Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
02:05:09 (6296): wrapper (7.7.26015): starting
02:05:09 (6296): wrapper: running run_atlas (--nthreads 8)
[2025-10-08 02:05:09] Arguments: --nthreads 8
[2025-10-08 02:05:09] Threads: 8
[2025-10-08 02:05:09] Checking for CVMFS
[2025-10-08 02:05:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 02:05:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 02:05:09] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 02:05:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 02:05:09] 2.11.2.0 5524 46741 116904 151459 1 57 11610957 18432000 917 130560 0 38698235 99.970 2159346 40310 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-08 02:05:09] CVMFS is ok
[2025-10-08 02:05:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-08 02:05:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-08 02:05:09] Further information can be found at the LHC@home message board.
[2025-10-08 02:05:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 02:05:09] Checking for apptainer binary...
[2025-10-08 02:05:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 02:05:09] Running /usr/bin/apptainer --version
[2025-10-08 02:05:09] apptainer version 1.3.2-1.el7
[2025-10-08 02:05:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 02:05:10] c-206-5.aglt2.org
[2025-10-08 02:05:10] apptainer works
[2025-10-08 02:05:10] Set ATHENA_PROC_NUMBER=8
[2025-10-08 02:05:10] Set ATHENA_CORE_NUMBER=8
[2025-10-08 02:05:10] Starting ATLAS job with PandaID=6826206287
[2025-10-08 02:05:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-08 05:42:03]  *** The last 200 lines of the pilot log: ***
[2025-10-08 05:42:03] 2025-10-08 09:41:30,393 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-08 05:42:03] 2025-10-08 09:41:30,393 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-08 05:42:03] 2025-10-08 09:41:30,400 | INFO     | fitting pss+swap vs Time
[2025-10-08 05:42:03] 2025-10-08 09:41:30,400 | INFO     | sum of square deviations: 2996454322.0
[2025-10-08 05:42:03] 2025-10-08 09:41:30,402 | INFO     | sum of deviations: 21499852233.999996
[2025-10-08 05:42:03] 2025-10-08 09:41:30,402 | INFO     | mean x: 1759910010.0
[2025-10-08 05:42:03] 2025-10-08 09:41:30,402 | INFO     | mean y: 2465746.0422535213
[2025-10-08 05:42:03] 2025-10-08 09:41:30,402 | INFO     | -- intersect: -12625060354.499937
[2025-10-08 05:42:03] 2025-10-08 09:41:30,403 | INFO     | intersect: -12625060354.499937
[2025-10-08 05:42:03] 2025-10-08 09:41:30,403 | INFO     | chi2: 2.002438030279358
[2025-10-08 05:42:03] 2025-10-08 09:41:30,404 | INFO     | sum of square deviations: 2790348132.0
[2025-10-08 05:42:03] 2025-10-08 09:41:30,405 | INFO     | sum of deviations: 34841747681.5
[2025-10-08 05:42:03] 2025-10-08 09:41:30,406 | INFO     | mean x: 1759909857.5
[2025-10-08 05:42:03] 2025-10-08 09:41:30,406 | INFO     | mean y: 2475419.966346154
[2025-10-08 05:42:03] 2025-10-08 09:41:30,406 | INFO     | -- intersect: -21972680473.305405
[2025-10-08 05:42:03] 2025-10-08 09:41:30,406 | INFO     | intersect: -21972680473.305405
[2025-10-08 05:42:03] 2025-10-08 09:41:30,407 | INFO     | chi2: 1.226857487905878
[2025-10-08 05:42:03] 2025-10-08 09:41:30,407 | INFO     | current chi2=1.226857487905878 (change=38.731812452906695 %)
[2025-10-08 05:42:03] 2025-10-08 09:41:30,407 | INFO     | sum of square deviations: 2593916542.0
[2025-10-08 05:42:03] 2025-10-08 09:41:30,409 | INFO     | sum of deviations: 33909679363.0
[2025-10-08 05:42:03] 2025-10-08 09:41:30,409 | INFO     | mean x: 1759909705.0
[2025-10-08 05:42:03] 2025-10-08 09:41:30,409 | INFO     | mean y: 2474696.280788177
[2025-10-08 05:42:03] 2025-10-08 09:41:30,410 | INFO     | -- intersect: -23004423497.277946
[2025-10-08 05:42:03] 2025-10-08 09:41:30,410 | INFO     | intersect: -23004423497.277946
[2025-10-08 05:42:03] 2025-10-08 09:41:30,410 | INFO     | chi2: 1.2270433094388953
[2025-10-08 05:42:03] 2025-10-08 09:41:30,411 | INFO     | current chi2=1.2270433094388953 (change=-0.015146138394154525 %)
[2025-10-08 05:42:03] 2025-10-08 09:41:30,411 | INFO     | right removable region: 202
[2025-10-08 05:42:03] 2025-10-08 09:41:30,411 | INFO     | sum of square deviations: 2790348132.0
[2025-10-08 05:42:03] 2025-10-08 09:41:30,413 | INFO     | sum of deviations: -6994681997.999999
[2025-10-08 05:42:03] 2025-10-08 09:41:30,413 | INFO     | mean x: 1759910162.5
[2025-10-08 05:42:03] 2025-10-08 09:41:30,413 | INFO     | mean y: 2486599.326923077
[2025-10-08 05:42:03] 2025-10-08 09:41:30,414 | INFO     | -- intersect: 4414126778.042804
[2025-10-08 05:42:03] 2025-10-08 09:41:30,414 | INFO     | intersect: 4414126778.042804
[2025-10-08 05:42:03] 2025-10-08 09:41:30,414 | INFO     | chi2: 0.7958376586698466
[2025-10-08 05:42:03] 2025-10-08 09:41:30,414 | INFO     | current chi2=0.7958376586698466 (change=60.25656491557842 %)
[2025-10-08 05:42:03] 2025-10-08 09:41:30,415 | INFO     | sum of square deviations: 2593916542.0
[2025-10-08 05:42:03] 2025-10-08 09:41:30,417 | INFO     | sum of deviations: -8281866666.000001
[2025-10-08 05:42:03] 2025-10-08 09:41:30,417 | INFO     | mean x: 1759910315.0
[2025-10-08 05:42:03] 2025-10-08 09:41:30,417 | INFO     | mean y: 2487608.0443349755
[2025-10-08 05:42:03] 2025-10-08 09:41:30,417 | INFO     | -- intersect: 5621535999.520325
[2025-10-08 05:42:03] 2025-10-08 09:41:30,417 | INFO     | intersect: 5621535999.520325
[2025-10-08 05:42:03] 2025-10-08 09:41:30,418 | INFO     | chi2: 0.7931703062114097
[2025-10-08 05:42:03] 2025-10-08 09:41:30,418 | INFO     | current chi2=0.7931703062114097 (change=0.33516288521644433 %)
[2025-10-08 05:42:03] 2025-10-08 09:41:30,418 | INFO     | left removable region: 20
[2025-10-08 05:42:03] 2025-10-08 09:41:30,419 | INFO     | sum of square deviations: 1869302025.5
[2025-10-08 05:42:03] 2025-10-08 09:41:30,420 | INFO     | sum of deviations: 2502961424.5
[2025-10-08 05:42:03] 2025-10-08 09:41:30,420 | INFO     | mean x: 1759910284.5
[2025-10-08 05:42:03] 2025-10-08 09:41:30,420 | INFO     | mean y: 2500341.0714285714
[2025-10-08 05:42:03] 2025-10-08 09:41:30,421 | INFO     | -- intersect: -2353987531.1899176
[2025-10-08 05:42:03] 2025-10-08 09:41:30,421 | INFO     | intersect: -2353987531.1899176
[2025-10-08 05:42:03] 2025-10-08 09:41:30,421 | INFO     | chi2: 0.0001722721483059505
[2025-10-08 05:42:03] 2025-10-08 09:41:30,421 | INFO     | -- intersect: -2353987531.1899176
[2025-10-08 05:42:03] 2025-10-08 09:41:30,422 | INFO     | current memory leak: 1.34 B/s (using 182 data points, chi2=0.00)
[2025-10-08 05:42:03] 2025-10-08 09:41:30,422 | INFO     | could have reported an average CPU frequency of 2421 MHz (11 samples)
[2025-10-08 05:42:03] 2025-10-08 09:41:30,423 | INFO     | ..............................
[2025-10-08 05:42:03] 2025-10-08 09:41:30,423 | INFO     | . Timing measurements:
[2025-10-08 05:42:03] 2025-10-08 09:41:30,423 | INFO     | . get job = 0 s
[2025-10-08 05:42:03] 2025-10-08 09:41:30,423 | INFO     | . initial setup = 2 s
[2025-10-08 05:42:03] 2025-10-08 09:41:30,423 | INFO     | . payload setup = 4 s
[2025-10-08 05:42:03] 2025-10-08 09:41:30,423 | INFO     | . stage-in = 0 s
[2025-10-08 05:42:03] 2025-10-08 09:41:30,424 | INFO     | . payload execution = 12939 s
[2025-10-08 05:42:03] 2025-10-08 09:41:30,424 | INFO     | . stage-out = 1 s
[2025-10-08 05:42:03] 2025-10-08 09:41:30,424 | INFO     | . log creation = 0 s
[2025-10-08 05:42:03] 2025-10-08 09:41:30,424 | INFO     | ..............................
[2025-10-08 05:42:03] 2025-10-08 09:41:30,846 | INFO     | 
[2025-10-08 05:42:03] 2025-10-08 09:41:30,846 | INFO     | job summary report
[2025-10-08 05:42:03] 2025-10-08 09:41:30,846 | INFO     | --------------------------------------------------
[2025-10-08 05:42:03] 2025-10-08 09:41:30,849 | INFO     | PanDA job id: 6826206287
[2025-10-08 05:42:03] 2025-10-08 09:41:30,849 | INFO     | task id: 46373048
[2025-10-08 05:42:03] 2025-10-08 09:41:30,849 | INFO     | errors: (none)
[2025-10-08 05:42:03] 2025-10-08 09:41:30,849 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-08 05:42:03] 2025-10-08 09:41:30,850 | INFO     | pilot state: finished 
[2025-10-08 05:42:03] 2025-10-08 09:41:30,850 | INFO     | transexitcode: 0
[2025-10-08 05:42:03] 2025-10-08 09:41:30,850 | INFO     | exeerrorcode: 0
[2025-10-08 05:42:03] 2025-10-08 09:41:30,850 | INFO     | exeerrordiag: 
[2025-10-08 05:42:03] 2025-10-08 09:41:30,850 | INFO     | exitcode: 0
[2025-10-08 05:42:03] 2025-10-08 09:41:30,851 | INFO     | exitmsg: OK
[2025-10-08 05:42:03] 2025-10-08 09:41:30,851 | INFO     | cpuconsumptiontime: 99940 s
[2025-10-08 05:42:03] 2025-10-08 09:41:30,851 | INFO     | nevents: 400
[2025-10-08 05:42:03] 2025-10-08 09:41:30,851 | INFO     | neventsw: 0
[2025-10-08 05:42:03] 2025-10-08 09:41:30,851 | INFO     | pid: 25728
[2025-10-08 05:42:03] 2025-10-08 09:41:30,851 | INFO     | pgrp: 25728
[2025-10-08 05:42:03] 2025-10-08 09:41:30,852 | INFO     | corecount: 8
[2025-10-08 05:42:03] 2025-10-08 09:41:30,852 | INFO     | event service: False
[2025-10-08 05:42:03] 2025-10-08 09:41:30,852 | INFO     | sizes: {0: 2348841, 3: 2349103, 11: 2349131, 12947: 2379258, 12949: 2388256, 12950: 2388312, 12955: 2388634}
[2025-10-08 05:42:03] 2025-10-08 09:41:30,852 | INFO     | --------------------------------------------------
[2025-10-08 05:42:03] 2025-10-08 09:41:30,852 | INFO     | 
[2025-10-08 05:42:03] 2025-10-08 09:41:30,853 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-08 05:42:03] 2025-10-08 09:41:30,868 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-08 05:42:03] 2025-10-08 09:41:30,868 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-08 05:42:03] 2025-10-08 09:41:30,868 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-08 05:42:03] 2025-10-08 09:41:30,868 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-08 05:42:03] 2025-10-08 09:41:30,869 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-08 05:42:03] 2025-10-08 09:41:30,869 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-08 05:42:03] 2025-10-08 09:41:30,869 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-08 05:42:03] 2025-10-08 09:41:30,869 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-08 05:42:03] 2025-10-08 09:41:30,869 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-08 05:42:03] 2025-10-08 09:41:30,870 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-08 05:42:03] 2025-10-08 09:41:30,870 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-08 05:42:03] 2025-10-08 09:41:30,870 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-08 05:42:03] 2025-10-08 09:41:30,870 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-08 05:42:03] 2025-10-08 09:41:30,870 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-08 05:42:03] 2025-10-08 09:41:30,871 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-08 05:42:03] 2025-10-08 09:41:30,871 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-08 05:42:03] 2025-10-08 09:41:30,871 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-08 05:42:03] 2025-10-08 09:41:30,871 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-08 05:42:03] 2025-10-08 09:41:30,871 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-08 05:42:03] 2025-10-08 09:41:30,871 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-08 05:42:03] 2025-10-08 09:41:30,872 | INFO     | job 6826206287 has completed (purged errors)
[2025-10-08 05:42:03] 2025-10-08 09:41:30,872 | INFO     | overall cleanup function is called
[2025-10-08 05:42:03] 2025-10-08 09:41:31,881 | INFO     | --- collectZombieJob: --- 10, [25728]
[2025-10-08 05:42:03] 2025-10-08 09:41:31,881 | INFO     | zombie collector waiting for pid 25728
[2025-10-08 05:42:03] 2025-10-08 09:41:31,881 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-08 05:42:03] 2025-10-08 09:41:31,881 | INFO     | collected zombie processes
[2025-10-08 05:42:03] 2025-10-08 09:41:31,881 | INFO     | will attempt to kill all subprocesses of pid=25728
[2025-10-08 05:42:03] 2025-10-08 09:41:32,004 | INFO     | process IDs to be killed: [25728] (in reverse order)
[2025-10-08 05:42:03] 2025-10-08 09:41:32,043 | WARNING  | found no corresponding commands to process id(s)
[2025-10-08 05:42:03] 2025-10-08 09:41:32,043 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-08 05:42:03] 2025-10-08 09:41:32,046 | INFO     | did not find any defunct processes belonging to 25728
[2025-10-08 05:42:03] 2025-10-08 09:41:32,048 | INFO     | did not find any defunct processes belonging to 25728
[2025-10-08 05:42:03] 2025-10-08 09:41:32,048 | INFO     | ready for new job
[2025-10-08 05:42:03] 2025-10-08 09:41:32,048 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-08 05:42:03] 2025-10-08 09:41:32,050 | INFO     | ***************************************
[2025-10-08 05:42:03] 2025-10-08 09:41:32,050 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-08 05:42:03] 2025-10-08 09:41:32,050 | INFO     | ***************************************
[2025-10-08 05:42:03] 2025-10-08 09:41:32,050 | INFO     | 
[2025-10-08 05:42:03] 2025-10-08 09:41:32,052 | INFO     | architecture information:
[2025-10-08 05:42:03] 2025-10-08 09:41:32,052 | INFO     | executing command: cat /etc/os-release
[2025-10-08 05:42:03] 2025-10-08 09:41:32,062 | INFO     | cat /etc/os-release:
[2025-10-08 05:42:03] NAME="CentOS Linux"
[2025-10-08 05:42:03] VERSION="7 (Core)"
[2025-10-08 05:42:03] ID="centos"
[2025-10-08 05:42:03] ID_LIKE="rhel fedora"
[2025-10-08 05:42:03] VERSION_ID="7"
[2025-10-08 05:42:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-08 05:42:03] ANSI_COLOR="0;31"
[2025-10-08 05:42:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-08 05:42:03] HOME_URL="https://www.centos.org/"
[2025-10-08 05:42:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-08 05:42:03] 
[2025-10-08 05:42:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-08 05:42:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-08 05:42:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-08 05:42:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-08 05:42:03] 
[2025-10-08 05:42:03] 2025-10-08 09:41:32,063 | INFO     | ***************************************
[2025-10-08 05:42:03] 2025-10-08 09:41:32,566 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-08 05:42:03] 2025-10-08 09:41:32,576 | INFO     | sufficient remaining disk space (27916238848 B)
[2025-10-08 05:42:03] 2025-10-08 09:41:32,577 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-08 05:42:03] 2025-10-08 09:41:32,577 | INFO     | current server update state: UPDATING_FINAL
[2025-10-08 05:42:03] 2025-10-08 09:41:32,577 | INFO     | update_server=False
[2025-10-08 05:42:03] 2025-10-08 09:41:32,577 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-08 05:42:03] 2025-10-08 09:41:32,577 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-08 05:42:03] 2025-10-08 09:41:32,869 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-08 05:42:03] 2025-10-08 09:41:33,156 | INFO     | all job control threads have been joined
[2025-10-08 05:42:03] 2025-10-08 09:41:33,183 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-08 05:42:03] 2025-10-08 09:41:33,183 | INFO     | aborting loop
[2025-10-08 05:42:03] 2025-10-08 09:41:33,238 | INFO     | all data control threads have been joined
[2025-10-08 05:42:03] 2025-10-08 09:41:33,463 | INFO     | all payload control threads have been joined
[2025-10-08 05:42:03] 2025-10-08 09:41:33,583 | INFO     | [job] retrieve thread has finished
[2025-10-08 05:42:03] 2025-10-08 09:41:33,998 | INFO     | [payload] execute_payloads thread has finished
[2025-10-08 05:42:03] 2025-10-08 09:41:34,034 | INFO     | [payload] validate_pre thread has finished
[2025-10-08 05:42:03] 2025-10-08 09:41:34,042 | INFO     | [data] copytool_in thread has finished
[2025-10-08 05:42:03] 2025-10-08 09:41:34,162 | INFO     | [job] control thread has finished
[2025-10-08 05:42:03] 2025-10-08 09:41:34,188 | INFO     | [job] job monitor thread has finished
[2025-10-08 05:42:03] 2025-10-08 09:41:34,246 | INFO     | [data] control thread has finished
[2025-10-08 05:42:03] 2025-10-08 09:41:34,338 | INFO     | [payload] failed_post thread has finished
[2025-10-08 05:42:03] 2025-10-08 09:41:34,464 | INFO     | [payload] control thread has finished
[2025-10-08 05:42:03] 2025-10-08 09:41:34,875 | INFO     | [data] copytool_out thread has finished
[2025-10-08 05:42:03] 2025-10-08 09:41:34,907 | INFO     | [payload] validate_post thread has finished
[2025-10-08 05:42:03] 2025-10-08 09:41:34,920 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-08 05:42:03] 2025-10-08 09:41:34,952 | INFO     | [job] validate thread has finished
[2025-10-08 05:42:03] 2025-10-08 09:41:34,962 | INFO     | [job] create_data_payload thread has finished
[2025-10-08 05:42:03] 2025-10-08 09:41:35,538 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-08 05:42:03] 2025-10-08 09:41:36,543 | INFO     | [job] queue monitor thread has finished
[2025-10-08 05:42:03] 2025-10-08 09:41:36,583 | INFO     | [data] queue_monitor thread has finished
[2025-10-08 05:42:03] 2025-10-08 09:41:41,484 | INFO     | [monitor] cgroup control has ended
[2025-10-08 05:42:03] 2025-10-08 09:41:42,538 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140317580666688)>', '<ExcThread(monitor, started 140316715775744)>']
[2025-10-08 05:42:03] 2025-10-08 09:41:47,564 | INFO     | all workflow threads have been joined
[2025-10-08 05:42:03] 2025-10-08 09:41:47,564 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-08 05:42:03] 2025-10-08 09:41:47,564 | INFO     | traces error code: 0
[2025-10-08 05:42:03] 2025-10-08 09:41:47,565 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-08 05:42:03] 2025-10-08 09:42:02,328 | INFO     | 12973s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-08 05:42:03] 2025-10-08 09:42:03,463 | INFO     | PID=12519 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-08 05:42:03] 2025-10-08 09:42:03,463 | INFO     | .. there are 3 such processes running
[2025-10-08 05:42:03] 2025-10-08 09:42:03,463 | INFO     | found 0 job(s) in 20 queues
[2025-10-08 05:42:03] 2025-10-08 09:42:03,464 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-08 05:42:03] 2025-10-08 09:42:03,464 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-08 05:42:03] 2025-10-08 09:42:03,464 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-08 05:42:03] 2025-10-08 09:42:03,464 | INFO     | [monitor] control thread has ended
[2025-10-08 05:42:03] 2025-10-08 09:42:03,568 [wrapper] ==== pilot stdout END ====
[2025-10-08 05:42:03] 2025-10-08 09:42:03,570 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-08 05:42:03] 2025-10-08 09:42:03,572 [wrapper] pilotpid: 12519
[2025-10-08 05:42:03] 2025-10-08 09:42:03,574 [wrapper] Pilot exit status: 0
[2025-10-08 05:42:03] 2025-10-08 09:42:03,582 [wrapper] pandaids: 6826206287
[2025-10-08 05:42:03] 2025-10-08 09:42:03,609 [wrapper] cleanup supervisor_pilot  7240 12520
[2025-10-08 05:42:03] 2025-10-08 09:42:03,611 [wrapper] Test setup, not cleaning
[2025-10-08 05:42:03] 2025-10-08 09:42:03,613 [wrapper] apfmon messages muted
[2025-10-08 05:42:03] 2025-10-08 09:42:03,615 [wrapper] ==== wrapper stdout END ====
[2025-10-08 05:42:03] 2025-10-08 09:42:03,617 [wrapper] ==== wrapper stderr END ====
[2025-10-08 05:42:03]  *** Error codes and diagnostics ***
[2025-10-08 05:42:03]     "exeErrorCode": 0,
[2025-10-08 05:42:03]     "exeErrorDiag": "",
[2025-10-08 05:42:03]     "pilotErrorCode": 0,
[2025-10-08 05:42:03]     "pilotErrorDiag": "",
[2025-10-08 05:42:03]  *** Listing of results directory ***
[2025-10-08 05:42:03] total 419340
[2025-10-08 05:42:03] -rw-r--r-- 1 boincer umatlas    563267 Aug  1 05:52 pilot3.tar.gz
[2025-10-08 05:42:03] -rw-r--r-- 1 boincer umatlas      5112 Sep 30 17:35 queuedata.json
[2025-10-08 05:42:03] -rwx------ 1 boincer umatlas     36292 Sep 30 17:36 runpilot2-wrapper.sh
[2025-10-08 05:42:03] -rw-r--r-- 1 boincer umatlas       100 Oct  8 02:05 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-08 05:42:03] -rwxr-xr-x 1 boincer umatlas      7986 Oct  8 02:05 run_atlas
[2025-10-08 05:42:03] -rw-r--r-- 1 boincer umatlas       105 Oct  8 02:05 job.xml
[2025-10-08 05:42:03] -rw-r--r-- 2 boincer umatlas 220604915 Oct  8 02:05 EVNT.46373045._002348.pool.root.1
[2025-10-08 05:42:03] -rw-r--r-- 2 boincer umatlas     15120 Oct  8 02:05 start_atlas.sh
[2025-10-08 05:42:03] drwxrwx--x 2 boincer umatlas      4096 Oct  8 02:05 shared
[2025-10-08 05:42:03] -rw-r--r-- 2 boincer umatlas    576706 Oct  8 02:05 input.tar.gz
[2025-10-08 05:42:03] -rw-r--r-- 1 boincer umatlas         0 Oct  8 02:05 boinc_lockfile
[2025-10-08 05:42:03] -rw-r--r-- 1 boincer umatlas      2538 Oct  8 02:05 pandaJob.out
[2025-10-08 05:42:03] -rw------- 1 boincer umatlas    979841 Oct  8 02:05 agis_schedconf.cvmfs.json
[2025-10-08 05:42:03] drwx------ 4 boincer umatlas      4096 Oct  8 02:05 pilot3
[2025-10-08 05:42:03] -rw-r--r-- 1 boincer umatlas      5953 Oct  8 05:40 init_data.xml
[2025-10-08 05:42:03] -rw------- 1 boincer umatlas 200362773 Oct  8 05:40 HITS.46373048._071427.pool.root.1
[2025-10-08 05:42:03] -rw-r--r-- 1 boincer umatlas       531 Oct  8 05:41 boinc_task_state.xml
[2025-10-08 05:42:03] -rw------- 1 boincer umatlas      1052 Oct  8 05:41 memory_monitor_summary.json
[2025-10-08 05:42:03] -rw------- 1 boincer umatlas   1560401 Oct  8 05:41 agis_ddmendpoints.agis.ALL.json
[2025-10-08 05:42:03] -rw------- 1 boincer umatlas    440050 Oct  8 05:41 log.46373048._071427.job.log.tgz.1
[2025-10-08 05:42:03] -rw------- 1 boincer umatlas        95 Oct  8 05:41 pilot_heartbeat.json
[2025-10-08 05:42:03] -rw------- 1 boincer umatlas      7850 Oct  8 05:41 heartbeat.json
[2025-10-08 05:42:03] -rw-r--r-- 1 boincer umatlas        29 Oct  8 05:41 wrapper_checkpoint.txt
[2025-10-08 05:42:03] -rw-r--r-- 1 boincer umatlas      8192 Oct  8 05:41 boinc_mmap_file
[2025-10-08 05:42:03] -rw------- 1 boincer umatlas       936 Oct  8 05:42 pilotlog.txt
[2025-10-08 05:42:03] -rw------- 1 boincer umatlas   1821713 Oct  8 05:42 log.46373048._071427.job.log.1
[2025-10-08 05:42:03] -rw------- 1 boincer umatlas       357 Oct  8 05:42 output.list
[2025-10-08 05:42:03] -rw-r--r-- 1 boincer umatlas       620 Oct  8 05:42 runtime_log
[2025-10-08 05:42:03] -rw------- 1 boincer umatlas   2283520 Oct  8 05:42 result.tar.gz
[2025-10-08 05:42:03] -rw------- 1 boincer umatlas       662 Oct  8 05:42 ZtJNDm5BxN8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmD29MDmkucWFn.diag
[2025-10-08 05:42:03] -rw-r--r-- 1 boincer umatlas      8699 Oct  8 05:42 runtime_log.err
[2025-10-08 05:42:03] -rw-r--r-- 1 boincer umatlas     20903 Oct  8 05:42 stderr.txt
[2025-10-08 05:42:03] HITS file was successfully produced:
[2025-10-08 05:42:03] -rw------- 1 boincer umatlas 200362773 Oct  8 05:40 shared/HITS.pool.root.1
[2025-10-08 05:42:03]  *** Contents of shared directory: ***
[2025-10-08 05:42:03] total 413924
[2025-10-08 05:42:03] -rw-r--r-- 2 boincer umatlas 220604915 Oct  8 02:05 ATLAS.root_0
[2025-10-08 05:42:03] -rw-r--r-- 2 boincer umatlas     15120 Oct  8 02:05 start_atlas.sh
[2025-10-08 05:42:03] -rw-r--r-- 2 boincer umatlas    576706 Oct  8 02:05 input.tar.gz
[2025-10-08 05:42:03] -rw------- 1 boincer umatlas 200362773 Oct  8 05:40 HITS.pool.root.1
[2025-10-08 05:42:03] -rw------- 1 boincer umatlas   2283520 Oct  8 05:42 result.tar.gz
05:42:05 (6296): run_atlas exited; CPU time 100088.358895
05:42:05 (6296): called boinc_finish(0)

</stderr_txt>
]]>

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