Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:19:36 (1252166): wrapper (7.7.26015): starting
00:19:36 (1252166): wrapper: running run_atlas (--nthreads 8)
[2025-10-08 00:19:36] Arguments: --nthreads 8
[2025-10-08 00:19:36] Threads: 8
[2025-10-08 00:19:36] Checking for CVMFS
[2025-10-08 00:19:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 00:19:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 00:19:37] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 00:19:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 00:19:38] 2.13.2.0 3405823 1828 154768 151458 2 310 18712278 32503808 24336 16776704 0 16858440 99.670 14108809 33538 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-08 00:19:38] CVMFS is ok
[2025-10-08 00:19:38] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-08 00:19:38] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-08 00:19:38] Further information can be found at the LHC@home message board.
[2025-10-08 00:19:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 00:19:38] Checking for apptainer binary...
[2025-10-08 00:19:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 00:19:38] Running /usr/bin/apptainer --version
[2025-10-08 00:19:38] apptainer version 1.4.2-1.el9
[2025-10-08 00:19:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 00:19:39] c8-7-2.aglt2.org
[2025-10-08 00:19:39] apptainer works
[2025-10-08 00:19:39] Set ATHENA_PROC_NUMBER=8
[2025-10-08 00:19:39] Set ATHENA_CORE_NUMBER=8
[2025-10-08 00:19:39] Starting ATLAS job with PandaID=6830896420
[2025-10-08 00:19:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-08 01:52:54]  *** The last 200 lines of the pilot log: ***
[2025-10-08 01:52:54] 2025-10-08 05:51:54,455 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-08 01:52:54] 2025-10-08 05:51:54,455 | INFO     | summary of transferred files:
[2025-10-08 01:52:54] 2025-10-08 05:51:54,455 | INFO     |  -- lfn=log.46376905._076546.job.log.tgz.1, status_code=0, status=transferred
[2025-10-08 01:52:54] 2025-10-08 05:51:54,455 | INFO     | stage-out finished correctly
[2025-10-08 01:52:54] 2025-10-08 05:51:54,511 | INFO     | time since job start (5475s) is within the limit (172800.0s)
[2025-10-08 01:52:54] 2025-10-08 05:51:54,902 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-08 01:52:54] 2025-10-08 05:51:56,450 | WARNING  | process 1297003 can no longer be monitored (due to stat problems) - aborting
[2025-10-08 01:52:54] 2025-10-08 05:51:56,451 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6830896420/memory_monitor_summary.json (trf name=prmon)
[2025-10-08 01:52:54] 2025-10-08 05:51:56,528 | INFO     | time since job start (5477s) is within the limit (172800.0s)
[2025-10-08 01:52:54] 2025-10-08 05:51:57,085 | INFO     | number of running child processes to parent process 1297003: 1
[2025-10-08 01:52:54] 2025-10-08 05:51:57,086 | INFO     | maximum number of monitored processes: 6
[2025-10-08 01:52:54] 2025-10-08 05:51:57,396 | INFO     | job 6830896420 has state=finished
[2025-10-08 01:52:54] 2025-10-08 05:51:57,397 | INFO     | preparing for final server update for job 6830896420 in state='finished'
[2025-10-08 01:52:54] 2025-10-08 05:51:57,397 | INFO     | this job has now completed (state=finished)
[2025-10-08 01:52:54] 2025-10-08 05:51:57,397 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-08 01:52:54] 2025-10-08 05:51:57,397 | INFO     | log transfer has been attempted: DONE
[2025-10-08 01:52:54] 2025-10-08 05:51:57,397 | INFO     | job 6830896420 has finished - writing final server update
[2025-10-08 01:52:54] 2025-10-08 05:51:57,397 | INFO     | total number of processed events: 400 (read)
[2025-10-08 01:52:54] 2025-10-08 05:51:57,410 | INFO     | executing command: lscpu
[2025-10-08 01:52:54] 2025-10-08 05:51:57,536 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-08 01:52:54] 2025-10-08 05:51:58,535 | INFO     | time since job start (5479s) is within the limit (172800.0s)
[2025-10-08 01:52:54] 2025-10-08 05:51:59,590 | INFO     | monitor loop #354: job 0:6830896420 is in state 'finished'
[2025-10-08 01:52:54] 2025-10-08 05:51:59,591 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 01:52:54] 2025-10-08 05:52:00,542 | INFO     | time since job start (5481s) is within the limit (172800.0s)
[2025-10-08 01:52:54] 2025-10-08 05:52:02,098 | INFO     | monitor loop #355: job 0:6830896420 is in state 'finished'
[2025-10-08 01:52:54] 2025-10-08 05:52:02,099 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 01:52:54] 2025-10-08 05:52:02,548 | INFO     | time since job start (5483s) is within the limit (172800.0s)
[2025-10-08 01:52:54] 2025-10-08 05:52:04,555 | INFO     | time since job start (5485s) is within the limit (172800.0s)
[2025-10-08 01:52:54] 2025-10-08 05:52:04,614 | INFO     | monitor loop #356: job 0:6830896420 is in state 'finished'
[2025-10-08 01:52:54] 2025-10-08 05:52:04,615 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 01:52:54] 2025-10-08 05:52:06,857 | INFO     | PID=1265922 has CPU usage=9.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-08 01:52:54] 2025-10-08 05:52:06,860 | INFO     | .. there are 34 such processes running
[2025-10-08 01:52:54] 2025-10-08 05:52:07,124 | INFO     | monitor loop #357: job 0:6830896420 is in state 'finished'
[2025-10-08 01:52:54] 2025-10-08 05:52:07,125 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 01:52:54] 2025-10-08 05:52:07,861 | INFO     | time since job start (5488s) is within the limit (172800.0s)
[2025-10-08 01:52:54] 2025-10-08 05:52:08,091 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-08 01:52:54] 2025-10-08 05:52:08,109 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3800.1532890624994
[2025-10-08 01:52:54] 2025-10-08 05:52:08,120 | INFO     | using path: /tmp/boinchome/slots/5/PanDA_Pilot-6830896420/memory_monitor_summary.json (trf name=prmon)
[2025-10-08 01:52:54] 2025-10-08 05:52:08,120 | INFO     | extracted standard info from prmon json
[2025-10-08 01:52:54] 2025-10-08 05:52:08,120 | INFO     | extracted standard memory fields from prmon json
[2025-10-08 01:52:54] 2025-10-08 05:52:08,120 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-08 01:52:54] 2025-10-08 05:52:08,120 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-08 01:52:54] 2025-10-08 05:52:08,121 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-08 01:52:54] 2025-10-08 05:52:08,122 | INFO     | fitting pss+swap vs Time
[2025-10-08 01:52:54] 2025-10-08 05:52:08,122 | INFO     | sum of square deviations: 164774356.2469135
[2025-10-08 01:52:54] 2025-10-08 05:52:08,122 | INFO     | sum of deviations: -6806778249.3950615
[2025-10-08 01:52:54] 2025-10-08 05:52:08,122 | INFO     | mean x: 1759900118.493827
[2025-10-08 01:52:54] 2025-10-08 05:52:08,122 | INFO     | mean y: 2585793.2098765434
[2025-10-08 01:52:54] 2025-10-08 05:52:08,122 | INFO     | -- intersect: 72703521306.01947
[2025-10-08 01:52:54] 2025-10-08 05:52:08,122 | INFO     | intersect: 72703521306.01947
[2025-10-08 01:52:54] 2025-10-08 05:52:08,122 | INFO     | chi2: 0.07782287696266768
[2025-10-08 01:52:54] 2025-10-08 05:52:08,122 | INFO     | -- intersect: 72703521306.01947
[2025-10-08 01:52:54] 2025-10-08 05:52:08,122 | INFO     | current memory leak: -41.31 B/s (using 81 data points, chi2=0.08)
[2025-10-08 01:52:54] 2025-10-08 05:52:08,122 | INFO     | could have reported an average CPU frequency of 3799 MHz (6 samples)
[2025-10-08 01:52:54] 2025-10-08 05:52:08,122 | INFO     | ..............................
[2025-10-08 01:52:54] 2025-10-08 05:52:08,122 | INFO     | . Timing measurements:
[2025-10-08 01:52:54] 2025-10-08 05:52:08,122 | INFO     | . get job = 0 s
[2025-10-08 01:52:54] 2025-10-08 05:52:08,122 | INFO     | . initial setup = 8 s
[2025-10-08 01:52:54] 2025-10-08 05:52:08,123 | INFO     | . payload setup = 37 s
[2025-10-08 01:52:54] 2025-10-08 05:52:08,123 | INFO     | . stage-in = 0 s
[2025-10-08 01:52:54] 2025-10-08 05:52:08,123 | INFO     | . payload execution = 5371 s
[2025-10-08 01:52:54] 2025-10-08 05:52:08,123 | INFO     | . stage-out = 1 s
[2025-10-08 01:52:54] 2025-10-08 05:52:08,123 | INFO     | . log creation = 0 s
[2025-10-08 01:52:54] 2025-10-08 05:52:08,123 | INFO     | ..............................
[2025-10-08 01:52:54] 2025-10-08 05:52:08,215 | INFO     | 
[2025-10-08 01:52:54] 2025-10-08 05:52:08,216 | INFO     | job summary report
[2025-10-08 01:52:54] 2025-10-08 05:52:08,216 | INFO     | --------------------------------------------------
[2025-10-08 01:52:54] 2025-10-08 05:52:08,216 | INFO     | PanDA job id: 6830896420
[2025-10-08 01:52:54] 2025-10-08 05:52:08,216 | INFO     | task id: 46376905
[2025-10-08 01:52:54] 2025-10-08 05:52:08,216 | INFO     | errors: (none)
[2025-10-08 01:52:54] 2025-10-08 05:52:08,216 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-08 01:52:54] 2025-10-08 05:52:08,216 | INFO     | pilot state: finished 
[2025-10-08 01:52:54] 2025-10-08 05:52:08,216 | INFO     | transexitcode: 0
[2025-10-08 01:52:54] 2025-10-08 05:52:08,216 | INFO     | exeerrorcode: 0
[2025-10-08 01:52:54] 2025-10-08 05:52:08,216 | INFO     | exeerrordiag: 
[2025-10-08 01:52:54] 2025-10-08 05:52:08,216 | INFO     | exitcode: 0
[2025-10-08 01:52:54] 2025-10-08 05:52:08,216 | INFO     | exitmsg: OK
[2025-10-08 01:52:54] 2025-10-08 05:52:08,216 | INFO     | cpuconsumptiontime: 20016 s
[2025-10-08 01:52:54] 2025-10-08 05:52:08,216 | INFO     | nevents: 400
[2025-10-08 01:52:54] 2025-10-08 05:52:08,216 | INFO     | neventsw: 0
[2025-10-08 01:52:54] 2025-10-08 05:52:08,216 | INFO     | pid: 1297003
[2025-10-08 01:52:54] 2025-10-08 05:52:08,216 | INFO     | pgrp: 1297003
[2025-10-08 01:52:54] 2025-10-08 05:52:08,216 | INFO     | corecount: 8
[2025-10-08 01:52:54] 2025-10-08 05:52:08,216 | INFO     | event service: False
[2025-10-08 01:52:54] 2025-10-08 05:52:08,216 | INFO     | sizes: {0: 2347988, 1: 2348844, 12: 2348844, 23: 2348872, 29: 2349162, 33: 2349190, 5413: 2375850, 5415: 2384904, 5428: 2385042}
[2025-10-08 01:52:54] 2025-10-08 05:52:08,216 | INFO     | --------------------------------------------------
[2025-10-08 01:52:54] 2025-10-08 05:52:08,216 | INFO     | 
[2025-10-08 01:52:54] 2025-10-08 05:52:08,216 | INFO     | executing command: ls -lF /tmp/boinchome/slots/5
[2025-10-08 01:52:54] 2025-10-08 05:52:08,246 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-08 01:52:54] 2025-10-08 05:52:08,246 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-08 01:52:54] 2025-10-08 05:52:08,246 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-08 01:52:54] 2025-10-08 05:52:08,246 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-08 01:52:54] 2025-10-08 05:52:08,246 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-08 01:52:54] 2025-10-08 05:52:08,246 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-08 01:52:54] 2025-10-08 05:52:08,246 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-08 01:52:54] 2025-10-08 05:52:08,246 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-08 01:52:54] 2025-10-08 05:52:08,246 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-08 01:52:54] 2025-10-08 05:52:08,246 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-08 01:52:54] 2025-10-08 05:52:08,246 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-08 01:52:54] 2025-10-08 05:52:08,246 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-08 01:52:54] 2025-10-08 05:52:08,247 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-08 01:52:54] 2025-10-08 05:52:08,247 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-08 01:52:54] 2025-10-08 05:52:08,247 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-08 01:52:54] 2025-10-08 05:52:08,247 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-08 01:52:54] 2025-10-08 05:52:08,247 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-08 01:52:54] 2025-10-08 05:52:08,247 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-08 01:52:54] 2025-10-08 05:52:08,247 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-08 01:52:54] 2025-10-08 05:52:08,247 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-08 01:52:54] 2025-10-08 05:52:08,247 | INFO     | job 6830896420 has completed (purged errors)
[2025-10-08 01:52:54] 2025-10-08 05:52:08,247 | INFO     | overall cleanup function is called
[2025-10-08 01:52:54] 2025-10-08 05:52:09,259 | INFO     | --- collectZombieJob: --- 10, [1297003]
[2025-10-08 01:52:54] 2025-10-08 05:52:09,260 | INFO     | zombie collector waiting for pid 1297003
[2025-10-08 01:52:54] 2025-10-08 05:52:09,260 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-08 01:52:54] 2025-10-08 05:52:09,260 | INFO     | collected zombie processes
[2025-10-08 01:52:54] 2025-10-08 05:52:09,260 | INFO     | will attempt to kill all subprocesses of pid=1297003
[2025-10-08 01:52:54] 2025-10-08 05:52:10,210 | INFO     | process IDs to be killed: [1297003] (in reverse order)
[2025-10-08 01:52:54] 2025-10-08 05:52:10,469 | WARNING  | found no corresponding commands to process id(s)
[2025-10-08 01:52:54] 2025-10-08 05:52:10,469 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-08 01:52:54] 2025-10-08 05:52:10,558 | INFO     | did not find any defunct processes belonging to 1297003
[2025-10-08 01:52:54] 2025-10-08 05:52:10,627 | INFO     | did not find any defunct processes belonging to 1297003
[2025-10-08 01:52:54] 2025-10-08 05:52:10,628 | INFO     | ready for new job
[2025-10-08 01:52:54] 2025-10-08 05:52:10,628 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-08 01:52:54] 2025-10-08 05:52:10,629 | INFO     | ***************************************
[2025-10-08 01:52:54] 2025-10-08 05:52:10,629 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-08 01:52:54] 2025-10-08 05:52:10,629 | INFO     | ***************************************
[2025-10-08 01:52:54] 2025-10-08 05:52:10,629 | INFO     | 
[2025-10-08 01:52:54] 2025-10-08 05:52:10,643 | INFO     | architecture information:
[2025-10-08 01:52:54] 2025-10-08 05:52:10,643 | INFO     | executing command: cat /etc/os-release
[2025-10-08 01:52:54] 2025-10-08 05:52:10,684 | INFO     | cat /etc/os-release:
[2025-10-08 01:52:54] NAME="CentOS Linux"
[2025-10-08 01:52:54] VERSION="7 (Core)"
[2025-10-08 01:52:54] ID="centos"
[2025-10-08 01:52:54] ID_LIKE="rhel fedora"
[2025-10-08 01:52:54] VERSION_ID="7"
[2025-10-08 01:52:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-08 01:52:54] ANSI_COLOR="0;31"
[2025-10-08 01:52:54] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-08 01:52:54] HOME_URL="https://www.centos.org/"
[2025-10-08 01:52:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-08 01:52:54] 
[2025-10-08 01:52:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-08 01:52:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-08 01:52:54] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-08 01:52:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-08 01:52:54] 
[2025-10-08 01:52:54] 2025-10-08 05:52:10,684 | INFO     | ***************************************
[2025-10-08 01:52:54] 2025-10-08 05:52:11,190 | INFO     | executing command: df -mP /tmp/boinchome/slots/5
[2025-10-08 01:52:54] 2025-10-08 05:52:11,213 | INFO     | sufficient remaining disk space (93828677632 B)
[2025-10-08 01:52:54] 2025-10-08 05:52:11,213 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-08 01:52:54] 2025-10-08 05:52:11,213 | INFO     | current server update state: UPDATING_FINAL
[2025-10-08 01:52:54] 2025-10-08 05:52:11,213 | INFO     | update_server=False
[2025-10-08 01:52:54] 2025-10-08 05:52:11,213 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-08 01:52:54] 2025-10-08 05:52:11,214 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-08 01:52:54] 2025-10-08 05:52:11,214 | INFO     | aborting loop
[2025-10-08 01:52:54] 2025-10-08 05:52:11,242 | INFO     | all data control threads have been joined
[2025-10-08 01:52:54] 2025-10-08 05:52:11,341 | INFO     | all job control threads have been joined
[2025-10-08 01:52:54] 2025-10-08 05:52:11,846 | INFO     | all payload control threads have been joined
[2025-10-08 01:52:54] 2025-10-08 05:52:12,219 | INFO     | [job] retrieve thread has finished
[2025-10-08 01:52:54] 2025-10-08 05:52:12,219 | INFO     | [job] job monitor thread has finished
[2025-10-08 01:52:54] 2025-10-08 05:52:12,248 | INFO     | [data] control thread has finished
[2025-10-08 01:52:54] 2025-10-08 05:52:12,347 | INFO     | [job] control thread has finished
[2025-10-08 01:52:54] 2025-10-08 05:52:12,473 | INFO     | [job] validate thread has finished
[2025-10-08 01:52:54] 2025-10-08 05:52:12,632 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-08 01:52:54] 2025-10-08 05:52:12,852 | INFO     | [payload] control thread has finished
[2025-10-08 01:52:54] 2025-10-08 05:52:13,003 | INFO     | [payload] validate_pre thread has finished
[2025-10-08 01:52:54] 2025-10-08 05:52:13,192 | INFO     | [data] copytool_in thread has finished
[2025-10-08 01:52:54] 2025-10-08 05:52:13,193 | INFO     | [payload] execute_payloads thread has finished
[2025-10-08 01:52:54] 2025-10-08 05:52:13,204 | INFO     | [payload] failed_post thread has finished
[2025-10-08 01:52:54] 2025-10-08 05:52:13,240 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-08 01:52:54] 2025-10-08 05:52:13,350 | INFO     | [payload] validate_post thread has finished
[2025-10-08 01:52:54] 2025-10-08 05:52:13,709 | INFO     | [job] create_data_payload thread has finished
[2025-10-08 01:52:54] 2025-10-08 05:52:14,247 | INFO     | [job] queue monitor thread has finished
[2025-10-08 01:52:54] 2025-10-08 05:52:14,638 | INFO     | [data] copytool_out thread has finished
[2025-10-08 01:52:54] 2025-10-08 05:52:14,711 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-08 01:52:54] 2025-10-08 05:52:18,720 | INFO     | [data] queue_monitor thread has finished
[2025-10-08 01:52:54] 2025-10-08 05:52:21,490 | INFO     | job.realtimelogging is not enabled
[2025-10-08 01:52:54] 2025-10-08 05:52:22,496 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-08 01:52:54] 2025-10-08 05:52:41,768 | INFO     | PID=1265922 has CPU usage=3.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-08 01:52:54] 2025-10-08 05:52:41,768 | INFO     | .. there are 34 such processes running
[2025-10-08 01:52:54] 2025-10-08 05:52:41,769 | INFO     | found 0 job(s) in 20 queues
[2025-10-08 01:52:54] 2025-10-08 05:52:41,769 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-08 01:52:54] 2025-10-08 05:52:41,769 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-08 01:52:54] 2025-10-08 05:52:48,208 | INFO     | [monitor] cgroup control has ended
[2025-10-08 01:52:54] 2025-10-08 05:52:48,900 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140075473913664)>', '<ExcThread(monitor, started 140074989647616)>']
[2025-10-08 01:52:54] 2025-10-08 05:52:49,819 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-08 01:52:54] 2025-10-08 05:52:49,820 | INFO     | [monitor] control thread has ended
[2025-10-08 01:52:54] 2025-10-08 05:52:53,926 | INFO     | all workflow threads have been joined
[2025-10-08 01:52:54] 2025-10-08 05:52:53,927 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-08 01:52:54] 2025-10-08 05:52:53,927 | INFO     | traces error code: 0
[2025-10-08 01:52:54] 2025-10-08 05:52:53,927 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-08 01:52:54] 2025-10-08 05:52:54,209 [wrapper] ==== pilot stdout END ====
[2025-10-08 01:52:54] 2025-10-08 05:52:54,218 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-08 01:52:54] 2025-10-08 05:52:54,221 [wrapper] pilotpid: 1265922
[2025-10-08 01:52:54] 2025-10-08 05:52:54,234 [wrapper] Pilot exit status: 0
[2025-10-08 01:52:54] 2025-10-08 05:52:54,315 [wrapper] pandaids: 6830896420
[2025-10-08 01:52:54] 2025-10-08 05:52:54,491 [wrapper] cleanup supervisor_pilot 2226431 1265923
[2025-10-08 01:52:54] 2025-10-08 05:52:54,494 [wrapper] Test setup, not cleaning
[2025-10-08 01:52:54] 2025-10-08 05:52:54,498 [wrapper] apfmon messages muted
[2025-10-08 01:52:54] 2025-10-08 05:52:54,504 [wrapper] ==== wrapper stdout END ====
[2025-10-08 01:52:54] 2025-10-08 05:52:54,513 [wrapper] ==== wrapper stderr END ====
[2025-10-08 01:52:54]  *** Error codes and diagnostics ***
[2025-10-08 01:52:54]     "exeErrorCode": 0,
[2025-10-08 01:52:54]     "exeErrorDiag": "",
[2025-10-08 01:52:54]     "pilotErrorCode": 0,
[2025-10-08 01:52:54]     "pilotErrorDiag": "",
[2025-10-08 01:52:54]  *** Listing of results directory ***
[2025-10-08 01:52:54] total 390428
[2025-10-08 01:52:54] -rw-r--r--. 1 boincer umatlas      5112 Oct  5 01:02 queuedata.json
[2025-10-08 01:52:54] -rw-r--r--. 1 boincer umatlas    552446 Oct  5 01:08 pilot3.tar.gz
[2025-10-08 01:52:54] -rwx------. 1 boincer umatlas     36292 Oct  5 01:09 runpilot2-wrapper.sh
[2025-10-08 01:52:54] -rw-r--r--. 1 boincer umatlas       100 Oct  8 00:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-08 01:52:54] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  8 00:19 run_atlas
[2025-10-08 01:52:54] -rw-r--r--. 1 boincer umatlas       105 Oct  8 00:19 job.xml
[2025-10-08 01:52:54] -rw-r--r--. 2 boincer umatlas 214244475 Oct  8 00:19 EVNT.46376901._002795.pool.root.1
[2025-10-08 01:52:54] -rw-r--r--. 2 boincer umatlas     15120 Oct  8 00:19 start_atlas.sh
[2025-10-08 01:52:54] drwxrwx--x. 2 boincer umatlas      4096 Oct  8 00:19 shared
[2025-10-08 01:52:54] -rw-r--r--. 2 boincer umatlas    565601 Oct  8 00:19 input.tar.gz
[2025-10-08 01:52:54] -rw-r--r--. 1 boincer umatlas         0 Oct  8 00:19 boinc_lockfile
[2025-10-08 01:52:54] -rw-r--r--. 1 boincer umatlas      2519 Oct  8 00:19 pandaJob.out
[2025-10-08 01:52:54] -rw-------. 1 boincer umatlas    979841 Oct  8 00:20 agis_schedconf.cvmfs.json
[2025-10-08 01:52:54] -rw-------. 1 boincer umatlas   1560401 Oct  8 00:20 agis_ddmendpoints.agis.ALL.json
[2025-10-08 01:52:54] drwx------. 4 boincer umatlas      4096 Oct  8 00:20 pilot3
[2025-10-08 01:52:54] -rw-r--r--. 1 boincer umatlas      7158 Oct  8 01:45 init_data.xml
[2025-10-08 01:52:54] -rw-------. 1 boincer umatlas 179526107 Oct  8 01:51 HITS.46376905._076546.pool.root.1
[2025-10-08 01:52:54] -rw-r--r--. 1 boincer umatlas       530 Oct  8 01:51 boinc_task_state.xml
[2025-10-08 01:52:54] -rw-------. 1 boincer umatlas      1033 Oct  8 01:51 memory_monitor_summary.json
[2025-10-08 01:52:54] -rw-------. 1 boincer umatlas    345128 Oct  8 01:51 log.46376905._076546.job.log.tgz.1
[2025-10-08 01:52:54] -rw-------. 1 boincer umatlas      7778 Oct  8 01:52 heartbeat.json
[2025-10-08 01:52:54] -rw-------. 1 boincer umatlas        95 Oct  8 01:52 pilot_heartbeat.json
[2025-10-08 01:52:54] -rw-r--r--. 1 boincer umatlas      8192 Oct  8 01:52 boinc_mmap_file
[2025-10-08 01:52:54] -rw-r--r--. 1 boincer umatlas        27 Oct  8 01:52 wrapper_checkpoint.txt
[2025-10-08 01:52:54] -rw-------. 1 boincer umatlas      4896 Oct  8 01:52 pilotlog.txt
[2025-10-08 01:52:54] -rw-------. 1 boincer umatlas    725590 Oct  8 01:52 log.46376905._076546.job.log.1
[2025-10-08 01:52:54] -rw-------. 1 boincer umatlas       357 Oct  8 01:52 output.list
[2025-10-08 01:52:54] -rw-r--r--. 1 boincer umatlas       620 Oct  8 01:52 runtime_log
[2025-10-08 01:52:54] -rw-------. 1 boincer umatlas   1085440 Oct  8 01:52 result.tar.gz
[2025-10-08 01:52:54] -rw-------. 1 boincer umatlas       650 Oct  8 01:52 tURLDmaBWP8n9Rq4apOajLDm4fhM0noT9bVof3QYDmlKFMDm8pE7Bn.diag
[2025-10-08 01:52:54] -rw-r--r--. 1 boincer umatlas      8693 Oct  8 01:52 runtime_log.err
[2025-10-08 01:52:54] -rw-r--r--. 1 boincer umatlas     22278 Oct  8 01:52 stderr.txt
[2025-10-08 01:52:54] HITS file was successfully produced:
[2025-10-08 01:52:54] -rw-------. 1 boincer umatlas 179526107 Oct  8 01:51 shared/HITS.pool.root.1
[2025-10-08 01:52:54]  *** Contents of shared directory: ***
[2025-10-08 01:52:54] total 386180
[2025-10-08 01:52:54] -rw-r--r--. 2 boincer umatlas 214244475 Oct  8 00:19 ATLAS.root_0
[2025-10-08 01:52:54] -rw-r--r--. 2 boincer umatlas     15120 Oct  8 00:19 start_atlas.sh
[2025-10-08 01:52:54] -rw-r--r--. 2 boincer umatlas    565601 Oct  8 00:19 input.tar.gz
[2025-10-08 01:52:54] -rw-------. 1 boincer umatlas 179526107 Oct  8 01:51 HITS.pool.root.1
[2025-10-08 01:52:54] -rw-------. 1 boincer umatlas   1085440 Oct  8 01:52 result.tar.gz
01:52:56 (1252166): run_atlas exited; CPU time 20175.548048
01:52:56 (1252166): called boinc_finish(0)

</stderr_txt>
]]>

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