Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
01:56:16 (2223113): wrapper (7.7.26015): starting
01:56:16 (2223113): wrapper: running run_atlas (--nthreads 8)
[2025-10-08 01:56:16] Arguments: --nthreads 8
[2025-10-08 01:56:16] Threads: 8
[2025-10-08 01:56:16] Checking for CVMFS
[2025-10-08 01:56:16] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 01:56:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 01:56:17] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 01:56:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 01:56:17] 2.13.2.0 2216807 123090 414948 151459 3 559 38341732 40960001 13466 16776704 30 233750921 99.699 192348088 21722 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-08 01:56:17] CVMFS is ok
[2025-10-08 01:56:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-08 01:56:17] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-08 01:56:17] Further information can be found at the LHC@home message board.
[2025-10-08 01:56:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 01:56:17] Checking for apptainer binary...
[2025-10-08 01:56:17] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 01:56:17] Running /usr/bin/apptainer --version
[2025-10-08 01:56:17] apptainer version 1.4.2-1.el9
[2025-10-08 01:56:17] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 01:56:17] c7-11-11.aglt2.org
[2025-10-08 01:56:17] apptainer works
[2025-10-08 01:56:17] Set ATHENA_PROC_NUMBER=8
[2025-10-08 01:56:17] Set ATHENA_CORE_NUMBER=8
[2025-10-08 01:56:17] Starting ATLAS job with PandaID=6833156777
[2025-10-08 01:56:17] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-08 03:45:07]  *** The last 200 lines of the pilot log: ***
[2025-10-08 03:45:07] 2025-10-08 07:43:46,414 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-08 03:45:07] 2025-10-08 07:43:46,414 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-08 03:45:07] 2025-10-08 07:43:46,416 | INFO     | fitting pss+swap vs Time
[2025-10-08 03:45:07] 2025-10-08 07:43:46,416 | INFO     | sum of square deviations: 358993081.33333224
[2025-10-08 03:45:07] 2025-10-08 07:43:46,417 | INFO     | sum of deviations: -8941419225.0
[2025-10-08 03:45:07] 2025-10-08 07:43:46,417 | INFO     | mean x: 1759906187.3333333
[2025-10-08 03:45:07] 2025-10-08 07:43:46,417 | INFO     | mean y: 2069357.4285714286
[2025-10-08 03:45:07] 2025-10-08 07:43:46,417 | INFO     | -- intersect: 43835947601.470474
[2025-10-08 03:45:07] 2025-10-08 07:43:46,417 | INFO     | intersect: 43835947601.470474
[2025-10-08 03:45:07] 2025-10-08 07:43:46,417 | INFO     | chi2: 3.6392544046644586
[2025-10-08 03:45:07] 2025-10-08 07:43:46,417 | INFO     | sum of square deviations: 310122137.4399992
[2025-10-08 03:45:07] 2025-10-08 07:43:46,418 | INFO     | sum of deviations: 8674741377.879997
[2025-10-08 03:45:07] 2025-10-08 07:43:46,418 | INFO     | mean x: 1759906034.84
[2025-10-08 03:45:07] 2025-10-08 07:43:46,418 | INFO     | mean y: 2123450.43
[2025-10-08 03:45:07] 2025-10-08 07:43:46,418 | INFO     | -- intersect: -49225996243.41478
[2025-10-08 03:45:07] 2025-10-08 07:43:46,418 | INFO     | intersect: -49225996243.41478
[2025-10-08 03:45:07] 2025-10-08 07:43:46,446 | INFO     | chi2: 1.3220174585332254
[2025-10-08 03:45:07] 2025-10-08 07:43:46,447 | INFO     | current chi2=1.3220174585332254 (change=63.67339813235409 %)
[2025-10-08 03:45:07] 2025-10-08 07:43:46,447 | INFO     | sum of square deviations: 265877916.14736822
[2025-10-08 03:45:07] 2025-10-08 07:43:46,447 | INFO     | sum of deviations: 8473138587.90526
[2025-10-08 03:45:07] 2025-10-08 07:43:46,447 | INFO     | mean x: 1759905882.305263
[2025-10-08 03:45:07] 2025-10-08 07:43:46,447 | INFO     | mean y: 2122741.5894736843
[2025-10-08 03:45:07] 2025-10-08 07:43:46,447 | INFO     | -- intersect: -56083492259.90971
[2025-10-08 03:45:07] 2025-10-08 07:43:46,447 | INFO     | intersect: -56083492259.90971
[2025-10-08 03:45:07] 2025-10-08 07:43:46,447 | INFO     | chi2: 1.3240091646301262
[2025-10-08 03:45:07] 2025-10-08 07:43:46,448 | INFO     | current chi2=1.3240091646301262 (change=-0.1506565653913977 %)
[2025-10-08 03:45:07] 2025-10-08 07:43:46,448 | INFO     | right removable region: 94
[2025-10-08 03:45:07] 2025-10-08 07:43:46,448 | INFO     | sum of square deviations: 310107070.75000066
[2025-10-08 03:45:07] 2025-10-08 07:43:46,448 | INFO     | sum of deviations: -19007551391.85
[2025-10-08 03:45:07] 2025-10-08 07:43:46,448 | INFO     | mean x: 1759906339.85
[2025-10-08 03:45:07] 2025-10-08 07:43:46,448 | INFO     | mean y: 2099781.81
[2025-10-08 03:45:07] 2025-10-08 07:43:46,448 | INFO     | -- intersect: 107872939742.46715
[2025-10-08 03:45:07] 2025-10-08 07:43:46,448 | INFO     | intersect: 107872939742.46715
[2025-10-08 03:45:07] 2025-10-08 07:43:46,449 | INFO     | chi2: 2.4516187549731323
[2025-10-08 03:45:07] 2025-10-08 07:43:46,449 | INFO     | current chi2=2.4516187549731323 (change=32.63403757014418 %)
[2025-10-08 03:45:07] 2025-10-08 07:43:46,449 | INFO     | sum of square deviations: 265872310.10526308
[2025-10-08 03:45:07] 2025-10-08 07:43:46,436 | INFO     | time since job start (6438s) is within the limit (172800.0s)
[2025-10-08 03:45:07] 2025-10-08 07:43:46,457 | INFO     | sum of deviations: -16212688904.0
[2025-10-08 03:45:07] 2025-10-08 07:43:46,458 | INFO     | mean x: 1759906492.368421
[2025-10-08 03:45:07] 2025-10-08 07:43:46,458 | INFO     | mean y: 2090113.6
[2025-10-08 03:45:07] 2025-10-08 07:43:46,458 | INFO     | -- intersect: 107319833919.27298
[2025-10-08 03:45:07] 2025-10-08 07:43:46,458 | INFO     | intersect: 107319833919.27298
[2025-10-08 03:45:07] 2025-10-08 07:43:46,458 | INFO     | chi2: 2.44989432784667
[2025-10-08 03:45:07] 2025-10-08 07:43:46,458 | INFO     | current chi2=2.44989432784667 (change=0.07033830700489066 %)
[2025-10-08 03:45:07] 2025-10-08 07:43:46,458 | INFO     | left removable region: 20
[2025-10-08 03:45:07] 2025-10-08 07:43:46,458 | INFO     | sum of square deviations: 125646325.13513508
[2025-10-08 03:45:07] 2025-10-08 07:43:46,458 | INFO     | sum of deviations: -170567716.56756765
[2025-10-08 03:45:07] 2025-10-08 07:43:46,458 | INFO     | mean x: 1759906461.891892
[2025-10-08 03:45:07] 2025-10-08 07:43:46,459 | INFO     | mean y: 2155117.554054054
[2025-10-08 03:45:07] 2025-10-08 07:43:46,459 | INFO     | -- intersect: 2391267781.6495147
[2025-10-08 03:45:07] 2025-10-08 07:43:46,459 | INFO     | intersect: 2391267781.6495147
[2025-10-08 03:45:07] 2025-10-08 07:43:46,459 | INFO     | chi2: 0.017005380399028876
[2025-10-08 03:45:07] 2025-10-08 07:43:46,459 | INFO     | -- intersect: 2391267781.6495147
[2025-10-08 03:45:07] 2025-10-08 07:43:46,459 | INFO     | current memory leak: -1.36 B/s (using 74 data points, chi2=0.02)
[2025-10-08 03:45:07] 2025-10-08 07:43:46,459 | INFO     | could have reported an average CPU frequency of 3262 MHz (7 samples)
[2025-10-08 03:45:07] 2025-10-08 07:43:46,459 | INFO     | ..............................
[2025-10-08 03:45:07] 2025-10-08 07:43:46,460 | INFO     | . Timing measurements:
[2025-10-08 03:45:07] 2025-10-08 07:43:46,460 | INFO     | . get job = 0 s
[2025-10-08 03:45:07] 2025-10-08 07:43:46,460 | INFO     | . initial setup = 2 s
[2025-10-08 03:45:07] 2025-10-08 07:43:46,460 | INFO     | . payload setup = 5 s
[2025-10-08 03:45:07] 2025-10-08 07:43:46,460 | INFO     | . stage-in = 0 s
[2025-10-08 03:45:07] 2025-10-08 07:43:46,460 | INFO     | . payload execution = 6367 s
[2025-10-08 03:45:07] 2025-10-08 07:43:46,460 | INFO     | . stage-out = 5 s
[2025-10-08 03:45:07] 2025-10-08 07:43:46,460 | INFO     | . log creation = 0 s
[2025-10-08 03:45:07] 2025-10-08 07:43:46,460 | INFO     | ..............................
[2025-10-08 03:45:07] 2025-10-08 07:43:47,414 | INFO     | 
[2025-10-08 03:45:07] 2025-10-08 07:43:47,415 | INFO     | job summary report
[2025-10-08 03:45:07] 2025-10-08 07:43:47,415 | INFO     | --------------------------------------------------
[2025-10-08 03:45:07] 2025-10-08 07:43:47,415 | INFO     | PanDA job id: 6833156777
[2025-10-08 03:45:07] 2025-10-08 07:43:47,415 | INFO     | task id: 46376905
[2025-10-08 03:45:07] 2025-10-08 07:43:47,415 | INFO     | errors: (none)
[2025-10-08 03:45:07] 2025-10-08 07:43:47,415 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-08 03:45:07] 2025-10-08 07:43:47,415 | INFO     | pilot state: finished 
[2025-10-08 03:45:07] 2025-10-08 07:43:47,415 | INFO     | transexitcode: 0
[2025-10-08 03:45:07] 2025-10-08 07:43:47,415 | INFO     | exeerrorcode: 0
[2025-10-08 03:45:07] 2025-10-08 07:43:47,415 | INFO     | exeerrordiag: 
[2025-10-08 03:45:07] 2025-10-08 07:43:47,415 | INFO     | exitcode: 0
[2025-10-08 03:45:07] 2025-10-08 07:43:47,415 | INFO     | exitmsg: OK
[2025-10-08 03:45:07] 2025-10-08 07:43:47,415 | INFO     | cpuconsumptiontime: 29122 s
[2025-10-08 03:45:07] 2025-10-08 07:43:47,415 | INFO     | nevents: 400
[2025-10-08 03:45:07] 2025-10-08 07:43:47,415 | INFO     | neventsw: 0
[2025-10-08 03:45:07] 2025-10-08 07:43:47,415 | INFO     | pid: 2244060
[2025-10-08 03:45:07] 2025-10-08 07:43:47,415 | INFO     | pgrp: 2244060
[2025-10-08 03:45:07] 2025-10-08 07:43:47,416 | INFO     | corecount: 8
[2025-10-08 03:45:07] 2025-10-08 07:43:47,416 | INFO     | event service: False
[2025-10-08 03:45:07] 2025-10-08 07:43:47,416 | INFO     | sizes: {0: 2348820, 5: 2349082, 11: 2349138, 6378: 2376363, 6380: 2376362, 6385: 2385416, 6386: 2385600, 6422: 2385794}
[2025-10-08 03:45:07] 2025-10-08 07:43:47,416 | INFO     | --------------------------------------------------
[2025-10-08 03:45:07] 2025-10-08 07:43:47,416 | INFO     | 
[2025-10-08 03:45:07] 2025-10-08 07:43:47,416 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-08 03:45:07] 2025-10-08 07:43:47,682 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-08 03:45:07] 2025-10-08 07:43:47,683 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-08 03:45:07] 2025-10-08 07:43:47,683 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-08 03:45:07] 2025-10-08 07:43:47,683 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-08 03:45:07] 2025-10-08 07:43:47,683 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-08 03:45:07] 2025-10-08 07:43:47,683 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-08 03:45:07] 2025-10-08 07:43:47,683 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-08 03:45:07] 2025-10-08 07:43:47,683 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-08 03:45:07] 2025-10-08 07:43:47,683 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-08 03:45:07] 2025-10-08 07:43:47,683 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-08 03:45:07] 2025-10-08 07:43:47,683 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-08 03:45:07] 2025-10-08 07:43:47,683 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-08 03:45:07] 2025-10-08 07:43:47,683 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-08 03:45:07] 2025-10-08 07:43:47,683 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-08 03:45:07] 2025-10-08 07:43:47,684 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-08 03:45:07] 2025-10-08 07:43:47,684 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-08 03:45:07] 2025-10-08 07:43:47,684 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-08 03:45:07] 2025-10-08 07:43:47,684 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-08 03:45:07] 2025-10-08 07:43:47,684 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-08 03:45:07] 2025-10-08 07:43:47,684 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-08 03:45:07] 2025-10-08 07:43:47,684 | INFO     | job 6833156777 has completed (purged errors)
[2025-10-08 03:45:07] 2025-10-08 07:43:47,684 | INFO     | overall cleanup function is called
[2025-10-08 03:45:07] 2025-10-08 07:43:48,727 | INFO     | --- collectZombieJob: --- 10, [2244060]
[2025-10-08 03:45:07] 2025-10-08 07:43:48,727 | INFO     | zombie collector waiting for pid 2244060
[2025-10-08 03:45:07] 2025-10-08 07:43:48,727 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-08 03:45:07] 2025-10-08 07:43:48,728 | INFO     | collected zombie processes
[2025-10-08 03:45:07] 2025-10-08 07:43:48,728 | INFO     | will attempt to kill all subprocesses of pid=2244060
[2025-10-08 03:45:07] 2025-10-08 07:43:50,456 | INFO     | process IDs to be killed: [2244060] (in reverse order)
[2025-10-08 03:45:07] 2025-10-08 07:43:50,882 | WARNING  | found no corresponding commands to process id(s)
[2025-10-08 03:45:07] 2025-10-08 07:43:50,882 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-08 03:45:07] 2025-10-08 07:43:51,020 | INFO     | did not find any defunct processes belonging to 2244060
[2025-10-08 03:45:07] 2025-10-08 07:43:51,138 | INFO     | did not find any defunct processes belonging to 2244060
[2025-10-08 03:45:07] 2025-10-08 07:43:51,138 | INFO     | ready for new job
[2025-10-08 03:45:07] 2025-10-08 07:43:51,138 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-08 03:45:07] 2025-10-08 07:43:51,139 | INFO     | ***************************************
[2025-10-08 03:45:07] 2025-10-08 07:43:51,140 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-08 03:45:07] 2025-10-08 07:43:51,140 | INFO     | ***************************************
[2025-10-08 03:45:07] 2025-10-08 07:43:51,140 | INFO     | 
[2025-10-08 03:45:07] 2025-10-08 07:43:51,174 | INFO     | architecture information:
[2025-10-08 03:45:07] 2025-10-08 07:43:51,196 | INFO     | executing command: cat /etc/os-release
[2025-10-08 03:45:07] 2025-10-08 07:43:51,429 | INFO     | cat /etc/os-release:
[2025-10-08 03:45:07] NAME="CentOS Linux"
[2025-10-08 03:45:07] VERSION="7 (Core)"
[2025-10-08 03:45:07] ID="centos"
[2025-10-08 03:45:07] ID_LIKE="rhel fedora"
[2025-10-08 03:45:07] VERSION_ID="7"
[2025-10-08 03:45:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-08 03:45:07] ANSI_COLOR="0;31"
[2025-10-08 03:45:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-08 03:45:07] HOME_URL="https://www.centos.org/"
[2025-10-08 03:45:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-08 03:45:07] 
[2025-10-08 03:45:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-08 03:45:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-08 03:45:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-08 03:45:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-08 03:45:07] 
[2025-10-08 03:45:07] 2025-10-08 07:43:51,430 | INFO     | ***************************************
[2025-10-08 03:45:07] 2025-10-08 07:43:51,943 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-08 03:45:07] 2025-10-08 07:43:52,233 | INFO     | sufficient remaining disk space (84751155200 B)
[2025-10-08 03:45:07] 2025-10-08 07:43:52,234 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-08 03:45:07] 2025-10-08 07:43:52,234 | INFO     | current server update state: UPDATING_FINAL
[2025-10-08 03:45:07] 2025-10-08 07:43:52,234 | INFO     | update_server=False
[2025-10-08 03:45:07] 2025-10-08 07:43:52,234 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-08 03:45:07] 2025-10-08 07:43:52,234 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-08 03:45:07] 2025-10-08 07:43:52,237 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-08 03:45:07] 2025-10-08 07:43:52,279 | INFO     | all data control threads have been joined
[2025-10-08 03:45:07] 2025-10-08 07:43:52,862 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-08 03:45:07] 2025-10-08 07:43:52,862 | INFO     | aborting loop
[2025-10-08 03:45:07] 2025-10-08 07:43:53,240 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-08 03:45:07] 2025-10-08 07:43:53,261 | INFO     | [job] retrieve thread has finished
[2025-10-08 03:45:07] 2025-10-08 07:43:53,263 | INFO     | [job] queue monitor thread has finished
[2025-10-08 03:45:07] 2025-10-08 07:43:53,285 | INFO     | [data] control thread has finished
[2025-10-08 03:45:07] 2025-10-08 07:43:53,686 | INFO     | all job control threads have been joined
[2025-10-08 03:45:07] 2025-10-08 07:43:53,695 | INFO     | all payload control threads have been joined
[2025-10-08 03:45:07] 2025-10-08 07:43:53,870 | INFO     | [job] job monitor thread has finished
[2025-10-08 03:45:07] 2025-10-08 07:43:54,061 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-08 03:45:07] 2025-10-08 07:43:54,062 | INFO     | [job] validate thread has finished
[2025-10-08 03:45:07] 2025-10-08 07:43:54,062 | INFO     | [data] copytool_in thread has finished
[2025-10-08 03:45:07] 2025-10-08 07:43:54,062 | INFO     | [payload] validate_pre thread has finished
[2025-10-08 03:45:07] 2025-10-08 07:43:54,244 | INFO     | [data] copytool_out thread has finished
[2025-10-08 03:45:07] 2025-10-08 07:43:54,391 | INFO     | [job] create_data_payload thread has finished
[2025-10-08 03:45:07] 2025-10-08 07:43:54,591 | INFO     | [payload] execute_payloads thread has finished
[2025-10-08 03:45:07] 2025-10-08 07:43:54,678 | INFO     | [payload] validate_post thread has finished
[2025-10-08 03:45:07] 2025-10-08 07:43:54,679 | INFO     | [payload] failed_post thread has finished
[2025-10-08 03:45:07] 2025-10-08 07:43:54,691 | INFO     | [job] control thread has finished
[2025-10-08 03:45:07] 2025-10-08 07:43:54,701 | INFO     | [payload] control thread has finished
[2025-10-08 03:45:07] 2025-10-08 07:43:57,256 | INFO     | [data] queue_monitor thread has finished
[2025-10-08 03:45:07] 2025-10-08 07:44:20,992 | INFO     | PID=2226808 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-08 03:45:07] 2025-10-08 07:44:20,994 | INFO     | .. there are 19 such processes running
[2025-10-08 03:45:07] 2025-10-08 07:44:20,994 | INFO     | found 0 job(s) in 20 queues
[2025-10-08 03:45:07] 2025-10-08 07:44:20,994 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-08 03:45:07] 2025-10-08 07:44:20,994 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-08 03:45:07] 2025-10-08 07:44:39,281 | INFO     | [monitor] cgroup control has ended
[2025-10-08 03:45:07] 2025-10-08 07:44:40,287 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140650567640896)>', '<ExcThread(monitor, started 140650221651712)>']
[2025-10-08 03:45:07] 2025-10-08 07:44:41,199 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-08 03:45:07] 2025-10-08 07:44:41,199 | INFO     | [monitor] control thread has ended
[2025-10-08 03:45:07] 2025-10-08 07:44:45,338 | INFO     | all workflow threads have been joined
[2025-10-08 03:45:07] 2025-10-08 07:44:45,339 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-08 03:45:07] 2025-10-08 07:44:45,339 | INFO     | traces error code: 0
[2025-10-08 03:45:07] 2025-10-08 07:44:45,339 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-08 03:45:07] 2025-10-08 07:44:46,730 [wrapper] ==== pilot stdout END ====
[2025-10-08 03:45:07] 2025-10-08 07:44:46,778 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-08 03:45:07] 2025-10-08 07:44:46,808 [wrapper] pilotpid: 2226808
[2025-10-08 03:45:07] 2025-10-08 07:44:46,846 [wrapper] Pilot exit status: 0
[2025-10-08 03:45:07] 2025-10-08 07:44:47,107 [wrapper] pandaids: 6833156777
[2025-10-08 03:45:07] 2025-10-08 07:44:47,465 [wrapper] cleanup supervisor_pilot 2735571 2226809
[2025-10-08 03:45:07] 2025-10-08 07:44:47,507 [wrapper] Test setup, not cleaning
[2025-10-08 03:45:07] 2025-10-08 07:44:47,545 [wrapper] apfmon messages muted
[2025-10-08 03:45:07] 2025-10-08 07:44:47,589 [wrapper] ==== wrapper stdout END ====
[2025-10-08 03:45:07] 2025-10-08 07:44:47,739 [wrapper] ==== wrapper stderr END ====
[2025-10-08 03:45:07]  *** Error codes and diagnostics ***
[2025-10-08 03:45:07]     "exeErrorCode": 0,
[2025-10-08 03:45:07]     "exeErrorDiag": "",
[2025-10-08 03:45:07]     "pilotErrorCode": 0,
[2025-10-08 03:45:07]     "pilotErrorDiag": "",
[2025-10-08 03:45:07]  *** Listing of results directory ***
[2025-10-08 03:45:07] total 389580
[2025-10-08 03:45:07] -rwx------. 1 boincer umatlas     36292 Oct  6 20:02 runpilot2-wrapper.sh
[2025-10-08 03:45:07] -rw-r--r--. 1 boincer umatlas    552446 Oct  6 20:02 pilot3.tar.gz
[2025-10-08 03:45:07] -rw-r--r--. 1 boincer umatlas      5112 Oct  6 20:02 queuedata.json
[2025-10-08 03:45:07] -rw-r--r--. 1 boincer umatlas       100 Oct  8 01:56 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-08 03:45:07] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  8 01:56 run_atlas
[2025-10-08 03:45:07] -rw-r--r--. 1 boincer umatlas       105 Oct  8 01:56 job.xml
[2025-10-08 03:45:07] -rw-r--r--. 2 boincer umatlas 214348115 Oct  8 01:56 EVNT.46376901._004569.pool.root.1
[2025-10-08 03:45:07] -rw-r--r--. 2 boincer umatlas     15120 Oct  8 01:56 start_atlas.sh
[2025-10-08 03:45:07] drwxrwx--x. 2 boincer umatlas      4096 Oct  8 01:56 shared
[2025-10-08 03:45:07] -rw-r--r--. 2 boincer umatlas    565593 Oct  8 01:56 input.tar.gz
[2025-10-08 03:45:07] -rw-r--r--. 1 boincer umatlas         0 Oct  8 01:56 boinc_lockfile
[2025-10-08 03:45:07] -rw-r--r--. 1 boincer umatlas      2521 Oct  8 01:56 pandaJob.out
[2025-10-08 03:45:07] -rw-------. 1 boincer umatlas    979841 Oct  8 01:56 agis_schedconf.cvmfs.json
[2025-10-08 03:45:07] -rw-------. 1 boincer umatlas   1560401 Oct  8 01:56 agis_ddmendpoints.agis.ALL.json
[2025-10-08 03:45:07] drwx------. 4 boincer umatlas      4096 Oct  8 01:56 pilot3
[2025-10-08 03:45:07] -rw-------. 1 boincer umatlas 178224307 Oct  8 03:40 HITS.46376905._123163.pool.root.1
[2025-10-08 03:45:07] -rw-r--r--. 1 boincer umatlas       529 Oct  8 03:40 boinc_task_state.xml
[2025-10-08 03:45:07] -rw-r--r--. 1 boincer umatlas      6896 Oct  8 03:40 init_data.xml
[2025-10-08 03:45:07] -rw-------. 1 boincer umatlas      1032 Oct  8 03:42 memory_monitor_summary.json
[2025-10-08 03:45:07] -rw-------. 1 boincer umatlas    349334 Oct  8 03:43 log.46376905._123163.job.log.tgz.1
[2025-10-08 03:45:07] -rw-------. 1 boincer umatlas        95 Oct  8 03:43 pilot_heartbeat.json
[2025-10-08 03:45:07] -rw-------. 1 boincer umatlas      7780 Oct  8 03:43 heartbeat.json
[2025-10-08 03:45:07] -rw-------. 1 boincer umatlas      4824 Oct  8 03:44 pilotlog.txt
[2025-10-08 03:45:07] -rw-------. 1 boincer umatlas    882877 Oct  8 03:44 log.46376905._123163.job.log.1
[2025-10-08 03:45:07] -rw-------. 1 boincer umatlas       357 Oct  8 03:44 output.list
[2025-10-08 03:45:07] -rw-r--r--. 1 boincer umatlas       620 Oct  8 03:44 runtime_log
[2025-10-08 03:45:07] -rw-------. 1 boincer umatlas   1249280 Oct  8 03:44 result.tar.gz
[2025-10-08 03:45:07] -rw-r--r--. 1 boincer umatlas      8703 Oct  8 03:44 runtime_log.err
[2025-10-08 03:45:07] -rw-------. 1 boincer umatlas       653 Oct  8 03:44 coDODmCLAQ8n9Rq4apOajLDm4fhM0noT9bVof3QYDmwTKMDmwob8Um.diag
[2025-10-08 03:45:07] -rw-r--r--. 1 boincer umatlas      8192 Oct  8 03:45 boinc_mmap_file
[2025-10-08 03:45:07] -rw-r--r--. 1 boincer umatlas        27 Oct  8 03:45 wrapper_checkpoint.txt
[2025-10-08 03:45:07] -rw-r--r--. 1 boincer umatlas     20963 Oct  8 03:45 stderr.txt
[2025-10-08 03:45:08] HITS file was successfully produced:
[2025-10-08 03:45:08] -rw-------. 1 boincer umatlas 178224307 Oct  8 03:40 shared/HITS.pool.root.1
[2025-10-08 03:45:08]  *** Contents of shared directory: ***
[2025-10-08 03:45:08] total 385176
[2025-10-08 03:45:08] -rw-r--r--. 2 boincer umatlas 214348115 Oct  8 01:56 ATLAS.root_0
[2025-10-08 03:45:08] -rw-r--r--. 2 boincer umatlas     15120 Oct  8 01:56 start_atlas.sh
[2025-10-08 03:45:08] -rw-r--r--. 2 boincer umatlas    565593 Oct  8 01:56 input.tar.gz
[2025-10-08 03:45:08] -rw-------. 1 boincer umatlas 178224307 Oct  8 03:40 HITS.pool.root.1
[2025-10-08 03:45:08] -rw-------. 1 boincer umatlas   1249280 Oct  8 03:44 result.tar.gz
03:45:09 (2223113): run_atlas exited; CPU time 29214.342483
03:45:09 (2223113): called boinc_finish(0)

</stderr_txt>
]]>

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