Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
01:37:45 (18094): wrapper (7.7.26015): starting
01:37:45 (18094): wrapper: running run_atlas (--nthreads 12)
[2025-10-08 01:37:45] Arguments: --nthreads 12
[2025-10-08 01:37:45] Threads: 12
[2025-10-08 01:37:45] Checking for CVMFS
[2025-10-08 01:37:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 01:37:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 01:37:45] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 01:37:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 01:37:46] 2.11.2.0 3297 216665 95452 151459 1 1 18673082 20275201 1 130560 2 103741464 99.984 12767980 12163 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-08 01:37:46] CVMFS is ok
[2025-10-08 01:37:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-08 01:37:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-08 01:37:46] Further information can be found at the LHC@home message board.
[2025-10-08 01:37:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 01:37:46] Checking for apptainer binary...
[2025-10-08 01:37:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 01:37:46] Running /usr/bin/apptainer --version
[2025-10-08 01:37:46] apptainer version 1.3.2-1.el7
[2025-10-08 01:37:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 01:37:47] c-205-22.aglt2.org
[2025-10-08 01:37:47] apptainer works
[2025-10-08 01:37:47] Set ATHENA_PROC_NUMBER=12
[2025-10-08 01:37:47] Set ATHENA_CORE_NUMBER=12
[2025-10-08 01:37:47] Starting ATLAS job with PandaID=6829689708
[2025-10-08 01:37:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-08 02:43:16]  *** The last 200 lines of the pilot log: ***
[2025-10-08 02:43:16]  storage_token=
[2025-10-08 02:43:16]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6829689708/log.46376905._061091.job.log.tgz.1
[2025-10-08 02:43:16]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a7/55/log.46376905._061091.job.log.tgz.1
[2025-10-08 02:43:16]  workdir=None
[2025-10-08 02:43:16] ]
[2025-10-08 02:43:16] 2025-10-08 06:42:32,272 | INFO     | transferring file log.46376905._061091.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6829689708/log.46376905._061091.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-08 02:43:16] 2025-10-08 06:42:32,273 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6829689708/log.46376905._061091.job.log.tgz.1 /tmp/boinchome/slots/0/log.46376905._061091.job
[2025-10-08 02:43:16] 2025-10-08 06:42:32,295 | INFO     | adding to output.list: log.46376905._061091.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/a7/55/log.46376905._061091.job.log.tg
[2025-10-08 02:43:16] 2025-10-08 06:42:32,296 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-08 02:43:16] 2025-10-08 06:42:32,296 | INFO     | summary of transferred files:
[2025-10-08 02:43:16] 2025-10-08 06:42:32,296 | INFO     |  -- lfn=log.46376905._061091.job.log.tgz.1, status_code=0, status=transferred
[2025-10-08 02:43:16] 2025-10-08 06:42:32,297 | INFO     | stage-out finished correctly
[2025-10-08 02:43:16] 2025-10-08 06:42:32,684 | INFO     | monitor loop #290: job 0:6829689708 is in state 'finished'
[2025-10-08 02:43:16] 2025-10-08 06:42:32,684 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 02:43:16] 2025-10-08 06:42:33,918 | INFO     | time since job start (3871s) is within the limit (172800.0s)
[2025-10-08 02:43:16] 2025-10-08 06:42:34,250 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-08 02:43:16] 2025-10-08 06:42:35,188 | INFO     | monitor loop #291: job 0:6829689708 is in state 'finished'
[2025-10-08 02:43:16] 2025-10-08 06:42:35,188 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 02:43:16] 2025-10-08 06:42:35,832 | INFO     | job 6829689708 has state=finished
[2025-10-08 02:43:16] 2025-10-08 06:42:35,833 | INFO     | preparing for final server update for job 6829689708 in state='finished'
[2025-10-08 02:43:16] 2025-10-08 06:42:35,833 | INFO     | this job has now completed (state=finished)
[2025-10-08 02:43:16] 2025-10-08 06:42:35,833 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-08 02:43:16] 2025-10-08 06:42:35,834 | INFO     | log transfer has been attempted: DONE
[2025-10-08 02:43:16] 2025-10-08 06:42:35,834 | INFO     | job 6829689708 has finished - writing final server update
[2025-10-08 02:43:16] 2025-10-08 06:42:35,834 | INFO     | total number of processed events: 400 (read)
[2025-10-08 02:43:16] 2025-10-08 06:42:35,835 | INFO     | executing command: lscpu
[2025-10-08 02:43:16] 2025-10-08 06:42:35,862 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-08 02:43:16] 2025-10-08 06:42:35,924 | INFO     | time since job start (3873s) is within the limit (172800.0s)
[2025-10-08 02:43:16] 2025-10-08 06:42:37,691 | INFO     | monitor loop #292: job 0:6829689708 is in state 'finished'
[2025-10-08 02:43:16] 2025-10-08 06:42:37,691 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 02:43:16] 2025-10-08 06:42:37,929 | INFO     | time since job start (3875s) is within the limit (172800.0s)
[2025-10-08 02:43:16] 2025-10-08 06:42:39,935 | INFO     | time since job start (3877s) is within the limit (172800.0s)
[2025-10-08 02:43:16] 2025-10-08 06:42:40,194 | INFO     | monitor loop #293: job 0:6829689708 is in state 'finished'
[2025-10-08 02:43:16] 2025-10-08 06:42:40,194 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 02:43:16] 2025-10-08 06:42:40,509 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-08 02:43:16] 2025-10-08 06:42:40,514 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-10-08 02:43:16] 2025-10-08 06:42:40,516 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6829689708/memory_monitor_summary.json (trf name=prmon)
[2025-10-08 02:43:16] 2025-10-08 06:42:40,517 | INFO     | extracted standard info from prmon json
[2025-10-08 02:43:16] 2025-10-08 06:42:40,517 | INFO     | extracted standard memory fields from prmon json
[2025-10-08 02:43:16] 2025-10-08 06:42:40,517 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-08 02:43:16] 2025-10-08 06:42:40,517 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-08 02:43:16] 2025-10-08 06:42:40,518 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-08 02:43:16] 2025-10-08 06:42:40,519 | INFO     | fitting pss+swap vs Time
[2025-10-08 02:43:16] 2025-10-08 06:42:40,519 | INFO     | sum of square deviations: 54438230.0
[2025-10-08 02:43:16] 2025-10-08 06:42:40,519 | INFO     | sum of deviations: -6105650674.000001
[2025-10-08 02:43:16] 2025-10-08 06:42:40,520 | INFO     | mean x: 1759903893.5
[2025-10-08 02:43:16] 2025-10-08 06:42:40,520 | INFO     | mean y: 2799506.9285714286
[2025-10-08 02:43:16] 2025-10-08 06:42:40,520 | INFO     | -- intersect: 197389055333.45895
[2025-10-08 02:43:16] 2025-10-08 06:42:40,520 | INFO     | intersect: 197389055333.45895
[2025-10-08 02:43:16] 2025-10-08 06:42:40,520 | INFO     | chi2: 0.043896976117774364
[2025-10-08 02:43:16] 2025-10-08 06:42:40,520 | INFO     | -- intersect: 197389055333.45895
[2025-10-08 02:43:16] 2025-10-08 06:42:40,520 | INFO     | current memory leak: -112.16 B/s (using 56 data points, chi2=0.04)
[2025-10-08 02:43:16] 2025-10-08 06:42:40,521 | INFO     | could have reported an average CPU frequency of 2036 MHz (6 samples)
[2025-10-08 02:43:16] 2025-10-08 06:42:40,521 | INFO     | ..............................
[2025-10-08 02:43:16] 2025-10-08 06:42:40,521 | INFO     | . Timing measurements:
[2025-10-08 02:43:16] 2025-10-08 06:42:40,521 | INFO     | . get job = 0 s
[2025-10-08 02:43:16] 2025-10-08 06:42:40,521 | INFO     | . initial setup = 2 s
[2025-10-08 02:43:16] 2025-10-08 06:42:40,521 | INFO     | . payload setup = 7 s
[2025-10-08 02:43:16] 2025-10-08 06:42:40,521 | INFO     | . stage-in = 0 s
[2025-10-08 02:43:16] 2025-10-08 06:42:40,521 | INFO     | . payload execution = 3840 s
[2025-10-08 02:43:16] 2025-10-08 06:42:40,522 | INFO     | . stage-out = 0 s
[2025-10-08 02:43:16] 2025-10-08 06:42:40,522 | INFO     | . log creation = 0 s
[2025-10-08 02:43:16] 2025-10-08 06:42:40,522 | INFO     | ..............................
[2025-10-08 02:43:16] 2025-10-08 06:42:40,603 | INFO     | 
[2025-10-08 02:43:16] 2025-10-08 06:42:40,603 | INFO     | job summary report
[2025-10-08 02:43:16] 2025-10-08 06:42:40,603 | INFO     | --------------------------------------------------
[2025-10-08 02:43:16] 2025-10-08 06:42:40,604 | INFO     | PanDA job id: 6829689708
[2025-10-08 02:43:16] 2025-10-08 06:42:40,604 | INFO     | task id: 46376905
[2025-10-08 02:43:16] 2025-10-08 06:42:40,604 | INFO     | errors: (none)
[2025-10-08 02:43:16] 2025-10-08 06:42:40,604 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-08 02:43:16] 2025-10-08 06:42:40,604 | INFO     | pilot state: finished 
[2025-10-08 02:43:16] 2025-10-08 06:42:40,604 | INFO     | transexitcode: 0
[2025-10-08 02:43:16] 2025-10-08 06:42:40,605 | INFO     | exeerrorcode: 0
[2025-10-08 02:43:16] 2025-10-08 06:42:40,605 | INFO     | exeerrordiag: 
[2025-10-08 02:43:16] 2025-10-08 06:42:40,605 | INFO     | exitcode: 0
[2025-10-08 02:43:16] 2025-10-08 06:42:40,605 | INFO     | exitmsg: OK
[2025-10-08 02:43:16] 2025-10-08 06:42:40,605 | INFO     | cpuconsumptiontime: 40914 s
[2025-10-08 02:43:16] 2025-10-08 06:42:40,605 | INFO     | nevents: 400
[2025-10-08 02:43:16] 2025-10-08 06:42:40,606 | INFO     | neventsw: 0
[2025-10-08 02:43:16] 2025-10-08 06:42:40,606 | INFO     | pid: 29946
[2025-10-08 02:43:16] 2025-10-08 06:42:40,606 | INFO     | pgrp: 29946
[2025-10-08 02:43:16] 2025-10-08 06:42:40,606 | INFO     | corecount: 12
[2025-10-08 02:43:16] 2025-10-08 06:42:40,606 | INFO     | event service: False
[2025-10-08 02:43:16] 2025-10-08 06:42:40,606 | INFO     | sizes: {0: 2348701, 1: 2348843, 5: 2349105, 11: 2349161, 3851: 2374974, 3852: 2374973, 3853: 2384155, 3855: 2384211, 3862: 2384405}
[2025-10-08 02:43:16] 2025-10-08 06:42:40,606 | INFO     | --------------------------------------------------
[2025-10-08 02:43:16] 2025-10-08 06:42:40,606 | INFO     | 
[2025-10-08 02:43:16] 2025-10-08 06:42:40,606 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-08 02:43:16] 2025-10-08 06:42:40,631 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-08 02:43:16] 2025-10-08 06:42:40,631 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-08 02:43:16] 2025-10-08 06:42:40,631 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-08 02:43:16] 2025-10-08 06:42:40,631 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-08 02:43:16] 2025-10-08 06:42:40,631 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-08 02:43:16] 2025-10-08 06:42:40,632 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-08 02:43:16] 2025-10-08 06:42:40,632 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-08 02:43:16] 2025-10-08 06:42:40,632 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-08 02:43:16] 2025-10-08 06:42:40,632 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-08 02:43:16] 2025-10-08 06:42:40,632 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-08 02:43:16] 2025-10-08 06:42:40,632 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-08 02:43:16] 2025-10-08 06:42:40,633 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-08 02:43:16] 2025-10-08 06:42:40,633 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-08 02:43:16] 2025-10-08 06:42:40,633 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-08 02:43:16] 2025-10-08 06:42:40,633 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-08 02:43:16] 2025-10-08 06:42:40,633 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-08 02:43:16] 2025-10-08 06:42:40,633 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-08 02:43:16] 2025-10-08 06:42:40,634 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-08 02:43:16] 2025-10-08 06:42:40,634 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-08 02:43:16] 2025-10-08 06:42:40,634 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-08 02:43:16] 2025-10-08 06:42:40,634 | INFO     | job 6829689708 has completed (purged errors)
[2025-10-08 02:43:16] 2025-10-08 06:42:40,634 | INFO     | overall cleanup function is called
[2025-10-08 02:43:16] 2025-10-08 06:42:41,642 | INFO     | --- collectZombieJob: --- 10, [29946]
[2025-10-08 02:43:16] 2025-10-08 06:42:41,643 | INFO     | zombie collector waiting for pid 29946
[2025-10-08 02:43:16] 2025-10-08 06:42:41,643 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-08 02:43:16] 2025-10-08 06:42:41,643 | INFO     | collected zombie processes
[2025-10-08 02:43:16] 2025-10-08 06:42:41,643 | INFO     | will attempt to kill all subprocesses of pid=29946
[2025-10-08 02:43:16] 2025-10-08 06:42:41,732 | INFO     | process IDs to be killed: [29946] (in reverse order)
[2025-10-08 02:43:16] 2025-10-08 06:42:41,784 | WARNING  | found no corresponding commands to process id(s)
[2025-10-08 02:43:16] 2025-10-08 06:42:41,784 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-08 02:43:16] 2025-10-08 06:42:41,787 | INFO     | did not find any defunct processes belonging to 29946
[2025-10-08 02:43:16] 2025-10-08 06:42:41,789 | INFO     | did not find any defunct processes belonging to 29946
[2025-10-08 02:43:16] 2025-10-08 06:42:41,790 | INFO     | ready for new job
[2025-10-08 02:43:16] 2025-10-08 06:42:41,790 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-08 02:43:16] 2025-10-08 06:42:41,791 | INFO     | ***************************************
[2025-10-08 02:43:16] 2025-10-08 06:42:41,791 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-08 02:43:16] 2025-10-08 06:42:41,791 | INFO     | ***************************************
[2025-10-08 02:43:16] 2025-10-08 06:42:41,791 | INFO     | 
[2025-10-08 02:43:16] 2025-10-08 06:42:41,792 | INFO     | architecture information:
[2025-10-08 02:43:16] 2025-10-08 06:42:41,792 | INFO     | executing command: cat /etc/os-release
[2025-10-08 02:43:16] 2025-10-08 06:42:41,807 | INFO     | cat /etc/os-release:
[2025-10-08 02:43:16] NAME="CentOS Linux"
[2025-10-08 02:43:16] VERSION="7 (Core)"
[2025-10-08 02:43:16] ID="centos"
[2025-10-08 02:43:16] ID_LIKE="rhel fedora"
[2025-10-08 02:43:16] VERSION_ID="7"
[2025-10-08 02:43:16] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-08 02:43:16] ANSI_COLOR="0;31"
[2025-10-08 02:43:16] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-08 02:43:16] HOME_URL="https://www.centos.org/"
[2025-10-08 02:43:16] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-08 02:43:16] 
[2025-10-08 02:43:16] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-08 02:43:16] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-08 02:43:16] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-08 02:43:16] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-08 02:43:16] 
[2025-10-08 02:43:16] 2025-10-08 06:42:41,807 | INFO     | ***************************************
[2025-10-08 02:43:16] 2025-10-08 06:42:42,310 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-08 02:43:16] 2025-10-08 06:42:42,326 | INFO     | sufficient remaining disk space (29391585280 B)
[2025-10-08 02:43:16] 2025-10-08 06:42:42,326 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-08 02:43:16] 2025-10-08 06:42:42,326 | INFO     | current server update state: UPDATING_FINAL
[2025-10-08 02:43:16] 2025-10-08 06:42:42,327 | INFO     | update_server=False
[2025-10-08 02:43:16] 2025-10-08 06:42:42,327 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-08 02:43:16] 2025-10-08 06:42:42,327 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-08 02:43:16] 2025-10-08 06:42:42,576 | INFO     | all payload control threads have been joined
[2025-10-08 02:43:16] 2025-10-08 06:42:42,697 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-08 02:43:16] 2025-10-08 06:42:42,697 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-08 02:43:16] 2025-10-08 06:42:42,697 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-08 02:43:16] 2025-10-08 06:42:42,698 | INFO     | will abort loop
[2025-10-08 02:43:16] 2025-10-08 06:42:42,712 | INFO     | all data control threads have been joined
[2025-10-08 02:43:16] 2025-10-08 06:42:42,893 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-08 02:43:16] 2025-10-08 06:42:43,125 | INFO     | all job control threads have been joined
[2025-10-08 02:43:16] 2025-10-08 06:42:43,332 | INFO     | [job] retrieve thread has finished
[2025-10-08 02:43:16] 2025-10-08 06:42:43,333 | INFO     | [job] queue monitor thread has finished
[2025-10-08 02:43:16] 2025-10-08 06:42:43,581 | INFO     | [payload] control thread has finished
[2025-10-08 02:43:16] 2025-10-08 06:42:43,696 | INFO     | [payload] failed_post thread has finished
[2025-10-08 02:43:16] 2025-10-08 06:42:43,703 | INFO     | [job] job monitor thread has finished
[2025-10-08 02:43:16] 2025-10-08 06:42:43,718 | INFO     | [data] control thread has finished
[2025-10-08 02:43:16] 2025-10-08 06:42:44,086 | INFO     | [job] validate thread has finished
[2025-10-08 02:43:16] 2025-10-08 06:42:44,126 | INFO     | [job] control thread has finished
[2025-10-08 02:43:16] 2025-10-08 06:42:44,287 | INFO     | [payload] validate_post thread has finished
[2025-10-08 02:43:16] 2025-10-08 06:42:44,371 | INFO     | [job] create_data_payload thread has finished
[2025-10-08 02:43:16] 2025-10-08 06:42:44,688 | INFO     | [payload] execute_payloads thread has finished
[2025-10-08 02:43:16] 2025-10-08 06:42:44,688 | INFO     | [payload] validate_pre thread has finished
[2025-10-08 02:43:16] 2025-10-08 06:42:44,831 | INFO     | [data] copytool_in thread has finished
[2025-10-08 02:43:16] 2025-10-08 06:42:44,837 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-08 02:43:16] 2025-10-08 06:42:44,899 | INFO     | [data] copytool_out thread has finished
[2025-10-08 02:43:16] 2025-10-08 06:42:48,843 | INFO     | [data] queue_monitor thread has finished
[2025-10-08 02:43:16] 2025-10-08 06:42:53,142 | INFO     | job.realtimelogging is not enabled
[2025-10-08 02:43:16] 2025-10-08 06:42:54,147 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-08 02:43:16] 2025-10-08 06:43:08,629 | INFO     | [monitor] cgroup control has ended
[2025-10-08 02:43:16] 2025-10-08 06:43:10,739 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140154770777920)>', '<ExcThread(monitor, started 140153926424320)>']
[2025-10-08 02:43:16] 2025-10-08 06:43:13,126 | INFO     | PID=21795 has CPU usage=3.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-08 02:43:16] 2025-10-08 06:43:13,126 | INFO     | found 0 job(s) in 20 queues
[2025-10-08 02:43:16] 2025-10-08 06:43:13,126 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-08 02:43:16] 2025-10-08 06:43:13,126 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-08 02:43:16] 2025-10-08 06:43:13,127 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-08 02:43:16] 2025-10-08 06:43:13,127 | INFO     | [monitor] control thread has ended
[2025-10-08 02:43:16] 2025-10-08 06:43:15,742 | INFO     | all workflow threads have been joined
[2025-10-08 02:43:16] 2025-10-08 06:43:15,742 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-08 02:43:16] 2025-10-08 06:43:15,745 | INFO     | traces error code: 0
[2025-10-08 02:43:16] 2025-10-08 06:43:15,746 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-08 02:43:16] 2025-10-08 06:43:15,830 [wrapper] ==== pilot stdout END ====
[2025-10-08 02:43:16] 2025-10-08 06:43:15,834 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-08 02:43:16] 2025-10-08 06:43:15,837 [wrapper] pilotpid: 21795
[2025-10-08 02:43:16] 2025-10-08 06:43:15,841 [wrapper] Pilot exit status: 0
[2025-10-08 02:43:16] 2025-10-08 06:43:15,855 [wrapper] pandaids: 6829689708
[2025-10-08 02:43:16] 2025-10-08 06:43:15,894 [wrapper] cleanup supervisor_pilot  5262 21796
[2025-10-08 02:43:16] 2025-10-08 06:43:15,898 [wrapper] Test setup, not cleaning
[2025-10-08 02:43:16] 2025-10-08 06:43:15,902 [wrapper] apfmon messages muted
[2025-10-08 02:43:16] 2025-10-08 06:43:15,906 [wrapper] ==== wrapper stdout END ====
[2025-10-08 02:43:16] 2025-10-08 06:43:15,910 [wrapper] ==== wrapper stderr END ====
[2025-10-08 02:43:16]  *** Error codes and diagnostics ***
[2025-10-08 02:43:16]     "exeErrorCode": 0,
[2025-10-08 02:43:16]     "exeErrorDiag": "",
[2025-10-08 02:43:16]     "pilotErrorCode": 0,
[2025-10-08 02:43:16]     "pilotErrorDiag": "",
[2025-10-08 02:43:16]  *** Listing of results directory ***
[2025-10-08 02:43:16] total 388792
[2025-10-08 02:43:16] -rw-r--r-- 1 boincer umatlas    552446 Oct  4 09:04 pilot3.tar.gz
[2025-10-08 02:43:16] -rw-r--r-- 1 boincer umatlas      5112 Oct  4 09:42 queuedata.json
[2025-10-08 02:43:16] -rwx------ 1 boincer umatlas     36292 Oct  4 09:43 runpilot2-wrapper.sh
[2025-10-08 02:43:16] -rw-r--r-- 1 boincer umatlas       100 Oct  8 01:37 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-08 02:43:16] -rwxr-xr-x 1 boincer umatlas      7986 Oct  8 01:37 run_atlas
[2025-10-08 02:43:16] -rw-r--r-- 1 boincer umatlas       105 Oct  8 01:37 job.xml
[2025-10-08 02:43:16] -rw-r--r-- 2 boincer umatlas 214958390 Oct  8 01:37 EVNT.46376901._002202.pool.root.1
[2025-10-08 02:43:16] -rw-r--r-- 2 boincer umatlas     15120 Oct  8 01:37 start_atlas.sh
[2025-10-08 02:43:16] drwxrwx--x 2 boincer umatlas      4096 Oct  8 01:37 shared
[2025-10-08 02:43:16] -rw-r--r-- 2 boincer umatlas    565604 Oct  8 01:37 input.tar.gz
[2025-10-08 02:43:16] -rw-r--r-- 1 boincer umatlas         0 Oct  8 01:37 boinc_lockfile
[2025-10-08 02:43:16] -rw-r--r-- 1 boincer umatlas      2518 Oct  8 01:37 pandaJob.out
[2025-10-08 02:43:16] -rw------- 1 boincer umatlas    979841 Oct  8 01:38 agis_schedconf.cvmfs.json
[2025-10-08 02:43:16] -rw------- 1 boincer umatlas   1560401 Oct  8 01:38 agis_ddmendpoints.agis.ALL.json
[2025-10-08 02:43:16] drwx------ 4 boincer umatlas      4096 Oct  8 01:38 pilot3
[2025-10-08 02:43:16] -rw-r--r-- 1 boincer umatlas      5953 Oct  8 02:38 init_data.xml
[2025-10-08 02:43:16] -rw------- 1 boincer umatlas 177386370 Oct  8 02:42 HITS.46376905._061091.pool.root.1
[2025-10-08 02:43:16] -rw-r--r-- 1 boincer umatlas       529 Oct  8 02:42 boinc_task_state.xml
[2025-10-08 02:43:16] -rw------- 1 boincer umatlas      1048 Oct  8 02:42 memory_monitor_summary.json
[2025-10-08 02:43:16] -rw------- 1 boincer umatlas    370017 Oct  8 02:42 log.46376905._061091.job.log.tgz.1
[2025-10-08 02:43:16] -rw------- 1 boincer umatlas      7853 Oct  8 02:42 heartbeat.json
[2025-10-08 02:43:16] -rw-r--r-- 1 boincer umatlas      8192 Oct  8 02:42 boinc_mmap_file
[2025-10-08 02:43:16] -rw-r--r-- 1 boincer umatlas        27 Oct  8 02:42 wrapper_checkpoint.txt
[2025-10-08 02:43:16] -rw------- 1 boincer umatlas        95 Oct  8 02:43 pilot_heartbeat.json
[2025-10-08 02:43:16] -rw------- 1 boincer umatlas      5004 Oct  8 02:43 pilotlog.txt
[2025-10-08 02:43:16] -rw------- 1 boincer umatlas    569486 Oct  8 02:43 log.46376905._061091.job.log.1
[2025-10-08 02:43:16] -rw------- 1 boincer umatlas       357 Oct  8 02:43 output.list
[2025-10-08 02:43:16] -rw-r--r-- 1 boincer umatlas       620 Oct  8 02:43 runtime_log
[2025-10-08 02:43:16] -rw------- 1 boincer umatlas    962560 Oct  8 02:43 result.tar.gz
[2025-10-08 02:43:16] -rw-r--r-- 1 boincer umatlas      8705 Oct  8 02:43 runtime_log.err
[2025-10-08 02:43:16] -rw------- 1 boincer umatlas       659 Oct  8 02:43 Pz2KDmniHP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmgdLNDm1CEeKn.diag
[2025-10-08 02:43:16] -rw-r--r-- 1 boincer umatlas     22175 Oct  8 02:43 stderr.txt
[2025-10-08 02:43:16] HITS file was successfully produced:
[2025-10-08 02:43:16] -rw------- 1 boincer umatlas 177386370 Oct  8 02:42 shared/HITS.pool.root.1
[2025-10-08 02:43:16]  *** Contents of shared directory: ***
[2025-10-08 02:43:16] total 384672
[2025-10-08 02:43:16] -rw-r--r-- 2 boincer umatlas 214958390 Oct  8 01:37 ATLAS.root_0
[2025-10-08 02:43:16] -rw-r--r-- 2 boincer umatlas     15120 Oct  8 01:37 start_atlas.sh
[2025-10-08 02:43:16] -rw-r--r-- 2 boincer umatlas    565604 Oct  8 01:37 input.tar.gz
[2025-10-08 02:43:16] -rw------- 1 boincer umatlas 177386370 Oct  8 02:42 HITS.pool.root.1
[2025-10-08 02:43:16] -rw------- 1 boincer umatlas    962560 Oct  8 02:43 result.tar.gz
02:43:17 (18094): run_atlas exited; CPU time 40881.662777
02:43:17 (18094): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN