Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:18:26 (264422): wrapper (7.7.26015): starting
00:18:26 (264422): wrapper: running run_atlas (--nthreads 8)
[2025-10-08 00:18:26] Arguments: --nthreads 8
[2025-10-08 00:18:26] Threads: 8
[2025-10-08 00:18:26] Checking for CVMFS
[2025-10-08 00:18:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 00:18:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 00:18:27] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 00:18:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 00:18:27] 2.13.2.0 1270615 123011 611304 151458 2 17 13618720 21042176 20045 16776704 0 70847963 99.342 113307777 29710 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-10-08 00:18:27] CVMFS is ok
[2025-10-08 00:18:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-08 00:18:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-08 00:18:27] Further information can be found at the LHC@home message board.
[2025-10-08 00:18:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 00:18:27] Checking for apptainer binary...
[2025-10-08 00:18:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 00:18:27] Running /usr/bin/apptainer --version
[2025-10-08 00:18:27] apptainer version 1.4.2-1.el9
[2025-10-08 00:18:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 00:18:27] c-16-12.aglt2.org
[2025-10-08 00:18:27] apptainer works
[2025-10-08 00:18:27] Set ATHENA_PROC_NUMBER=8
[2025-10-08 00:18:27] Set ATHENA_CORE_NUMBER=8
[2025-10-08 00:18:27] Starting ATLAS job with PandaID=6832859134
[2025-10-08 00:18:27] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-08 17:24:41]  *** The last 200 lines of the pilot log: ***
[2025-10-08 17:24:41] 2025-10-08 21:23:36,915 | INFO     | time since job start (61392s) is within the limit (172800.0s)
[2025-10-08 17:24:41] 2025-10-08 21:23:36,966 | INFO     | found 20 cores (10 cores per socket, 2 sockets) HT, CPU MHz: 2900.108924999998
[2025-10-08 17:24:41] 2025-10-08 21:23:37,110 | INFO     | using path: /tmp/boinchome/slots/2/PanDA_Pilot-6832859134/memory_monitor_summary.json (trf name=prmon)
[2025-10-08 17:24:41] 2025-10-08 21:23:37,112 | INFO     | extracted standard info from prmon json
[2025-10-08 17:24:41] 2025-10-08 21:23:37,112 | INFO     | extracted standard memory fields from prmon json
[2025-10-08 17:24:41] 2025-10-08 21:23:37,112 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-08 17:24:41] 2025-10-08 21:23:37,113 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-08 17:24:41] 2025-10-08 21:23:37,113 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-08 17:24:41] 2025-10-08 21:23:37,478 | INFO     | fitting pss+swap vs Time
[2025-10-08 17:24:41] 2025-10-08 21:23:37,501 | INFO     | sum of square deviations: 311935640753.47266
[2025-10-08 17:24:41] 2025-10-08 21:23:37,805 | INFO     | sum of deviations: -114865566752.3411
[2025-10-08 17:24:41] 2025-10-08 21:23:37,806 | INFO     | mean x: 1759927988.1856287
[2025-10-08 17:24:41] 2025-10-08 21:23:37,806 | INFO     | mean y: 2063191.6846307386
[2025-10-08 17:24:41] 2025-10-08 21:23:37,806 | INFO     | -- intersect: 650129970.1968555
[2025-10-08 17:24:41] 2025-10-08 21:23:37,848 | INFO     | intersect: 650129970.1968555
[2025-10-08 17:24:41] 2025-10-08 21:23:37,849 | INFO     | chi2: 8.019609722570738
[2025-10-08 17:24:41] 2025-10-08 21:23:37,851 | INFO     | sum of square deviations: 307289486834.0823
[2025-10-08 17:24:41] 2025-10-08 21:23:38,115 | INFO     | monitor loop #2833: job 0:6832859134 is in state 'finished'
[2025-10-08 17:24:41] 2025-10-08 21:23:38,115 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 17:24:41] 2025-10-08 21:23:38,180 | INFO     | sum of deviations: 46380607760.86262
[2025-10-08 17:24:41] 2025-10-08 21:23:38,195 | INFO     | mean x: 1759927835.6930792
[2025-10-08 17:24:41] 2025-10-08 21:23:38,195 | INFO     | mean y: 2068474.8786359078
[2025-10-08 17:24:41] 2025-10-08 21:23:38,195 | INFO     | -- intersect: -263565483.10567337
[2025-10-08 17:24:41] 2025-10-08 21:23:38,195 | INFO     | intersect: -263565483.10567337
[2025-10-08 17:24:41] 2025-10-08 21:23:38,197 | INFO     | chi2: 6.0601809076528905
[2025-10-08 17:24:41] 2025-10-08 21:23:38,197 | INFO     | current chi2=6.0601809076528905 (change=24.432969716757487 %)
[2025-10-08 17:24:41] 2025-10-08 21:23:38,197 | INFO     | right removable region: 996
[2025-10-08 17:24:41] 2025-10-08 21:23:38,249 | INFO     | sum of square deviations: 307288517541.6937
[2025-10-08 17:24:41] 2025-10-08 21:23:38,630 | INFO     | sum of deviations: -369789428593.4702
[2025-10-08 17:24:41] 2025-10-08 21:23:38,630 | INFO     | mean x: 1759928140.6940823
[2025-10-08 17:24:41] 2025-10-08 21:23:38,631 | INFO     | mean y: 2071554.0050150452
[2025-10-08 17:24:41] 2025-10-08 21:23:38,631 | INFO     | -- intersect: 2119960067.1172254
[2025-10-08 17:24:41] 2025-10-08 21:23:38,631 | INFO     | intersect: 2119960067.1172254
[2025-10-08 17:24:41] 2025-10-08 21:23:38,632 | INFO     | chi2: 4.5653113040679445
[2025-10-08 17:24:41] 2025-10-08 21:23:38,633 | INFO     | current chi2=4.5653113040679445 (change=43.07314866932821 %)
[2025-10-08 17:24:41] 2025-10-08 21:23:38,677 | INFO     | sum of square deviations: 302687888809.0803
[2025-10-08 17:24:41] 2025-10-08 21:23:38,817 | INFO     | sum of deviations: -485571435437.56946
[2025-10-08 17:24:41] 2025-10-08 21:23:38,878 | INFO     | mean x: 1759928293.200605
[2025-10-08 17:24:41] 2025-10-08 21:23:38,878 | INFO     | mean y: 2075388.6159274194
[2025-10-08 17:24:41] 2025-10-08 21:23:38,878 | INFO     | -- intersect: 2825349590.1669116
[2025-10-08 17:24:41] 2025-10-08 21:23:38,878 | INFO     | intersect: 2825349590.1669116
[2025-10-08 17:24:41] 2025-10-08 21:23:38,887 | INFO     | chi2: 3.763111641443298
[2025-10-08 17:24:41] 2025-10-08 21:23:38,888 | INFO     | current chi2=3.763111641443298 (change=17.571631137395656 %)
[2025-10-08 17:24:41] 2025-10-08 21:23:38,888 | INFO     | left removable region: 20
[2025-10-08 17:24:41] 2025-10-08 21:23:38,889 | INFO     | sum of square deviations: 288275822046.1967
[2025-10-08 17:24:41] 2025-10-08 21:23:39,076 | INFO     | time since job start (61395s) is within the limit (172800.0s)
[2025-10-08 17:24:41] 2025-10-08 21:23:39,109 | INFO     | sum of deviations: -321453070076.31104
[2025-10-08 17:24:41] 2025-10-08 21:23:39,109 | INFO     | mean x: 1759928415.2213116
[2025-10-08 17:24:41] 2025-10-08 21:23:39,109 | INFO     | mean y: 2081113.899590164
[2025-10-08 17:24:41] 2025-10-08 21:23:39,110 | INFO     | -- intersect: 1964557148.7325332
[2025-10-08 17:24:41] 2025-10-08 21:23:39,110 | INFO     | intersect: 1964557148.7325332
[2025-10-08 17:24:41] 2025-10-08 21:23:39,115 | INFO     | chi2: 1.5800637225800975
[2025-10-08 17:24:41] 2025-10-08 21:23:39,116 | INFO     | -- intersect: 1964557148.7325332
[2025-10-08 17:24:41] 2025-10-08 21:23:39,116 | INFO     | current memory leak: -1.12 B/s (using 976 data points, chi2=1.58)
[2025-10-08 17:24:41] 2025-10-08 21:23:39,117 | INFO     | could have reported an average CPU frequency of 2900 MHz (36 samples)
[2025-10-08 17:24:41] 2025-10-08 21:23:39,117 | INFO     | ..............................
[2025-10-08 17:24:41] 2025-10-08 21:23:39,117 | INFO     | . Timing measurements:
[2025-10-08 17:24:41] 2025-10-08 21:23:39,118 | INFO     | . get job = 0 s
[2025-10-08 17:24:41] 2025-10-08 21:23:39,118 | INFO     | . initial setup = 7 s
[2025-10-08 17:24:41] 2025-10-08 21:23:39,118 | INFO     | . payload setup = 72 s
[2025-10-08 17:24:41] 2025-10-08 21:23:39,118 | INFO     | . stage-in = 0 s
[2025-10-08 17:24:41] 2025-10-08 21:23:39,118 | INFO     | . payload execution = 61131 s
[2025-10-08 17:24:41] 2025-10-08 21:23:39,118 | INFO     | . stage-out = 21 s
[2025-10-08 17:24:41] 2025-10-08 21:23:39,118 | INFO     | . log creation = 3 s
[2025-10-08 17:24:41] 2025-10-08 21:23:39,120 | INFO     | ..............................
[2025-10-08 17:24:41] 2025-10-08 21:23:39,733 | INFO     | 
[2025-10-08 17:24:41] 2025-10-08 21:23:39,733 | INFO     | job summary report
[2025-10-08 17:24:41] 2025-10-08 21:23:39,733 | INFO     | --------------------------------------------------
[2025-10-08 17:24:41] 2025-10-08 21:23:39,733 | INFO     | PanDA job id: 6832859134
[2025-10-08 17:24:41] 2025-10-08 21:23:39,733 | INFO     | task id: 46376905
[2025-10-08 17:24:41] 2025-10-08 21:23:39,734 | INFO     | errors: (none)
[2025-10-08 17:24:41] 2025-10-08 21:23:39,734 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-08 17:24:41] 2025-10-08 21:23:39,734 | INFO     | pilot state: finished 
[2025-10-08 17:24:41] 2025-10-08 21:23:39,734 | INFO     | transexitcode: 0
[2025-10-08 17:24:41] 2025-10-08 21:23:39,734 | INFO     | exeerrorcode: 0
[2025-10-08 17:24:41] 2025-10-08 21:23:39,734 | INFO     | exeerrordiag: 
[2025-10-08 17:24:41] 2025-10-08 21:23:39,734 | INFO     | exitcode: 0
[2025-10-08 17:24:41] 2025-10-08 21:23:39,735 | INFO     | exitmsg: OK
[2025-10-08 17:24:41] 2025-10-08 21:23:39,735 | INFO     | cpuconsumptiontime: 73459 s
[2025-10-08 17:24:41] 2025-10-08 21:23:39,735 | INFO     | nevents: 400
[2025-10-08 17:24:41] 2025-10-08 21:23:39,735 | INFO     | neventsw: 0
[2025-10-08 17:24:41] 2025-10-08 21:23:39,735 | INFO     | pid: 281174
[2025-10-08 17:24:41] 2025-10-08 21:23:39,735 | INFO     | pgrp: 281174
[2025-10-08 17:24:41] 2025-10-08 21:23:39,735 | INFO     | corecount: 8
[2025-10-08 17:24:41] 2025-10-08 21:23:39,735 | INFO     | event service: False
[2025-10-08 17:24:41] 2025-10-08 21:23:39,736 | INFO     | sizes: {0: 2347992, 1: 2348593, 2: 2348705, 3: 2348904, 14: 2348904, 25: 2348932, 37: 2349088, 48: 2349116, 58: 2349406, 61: 2349434, 61206: 2399997, 61229: 240899
[2025-10-08 17:24:41] 2025-10-08 21:23:39,736 | INFO     | --------------------------------------------------
[2025-10-08 17:24:41] 2025-10-08 21:23:39,736 | INFO     | 
[2025-10-08 17:24:41] 2025-10-08 21:23:39,736 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-10-08 17:24:41] 2025-10-08 21:23:39,920 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-08 17:24:41] 2025-10-08 21:23:39,920 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-08 17:24:41] 2025-10-08 21:23:39,920 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-08 17:24:41] 2025-10-08 21:23:39,920 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-08 17:24:41] 2025-10-08 21:23:39,921 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-08 17:24:41] 2025-10-08 21:23:39,921 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-08 17:24:41] 2025-10-08 21:23:39,921 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-08 17:24:41] 2025-10-08 21:23:39,921 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-08 17:24:41] 2025-10-08 21:23:39,921 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-08 17:24:41] 2025-10-08 21:23:39,921 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-08 17:24:41] 2025-10-08 21:23:39,926 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-08 17:24:41] 2025-10-08 21:23:39,926 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-08 17:24:41] 2025-10-08 21:23:39,926 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-08 17:24:41] 2025-10-08 21:23:39,926 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-08 17:24:41] 2025-10-08 21:23:39,926 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-08 17:24:41] 2025-10-08 21:23:39,926 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-08 17:24:41] 2025-10-08 21:23:39,927 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-08 17:24:41] 2025-10-08 21:23:39,927 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-08 17:24:41] 2025-10-08 21:23:39,927 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-08 17:24:41] 2025-10-08 21:23:39,927 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-08 17:24:41] 2025-10-08 21:23:39,927 | INFO     | job 6832859134 has completed (purged errors)
[2025-10-08 17:24:41] 2025-10-08 21:23:39,928 | INFO     | overall cleanup function is called
[2025-10-08 17:24:41] 2025-10-08 21:23:41,016 | INFO     | --- collectZombieJob: --- 10, [281174]
[2025-10-08 17:24:41] 2025-10-08 21:23:41,016 | INFO     | zombie collector waiting for pid 281174
[2025-10-08 17:24:41] 2025-10-08 21:23:41,016 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-08 17:24:41] 2025-10-08 21:23:41,016 | INFO     | collected zombie processes
[2025-10-08 17:24:41] 2025-10-08 21:23:41,017 | INFO     | will attempt to kill all subprocesses of pid=281174
[2025-10-08 17:24:41] 2025-10-08 21:23:43,846 | INFO     | process IDs to be killed: [281174] (in reverse order)
[2025-10-08 17:24:41] 2025-10-08 21:23:45,325 | WARNING  | found no corresponding commands to process id(s)
[2025-10-08 17:24:41] 2025-10-08 21:23:45,326 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-08 17:24:41] 2025-10-08 21:23:45,616 | INFO     | did not find any defunct processes belonging to 281174
[2025-10-08 17:24:41] 2025-10-08 21:23:45,765 | INFO     | did not find any defunct processes belonging to 281174
[2025-10-08 17:24:41] 2025-10-08 21:23:45,814 | INFO     | ready for new job
[2025-10-08 17:24:41] 2025-10-08 21:23:45,814 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-08 17:24:41] 2025-10-08 21:23:45,818 | INFO     | ***************************************
[2025-10-08 17:24:41] 2025-10-08 21:23:45,818 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-08 17:24:41] 2025-10-08 21:23:45,819 | INFO     | ***************************************
[2025-10-08 17:24:41] 2025-10-08 21:23:45,819 | INFO     | 
[2025-10-08 17:24:41] 2025-10-08 21:23:45,833 | INFO     | architecture information:
[2025-10-08 17:24:41] 2025-10-08 21:23:45,838 | INFO     | executing command: cat /etc/os-release
[2025-10-08 17:24:41] 2025-10-08 21:23:46,047 | INFO     | cat /etc/os-release:
[2025-10-08 17:24:41] NAME="CentOS Linux"
[2025-10-08 17:24:41] VERSION="7 (Core)"
[2025-10-08 17:24:41] ID="centos"
[2025-10-08 17:24:41] ID_LIKE="rhel fedora"
[2025-10-08 17:24:41] VERSION_ID="7"
[2025-10-08 17:24:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-08 17:24:41] ANSI_COLOR="0;31"
[2025-10-08 17:24:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-08 17:24:41] HOME_URL="https://www.centos.org/"
[2025-10-08 17:24:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-08 17:24:41] 
[2025-10-08 17:24:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-08 17:24:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-08 17:24:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-08 17:24:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-08 17:24:41] 
[2025-10-08 17:24:41] 2025-10-08 21:23:46,047 | INFO     | ***************************************
[2025-10-08 17:24:41] 2025-10-08 21:23:46,552 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-10-08 17:24:41] 2025-10-08 21:23:46,617 | INFO     | sufficient remaining disk space (53334769664 B)
[2025-10-08 17:24:41] 2025-10-08 21:23:46,618 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-08 17:24:41] 2025-10-08 21:23:46,618 | INFO     | current server update state: UPDATING_FINAL
[2025-10-08 17:24:41] 2025-10-08 21:23:46,618 | INFO     | update_server=False
[2025-10-08 17:24:41] 2025-10-08 21:23:46,618 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-08 17:24:41] 2025-10-08 21:23:46,829 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-08 17:24:41] 2025-10-08 21:23:46,829 | INFO     | aborting loop
[2025-10-08 17:24:41] 2025-10-08 21:23:46,915 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-08 17:24:41] 2025-10-08 21:23:47,045 | INFO     | all job control threads have been joined
[2025-10-08 17:24:41] 2025-10-08 21:23:47,345 | INFO     | all payload control threads have been joined
[2025-10-08 17:24:41] 2025-10-08 21:23:47,515 | INFO     | all data control threads have been joined
[2025-10-08 17:24:41] 2025-10-08 21:23:47,624 | INFO     | [job] retrieve thread has finished
[2025-10-08 17:24:41] 2025-10-08 21:23:47,774 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-08 17:24:41] 2025-10-08 21:23:47,807 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-08 17:24:41] 2025-10-08 21:23:47,818 | INFO     | [payload] validate_pre thread has finished
[2025-10-08 17:24:41] 2025-10-08 21:23:47,830 | INFO     | [data] copytool_in thread has finished
[2025-10-08 17:24:41] 2025-10-08 21:23:47,840 | INFO     | [job] job monitor thread has finished
[2025-10-08 17:24:41] 2025-10-08 21:23:47,892 | INFO     | [payload] validate_post thread has finished
[2025-10-08 17:24:41] 2025-10-08 21:23:47,917 | INFO     | [job] validate thread has finished
[2025-10-08 17:24:41] 2025-10-08 21:23:47,964 | INFO     | [job] create_data_payload thread has finished
[2025-10-08 17:24:41] 2025-10-08 21:23:48,068 | INFO     | [job] control thread has finished
[2025-10-08 17:24:41] 2025-10-08 21:23:48,351 | INFO     | [payload] control thread has finished
[2025-10-08 17:24:41] 2025-10-08 21:23:48,413 | INFO     | [payload] failed_post thread has finished
[2025-10-08 17:24:41] 2025-10-08 21:23:48,521 | INFO     | [data] control thread has finished
[2025-10-08 17:24:41] 2025-10-08 21:23:48,782 | INFO     | [payload] execute_payloads thread has finished
[2025-10-08 17:24:41] 2025-10-08 21:23:48,810 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-08 17:24:41] 2025-10-08 21:23:48,931 | INFO     | [data] copytool_out thread has finished
[2025-10-08 17:24:41] 2025-10-08 21:23:49,816 | INFO     | [job] queue monitor thread has finished
[2025-10-08 17:24:41] 2025-10-08 21:23:51,811 | INFO     | [data] queue_monitor thread has finished
[2025-10-08 17:24:41] 2025-10-08 21:24:17,585 | INFO     | PID=271922 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-10-08 17:24:41] 2025-10-08 21:24:17,585 | INFO     | .. there are 34 such processes running
[2025-10-08 17:24:41] 2025-10-08 21:24:17,591 | INFO     | found 0 job(s) in 20 queues
[2025-10-08 17:24:41] 2025-10-08 21:24:17,591 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-08 17:24:41] 2025-10-08 21:24:17,591 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-08 17:24:41] 2025-10-08 21:24:31,586 | INFO     | [monitor] cgroup control has ended
[2025-10-08 17:24:41] 2025-10-08 21:24:33,672 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140453099501376)>', '<ExcThread(monitor, started 140452827207424)>']
[2025-10-08 17:24:41] 2025-10-08 21:24:33,804 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-08 17:24:41] 2025-10-08 21:24:33,804 | INFO     | [monitor] control thread has ended
[2025-10-08 17:24:41] 2025-10-08 21:24:38,698 | INFO     | all workflow threads have been joined
[2025-10-08 17:24:41] 2025-10-08 21:24:38,698 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-08 17:24:41] 2025-10-08 21:24:38,698 | INFO     | traces error code: 0
[2025-10-08 17:24:41] 2025-10-08 21:24:38,699 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-08 17:24:41] 2025-10-08 21:24:39,316 [wrapper] ==== pilot stdout END ====
[2025-10-08 17:24:41] 2025-10-08 21:24:39,439 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-08 17:24:41] 2025-10-08 21:24:39,480 [wrapper] pilotpid: 271922
[2025-10-08 17:24:41] 2025-10-08 21:24:39,551 [wrapper] Pilot exit status: 0
[2025-10-08 17:24:41] 2025-10-08 21:24:39,762 [wrapper] pandaids: 6832859134
[2025-10-08 17:24:41] 2025-10-08 21:24:40,274 [wrapper] cleanup supervisor_pilot 2835970 271923
[2025-10-08 17:24:41] 2025-10-08 21:24:40,310 [wrapper] Test setup, not cleaning
[2025-10-08 17:24:41] 2025-10-08 21:24:40,336 [wrapper] apfmon messages muted
[2025-10-08 17:24:41] 2025-10-08 21:24:40,385 [wrapper] ==== wrapper stdout END ====
[2025-10-08 17:24:41] 2025-10-08 21:24:40,420 [wrapper] ==== wrapper stderr END ====
[2025-10-08 17:24:41]  *** Error codes and diagnostics ***
[2025-10-08 17:24:41]     "exeErrorCode": 0,
[2025-10-08 17:24:41]     "exeErrorDiag": "",
[2025-10-08 17:24:41]     "pilotErrorCode": 0,
[2025-10-08 17:24:41]     "pilotErrorDiag": "",
[2025-10-08 17:24:41]  *** Listing of results directory ***
[2025-10-08 17:24:41] total 411224
[2025-10-08 17:24:41] -rw-r--r--. 1 boincer umatlas    552446 Oct  6 12:16 pilot3.tar.gz
[2025-10-08 17:24:41] -rw-r--r--. 1 boincer umatlas      5112 Oct  6 12:20 queuedata.json
[2025-10-08 17:24:41] -rwx------. 1 boincer umatlas     36292 Oct  6 12:21 runpilot2-wrapper.sh
[2025-10-08 17:24:41] -rw-r--r--. 1 boincer umatlas       100 Oct  8 00:18 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-08 17:24:41] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  8 00:18 run_atlas
[2025-10-08 17:24:41] -rw-r--r--. 1 boincer umatlas       105 Oct  8 00:18 job.xml
[2025-10-08 17:24:41] -rw-r--r--. 2 boincer umatlas 218578799 Oct  8 00:18 EVNT.46376901._004246.pool.root.1
[2025-10-08 17:24:41] -rw-r--r--. 2 boincer umatlas    565605 Oct  8 00:18 input.tar.gz
[2025-10-08 17:24:41] -rw-r--r--. 2 boincer umatlas     15120 Oct  8 00:18 start_atlas.sh
[2025-10-08 17:24:41] drwxrwx--x. 2 boincer umatlas      4096 Oct  8 00:18 shared
[2025-10-08 17:24:41] -rw-r--r--. 1 boincer umatlas         0 Oct  8 00:18 boinc_lockfile
[2025-10-08 17:24:41] -rw-r--r--. 1 boincer umatlas      2521 Oct  8 00:18 pandaJob.out
[2025-10-08 17:24:41] -rw-------. 1 boincer umatlas    979841 Oct  8 00:20 agis_schedconf.cvmfs.json
[2025-10-08 17:24:41] drwx------. 4 boincer umatlas      4096 Oct  8 00:20 pilot3
[2025-10-08 17:24:41] -rw-------. 1 boincer umatlas 183960741 Oct  8 17:19 HITS.46376905._114581.pool.root.1
[2025-10-08 17:24:41] -rw-r--r--. 1 boincer umatlas       531 Oct  8 17:19 boinc_task_state.xml
[2025-10-08 17:24:41] -rw-------. 1 boincer umatlas      1037 Oct  8 17:22 memory_monitor_summary.json
[2025-10-08 17:24:41] -rw-------. 1 boincer umatlas   1560401 Oct  8 17:22 agis_ddmendpoints.agis.ALL.json
[2025-10-08 17:24:41] -rw-------. 1 boincer umatlas    966486 Oct  8 17:22 log.46376905._114581.job.log.tgz.1
[2025-10-08 17:24:41] -rw-r--r--. 1 boincer umatlas      6524 Oct  8 17:23 init_data.xml
[2025-10-08 17:24:41] -rw-------. 1 boincer umatlas      7823 Oct  8 17:23 heartbeat.json
[2025-10-08 17:24:41] -rw-------. 1 boincer umatlas        95 Oct  8 17:24 pilot_heartbeat.json
[2025-10-08 17:24:41] -rw-------. 1 boincer umatlas      4823 Oct  8 17:24 pilotlog.txt
[2025-10-08 17:24:41] -rw-r--r--. 1 boincer umatlas      8192 Oct  8 17:24 boinc_mmap_file
[2025-10-08 17:24:41] -rw-r--r--. 1 boincer umatlas        28 Oct  8 17:24 wrapper_checkpoint.txt
[2025-10-08 17:24:41] -rw-------. 1 boincer umatlas   6368044 Oct  8 17:24 log.46376905._114581.job.log.1
[2025-10-08 17:24:41] -rw-------. 1 boincer umatlas       357 Oct  8 17:24 output.list
[2025-10-08 17:24:41] -rw-r--r--. 1 boincer umatlas       620 Oct  8 17:24 runtime_log
[2025-10-08 17:24:41] -rw-------. 1 boincer umatlas   7352320 Oct  8 17:24 result.tar.gz
[2025-10-08 17:24:41] -rw-r--r--. 1 boincer umatlas      8699 Oct  8 17:24 runtime_log.err
[2025-10-08 17:24:41] -rw-------. 1 boincer umatlas       658 Oct  8 17:24 i8IODmF92P8n9Rq4apOajLDm4fhM0noT9bVof3QYDmIYJMDmZDzRUm.diag
[2025-10-08 17:24:41] -rw-r--r--. 1 boincer umatlas     21271 Oct  8 17:24 stderr.txt
[2025-10-08 17:24:41] HITS file was successfully produced:
[2025-10-08 17:24:41] -rw-------. 1 boincer umatlas 183960741 Oct  8 17:19 shared/HITS.pool.root.1
[2025-10-08 17:24:41]  *** Contents of shared directory: ***
[2025-10-08 17:24:41] total 400864
[2025-10-08 17:24:41] -rw-r--r--. 2 boincer umatlas 218578799 Oct  8 00:18 ATLAS.root_0
[2025-10-08 17:24:41] -rw-r--r--. 2 boincer umatlas    565605 Oct  8 00:18 input.tar.gz
[2025-10-08 17:24:41] -rw-r--r--. 2 boincer umatlas     15120 Oct  8 00:18 start_atlas.sh
[2025-10-08 17:24:41] -rw-------. 1 boincer umatlas 183960741 Oct  8 17:19 HITS.pool.root.1
[2025-10-08 17:24:41] -rw-------. 1 boincer umatlas   7352320 Oct  8 17:24 result.tar.gz
17:24:42 (264422): run_atlas exited; CPU time 75827.055011
17:24:42 (264422): called boinc_finish(0)

</stderr_txt>
]]>

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