Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
00:18:35 (4856): wrapper (7.7.26015): starting
00:18:35 (4856): wrapper: running run_atlas (--nthreads 12)
[2025-10-08 00:18:35] Arguments: --nthreads 12
[2025-10-08 00:18:35] Threads: 12
[2025-10-08 00:18:35] Checking for CVMFS
[2025-10-08 00:18:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 00:18:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 00:18:35] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 00:18:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 00:18:35] 2.11.2.0 2913 216632 101552 151458 2 1 19167594 20275200 1 130560 1 103421945 99.984 13114944 12393 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-08 00:18:35] CVMFS is ok
[2025-10-08 00:18:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-08 00:18:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-08 00:18:35] Further information can be found at the LHC@home message board.
[2025-10-08 00:18:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 00:18:35] Checking for apptainer binary...
[2025-10-08 00:18:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 00:18:35] Running /usr/bin/apptainer --version
[2025-10-08 00:18:35] apptainer version 1.3.2-1.el7
[2025-10-08 00:18:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 00:18:37] c-205-6.aglt2.org
[2025-10-08 00:18:37] apptainer works
[2025-10-08 00:18:37] Set ATHENA_PROC_NUMBER=12
[2025-10-08 00:18:37] Set ATHENA_CORE_NUMBER=12
[2025-10-08 00:18:37] Starting ATLAS job with PandaID=6830986968
[2025-10-08 00:18:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-08 01:23:15]  *** The last 200 lines of the pilot log: ***
[2025-10-08 01:23:15]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-08 01:23:15]  replicas=None
[2025-10-08 01:23:15]  scope=mc23_13p6TeV
[2025-10-08 01:23:15]  status=None
[2025-10-08 01:23:15]  status_code=0
[2025-10-08 01:23:15]  storage_token=
[2025-10-08 01:23:15]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6830986968/log.46376905._077752.job.log.tgz.1
[2025-10-08 01:23:15]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b1/5f/log.46376905._077752.job.log.tgz.1
[2025-10-08 01:23:15]  workdir=None
[2025-10-08 01:23:15] ]
[2025-10-08 01:23:15] 2025-10-08 05:22:36,274 | INFO     | transferring file log.46376905._077752.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6830986968/log.46376905._077752.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-08 01:23:15] 2025-10-08 05:22:36,274 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6830986968/log.46376905._077752.job.log.tgz.1 /tmp/boinchome/slots/0/log.46376905._077752.job
[2025-10-08 01:23:15] 2025-10-08 05:22:36,295 | INFO     | adding to output.list: log.46376905._077752.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b1/5f/log.46376905._077752.job.log.tg
[2025-10-08 01:23:15] 2025-10-08 05:22:36,296 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-08 01:23:15] 2025-10-08 05:22:36,297 | INFO     | summary of transferred files:
[2025-10-08 01:23:15] 2025-10-08 05:22:36,297 | INFO     |  -- lfn=log.46376905._077752.job.log.tgz.1, status_code=0, status=transferred
[2025-10-08 01:23:15] 2025-10-08 05:22:36,297 | INFO     | stage-out finished correctly
[2025-10-08 01:23:15] 2025-10-08 05:22:36,382 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-08 01:23:15] 2025-10-08 05:22:36,403 | INFO     | time since job start (3822s) is within the limit (172800.0s)
[2025-10-08 01:23:15] 2025-10-08 05:22:38,413 | INFO     | time since job start (3824s) is within the limit (172800.0s)
[2025-10-08 01:23:15] 2025-10-08 05:22:39,257 | INFO     | job 6830986968 has state=finished
[2025-10-08 01:23:15] 2025-10-08 05:22:39,257 | INFO     | preparing for final server update for job 6830986968 in state='finished'
[2025-10-08 01:23:15] 2025-10-08 05:22:39,258 | INFO     | this job has now completed (state=finished)
[2025-10-08 01:23:15] 2025-10-08 05:22:39,258 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-08 01:23:15] 2025-10-08 05:22:39,258 | INFO     | log transfer has been attempted: DONE
[2025-10-08 01:23:15] 2025-10-08 05:22:39,258 | INFO     | job 6830986968 has finished - writing final server update
[2025-10-08 01:23:15] 2025-10-08 05:22:39,259 | INFO     | total number of processed events: 400 (read)
[2025-10-08 01:23:15] 2025-10-08 05:22:39,259 | INFO     | executing command: lscpu
[2025-10-08 01:23:15] 2025-10-08 05:22:39,285 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-08 01:23:15] 2025-10-08 05:22:39,859 | WARNING  | process 15318 can no longer be monitored (due to stat problems) - aborting
[2025-10-08 01:23:15] 2025-10-08 05:22:39,859 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6830986968/memory_monitor_summary.json (trf name=prmon)
[2025-10-08 01:23:15] 2025-10-08 05:22:39,949 | INFO     | number of running child processes to parent process 15318: 1
[2025-10-08 01:23:15] 2025-10-08 05:22:39,949 | INFO     | maximum number of monitored processes: 6
[2025-10-08 01:23:15] 2025-10-08 05:22:40,419 | INFO     | time since job start (3826s) is within the limit (172800.0s)
[2025-10-08 01:23:15] 2025-10-08 05:22:42,424 | INFO     | time since job start (3828s) is within the limit (172800.0s)
[2025-10-08 01:23:15] 2025-10-08 05:22:42,452 | INFO     | monitor loop #287: job 0:6830986968 is in state 'finished'
[2025-10-08 01:23:15] 2025-10-08 05:22:42,452 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 01:23:15] 2025-10-08 05:22:43,906 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-08 01:23:15] 2025-10-08 05:22:43,909 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2025-10-08 01:23:15] 2025-10-08 05:22:43,911 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6830986968/memory_monitor_summary.json (trf name=prmon)
[2025-10-08 01:23:15] 2025-10-08 05:22:43,911 | INFO     | extracted standard info from prmon json
[2025-10-08 01:23:15] 2025-10-08 05:22:43,911 | INFO     | extracted standard memory fields from prmon json
[2025-10-08 01:23:15] 2025-10-08 05:22:43,911 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-08 01:23:15] 2025-10-08 05:22:43,912 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-08 01:23:15] 2025-10-08 05:22:43,912 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-08 01:23:15] 2025-10-08 05:22:43,913 | INFO     | fitting pss+swap vs Time
[2025-10-08 01:23:15] 2025-10-08 05:22:43,913 | INFO     | sum of square deviations: 54438230.0
[2025-10-08 01:23:15] 2025-10-08 05:22:43,914 | INFO     | sum of deviations: -1070025522.0
[2025-10-08 01:23:15] 2025-10-08 05:22:43,914 | INFO     | mean x: 1759899145.5
[2025-10-08 01:23:15] 2025-10-08 05:22:43,914 | INFO     | mean y: 2950662.6428571427
[2025-10-08 01:23:15] 2025-10-08 05:22:43,914 | INFO     | -- intersect: 34595129758.67503
[2025-10-08 01:23:15] 2025-10-08 05:22:43,914 | INFO     | intersect: 34595129758.67503
[2025-10-08 01:23:15] 2025-10-08 05:22:43,914 | INFO     | chi2: 0.036543914238098926
[2025-10-08 01:23:15] 2025-10-08 05:22:43,914 | INFO     | -- intersect: 34595129758.67503
[2025-10-08 01:23:15] 2025-10-08 05:22:43,914 | INFO     | current memory leak: -19.66 B/s (using 56 data points, chi2=0.04)
[2025-10-08 01:23:15] 2025-10-08 05:22:43,915 | INFO     | could have reported an average CPU frequency of 2043 MHz (6 samples)
[2025-10-08 01:23:15] 2025-10-08 05:22:43,915 | INFO     | ..............................
[2025-10-08 01:23:15] 2025-10-08 05:22:43,915 | INFO     | . Timing measurements:
[2025-10-08 01:23:15] 2025-10-08 05:22:43,915 | INFO     | . get job = 0 s
[2025-10-08 01:23:15] 2025-10-08 05:22:43,915 | INFO     | . initial setup = 2 s
[2025-10-08 01:23:15] 2025-10-08 05:22:43,915 | INFO     | . payload setup = 7 s
[2025-10-08 01:23:15] 2025-10-08 05:22:43,915 | INFO     | . stage-in = 0 s
[2025-10-08 01:23:15] 2025-10-08 05:22:43,915 | INFO     | . payload execution = 3794 s
[2025-10-08 01:23:15] 2025-10-08 05:22:43,916 | INFO     | . stage-out = 0 s
[2025-10-08 01:23:15] 2025-10-08 05:22:43,916 | INFO     | . log creation = 0 s
[2025-10-08 01:23:15] 2025-10-08 05:22:43,916 | INFO     | ..............................
[2025-10-08 01:23:15] 2025-10-08 05:22:43,997 | INFO     | 
[2025-10-08 01:23:15] 2025-10-08 05:22:43,997 | INFO     | job summary report
[2025-10-08 01:23:15] 2025-10-08 05:22:43,998 | INFO     | --------------------------------------------------
[2025-10-08 01:23:15] 2025-10-08 05:22:43,998 | INFO     | PanDA job id: 6830986968
[2025-10-08 01:23:15] 2025-10-08 05:22:43,998 | INFO     | task id: 46376905
[2025-10-08 01:23:15] 2025-10-08 05:22:43,998 | INFO     | errors: (none)
[2025-10-08 01:23:15] 2025-10-08 05:22:43,998 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-08 01:23:15] 2025-10-08 05:22:43,998 | INFO     | pilot state: finished 
[2025-10-08 01:23:15] 2025-10-08 05:22:43,999 | INFO     | transexitcode: 0
[2025-10-08 01:23:15] 2025-10-08 05:22:43,999 | INFO     | exeerrorcode: 0
[2025-10-08 01:23:15] 2025-10-08 05:22:43,999 | INFO     | exeerrordiag: 
[2025-10-08 01:23:15] 2025-10-08 05:22:43,999 | INFO     | exitcode: 0
[2025-10-08 01:23:15] 2025-10-08 05:22:43,999 | INFO     | exitmsg: OK
[2025-10-08 01:23:15] 2025-10-08 05:22:43,999 | INFO     | cpuconsumptiontime: 40894 s
[2025-10-08 01:23:15] 2025-10-08 05:22:44,000 | INFO     | nevents: 400
[2025-10-08 01:23:15] 2025-10-08 05:22:44,000 | INFO     | neventsw: 0
[2025-10-08 01:23:15] 2025-10-08 05:22:44,000 | INFO     | pid: 15318
[2025-10-08 01:23:15] 2025-10-08 05:22:44,000 | INFO     | pgrp: 15318
[2025-10-08 01:23:15] 2025-10-08 05:22:44,000 | INFO     | corecount: 12
[2025-10-08 01:23:15] 2025-10-08 05:22:44,000 | INFO     | event service: False
[2025-10-08 01:23:15] 2025-10-08 05:22:44,001 | INFO     | sizes: {0: 2348644, 1: 2348843, 6: 2349105, 11: 2349133, 3805: 2374912, 3806: 2383910, 3807: 2384094, 3814: 2384288}
[2025-10-08 01:23:15] 2025-10-08 05:22:44,001 | INFO     | --------------------------------------------------
[2025-10-08 01:23:15] 2025-10-08 05:22:44,001 | INFO     | 
[2025-10-08 01:23:15] 2025-10-08 05:22:44,001 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-08 01:23:15] 2025-10-08 05:22:44,023 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-08 01:23:15] 2025-10-08 05:22:44,023 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-08 01:23:15] 2025-10-08 05:22:44,023 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-08 01:23:15] 2025-10-08 05:22:44,024 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-08 01:23:15] 2025-10-08 05:22:44,024 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-08 01:23:15] 2025-10-08 05:22:44,024 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-08 01:23:15] 2025-10-08 05:22:44,024 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-08 01:23:15] 2025-10-08 05:22:44,024 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-08 01:23:15] 2025-10-08 05:22:44,024 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-08 01:23:15] 2025-10-08 05:22:44,025 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-08 01:23:15] 2025-10-08 05:22:44,025 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-08 01:23:15] 2025-10-08 05:22:44,025 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-08 01:23:15] 2025-10-08 05:22:44,025 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-08 01:23:15] 2025-10-08 05:22:44,025 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-08 01:23:15] 2025-10-08 05:22:44,025 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-08 01:23:15] 2025-10-08 05:22:44,026 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-08 01:23:15] 2025-10-08 05:22:44,026 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-08 01:23:15] 2025-10-08 05:22:44,026 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-08 01:23:15] 2025-10-08 05:22:44,026 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-08 01:23:15] 2025-10-08 05:22:44,026 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-08 01:23:15] 2025-10-08 05:22:44,026 | INFO     | job 6830986968 has completed (purged errors)
[2025-10-08 01:23:15] 2025-10-08 05:22:44,027 | INFO     | overall cleanup function is called
[2025-10-08 01:23:15] 2025-10-08 05:22:45,035 | INFO     | --- collectZombieJob: --- 10, [15318]
[2025-10-08 01:23:15] 2025-10-08 05:22:45,035 | INFO     | zombie collector waiting for pid 15318
[2025-10-08 01:23:15] 2025-10-08 05:22:45,035 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-08 01:23:15] 2025-10-08 05:22:45,035 | INFO     | collected zombie processes
[2025-10-08 01:23:15] 2025-10-08 05:22:45,035 | INFO     | will attempt to kill all subprocesses of pid=15318
[2025-10-08 01:23:15] 2025-10-08 05:22:45,124 | INFO     | process IDs to be killed: [15318] (in reverse order)
[2025-10-08 01:23:15] 2025-10-08 05:22:45,175 | WARNING  | found no corresponding commands to process id(s)
[2025-10-08 01:23:15] 2025-10-08 05:22:45,175 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-08 01:23:15] 2025-10-08 05:22:45,179 | INFO     | did not find any defunct processes belonging to 15318
[2025-10-08 01:23:15] 2025-10-08 05:22:45,181 | INFO     | did not find any defunct processes belonging to 15318
[2025-10-08 01:23:15] 2025-10-08 05:22:45,181 | INFO     | ready for new job
[2025-10-08 01:23:15] 2025-10-08 05:22:45,182 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-08 01:23:15] 2025-10-08 05:22:45,183 | INFO     | ***************************************
[2025-10-08 01:23:15] 2025-10-08 05:22:45,183 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-08 01:23:15] 2025-10-08 05:22:45,183 | INFO     | ***************************************
[2025-10-08 01:23:15] 2025-10-08 05:22:45,183 | INFO     | 
[2025-10-08 01:23:15] 2025-10-08 05:22:45,183 | INFO     | architecture information:
[2025-10-08 01:23:15] 2025-10-08 05:22:45,184 | INFO     | executing command: cat /etc/os-release
[2025-10-08 01:23:15] 2025-10-08 05:22:45,198 | INFO     | cat /etc/os-release:
[2025-10-08 01:23:15] NAME="CentOS Linux"
[2025-10-08 01:23:15] VERSION="7 (Core)"
[2025-10-08 01:23:15] ID="centos"
[2025-10-08 01:23:15] ID_LIKE="rhel fedora"
[2025-10-08 01:23:15] VERSION_ID="7"
[2025-10-08 01:23:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-08 01:23:15] ANSI_COLOR="0;31"
[2025-10-08 01:23:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-08 01:23:15] HOME_URL="https://www.centos.org/"
[2025-10-08 01:23:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-08 01:23:15] 
[2025-10-08 01:23:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-08 01:23:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-08 01:23:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-08 01:23:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-08 01:23:15] 
[2025-10-08 01:23:15] 2025-10-08 05:22:45,199 | INFO     | ***************************************
[2025-10-08 01:23:15] 2025-10-08 05:22:45,702 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-08 01:23:15] 2025-10-08 05:22:45,718 | INFO     | sufficient remaining disk space (29398925312 B)
[2025-10-08 01:23:15] 2025-10-08 05:22:45,719 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-08 01:23:15] 2025-10-08 05:22:45,719 | INFO     | current server update state: UPDATING_FINAL
[2025-10-08 01:23:15] 2025-10-08 05:22:45,719 | INFO     | update_server=False
[2025-10-08 01:23:15] 2025-10-08 05:22:45,719 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-08 01:23:15] 2025-10-08 05:22:45,720 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-08 01:23:15] 2025-10-08 05:22:45,881 | INFO     | all data control threads have been joined
[2025-10-08 01:23:15] 2025-10-08 05:22:45,960 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-08 01:23:15] 2025-10-08 05:22:45,960 | INFO     | aborting loop
[2025-10-08 01:23:15] 2025-10-08 05:22:46,362 | INFO     | all payload control threads have been joined
[2025-10-08 01:23:15] 2025-10-08 05:22:46,725 | INFO     | [job] retrieve thread has finished
[2025-10-08 01:23:15] 2025-10-08 05:22:46,725 | INFO     | [job] queue monitor thread has finished
[2025-10-08 01:23:15] 2025-10-08 05:22:46,744 | INFO     | [payload] failed_post thread has finished
[2025-10-08 01:23:15] 2025-10-08 05:22:46,873 | INFO     | all job control threads have been joined
[2025-10-08 01:23:15] 2025-10-08 05:22:46,886 | INFO     | [data] control thread has finished
[2025-10-08 01:23:15] 2025-10-08 05:22:46,896 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-08 01:23:15] 2025-10-08 05:22:46,965 | INFO     | [job] job monitor thread has finished
[2025-10-08 01:23:15] 2025-10-08 05:22:46,973 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-08 01:23:15] 2025-10-08 05:22:47,132 | INFO     | [payload] validate_post thread has finished
[2025-10-08 01:23:15] 2025-10-08 05:22:47,247 | INFO     | [job] validate thread has finished
[2025-10-08 01:23:15] 2025-10-08 05:22:47,366 | INFO     | [payload] control thread has finished
[2025-10-08 01:23:15] 2025-10-08 05:22:47,619 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-08 01:23:15] 2025-10-08 05:22:47,687 | INFO     | [job] create_data_payload thread has finished
[2025-10-08 01:23:15] 2025-10-08 05:22:47,733 | INFO     | [payload] validate_pre thread has finished
[2025-10-08 01:23:15] 2025-10-08 05:22:47,753 | INFO     | [payload] execute_payloads thread has finished
[2025-10-08 01:23:15] 2025-10-08 05:22:47,879 | INFO     | [job] control thread has finished
[2025-10-08 01:23:15] 2025-10-08 05:22:48,139 | INFO     | [data] copytool_in thread has finished
[2025-10-08 01:23:15] 2025-10-08 05:22:48,901 | INFO     | [data] copytool_out thread has finished
[2025-10-08 01:23:15] 2025-10-08 05:22:50,978 | INFO     | [data] queue_monitor thread has finished
[2025-10-08 01:23:15] 2025-10-08 05:22:59,538 | INFO     | [monitor] cgroup control has ended
[2025-10-08 01:23:15] 2025-10-08 05:23:00,932 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139668039657280)>', '<ExcThread(monitor, started 139667739490048)>']
[2025-10-08 01:23:15] 2025-10-08 05:23:05,933 | INFO     | all workflow threads have been joined
[2025-10-08 01:23:15] 2025-10-08 05:23:05,933 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-08 01:23:15] 2025-10-08 05:23:05,933 | INFO     | traces error code: 0
[2025-10-08 01:23:15] 2025-10-08 05:23:05,934 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-08 01:23:15] 2025-10-08 05:23:15,631 | INFO     | PID=8907 has CPU usage=3.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-10-08 01:23:15] 2025-10-08 05:23:15,632 | INFO     | found 0 job(s) in 20 queues
[2025-10-08 01:23:15] 2025-10-08 05:23:15,632 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-08 01:23:15] 2025-10-08 05:23:15,632 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-08 01:23:15] 2025-10-08 05:23:15,632 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-08 01:23:15] 2025-10-08 05:23:15,632 | INFO     | [monitor] control thread has ended
[2025-10-08 01:23:15] 2025-10-08 05:23:15,720 [wrapper] ==== pilot stdout END ====
[2025-10-08 01:23:15] 2025-10-08 05:23:15,723 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-08 01:23:15] 2025-10-08 05:23:15,727 [wrapper] pilotpid: 8907
[2025-10-08 01:23:15] 2025-10-08 05:23:15,731 [wrapper] Pilot exit status: 0
[2025-10-08 01:23:15] 2025-10-08 05:23:15,747 [wrapper] pandaids: 6830986968
[2025-10-08 01:23:15] 2025-10-08 05:23:15,789 [wrapper] cleanup supervisor_pilot 26250 8908
[2025-10-08 01:23:15] 2025-10-08 05:23:15,793 [wrapper] Test setup, not cleaning
[2025-10-08 01:23:15] 2025-10-08 05:23:15,797 [wrapper] apfmon messages muted
[2025-10-08 01:23:15] 2025-10-08 05:23:15,801 [wrapper] ==== wrapper stdout END ====
[2025-10-08 01:23:15] 2025-10-08 05:23:15,804 [wrapper] ==== wrapper stderr END ====
[2025-10-08 01:23:15]  *** Error codes and diagnostics ***
[2025-10-08 01:23:15]     "exeErrorCode": 0,
[2025-10-08 01:23:15]     "exeErrorDiag": "",
[2025-10-08 01:23:15]     "pilotErrorCode": 0,
[2025-10-08 01:23:15]     "pilotErrorDiag": "",
[2025-10-08 01:23:15]  *** Listing of results directory ***
[2025-10-08 01:23:15] total 386124
[2025-10-08 01:23:15] -rw-r--r-- 1 boincer umatlas    552446 Oct  5 02:00 pilot3.tar.gz
[2025-10-08 01:23:15] -rw-r--r-- 1 boincer umatlas      5112 Oct  5 02:11 queuedata.json
[2025-10-08 01:23:15] -rwx------ 1 boincer umatlas     36292 Oct  5 02:12 runpilot2-wrapper.sh
[2025-10-08 01:23:15] -rw-r--r-- 1 boincer umatlas       100 Oct  8 00:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-08 01:23:15] -rwxr-xr-x 1 boincer umatlas      7986 Oct  8 00:18 run_atlas
[2025-10-08 01:23:15] -rw-r--r-- 1 boincer umatlas       105 Oct  8 00:18 job.xml
[2025-10-08 01:23:15] -rw-r--r-- 2 boincer umatlas 211910904 Oct  8 00:18 EVNT.46376901._002842.pool.root.1
[2025-10-08 01:23:15] -rw-r--r-- 2 boincer umatlas     15120 Oct  8 00:18 start_atlas.sh
[2025-10-08 01:23:15] drwxrwx--x 2 boincer umatlas      4096 Oct  8 00:18 shared
[2025-10-08 01:23:15] -rw-r--r-- 2 boincer umatlas    565603 Oct  8 00:18 input.tar.gz
[2025-10-08 01:23:15] -rw-r--r-- 1 boincer umatlas         0 Oct  8 00:18 boinc_lockfile
[2025-10-08 01:23:15] -rw-r--r-- 1 boincer umatlas      2518 Oct  8 00:18 pandaJob.out
[2025-10-08 01:23:15] -rw------- 1 boincer umatlas    979841 Oct  8 00:18 agis_schedconf.cvmfs.json
[2025-10-08 01:23:15] -rw------- 1 boincer umatlas   1560401 Oct  8 00:18 agis_ddmendpoints.agis.ALL.json
[2025-10-08 01:23:15] drwx------ 4 boincer umatlas      4096 Oct  8 00:18 pilot3
[2025-10-08 01:23:15] -rw-r--r-- 1 boincer umatlas      5952 Oct  8 01:19 init_data.xml
[2025-10-08 01:23:15] -rw------- 1 boincer umatlas 177704329 Oct  8 01:22 HITS.46376905._077752.pool.root.1
[2025-10-08 01:23:15] -rw-r--r-- 1 boincer umatlas       530 Oct  8 01:22 boinc_task_state.xml
[2025-10-08 01:23:15] -rw------- 1 boincer umatlas      1048 Oct  8 01:22 memory_monitor_summary.json
[2025-10-08 01:23:15] -rw------- 1 boincer umatlas    378534 Oct  8 01:22 log.46376905._077752.job.log.tgz.1
[2025-10-08 01:23:15] -rw------- 1 boincer umatlas        95 Oct  8 01:22 pilot_heartbeat.json
[2025-10-08 01:23:15] -rw------- 1 boincer umatlas      7846 Oct  8 01:22 heartbeat.json
[2025-10-08 01:23:15] -rw-r--r-- 1 boincer umatlas      8192 Oct  8 01:23 boinc_mmap_file
[2025-10-08 01:23:15] -rw-r--r-- 1 boincer umatlas        27 Oct  8 01:23 wrapper_checkpoint.txt
[2025-10-08 01:23:15] -rw------- 1 boincer umatlas       744 Oct  8 01:23 pilotlog.txt
[2025-10-08 01:23:15] -rw------- 1 boincer umatlas    562198 Oct  8 01:23 log.46376905._077752.job.log.1
[2025-10-08 01:23:15] -rw------- 1 boincer umatlas       357 Oct  8 01:23 output.list
[2025-10-08 01:23:15] -rw-r--r-- 1 boincer umatlas       620 Oct  8 01:23 runtime_log
[2025-10-08 01:23:15] -rw------- 1 boincer umatlas    962560 Oct  8 01:23 result.tar.gz
[2025-10-08 01:23:15] -rw------- 1 boincer umatlas       658 Oct  8 01:23 tdmKDmTAXP8n9Rq4apOajLDm4fhM0noT9bVof3QYDmPTFMDmDaAKmn.diag
[2025-10-08 01:23:15] -rw-r--r-- 1 boincer umatlas      8700 Oct  8 01:23 runtime_log.err
[2025-10-08 01:23:15] -rw-r--r-- 1 boincer umatlas     21881 Oct  8 01:23 stderr.txt
[2025-10-08 01:23:15] HITS file was successfully produced:
[2025-10-08 01:23:15] -rw------- 1 boincer umatlas 177704329 Oct  8 01:22 shared/HITS.pool.root.1
[2025-10-08 01:23:15]  *** Contents of shared directory: ***
[2025-10-08 01:23:15] total 382008
[2025-10-08 01:23:15] -rw-r--r-- 2 boincer umatlas 211910904 Oct  8 00:18 ATLAS.root_0
[2025-10-08 01:23:15] -rw-r--r-- 2 boincer umatlas     15120 Oct  8 00:18 start_atlas.sh
[2025-10-08 01:23:15] -rw-r--r-- 2 boincer umatlas    565603 Oct  8 00:18 input.tar.gz
[2025-10-08 01:23:15] -rw------- 1 boincer umatlas 177704329 Oct  8 01:22 HITS.pool.root.1
[2025-10-08 01:23:15] -rw------- 1 boincer umatlas    962560 Oct  8 01:23 result.tar.gz
01:23:17 (4856): run_atlas exited; CPU time 40865.040893
01:23:17 (4856): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN