:50:25] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-08 11:50:25] HOME_URL="https://www.centos.org/"
[2025-10-08 11:50:25] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-08 11:50:25] 
[2025-10-08 11:50:25] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-08 11:50:25] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-08 11:50:25] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-08 11:50:25] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-08 11:50:25] 
[2025-10-08 11:50:25] 2025-10-08 09:49:29,864 | INFO     | ***************************************
[2025-10-08 11:50:25] 2025-10-08 09:49:30,367 | INFO     | executing command: df -mP /var/lib/boinc/slots/31
[2025-10-08 11:50:25] 2025-10-08 09:49:30,639 | INFO     | sufficient remaining disk space (496127442944 B)
[2025-10-08 11:50:25] 2025-10-08 09:49:30,639 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-08 11:50:25] 2025-10-08 09:49:30,639 | INFO     | current server update state: UPDATING_FINAL
[2025-10-08 11:50:25] 2025-10-08 09:49:30,640 | INFO     | update_server=False
[2025-10-08 11:50:25] 2025-10-08 09:49:30,640 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-08 11:50:25] 2025-10-08 09:49:30,640 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-08 11:50:25] 2025-10-08 09:49:30,641 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-08 11:50:25] 2025-10-08 09:49:30,642 | INFO     | aborting loop
[2025-10-08 11:50:25] 2025-10-08 09:49:30,782 | INFO     | all payload control threads have been joined
[2025-10-08 11:50:25] 2025-10-08 09:49:31,542 | INFO     | all data control threads have been joined
[2025-10-08 11:50:25] 2025-10-08 09:49:31,645 | INFO     | [job] retrieve thread has finished
[2025-10-08 11:50:25] 2025-10-08 09:49:31,647 | INFO     | [job] job monitor thread has finished
[2025-10-08 11:50:25] 2025-10-08 09:49:31,788 | INFO     | [payload] control thread has finished
[2025-10-08 11:50:25] 2025-10-08 09:49:31,920 | INFO     | [payload] execute_payloads thread has finished
[2025-10-08 11:50:25] 2025-10-08 09:49:32,007 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-08 11:50:25] 2025-10-08 09:49:32,022 | INFO     | all job control threads have been joined
[2025-10-08 11:50:25] 2025-10-08 09:49:32,127 | INFO     | [job] validate thread has finished
[2025-10-08 11:50:25] 2025-10-08 09:49:32,188 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-08 11:50:25] 2025-10-08 09:49:32,329 | INFO     | [payload] failed_post thread has finished
[2025-10-08 11:50:25] 2025-10-08 09:49:32,548 | INFO     | [data] control thread has finished
[2025-10-08 11:50:25] 2025-10-08 09:49:32,564 | INFO     | [job] create_data_payload thread has finished
[2025-10-08 11:50:25] 2025-10-08 09:49:32,813 | INFO     | [payload] validate_pre thread has finished
[2025-10-08 11:50:25] 2025-10-08 09:49:32,846 | INFO     | [data] copytool_in thread has finished
[2025-10-08 11:50:25] 2025-10-08 09:49:33,028 | INFO     | [job] control thread has finished
[2025-10-08 11:50:25] 2025-10-08 09:49:33,130 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-08 11:50:25] 2025-10-08 09:49:33,171 | INFO     | [payload] validate_post thread has finished
[2025-10-08 11:50:25] 2025-10-08 09:49:33,193 | INFO     | [job] queue monitor thread has finished
[2025-10-08 11:50:25] 2025-10-08 09:49:34,014 | INFO     | [data] copytool_out thread has finished
[2025-10-08 11:50:25] 2025-10-08 09:49:34,649 | INFO     | [data] queue_monitor thread has finished
[2025-10-08 11:50:25] 2025-10-08 09:50:00,148 | INFO     | PID=30769 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-08 11:50:25] 2025-10-08 09:50:00,149 | INFO     | .. there are 9 such processes running
[2025-10-08 11:50:25] 2025-10-08 09:50:00,150 | INFO     | found 0 job(s) in 20 queues
[2025-10-08 11:50:25] 2025-10-08 09:50:00,150 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-08 11:50:25] 2025-10-08 09:50:00,150 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-08 11:50:25] 2025-10-08 09:50:14,850 | INFO     | [monitor] cgroup control has ended
[2025-10-08 11:50:25] 2025-10-08 09:50:16,559 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140516358235968)>', '<ExcThread(monitor, started 140515559339776)>']
[2025-10-08 11:50:25] 2025-10-08 09:50:17,251 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-08 11:50:25] 2025-10-08 09:50:17,252 | INFO     | [monitor] control thread has ended
[2025-10-08 11:50:25] 2025-10-08 09:50:21,585 | INFO     | all workflow threads have been joined
[2025-10-08 11:50:25] 2025-10-08 09:50:21,585 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-08 11:50:25] 2025-10-08 09:50:21,586 | INFO     | traces error code: 0
[2025-10-08 11:50:25] 2025-10-08 09:50:21,586 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-08 11:50:25] 2025-10-08 09:50:22,026 [wrapper] ==== pilot stdout END ====
[2025-10-08 11:50:25] 2025-10-08 09:50:22,112 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-08 11:50:25] 2025-10-08 09:50:22,171 [wrapper] pilotpid: 30769
[2025-10-08 11:50:25] 2025-10-08 09:50:22,267 [wrapper] Pilot exit status: 0
[2025-10-08 11:50:25] 2025-10-08 09:50:22,693 [wrapper] pandaids: 6830323795
[2025-10-08 11:50:25] 2025-10-08 09:50:23,437 [wrapper] cleanup supervisor_pilot  9271 30770
[2025-10-08 11:50:25] 2025-10-08 09:50:23,502 [wrapper] Test setup, not cleaning
[2025-10-08 11:50:25] 2025-10-08 09:50:23,585 [wrapper] apfmon messages muted
[2025-10-08 11:50:25] 2025-10-08 09:50:23,686 [wrapper] ==== wrapper stdout END ====
[2025-10-08 11:50:25] 2025-10-08 09:50:23,798 [wrapper] ==== wrapper stderr END ====
[2025-10-08 11:50:25]  *** Error codes and diagnostics ***
[2025-10-08 11:50:25]     "exeErrorCode": 0,
[2025-10-08 11:50:25]     "exeErrorDiag": "",
[2025-10-08 11:50:25]     "pilotErrorCode": 0,
[2025-10-08 11:50:25]     "pilotErrorDiag": "",
[2025-10-08 11:50:25]  *** Listing of results directory ***
[2025-10-08 11:50:25] total 398292
[2025-10-08 11:50:25] -rw-r--r--. 1 boinc boinc    552446 Oct  4 23:29 pilot3.tar.gz
[2025-10-08 11:50:25] -rw-r--r--. 1 boinc boinc      5112 Oct  4 23:36 queuedata.json
[2025-10-08 11:50:25] -rwx------. 1 boinc boinc     36292 Oct  4 23:37 runpilot2-wrapper.sh
[2025-10-08 11:50:25] -rw-r--r--. 1 boinc boinc       100 Oct  8 08:12 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-08 11:50:25] -rwxr-xr-x. 1 boinc boinc      7986 Oct  8 08:12 run_atlas
[2025-10-08 11:50:25] -rw-r--r--. 1 boinc boinc       105 Oct  8 08:12 job.xml
[2025-10-08 11:50:25] -rw-r--r--. 1 boinc boinc      6393 Oct  8 08:12 init_data.xml
[2025-10-08 11:50:25] -rw-r--r--. 2 boinc boinc 213461866 Oct  8 08:12 EVNT.46376901._002487.pool.root.1
[2025-10-08 11:50:25] -rw-r--r--. 2 boinc boinc     15120 Oct  8 08:12 start_atlas.sh
[2025-10-08 11:50:25] drwxrwx--x. 2 boinc boinc        68 Oct  8 08:12 shared
[2025-10-08 11:50:25] -rw-r--r--. 2 boinc boinc    565603 Oct  8 08:12 input.tar.gz
[2025-10-08 11:50:25] -rw-r--r--. 1 boinc boinc         0 Oct  8 08:12 boinc_lockfile
[2025-10-08 11:50:25] -rw-r--r--. 1 boinc boinc      2519 Oct  8 08:12 pandaJob.out
[2025-10-08 11:50:25] -rw-------. 1 boinc boinc    979841 Oct  8 08:12 agis_schedconf.cvmfs.json
[2025-10-08 11:50:25] drwx------. 4 boinc boinc      4096 Oct  8 08:12 pilot3
[2025-10-08 11:50:25] -rw-------. 1 boinc boinc 186110876 Oct  8 11:46 HITS.46376905._068572.pool.root.1
[2025-10-08 11:50:25] -rw-r--r--. 1 boinc boinc       531 Oct  8 11:46 boinc_task_state.xml
[2025-10-08 11:50:25] -rw-------. 1 boinc boinc      1018 Oct  8 11:47 memory_monitor_summary.json
[2025-10-08 11:50:25] -rw-------. 1 boinc boinc   1560401 Oct  8 11:47 agis_ddmendpoints.agis.ALL.json
[2025-10-08 11:50:25] -rw-------. 1 boinc boinc    445316 Oct  8 11:47 log.46376905._068572.job.log.tgz.1
[2025-10-08 11:50:25] -rw-------. 1 boinc boinc      7789 Oct  8 11:49 heartbeat.json
[2025-10-08 11:50:25] -rw-r--r--. 1 boinc boinc        28 Oct  8 11:49 wrapper_checkpoint.txt
[2025-10-08 11:50:25] -rw-r--r--. 1 boinc boinc      8192 Oct  8 11:49 boinc_mmap_file
[2025-10-08 11:50:25] -rw-------. 1 boinc boinc        95 Oct  8 11:50 pilot_heartbeat.json
[2025-10-08 11:50:25] -rw-------. 1 boinc boinc      4885 Oct  8 11:50 pilotlog.txt
[2025-10-08 11:50:25] -rw-------. 1 boinc boinc   1752897 Oct  8 11:50 log.46376905._068572.job.log.1
[2025-10-08 11:50:25] -rw-------. 1 boinc boinc       357 Oct  8 11:50 output.list
[2025-10-08 11:50:25] -rw-r--r--. 1 boinc boinc       620 Oct  8 11:50 runtime_log
[2025-10-08 11:50:25] -rw-------. 1 boinc boinc   2222080 Oct  8 11:50 result.tar.gz
[2025-10-08 11:50:25] -rw-r--r--. 1 boinc boinc      8717 Oct  8 11:50 runtime_log.err
[2025-10-08 11:50:25] -rw-------. 1 boinc boinc       657 Oct  8 11:50 IxILDm37OP8n9Rq4apOajLDm4fhM0noT9bVof3QYDmoXEMDmRavwqm.diag
[2025-10-08 11:50:25] -rw-r--r--. 1 boinc boinc     20685 Oct  8 11:50 stderr.txt
[2025-10-08 11:50:25] HITS file was successfully produced:
[2025-10-08 11:50:25] -rw-------. 1 boinc boinc 186110876 Oct  8 11:46 shared/HITS.pool.root.1
[2025-10-08 11:50:25]  *** Contents of shared directory: ***
[2025-10-08 11:50:25] total 392956
[2025-10-08 11:50:25] -rw-r--r--. 2 boinc boinc 213461866 Oct  8 08:12 ATLAS.root_0
[2025-10-08 11:50:25] -rw-r--r--. 2 boinc boinc     15120 Oct  8 08:12 start_atlas.sh
[2025-10-08 11:50:25] -rw-r--r--. 2 boinc boinc    565603 Oct  8 08:12 input.tar.gz
[2025-10-08 11:50:25] -rw-------. 1 boinc boinc 186110876 Oct  8 11:46 HITS.pool.root.1
[2025-10-08 11:50:25] -rw-------. 1 boinc boinc   2222080 Oct  8 11:50 result.tar.gz
11:50:26 (26730): run_atlas exited; CPU time 48969.690177
11:50:26 (26730): called boinc_finish(0)

</stderr_txt>
]]>

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