Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
07:54:46 (1785802): wrapper (7.7.26015): starting
07:54:46 (1785802): wrapper: running run_atlas (--nthreads 4)
[2025-10-08 07:54:46] Arguments: --nthreads 4
[2025-10-08 07:54:46] Threads: 4
[2025-10-08 07:54:46] Checking for CVMFS
[2025-10-08 07:54:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 07:54:46] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 07:54:46] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 07:54:46] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 07:54:46] 2.9.2.0 1735345 146 55564 151459 1 57 32891546 36864000 0 130560 0 130985 99.986 5400 668 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-08 07:54:46] CVMFS is ok
[2025-10-08 07:54:46] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-08 07:54:46] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-08 07:54:46] Further information can be found at the LHC@home message board.
[2025-10-08 07:54:46] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 07:54:46] Checking for apptainer binary...
[2025-10-08 07:54:46] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 07:54:46] Running /usr/bin/apptainer --version
[2025-10-08 07:54:46] apptainer version 1.4.1-1.1
[2025-10-08 07:54:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 07:54:46] magicA250
[2025-10-08 07:54:46] apptainer works
[2025-10-08 07:54:46] Set ATHENA_PROC_NUMBER=4
[2025-10-08 07:54:46] Set ATHENA_CORE_NUMBER=4
[2025-10-08 07:54:46] Starting ATLAS job with PandaID=6830913429
[2025-10-08 07:54:46] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-08 09:03:05]  *** The last 200 lines of the pilot log: ***
[2025-10-08 09:03:05] 2025-10-08 07:01:58,747 | INFO     | architecture information:
[2025-10-08 09:03:05] 2025-10-08 07:01:58,748 | INFO     | executing command: cat /etc/os-release
[2025-10-08 09:03:05] 2025-10-08 07:01:58,761 | INFO     | cat /etc/os-release:
[2025-10-08 09:03:05] NAME="CentOS Linux"
[2025-10-08 09:03:05] VERSION="7 (Core)"
[2025-10-08 09:03:05] ID="centos"
[2025-10-08 09:03:05] ID_LIKE="rhel fedora"
[2025-10-08 09:03:05] VERSION_ID="7"
[2025-10-08 09:03:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-08 09:03:05] ANSI_COLOR="0;31"
[2025-10-08 09:03:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-08 09:03:05] HOME_URL="https://www.centos.org/"
[2025-10-08 09:03:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-08 09:03:05] 
[2025-10-08 09:03:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-08 09:03:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-08 09:03:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-08 09:03:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-08 09:03:05] 
[2025-10-08 09:03:05] 2025-10-08 07:01:58,762 | INFO     | ***************************************
[2025-10-08 09:03:05] 2025-10-08 07:01:59,265 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-08 09:03:05] 2025-10-08 07:01:59,282 | INFO     | sufficient remaining disk space (328422391808 B)
[2025-10-08 09:03:05] 2025-10-08 07:01:59,283 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-08 09:03:05] 2025-10-08 07:01:59,283 | INFO     | current server update state: UPDATING_FINAL
[2025-10-08 09:03:05] 2025-10-08 07:01:59,283 | INFO     | update_server=False
[2025-10-08 09:03:05] 2025-10-08 07:01:59,283 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-08 09:03:05] 2025-10-08 07:01:59,283 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-08 09:03:05] 2025-10-08 07:01:59,283 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-08 09:03:05] 2025-10-08 07:01:59,539 | INFO     | all data control threads have been joined
[2025-10-08 09:03:05] 2025-10-08 07:01:59,689 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-08 09:03:05] 2025-10-08 07:01:59,899 | WARNING  | process 1796161 can no longer be monitored (due to stat problems) - aborting
[2025-10-08 09:03:05] 2025-10-08 07:01:59,933 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-10-08 09:03:05] 2025-10-08 07:01:59,933 | INFO     | using path: /local/data/boinc/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-10-08 09:03:05] 2025-10-08 07:01:59,934 | INFO     | skipping file size check of payload stdout file (/local/data/boinc/slots/0/PanDA_Pilot-6830913429/payload.stdout) since it has not been created yet
[2025-10-08 09:03:05] 2025-10-08 07:01:59,934 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-10-08 09:03:05] 2025-10-08 07:01:59,949 | INFO     | sufficient remaining disk space (328422391808 B)
[2025-10-08 09:03:05] 2025-10-08 07:01:59,949 | WARNING  | skipping size check of workdir since it has not been created yet
[2025-10-08 09:03:05] 2025-10-08 07:01:59,949 | INFO     | output file size check: skipping output file /local/data/boinc/slots/0/PanDA_Pilot-6830913429/HITS.46376905._076996.pool.root.1 since it does not exist
[2025-10-08 09:03:05] 2025-10-08 07:01:59,991 | INFO     | number of running child processes to parent process 1796161: 1
[2025-10-08 09:03:05] 2025-10-08 07:01:59,991 | INFO     | maximum number of monitored processes: 6
[2025-10-08 09:03:05] 2025-10-08 07:01:59,991 | INFO     | aborting job monitoring since job object (job id=6830913429) has expired
[2025-10-08 09:03:05] 2025-10-08 07:01:59,991 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-08 09:03:05] 2025-10-08 07:01:59,991 | INFO     | will abort loop
[2025-10-08 09:03:05] 2025-10-08 07:02:00,288 | INFO     | [job] queue monitor thread has finished
[2025-10-08 09:03:05] 2025-10-08 07:02:00,289 | INFO     | [job] retrieve thread has finished
[2025-10-08 09:03:05] 2025-10-08 07:02:00,385 | INFO     | [payload] validate_pre thread has finished
[2025-10-08 09:03:05] 2025-10-08 07:02:00,486 | INFO     | all job control threads have been joined
[2025-10-08 09:03:05] 2025-10-08 07:02:00,515 | INFO     | all payload control threads have been joined
[2025-10-08 09:03:05] 2025-10-08 07:02:00,545 | INFO     | [data] control thread has finished
[2025-10-08 09:03:05] 2025-10-08 07:02:00,662 | INFO     | [payload] validate_post thread has finished
[2025-10-08 09:03:05] 2025-10-08 07:02:00,856 | INFO     | [data] copytool_in thread has finished
[2025-10-08 09:03:05] 2025-10-08 07:02:00,997 | INFO     | [job] job monitor thread has finished
[2025-10-08 09:03:05] 2025-10-08 07:02:01,100 | INFO     | [payload] failed_post thread has finished
[2025-10-08 09:03:05] 2025-10-08 07:02:01,289 | INFO     | [data] copytool_out thread has finished
[2025-10-08 09:03:05] 2025-10-08 07:02:01,492 | INFO     | [job] control thread has finished
[2025-10-08 09:03:05] 2025-10-08 07:02:01,520 | INFO     | [payload] control thread has finished
[2025-10-08 09:03:05] 2025-10-08 07:02:01,592 | INFO     | [job] validate thread has finished
[2025-10-08 09:03:05] 2025-10-08 07:02:01,715 | INFO     | [job] create_data_payload thread has finished
[2025-10-08 09:03:05] 2025-10-08 07:02:01,719 | INFO     | [payload] execute_payloads thread has finished
[2025-10-08 09:03:05] 2025-10-08 07:02:03,697 | INFO     | [data] queue_monitor thread has finished
[2025-10-08 09:03:05] 2025-10-08 07:02:09,824 | INFO     | job.realtimelogging is not enabled
[2025-10-08 09:03:05] 2025-10-08 07:02:10,830 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-08 09:03:05] 2025-10-08 07:02:29,326 | INFO     | PID=1789583 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-08 09:03:05] 2025-10-08 07:02:29,327 | INFO     | found 0 job(s) in 20 queues
[2025-10-08 09:03:05] 2025-10-08 07:02:29,327 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-08 09:03:05] 2025-10-08 07:02:29,327 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-08 09:03:05] 2025-10-08 07:02:59,298 | INFO     | [monitor] cgroup control has ended
[2025-10-08 09:03:05] 2025-10-08 07:03:00,205 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140214916736832)>', '<ExcThread(monitor, started 140213879817984)>']
[2025-10-08 09:03:05] 2025-10-08 07:03:00,492 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-08 09:03:05] 2025-10-08 07:03:00,492 | INFO     | [monitor] control thread has ended
[2025-10-08 09:03:05] 2025-10-08 07:03:05,231 | INFO     | all workflow threads have been joined
[2025-10-08 09:03:05] 2025-10-08 07:03:05,231 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-08 09:03:05] 2025-10-08 07:03:05,231 | INFO     | traces error code: 0
[2025-10-08 09:03:05] 2025-10-08 07:03:05,231 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-08 09:03:05] 2025-10-08 07:03:05,313 [wrapper] ==== pilot stdout END ====
[2025-10-08 09:03:05] 2025-10-08 07:03:05,317 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-08 09:03:05] 2025-10-08 07:03:05,320 [wrapper] pilotpid: 1789583
[2025-10-08 09:03:05] 2025-10-08 07:03:05,325 [wrapper] Pilot exit status: 0
[2025-10-08 09:03:05] 2025-10-08 07:03:05,337 [wrapper] pandaids: 6830913429
[2025-10-08 09:03:05] 2025-10-08 07:03:05,360 [wrapper] cleanup supervisor_pilot 1805800 1789584
[2025-10-08 09:03:05] 2025-10-08 07:03:05,364 [wrapper] Test setup, not cleaning
[2025-10-08 09:03:05] 2025-10-08 07:03:05,368 [wrapper] apfmon messages muted
[2025-10-08 09:03:05] 2025-10-08 07:03:05,372 [wrapper] ==== wrapper stdout END ====
[2025-10-08 09:03:05] 2025-10-08 07:03:05,376 [wrapper] ==== wrapper stderr END ====
[2025-10-08 09:03:05]  *** Error codes and diagnostics ***
[2025-10-08 09:03:05]     "exeErrorCode": 0,
[2025-10-08 09:03:05]     "exeErrorDiag": "",
[2025-10-08 09:03:05]     "pilotErrorCode": 0,
[2025-10-08 09:03:05]     "pilotErrorDiag": "",
[2025-10-08 09:03:05]  *** Listing of results directory ***
[2025-10-08 09:03:05] total 399800
[2025-10-08 09:03:05] -rw-r--r-- 1 boinc boinc    552446 Oct  5 07:33 pilot3.tar.gz
[2025-10-08 09:03:05] -rwx------ 1 boinc boinc     36292 Oct  5 07:37 runpilot2-wrapper.sh
[2025-10-08 09:03:05] -rw-r--r-- 1 boinc boinc      5112 Oct  5 07:37 queuedata.json
[2025-10-08 09:03:05] -rw-r--r-- 1 boinc boinc       100 Oct  8 07:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-08 09:03:05] -rwxr-xr-x 1 boinc boinc      7986 Oct  8 07:54 run_atlas
[2025-10-08 09:03:05] -rw-r--r-- 1 boinc boinc       105 Oct  8 07:54 job.xml
[2025-10-08 09:03:05] -rw-r--r-- 2 boinc boinc 216529013 Oct  8 07:54 EVNT.46376901._002813.pool.root.1
[2025-10-08 09:03:05] -rw-r--r-- 2 boinc boinc    565606 Oct  8 07:54 input.tar.gz
[2025-10-08 09:03:05] -rw-r--r-- 2 boinc boinc     15120 Oct  8 07:54 start_atlas.sh
[2025-10-08 09:03:05] drwxrwx--x 2 boinc boinc      4096 Oct  8 07:54 shared
[2025-10-08 09:03:05] -rw-r--r-- 1 boinc boinc         0 Oct  8 07:54 boinc_setup_complete
[2025-10-08 09:03:05] -rw-r--r-- 1 boinc boinc      6378 Oct  8 07:54 init_data.xml
[2025-10-08 09:03:05] -rw-r--r-- 1 boinc boinc         0 Oct  8 07:54 boinc_lockfile
[2025-10-08 09:03:05] -rw-r--r-- 1 boinc boinc      2519 Oct  8 07:54 pandaJob.out
[2025-10-08 09:03:05] -rw------- 1 boinc boinc    979841 Oct  8 07:54 agis_schedconf.cvmfs.json
[2025-10-08 09:03:05] -rw------- 1 boinc boinc   1560401 Oct  8 07:54 agis_ddmendpoints.agis.ALL.json
[2025-10-08 09:03:05] drwx------ 4 boinc boinc      4096 Oct  8 07:54 pilot3
[2025-10-08 09:03:05] -rw------- 1 boinc boinc 187267198 Oct  8 09:01 HITS.46376905._076996.pool.root.1
[2025-10-08 09:03:05] -rw-r--r-- 1 boinc boinc       529 Oct  8 09:01 boinc_task_state.xml
[2025-10-08 09:03:05] -rw------- 1 boinc boinc      1024 Oct  8 09:01 memory_monitor_summary.json
[2025-10-08 09:03:05] -rw------- 1 boinc boinc    257689 Oct  8 09:01 log.46376905._076996.job.log.tgz.1
[2025-10-08 09:03:05] -rw------- 1 boinc boinc      7768 Oct  8 09:01 heartbeat.json
[2025-10-08 09:03:05] -rw------- 1 boinc boinc        95 Oct  8 09:02 pilot_heartbeat.json
[2025-10-08 09:03:05] -rw-r--r-- 1 boinc boinc      8192 Oct  8 09:02 boinc_mmap_file
[2025-10-08 09:03:05] -rw-r--r-- 1 boinc boinc        27 Oct  8 09:02 wrapper_checkpoint.txt
[2025-10-08 09:03:05] -rw------- 1 boinc boinc      6119 Oct  8 09:03 pilotlog.txt
[2025-10-08 09:03:05] -rw------- 1 boinc boinc    598601 Oct  8 09:03 log.46376905._076996.job.log.1
[2025-10-08 09:03:05] -rw------- 1 boinc boinc       357 Oct  8 09:03 output.list
[2025-10-08 09:03:05] -rw-r--r-- 1 boinc boinc       620 Oct  8 09:03 runtime_log
[2025-10-08 09:03:05] -rw------- 1 boinc boinc    880640 Oct  8 09:03 result.tar.gz
[2025-10-08 09:03:05] -rw-r--r-- 1 boinc boinc      8792 Oct  8 09:03 runtime_log.err
[2025-10-08 09:03:05] -rw------- 1 boinc boinc       661 Oct  8 09:03 PV8NDmTcWP8n9Rq4apOajLDm4fhM0noT9bVof3QYDmSOFMDm3i5DGn.diag
[2025-10-08 09:03:05] -rw-r--r-- 1 boinc boinc     10599 Oct  8 09:03 stderr.txt
[2025-10-08 09:03:05] HITS file was successfully produced:
[2025-10-08 09:03:05] -rw------- 1 boinc boinc 187267198 Oct  8 09:01 shared/HITS.pool.root.1
[2025-10-08 09:03:05]  *** Contents of shared directory: ***
[2025-10-08 09:03:05] total 395776
[2025-10-08 09:03:05] -rw-r--r-- 2 boinc boinc 216529013 Oct  8 07:54 ATLAS.root_0
[2025-10-08 09:03:05] -rw-r--r-- 2 boinc boinc    565606 Oct  8 07:54 input.tar.gz
[2025-10-08 09:03:05] -rw-r--r-- 2 boinc boinc     15120 Oct  8 07:54 start_atlas.sh
[2025-10-08 09:03:05] -rw------- 1 boinc boinc 187267198 Oct  8 09:01 HITS.pool.root.1
[2025-10-08 09:03:05] -rw------- 1 boinc boinc    880640 Oct  8 09:03 result.tar.gz
09:03:07 (1785802): run_atlas exited; CPU time 15008.031567
09:03:07 (1785802): called boinc_finish(0)

</stderr_txt>
]]>

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