Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:45:44 (29531): wrapper (7.7.26015): starting
00:45:44 (29531): wrapper: running run_atlas (--nthreads 4)
[2025-10-08 00:45:44] Arguments: --nthreads 4
[2025-10-08 00:45:44] Threads: 4
[2025-10-08 00:45:44] Checking for CVMFS
[2025-10-08 00:45:45] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 00:45:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 00:45:45] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 00:45:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 00:45:45] 2.11.2.0 2311 36421 66768 151458 0 56 14477854 20275201 1 130560 0 17567228 99.988 1167869 56055 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-08 00:45:45] CVMFS is ok
[2025-10-08 00:45:45] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-08 00:45:45] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-08 00:45:45] Further information can be found at the LHC@home message board.
[2025-10-08 00:45:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 00:45:45] Checking for apptainer binary...
[2025-10-08 00:45:45] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 00:45:45] Running /usr/bin/apptainer --version
[2025-10-08 00:45:45] apptainer version 1.3.2-1.el7
[2025-10-08 00:45:45] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 00:45:45] c-205-34.aglt2.org
[2025-10-08 00:45:45] apptainer works
[2025-10-08 00:45:45] Set ATHENA_PROC_NUMBER=4
[2025-10-08 00:45:45] Set ATHENA_CORE_NUMBER=4
[2025-10-08 00:45:45] Starting ATLAS job with PandaID=6832202831
[2025-10-08 00:45:45] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-08 02:10:09]  *** The last 200 lines of the pilot log: ***
[2025-10-08 02:10:09]  status_code=0
[2025-10-08 02:10:09]  storage_token=
[2025-10-08 02:10:09]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6832202831/log.46376905._101934.job.log.tgz.1
[2025-10-08 02:10:09]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6f/ed/log.46376905._101934.job.log.tgz.1
[2025-10-08 02:10:09]  workdir=None
[2025-10-08 02:10:09] ]
[2025-10-08 02:10:09] 2025-10-08 06:09:04,777 | INFO     | transferring file log.46376905._101934.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6832202831/log.46376905._101934.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-08 02:10:09] 2025-10-08 06:09:04,778 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6832202831/log.46376905._101934.job.log.tgz.1 /tmp/boinchome/slots/0/log.46376905._101934.job
[2025-10-08 02:10:09] 2025-10-08 06:09:04,788 | INFO     | adding to output.list: log.46376905._101934.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/6f/ed/log.46376905._101934.job.log.tg
[2025-10-08 02:10:09] 2025-10-08 06:09:04,788 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-08 02:10:09] 2025-10-08 06:09:04,788 | INFO     | summary of transferred files:
[2025-10-08 02:10:09] 2025-10-08 06:09:04,788 | INFO     |  -- lfn=log.46376905._101934.job.log.tgz.1, status_code=0, status=transferred
[2025-10-08 02:10:09] 2025-10-08 06:09:04,789 | INFO     | stage-out finished correctly
[2025-10-08 02:10:09] 2025-10-08 06:09:04,857 | INFO     | PID=1131 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-08 02:10:09] 2025-10-08 06:09:05,337 | WARNING  | process 7633 can no longer be monitored (due to stat problems) - aborting
[2025-10-08 02:10:09] 2025-10-08 06:09:05,337 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6832202831/memory_monitor_summary.json (trf name=prmon)
[2025-10-08 02:10:09] 2025-10-08 06:09:05,365 | INFO     | number of running child processes to parent process 7633: 1
[2025-10-08 02:10:09] 2025-10-08 06:09:05,365 | INFO     | maximum number of monitored processes: 6
[2025-10-08 02:10:09] 2025-10-08 06:09:05,857 | INFO     | time since job start (4990s) is within the limit (172800.0s)
[2025-10-08 02:10:09] 2025-10-08 06:09:07,399 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-08 02:10:09] 2025-10-08 06:09:07,863 | INFO     | time since job start (4992s) is within the limit (172800.0s)
[2025-10-08 02:10:09] 2025-10-08 06:09:07,868 | INFO     | monitor loop #378: job 0:6832202831 is in state 'finished'
[2025-10-08 02:10:09] 2025-10-08 06:09:07,868 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 02:10:09] 2025-10-08 06:09:09,395 | INFO     | job 6832202831 has state=finished
[2025-10-08 02:10:09] 2025-10-08 06:09:09,459 | INFO     | preparing for final server update for job 6832202831 in state='finished'
[2025-10-08 02:10:09] 2025-10-08 06:09:09,460 | INFO     | this job has now completed (state=finished)
[2025-10-08 02:10:09] 2025-10-08 06:09:09,460 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-08 02:10:09] 2025-10-08 06:09:09,460 | INFO     | log transfer has been attempted: DONE
[2025-10-08 02:10:09] 2025-10-08 06:09:09,460 | INFO     | job 6832202831 has finished - writing final server update
[2025-10-08 02:10:09] 2025-10-08 06:09:09,461 | INFO     | total number of processed events: 400 (read)
[2025-10-08 02:10:09] 2025-10-08 06:09:09,461 | INFO     | executing command: lscpu
[2025-10-08 02:10:09] 2025-10-08 06:09:09,485 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-08 02:10:09] 2025-10-08 06:09:09,868 | INFO     | time since job start (4994s) is within the limit (172800.0s)
[2025-10-08 02:10:09] 2025-10-08 06:09:10,371 | INFO     | monitor loop #379: job 0:6832202831 is in state 'finished'
[2025-10-08 02:10:09] 2025-10-08 06:09:10,371 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 02:10:09] 2025-10-08 06:09:11,874 | INFO     | time since job start (4996s) is within the limit (172800.0s)
[2025-10-08 02:10:09] 2025-10-08 06:09:12,417 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-08 02:10:09] 2025-10-08 06:09:12,418 | INFO     | found 4 cores (4 cores per socket, 1 socket) , CPU MHz: 1821.67
[2025-10-08 02:10:09] 2025-10-08 06:09:12,418 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6832202831/memory_monitor_summary.json (trf name=prmon)
[2025-10-08 02:10:09] 2025-10-08 06:09:12,419 | INFO     | extracted standard info from prmon json
[2025-10-08 02:10:09] 2025-10-08 06:09:12,419 | INFO     | extracted standard memory fields from prmon json
[2025-10-08 02:10:09] 2025-10-08 06:09:12,419 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-08 02:10:09] 2025-10-08 06:09:12,419 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-08 02:10:09] 2025-10-08 06:09:12,419 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-08 02:10:09] 2025-10-08 06:09:12,420 | INFO     | fitting pss+swap vs Time
[2025-10-08 02:10:09] 2025-10-08 06:09:12,420 | INFO     | sum of square deviations: 130793150.0
[2025-10-08 02:10:09] 2025-10-08 06:09:12,421 | INFO     | sum of deviations: -9652802259.999994
[2025-10-08 02:10:09] 2025-10-08 06:09:12,421 | INFO     | mean x: 1759901337.0
[2025-10-08 02:10:09] 2025-10-08 06:09:12,421 | INFO     | mean y: 2432948.5733333332
[2025-10-08 02:10:09] 2025-10-08 06:09:12,421 | INFO     | -- intersect: 129886754896.40172
[2025-10-08 02:10:09] 2025-10-08 06:09:12,421 | INFO     | intersect: 129886754896.40172
[2025-10-08 02:10:09] 2025-10-08 06:09:12,421 | INFO     | chi2: 0.07805818414527646
[2025-10-08 02:10:09] 2025-10-08 06:09:12,421 | INFO     | -- intersect: 129886754896.40172
[2025-10-08 02:10:09] 2025-10-08 06:09:12,421 | INFO     | current memory leak: -73.80 B/s (using 75 data points, chi2=0.08)
[2025-10-08 02:10:09] 2025-10-08 06:09:12,421 | INFO     | could have reported an average CPU frequency of 2995 MHz (6 samples)
[2025-10-08 02:10:09] 2025-10-08 06:09:12,421 | INFO     | ..............................
[2025-10-08 02:10:09] 2025-10-08 06:09:12,422 | INFO     | . Timing measurements:
[2025-10-08 02:10:09] 2025-10-08 06:09:12,422 | INFO     | . get job = 0 s
[2025-10-08 02:10:09] 2025-10-08 06:09:12,422 | INFO     | . initial setup = 2 s
[2025-10-08 02:10:09] 2025-10-08 06:09:12,422 | INFO     | . payload setup = 3 s
[2025-10-08 02:10:09] 2025-10-08 06:09:12,422 | INFO     | . stage-in = 0 s
[2025-10-08 02:10:09] 2025-10-08 06:09:12,422 | INFO     | . payload execution = 4967 s
[2025-10-08 02:10:09] 2025-10-08 06:09:12,422 | INFO     | . stage-out = 0 s
[2025-10-08 02:10:09] 2025-10-08 06:09:12,422 | INFO     | . log creation = 0 s
[2025-10-08 02:10:09] 2025-10-08 06:09:12,422 | INFO     | ..............................
[2025-10-08 02:10:09] 2025-10-08 06:09:12,462 | INFO     | 
[2025-10-08 02:10:09] 2025-10-08 06:09:12,463 | INFO     | job summary report
[2025-10-08 02:10:09] 2025-10-08 06:09:12,463 | INFO     | --------------------------------------------------
[2025-10-08 02:10:09] 2025-10-08 06:09:12,463 | INFO     | PanDA job id: 6832202831
[2025-10-08 02:10:09] 2025-10-08 06:09:12,463 | INFO     | task id: 46376905
[2025-10-08 02:10:09] 2025-10-08 06:09:12,463 | INFO     | errors: (none)
[2025-10-08 02:10:09] 2025-10-08 06:09:12,463 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-08 02:10:09] 2025-10-08 06:09:12,463 | INFO     | pilot state: finished 
[2025-10-08 02:10:09] 2025-10-08 06:09:12,463 | INFO     | transexitcode: 0
[2025-10-08 02:10:09] 2025-10-08 06:09:12,463 | INFO     | exeerrorcode: 0
[2025-10-08 02:10:09] 2025-10-08 06:09:12,463 | INFO     | exeerrordiag: 
[2025-10-08 02:10:09] 2025-10-08 06:09:12,463 | INFO     | exitcode: 0
[2025-10-08 02:10:09] 2025-10-08 06:09:12,463 | INFO     | exitmsg: OK
[2025-10-08 02:10:09] 2025-10-08 06:09:12,463 | INFO     | cpuconsumptiontime: 18898 s
[2025-10-08 02:10:09] 2025-10-08 06:09:12,463 | INFO     | nevents: 400
[2025-10-08 02:10:09] 2025-10-08 06:09:12,463 | INFO     | neventsw: 0
[2025-10-08 02:10:09] 2025-10-08 06:09:12,463 | INFO     | pid: 7633
[2025-10-08 02:10:09] 2025-10-08 06:09:12,463 | INFO     | pgrp: 7633
[2025-10-08 02:10:09] 2025-10-08 06:09:12,463 | INFO     | corecount: 4
[2025-10-08 02:10:09] 2025-10-08 06:09:12,463 | INFO     | event service: False
[2025-10-08 02:10:09] 2025-10-08 06:09:12,463 | INFO     | sizes: {0: 2348814, 2: 2349076, 11: 2349104, 4974: 2375507, 4976: 2384505, 4979: 2384561, 4984: 2384883}
[2025-10-08 02:10:09] 2025-10-08 06:09:12,463 | INFO     | --------------------------------------------------
[2025-10-08 02:10:09] 2025-10-08 06:09:12,463 | INFO     | 
[2025-10-08 02:10:09] 2025-10-08 06:09:12,464 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-08 02:10:09] 2025-10-08 06:09:12,475 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-08 02:10:09] 2025-10-08 06:09:12,475 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-08 02:10:09] 2025-10-08 06:09:12,475 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-08 02:10:09] 2025-10-08 06:09:12,475 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-08 02:10:09] 2025-10-08 06:09:12,475 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-08 02:10:09] 2025-10-08 06:09:12,475 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-08 02:10:09] 2025-10-08 06:09:12,475 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-08 02:10:09] 2025-10-08 06:09:12,475 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-08 02:10:09] 2025-10-08 06:09:12,475 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-08 02:10:09] 2025-10-08 06:09:12,475 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-08 02:10:09] 2025-10-08 06:09:12,475 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-08 02:10:09] 2025-10-08 06:09:12,475 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-08 02:10:09] 2025-10-08 06:09:12,475 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-08 02:10:09] 2025-10-08 06:09:12,475 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-08 02:10:09] 2025-10-08 06:09:12,476 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-08 02:10:09] 2025-10-08 06:09:12,476 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-08 02:10:09] 2025-10-08 06:09:12,476 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-08 02:10:09] 2025-10-08 06:09:12,476 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-08 02:10:09] 2025-10-08 06:09:12,476 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-08 02:10:09] 2025-10-08 06:09:12,476 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-08 02:10:09] 2025-10-08 06:09:12,476 | INFO     | job 6832202831 has completed (purged errors)
[2025-10-08 02:10:09] 2025-10-08 06:09:12,476 | INFO     | overall cleanup function is called
[2025-10-08 02:10:09] 2025-10-08 06:09:13,482 | INFO     | --- collectZombieJob: --- 10, [7633]
[2025-10-08 02:10:09] 2025-10-08 06:09:13,482 | INFO     | zombie collector waiting for pid 7633
[2025-10-08 02:10:09] 2025-10-08 06:09:13,482 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-08 02:10:09] 2025-10-08 06:09:13,482 | INFO     | collected zombie processes
[2025-10-08 02:10:09] 2025-10-08 06:09:13,483 | INFO     | will attempt to kill all subprocesses of pid=7633
[2025-10-08 02:10:09] 2025-10-08 06:09:13,514 | INFO     | process IDs to be killed: [7633] (in reverse order)
[2025-10-08 02:10:09] 2025-10-08 06:09:13,536 | WARNING  | found no corresponding commands to process id(s)
[2025-10-08 02:10:09] 2025-10-08 06:09:13,536 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-08 02:10:09] 2025-10-08 06:09:13,537 | INFO     | did not find any defunct processes belonging to 7633
[2025-10-08 02:10:09] 2025-10-08 06:09:13,538 | INFO     | did not find any defunct processes belonging to 7633
[2025-10-08 02:10:09] 2025-10-08 06:09:13,538 | INFO     | ready for new job
[2025-10-08 02:10:09] 2025-10-08 06:09:13,538 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-08 02:10:09] 2025-10-08 06:09:13,539 | INFO     | ***************************************
[2025-10-08 02:10:09] 2025-10-08 06:09:13,539 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-08 02:10:09] 2025-10-08 06:09:13,539 | INFO     | ***************************************
[2025-10-08 02:10:09] 2025-10-08 06:09:13,539 | INFO     | 
[2025-10-08 02:10:09] 2025-10-08 06:09:13,539 | INFO     | architecture information:
[2025-10-08 02:10:09] 2025-10-08 06:09:13,539 | INFO     | executing command: cat /etc/os-release
[2025-10-08 02:10:09] 2025-10-08 06:09:13,549 | INFO     | cat /etc/os-release:
[2025-10-08 02:10:09] NAME="CentOS Linux"
[2025-10-08 02:10:09] VERSION="7 (Core)"
[2025-10-08 02:10:09] ID="centos"
[2025-10-08 02:10:09] ID_LIKE="rhel fedora"
[2025-10-08 02:10:09] VERSION_ID="7"
[2025-10-08 02:10:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-08 02:10:09] ANSI_COLOR="0;31"
[2025-10-08 02:10:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-08 02:10:09] HOME_URL="https://www.centos.org/"
[2025-10-08 02:10:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-08 02:10:09] 
[2025-10-08 02:10:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-08 02:10:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-08 02:10:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-08 02:10:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-08 02:10:09] 
[2025-10-08 02:10:09] 2025-10-08 06:09:13,549 | INFO     | ***************************************
[2025-10-08 02:10:09] 2025-10-08 06:09:14,051 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-08 02:10:09] 2025-10-08 06:09:14,068 | INFO     | sufficient remaining disk space (29391585280 B)
[2025-10-08 02:10:09] 2025-10-08 06:09:14,068 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-08 02:10:09] 2025-10-08 06:09:14,068 | INFO     | current server update state: UPDATING_FINAL
[2025-10-08 02:10:09] 2025-10-08 06:09:14,069 | INFO     | update_server=False
[2025-10-08 02:10:09] 2025-10-08 06:09:14,069 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-08 02:10:09] 2025-10-08 06:09:14,069 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-08 02:10:09] 2025-10-08 06:09:14,069 | INFO     | aborting loop
[2025-10-08 02:10:09] 2025-10-08 06:09:14,070 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-08 02:10:09] 2025-10-08 06:09:14,070 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-08 02:10:09] 2025-10-08 06:09:14,267 | INFO     | all data control threads have been joined
[2025-10-08 02:10:09] 2025-10-08 06:09:15,071 | INFO     | [job] job monitor thread has finished
[2025-10-08 02:10:09] 2025-10-08 06:09:15,074 | INFO     | [job] retrieve thread has finished
[2025-10-08 02:10:09] 2025-10-08 06:09:15,075 | INFO     | [job] queue monitor thread has finished
[2025-10-08 02:10:09] 2025-10-08 06:09:15,227 | INFO     | [payload] validate_post thread has finished
[2025-10-08 02:10:09] 2025-10-08 06:09:15,272 | INFO     | [data] control thread has finished
[2025-10-08 02:10:09] 2025-10-08 06:09:15,340 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-08 02:10:09] 2025-10-08 06:09:15,374 | INFO     | all payload control threads have been joined
[2025-10-08 02:10:09] 2025-10-08 06:09:15,470 | INFO     | all job control threads have been joined
[2025-10-08 02:10:09] 2025-10-08 06:09:15,625 | INFO     | [payload] execute_payloads thread has finished
[2025-10-08 02:10:09] 2025-10-08 06:09:15,638 | INFO     | [data] copytool_in thread has finished
[2025-10-08 02:10:09] 2025-10-08 06:09:15,957 | INFO     | [job] validate thread has finished
[2025-10-08 02:10:09] 2025-10-08 06:09:16,201 | INFO     | [job] create_data_payload thread has finished
[2025-10-08 02:10:09] 2025-10-08 06:09:16,333 | INFO     | [payload] failed_post thread has finished
[2025-10-08 02:10:09] 2025-10-08 06:09:16,371 | INFO     | [payload] validate_pre thread has finished
[2025-10-08 02:10:09] 2025-10-08 06:09:16,379 | INFO     | [payload] control thread has finished
[2025-10-08 02:10:09] 2025-10-08 06:09:16,475 | INFO     | [job] control thread has finished
[2025-10-08 02:10:09] 2025-10-08 06:09:17,345 | INFO     | [data] copytool_out thread has finished
[2025-10-08 02:10:09] 2025-10-08 06:09:18,076 | INFO     | [data] queue_monitor thread has finished
[2025-10-08 02:10:09] 2025-10-08 06:09:24,697 | INFO     | job.realtimelogging is not enabled
[2025-10-08 02:10:09] 2025-10-08 06:09:25,702 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-08 02:10:09] 2025-10-08 06:09:45,014 | INFO     | PID=1131 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-08 02:10:09] 2025-10-08 06:09:45,014 | INFO     | found 0 job(s) in 20 queues
[2025-10-08 02:10:09] 2025-10-08 06:09:45,014 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-08 02:10:09] 2025-10-08 06:09:45,014 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-08 02:10:09] 2025-10-08 06:10:03,229 | INFO     | [monitor] cgroup control has ended
[2025-10-08 02:10:09] 2025-10-08 06:10:04,029 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140398104389440)>', '<ExcThread(monitor, started 140397313521408)>']
[2025-10-08 02:10:09] 2025-10-08 06:10:04,101 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-08 02:10:09] 2025-10-08 06:10:04,101 | INFO     | [monitor] control thread has ended
[2025-10-08 02:10:09] 2025-10-08 06:10:09,054 | INFO     | all workflow threads have been joined
[2025-10-08 02:10:09] 2025-10-08 06:10:09,054 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-08 02:10:09] 2025-10-08 06:10:09,054 | INFO     | traces error code: 0
[2025-10-08 02:10:09] 2025-10-08 06:10:09,054 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-08 02:10:09] 2025-10-08 06:10:09,113 [wrapper] ==== pilot stdout END ====
[2025-10-08 02:10:09] 2025-10-08 06:10:09,114 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-08 02:10:09] 2025-10-08 06:10:09,116 [wrapper] pilotpid: 1131
[2025-10-08 02:10:09] 2025-10-08 06:10:09,118 [wrapper] Pilot exit status: 0
[2025-10-08 02:10:09] 2025-10-08 06:10:09,124 [wrapper] pandaids: 6832202831
[2025-10-08 02:10:09] 2025-10-08 06:10:09,139 [wrapper] cleanup supervisor_pilot  2473 1132
[2025-10-08 02:10:09] 2025-10-08 06:10:09,141 [wrapper] Test setup, not cleaning
[2025-10-08 02:10:09] 2025-10-08 06:10:09,143 [wrapper] apfmon messages muted
[2025-10-08 02:10:09] 2025-10-08 06:10:09,145 [wrapper] ==== wrapper stdout END ====
[2025-10-08 02:10:09] 2025-10-08 06:10:09,147 [wrapper] ==== wrapper stderr END ====
[2025-10-08 02:10:09]  *** Error codes and diagnostics ***
[2025-10-08 02:10:09]     "exeErrorCode": 0,
[2025-10-08 02:10:09]     "exeErrorDiag": "",
[2025-10-08 02:10:09]     "pilotErrorCode": 0,
[2025-10-08 02:10:09]     "pilotErrorDiag": "",
[2025-10-08 02:10:09]  *** Listing of results directory ***
[2025-10-08 02:10:09] total 391068
[2025-10-08 02:10:09] -rw-r--r-- 1 boincer umatlas      5112 Oct  5 21:28 queuedata.json
[2025-10-08 02:10:09] -rwx------ 1 boincer umatlas     36292 Oct  5 21:29 runpilot2-wrapper.sh
[2025-10-08 02:10:09] -rw-r--r-- 1 boincer umatlas    552446 Oct  5 21:29 pilot3.tar.gz
[2025-10-08 02:10:09] -rw-r--r-- 1 boincer umatlas       100 Oct  8 00:45 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-08 02:10:09] -rwxr-xr-x 1 boincer umatlas      7986 Oct  8 00:45 run_atlas
[2025-10-08 02:10:09] -rw-r--r-- 1 boincer umatlas       105 Oct  8 00:45 job.xml
[2025-10-08 02:10:09] -rw-r--r-- 2 boincer umatlas 214000863 Oct  8 00:45 EVNT.46376901._003770.pool.root.1
[2025-10-08 02:10:09] -rw-r--r-- 2 boincer umatlas     15120 Oct  8 00:45 start_atlas.sh
[2025-10-08 02:10:09] drwxrwx--x 2 boincer umatlas      4096 Oct  8 00:45 shared
[2025-10-08 02:10:09] -rw-r--r-- 2 boincer umatlas    565594 Oct  8 00:45 input.tar.gz
[2025-10-08 02:10:09] -rw-r--r-- 1 boincer umatlas         0 Oct  8 00:45 boinc_lockfile
[2025-10-08 02:10:09] -rw-r--r-- 1 boincer umatlas      2518 Oct  8 00:45 pandaJob.out
[2025-10-08 02:10:09] -rw------- 1 boincer umatlas    979841 Oct  8 00:45 agis_schedconf.cvmfs.json
[2025-10-08 02:10:09] -rw------- 1 boincer umatlas   1560401 Oct  8 00:45 agis_ddmendpoints.agis.ALL.json
[2025-10-08 02:10:09] drwx------ 4 boincer umatlas      4096 Oct  8 00:45 pilot3
[2025-10-08 02:10:09] -rw-r--r-- 1 boincer umatlas      6238 Oct  8 02:03 init_data.xml
[2025-10-08 02:10:09] -rw-r--r-- 1 boincer umatlas       529 Oct  8 02:08 boinc_task_state.xml
[2025-10-08 02:10:09] -rw------- 1 boincer umatlas 180593736 Oct  8 02:08 HITS.46376905._101934.pool.root.1
[2025-10-08 02:10:09] -rw------- 1 boincer umatlas      1040 Oct  8 02:08 memory_monitor_summary.json
[2025-10-08 02:10:09] -rw------- 1 boincer umatlas    258244 Oct  8 02:09 log.46376905._101934.job.log.tgz.1
[2025-10-08 02:10:09] -rw------- 1 boincer umatlas      7829 Oct  8 02:09 heartbeat.json
[2025-10-08 02:10:09] -rw------- 1 boincer umatlas        95 Oct  8 02:09 pilot_heartbeat.json
[2025-10-08 02:10:09] -rw-r--r-- 1 boincer umatlas      8192 Oct  8 02:09 boinc_mmap_file
[2025-10-08 02:10:09] -rw-r--r-- 1 boincer umatlas        27 Oct  8 02:09 wrapper_checkpoint.txt
[2025-10-08 02:10:09] -rw------- 1 boincer umatlas      4817 Oct  8 02:10 pilotlog.txt
[2025-10-08 02:10:09] -rw------- 1 boincer umatlas    722034 Oct  8 02:10 log.46376905._101934.job.log.1
[2025-10-08 02:10:09] -rw------- 1 boincer umatlas       357 Oct  8 02:10 output.list
[2025-10-08 02:10:09] -rw-r--r-- 1 boincer umatlas       620 Oct  8 02:10 runtime_log
[2025-10-08 02:10:09] -rw------- 1 boincer umatlas   1003520 Oct  8 02:10 result.tar.gz
[2025-10-08 02:10:09] -rw-r--r-- 1 boincer umatlas      8703 Oct  8 02:10 runtime_log.err
[2025-10-08 02:10:09] -rw------- 1 boincer umatlas       656 Oct  8 02:10 aHcLDmMDpP8n9Rq4apOajLDm4fhM0noT9bVof3QYDm09HMDm3EOgFn.diag
[2025-10-08 02:10:09] -rw-r--r-- 1 boincer umatlas     22157 Oct  8 02:10 stderr.txt
[2025-10-08 02:10:09] HITS file was successfully produced:
[2025-10-08 02:10:09] -rw------- 1 boincer umatlas 180593736 Oct  8 02:08 shared/HITS.pool.root.1
[2025-10-08 02:10:09]  *** Contents of shared directory: ***
[2025-10-08 02:10:09] total 386908
[2025-10-08 02:10:09] -rw-r--r-- 2 boincer umatlas 214000863 Oct  8 00:45 ATLAS.root_0
[2025-10-08 02:10:09] -rw-r--r-- 2 boincer umatlas     15120 Oct  8 00:45 start_atlas.sh
[2025-10-08 02:10:09] -rw-r--r-- 2 boincer umatlas    565594 Oct  8 00:45 input.tar.gz
[2025-10-08 02:10:09] -rw------- 1 boincer umatlas 180593736 Oct  8 02:08 HITS.pool.root.1
[2025-10-08 02:10:09] -rw------- 1 boincer umatlas   1003520 Oct  8 02:10 result.tar.gz
02:10:10 (29531): run_atlas exited; CPU time 18906.562765
02:10:10 (29531): called boinc_finish(0)

</stderr_txt>
]]>

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