Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
00:04:35 (3088216): wrapper (7.7.26015): starting
00:04:35 (3088216): wrapper: running run_atlas (--nthreads 12)
[2025-10-08 00:04:35] Arguments: --nthreads 12
[2025-10-08 00:04:35] Threads: 12
[2025-10-08 00:04:35] Checking for CVMFS
[2025-10-08 00:04:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 00:04:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 00:04:37] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 00:04:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 00:04:39] 2.13.2.0 3327531 17080 164240 151457 2 314 22532251 39288833 12553 16776704 0 18697079 99.713 14101829 33305 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-08 00:04:39] CVMFS is ok
[2025-10-08 00:04:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-08 00:04:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-08 00:04:39] Further information can be found at the LHC@home message board.
[2025-10-08 00:04:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 00:04:39] Checking for apptainer binary...
[2025-10-08 00:04:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 00:04:39] Running /usr/bin/apptainer --version
[2025-10-08 00:04:39] apptainer version 1.4.2-1.el9
[2025-10-08 00:04:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 00:04:41] c-210-1.aglt2.org
[2025-10-08 00:04:41] apptainer works
[2025-10-08 00:04:41] Set ATHENA_PROC_NUMBER=12
[2025-10-08 00:04:41] Set ATHENA_CORE_NUMBER=12
[2025-10-08 00:04:41] Starting ATLAS job with PandaID=6832199568
[2025-10-08 00:04:41] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-08 06:41:19]  *** The last 200 lines of the pilot log: ***
[2025-10-08 06:41:19] 2025-10-08 10:40:47,070 | INFO     | chi2: 3.376078262502854
[2025-10-08 06:41:19] 2025-10-08 10:40:47,070 | INFO     | sum of square deviations: 17014470865.526365
[2025-10-08 06:41:19] 2025-10-08 10:40:47,080 | INFO     | sum of deviations: 169732851278.1842
[2025-10-08 06:41:19] 2025-10-08 10:40:47,081 | INFO     | mean x: 1759908132.3421052
[2025-10-08 06:41:19] 2025-10-08 10:40:47,081 | INFO     | mean y: 2645534.844736842
[2025-10-08 06:41:19] 2025-10-08 10:40:47,081 | INFO     | -- intersect: -17553834925.286713
[2025-10-08 06:41:19] 2025-10-08 10:40:47,081 | INFO     | intersect: -17553834925.286713
[2025-10-08 06:41:19] 2025-10-08 10:40:47,081 | INFO     | chi2: 3.3767731241539587
[2025-10-08 06:41:19] 2025-10-08 10:40:47,082 | INFO     | current chi2=3.3767731241539587 (change=-0.020581917748249946 %)
[2025-10-08 06:41:19] 2025-10-08 10:40:47,082 | INFO     | right removable region: 379
[2025-10-08 06:41:19] 2025-10-08 10:40:47,100 | INFO     | sum of square deviations: 17014136585.526367
[2025-10-08 06:41:19] 2025-10-08 10:40:47,109 | INFO     | sum of deviations: 68958809227.23683
[2025-10-08 06:41:19] 2025-10-08 10:40:47,110 | INFO     | mean x: 1759908437.3421052
[2025-10-08 06:41:19] 2025-10-08 10:40:47,110 | INFO     | mean y: 2670165.2289473685
[2025-10-08 06:41:19] 2025-10-08 10:40:47,110 | INFO     | -- intersect: -7130291861.849088
[2025-10-08 06:41:19] 2025-10-08 10:40:47,110 | INFO     | intersect: -7130291861.849088
[2025-10-08 06:41:19] 2025-10-08 10:40:47,111 | INFO     | chi2: 0.8050571783940209
[2025-10-08 06:41:19] 2025-10-08 10:40:47,111 | INFO     | current chi2=0.8050571783940209 (change=76.15407239412772 %)
[2025-10-08 06:41:19] 2025-10-08 10:40:47,111 | INFO     | sum of square deviations: 16351151669.509293
[2025-10-08 06:41:19] 2025-10-08 10:40:47,119 | INFO     | sum of deviations: 19644133060.81868
[2025-10-08 06:41:19] 2025-10-08 10:40:47,119 | INFO     | mean x: 1759908589.8586667
[2025-10-08 06:41:19] 2025-10-08 10:40:47,119 | INFO     | mean y: 2681516.317333333
[2025-10-08 06:41:19] 2025-10-08 10:40:47,119 | INFO     | -- intersect: -2111657535.318345
[2025-10-08 06:41:19] 2025-10-08 10:40:47,120 | INFO     | intersect: -2111657535.318345
[2025-10-08 06:41:19] 2025-10-08 10:40:47,120 | INFO     | chi2: 0.28115557314190537
[2025-10-08 06:41:19] 2025-10-08 10:40:47,120 | INFO     | current chi2=0.28115557314190537 (change=65.07632244174602 %)
[2025-10-08 06:41:19] 2025-10-08 10:40:47,128 | INFO     | sum of square deviations: 15705655914.272984
[2025-10-08 06:41:19] 2025-10-08 10:40:47,132 | INFO     | sum of deviations: -10539813989.272966
[2025-10-08 06:41:19] 2025-10-08 10:40:47,134 | INFO     | mean x: 1759908742.3702703
[2025-10-08 06:41:19] 2025-10-08 10:40:47,135 | INFO     | mean y: 2688635.6297297296
[2025-10-08 06:41:19] 2025-10-08 10:40:47,135 | INFO     | -- intersect: 1183735188.7902958
[2025-10-08 06:41:19] 2025-10-08 10:40:47,135 | INFO     | intersect: 1183735188.7902958
[2025-10-08 06:41:19] 2025-10-08 10:40:47,135 | INFO     | chi2: 0.0709827950173461
[2025-10-08 06:41:19] 2025-10-08 10:40:47,136 | INFO     | current chi2=0.0709827950173461 (change=74.75319652243935 %)
[2025-10-08 06:41:19] 2025-10-08 10:40:47,137 | INFO     | sum of square deviations: 15077480919.687624
[2025-10-08 06:41:19] 2025-10-08 10:40:47,152 | INFO     | sum of deviations: -9835998208.93154
[2025-10-08 06:41:19] 2025-10-08 10:40:47,152 | INFO     | mean x: 1759908894.868493
[2025-10-08 06:41:19] 2025-10-08 10:40:47,152 | INFO     | mean y: 2688463.397260274
[2025-10-08 06:41:19] 2025-10-08 10:40:47,152 | INFO     | -- intersect: 1150788787.9817083
[2025-10-08 06:41:19] 2025-10-08 10:40:47,153 | INFO     | intersect: 1150788787.9817083
[2025-10-08 06:41:19] 2025-10-08 10:40:47,153 | INFO     | chi2: 0.07084507931037952
[2025-10-08 06:41:19] 2025-10-08 10:40:47,153 | INFO     | current chi2=0.07084507931037952 (change=0.1940127983589903 %)
[2025-10-08 06:41:19] 2025-10-08 10:40:47,153 | INFO     | left removable region: 40
[2025-10-08 06:41:19] 2025-10-08 10:40:47,154 | INFO     | sum of square deviations: 12079359149.687235
[2025-10-08 06:41:19] 2025-10-08 10:40:47,180 | INFO     | sum of deviations: 2756129583.091454
[2025-10-08 06:41:19] 2025-10-08 10:40:47,180 | INFO     | mean x: 1759909321.9174042
[2025-10-08 06:41:19] 2025-10-08 10:40:47,180 | INFO     | mean y: 2683799.9675516225
[2025-10-08 06:41:19] 2025-10-08 10:40:47,180 | INFO     | -- intersect: -398872117.49356395
[2025-10-08 06:41:19] 2025-10-08 10:40:47,180 | INFO     | intersect: -398872117.49356395
[2025-10-08 06:41:19] 2025-10-08 10:40:47,181 | INFO     | chi2: 0.05555902435086318
[2025-10-08 06:41:19] 2025-10-08 10:40:47,181 | INFO     | -- intersect: -398872117.49356395
[2025-10-08 06:41:19] 2025-10-08 10:40:47,181 | INFO     | current memory leak: 0.23 B/s (using 339 data points, chi2=0.06)
[2025-10-08 06:41:19] 2025-10-08 10:40:47,182 | INFO     | could have reported an average CPU frequency of 2599 MHz (16 samples)
[2025-10-08 06:41:19] 2025-10-08 10:40:47,182 | INFO     | ..............................
[2025-10-08 06:41:19] 2025-10-08 10:40:47,182 | INFO     | . Timing measurements:
[2025-10-08 06:41:19] 2025-10-08 10:40:47,182 | INFO     | . get job = 0 s
[2025-10-08 06:41:19] 2025-10-08 10:40:47,182 | INFO     | . initial setup = 5 s
[2025-10-08 06:41:19] 2025-10-08 10:40:47,182 | INFO     | . payload setup = 61 s
[2025-10-08 06:41:19] 2025-10-08 10:40:47,183 | INFO     | . stage-in = 0 s
[2025-10-08 06:41:19] 2025-10-08 10:40:47,183 | INFO     | . payload execution = 23503 s
[2025-10-08 06:41:19] 2025-10-08 10:40:47,184 | INFO     | . stage-out = 2 s
[2025-10-08 06:41:19] 2025-10-08 10:40:47,184 | INFO     | . log creation = 0 s
[2025-10-08 06:41:19] 2025-10-08 10:40:47,184 | INFO     | ..............................
[2025-10-08 06:41:19] 2025-10-08 10:40:47,333 | INFO     | 
[2025-10-08 06:41:19] 2025-10-08 10:40:47,333 | INFO     | job summary report
[2025-10-08 06:41:19] 2025-10-08 10:40:47,333 | INFO     | --------------------------------------------------
[2025-10-08 06:41:19] 2025-10-08 10:40:47,334 | INFO     | PanDA job id: 6832199568
[2025-10-08 06:41:19] 2025-10-08 10:40:47,334 | INFO     | task id: 46376905
[2025-10-08 06:41:19] 2025-10-08 10:40:47,334 | INFO     | errors: (none)
[2025-10-08 06:41:19] 2025-10-08 10:40:47,334 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-08 06:41:19] 2025-10-08 10:40:47,334 | INFO     | pilot state: finished 
[2025-10-08 06:41:19] 2025-10-08 10:40:47,334 | INFO     | transexitcode: 0
[2025-10-08 06:41:19] 2025-10-08 10:40:47,334 | INFO     | exeerrorcode: 0
[2025-10-08 06:41:19] 2025-10-08 10:40:47,334 | INFO     | exeerrordiag: 
[2025-10-08 06:41:19] 2025-10-08 10:40:47,334 | INFO     | exitcode: 0
[2025-10-08 06:41:19] 2025-10-08 10:40:47,334 | INFO     | exitmsg: OK
[2025-10-08 06:41:19] 2025-10-08 10:40:47,334 | INFO     | cpuconsumptiontime: 44050 s
[2025-10-08 06:41:19] 2025-10-08 10:40:47,335 | INFO     | nevents: 400
[2025-10-08 06:41:19] 2025-10-08 10:40:47,335 | INFO     | neventsw: 0
[2025-10-08 06:41:19] 2025-10-08 10:40:47,335 | INFO     | pid: 3102652
[2025-10-08 06:41:19] 2025-10-08 10:40:47,335 | INFO     | pgrp: 3102652
[2025-10-08 06:41:19] 2025-10-08 10:40:47,335 | INFO     | corecount: 12
[2025-10-08 06:41:19] 2025-10-08 10:40:47,335 | INFO     | event service: False
[2025-10-08 06:41:19] 2025-10-08 10:40:47,335 | INFO     | sizes: {0: 2348639, 1: 2348667, 2: 2348838, 3: 2348866, 14: 2348894, 25: 2348922, 37: 2349078, 46: 2349368, 48: 2349396, 23568: 2384050, 23569: 2384049, 23572: 239
[2025-10-08 06:41:19] 2025-10-08 10:40:47,335 | INFO     | --------------------------------------------------
[2025-10-08 06:41:19] 2025-10-08 10:40:47,335 | INFO     | 
[2025-10-08 06:41:19] 2025-10-08 10:40:47,335 | INFO     | executing command: ls -lF /tmp/boinchome/slots/1
[2025-10-08 06:41:19] 2025-10-08 10:40:47,357 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-08 06:41:19] 2025-10-08 10:40:47,358 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-08 06:41:19] 2025-10-08 10:40:47,358 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-08 06:41:19] 2025-10-08 10:40:47,358 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-08 06:41:19] 2025-10-08 10:40:47,358 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-08 06:41:19] 2025-10-08 10:40:47,358 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-08 06:41:19] 2025-10-08 10:40:47,358 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-08 06:41:19] 2025-10-08 10:40:47,358 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-08 06:41:19] 2025-10-08 10:40:47,359 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-08 06:41:19] 2025-10-08 10:40:47,359 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-08 06:41:19] 2025-10-08 10:40:47,359 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-08 06:41:19] 2025-10-08 10:40:47,359 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-08 06:41:19] 2025-10-08 10:40:47,359 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-08 06:41:19] 2025-10-08 10:40:47,359 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-08 06:41:19] 2025-10-08 10:40:47,359 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-08 06:41:19] 2025-10-08 10:40:47,359 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-08 06:41:19] 2025-10-08 10:40:47,359 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-08 06:41:19] 2025-10-08 10:40:47,359 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-08 06:41:19] 2025-10-08 10:40:47,360 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-08 06:41:19] 2025-10-08 10:40:47,360 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-08 06:41:19] 2025-10-08 10:40:47,360 | INFO     | job 6832199568 has completed (purged errors)
[2025-10-08 06:41:19] 2025-10-08 10:40:47,360 | INFO     | overall cleanup function is called
[2025-10-08 06:41:19] 2025-10-08 10:40:48,372 | INFO     | --- collectZombieJob: --- 10, [3102652]
[2025-10-08 06:41:19] 2025-10-08 10:40:48,372 | INFO     | zombie collector waiting for pid 3102652
[2025-10-08 06:41:19] 2025-10-08 10:40:48,372 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-08 06:41:19] 2025-10-08 10:40:48,373 | INFO     | collected zombie processes
[2025-10-08 06:41:19] 2025-10-08 10:40:48,373 | INFO     | will attempt to kill all subprocesses of pid=3102652
[2025-10-08 06:41:19] 2025-10-08 10:40:48,710 | INFO     | process IDs to be killed: [3102652] (in reverse order)
[2025-10-08 06:41:19] 2025-10-08 10:40:48,785 | WARNING  | found no corresponding commands to process id(s)
[2025-10-08 06:41:19] 2025-10-08 10:40:48,786 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-08 06:41:19] 2025-10-08 10:40:48,796 | INFO     | did not find any defunct processes belonging to 3102652
[2025-10-08 06:41:19] 2025-10-08 10:40:48,804 | INFO     | did not find any defunct processes belonging to 3102652
[2025-10-08 06:41:19] 2025-10-08 10:40:48,804 | INFO     | ready for new job
[2025-10-08 06:41:19] 2025-10-08 10:40:48,804 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-08 06:41:19] 2025-10-08 10:40:48,807 | INFO     | ***************************************
[2025-10-08 06:41:19] 2025-10-08 10:40:48,807 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-08 06:41:19] 2025-10-08 10:40:48,807 | INFO     | ***************************************
[2025-10-08 06:41:19] 2025-10-08 10:40:48,807 | INFO     | 
[2025-10-08 06:41:19] 2025-10-08 10:40:48,809 | INFO     | architecture information:
[2025-10-08 06:41:19] 2025-10-08 10:40:48,809 | INFO     | executing command: cat /etc/os-release
[2025-10-08 06:41:19] 2025-10-08 10:40:48,825 | INFO     | cat /etc/os-release:
[2025-10-08 06:41:19] NAME="CentOS Linux"
[2025-10-08 06:41:19] VERSION="7 (Core)"
[2025-10-08 06:41:19] ID="centos"
[2025-10-08 06:41:19] ID_LIKE="rhel fedora"
[2025-10-08 06:41:19] VERSION_ID="7"
[2025-10-08 06:41:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-08 06:41:19] ANSI_COLOR="0;31"
[2025-10-08 06:41:19] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-08 06:41:19] HOME_URL="https://www.centos.org/"
[2025-10-08 06:41:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-08 06:41:19] 
[2025-10-08 06:41:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-08 06:41:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-08 06:41:19] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-08 06:41:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-08 06:41:19] 
[2025-10-08 06:41:19] 2025-10-08 10:40:48,826 | INFO     | ***************************************
[2025-10-08 06:41:19] 2025-10-08 10:40:49,329 | INFO     | executing command: df -mP /tmp/boinchome/slots/1
[2025-10-08 06:41:19] 2025-10-08 10:40:49,352 | INFO     | sufficient remaining disk space (53614739456 B)
[2025-10-08 06:41:19] 2025-10-08 10:40:49,352 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-08 06:41:19] 2025-10-08 10:40:49,352 | INFO     | current server update state: UPDATING_FINAL
[2025-10-08 06:41:19] 2025-10-08 10:40:49,352 | INFO     | update_server=False
[2025-10-08 06:41:19] 2025-10-08 10:40:49,352 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-08 06:41:19] 2025-10-08 10:40:49,353 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-08 06:41:19] 2025-10-08 10:40:49,357 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-08 06:41:19] 2025-10-08 10:40:49,485 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-08 06:41:19] 2025-10-08 10:40:49,485 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-08 06:41:19] 2025-10-08 10:40:49,485 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-08 06:41:19] 2025-10-08 10:40:49,485 | INFO     | will abort loop
[2025-10-08 06:41:19] 2025-10-08 10:40:49,518 | INFO     | all data control threads have been joined
[2025-10-08 06:41:19] 2025-10-08 10:40:49,796 | INFO     | all job control threads have been joined
[2025-10-08 06:41:19] 2025-10-08 10:40:50,358 | INFO     | [job] retrieve thread has finished
[2025-10-08 06:41:19] 2025-10-08 10:40:50,384 | INFO     | [job] create_data_payload thread has finished
[2025-10-08 06:41:19] 2025-10-08 10:40:50,433 | INFO     | [payload] validate_post thread has finished
[2025-10-08 06:41:19] 2025-10-08 10:40:50,492 | INFO     | [job] job monitor thread has finished
[2025-10-08 06:41:19] 2025-10-08 10:40:50,524 | INFO     | [data] control thread has finished
[2025-10-08 06:41:19] 2025-10-08 10:40:50,664 | INFO     | [data] copytool_in thread has finished
[2025-10-08 06:41:19] 2025-10-08 10:40:50,730 | INFO     | [payload] validate_pre thread has finished
[2025-10-08 06:41:19] 2025-10-08 10:40:50,754 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-08 06:41:19] 2025-10-08 10:40:50,802 | INFO     | [job] control thread has finished
[2025-10-08 06:41:19] 2025-10-08 10:40:50,837 | INFO     | all payload control threads have been joined
[2025-10-08 06:41:19] 2025-10-08 10:40:51,237 | INFO     | [payload] failed_post thread has finished
[2025-10-08 06:41:19] 2025-10-08 10:40:51,368 | INFO     | [data] copytool_out thread has finished
[2025-10-08 06:41:19] 2025-10-08 10:40:51,541 | INFO     | [job] validate thread has finished
[2025-10-08 06:41:19] 2025-10-08 10:40:51,763 | INFO     | [payload] execute_payloads thread has finished
[2025-10-08 06:41:19] 2025-10-08 10:40:51,843 | INFO     | [payload] control thread has finished
[2025-10-08 06:41:19] 2025-10-08 10:40:52,356 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-08 06:41:19] 2025-10-08 10:40:53,363 | INFO     | [data] queue_monitor thread has finished
[2025-10-08 06:41:19] 2025-10-08 10:40:53,369 | INFO     | [job] queue monitor thread has finished
[2025-10-08 06:41:19] 2025-10-08 10:40:59,143 | INFO     | [monitor] cgroup control has ended
[2025-10-08 06:41:19] 2025-10-08 10:41:01,101 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140463717766976)>', '<ExcThread(monitor, started 140462987921152)>']
[2025-10-08 06:41:19] 2025-10-08 10:41:06,127 | INFO     | all workflow threads have been joined
[2025-10-08 06:41:19] 2025-10-08 10:41:06,127 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-08 06:41:19] 2025-10-08 10:41:06,127 | INFO     | traces error code: 0
[2025-10-08 06:41:19] 2025-10-08 10:41:06,128 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-08 06:41:19] 2025-10-08 10:41:19,617 | INFO     | PID=3094764 has CPU usage=5.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-08 06:41:19] 2025-10-08 10:41:19,617 | INFO     | .. there are 13 such processes running
[2025-10-08 06:41:19] 2025-10-08 10:41:19,617 | INFO     | found 0 job(s) in 20 queues
[2025-10-08 06:41:19] 2025-10-08 10:41:19,618 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-08 06:41:19] 2025-10-08 10:41:19,618 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-08 06:41:19] 2025-10-08 10:41:19,618 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-08 06:41:19] 2025-10-08 10:41:19,618 | INFO     | [monitor] control thread has ended
[2025-10-08 06:41:19] 2025-10-08 10:41:19,749 [wrapper] ==== pilot stdout END ====
[2025-10-08 06:41:19] 2025-10-08 10:41:19,752 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-08 06:41:19] 2025-10-08 10:41:19,754 [wrapper] pilotpid: 3094764
[2025-10-08 06:41:19] 2025-10-08 10:41:19,756 [wrapper] Pilot exit status: 0
[2025-10-08 06:41:19] 2025-10-08 10:41:19,768 [wrapper] pandaids: 6832199568
[2025-10-08 06:41:19] 2025-10-08 10:41:19,816 [wrapper] cleanup supervisor_pilot 3761377 3094765
[2025-10-08 06:41:19] 2025-10-08 10:41:19,820 [wrapper] Test setup, not cleaning
[2025-10-08 06:41:19] 2025-10-08 10:41:19,823 [wrapper] apfmon messages muted
[2025-10-08 06:41:19] 2025-10-08 10:41:19,826 [wrapper] ==== wrapper stdout END ====
[2025-10-08 06:41:19] 2025-10-08 10:41:19,828 [wrapper] ==== wrapper stderr END ====
[2025-10-08 06:41:19]  *** Error codes and diagnostics ***
[2025-10-08 06:41:19]     "exeErrorCode": 0,
[2025-10-08 06:41:19]     "exeErrorDiag": "",
[2025-10-08 06:41:19]     "pilotErrorCode": 0,
[2025-10-08 06:41:19]     "pilotErrorDiag": "",
[2025-10-08 06:41:19]  *** Listing of results directory ***
[2025-10-08 06:41:19] total 399044
[2025-10-08 06:41:19] -rw-r--r--. 1 boincer umatlas      5112 Oct  5 20:53 queuedata.json
[2025-10-08 06:41:19] -rw-r--r--. 1 boincer umatlas    552446 Oct  5 20:53 pilot3.tar.gz
[2025-10-08 06:41:19] -rwx------. 1 boincer umatlas     36292 Oct  5 20:53 runpilot2-wrapper.sh
[2025-10-08 06:41:19] -rw-r--r--. 1 boincer umatlas       100 Oct  8 00:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-08 06:41:19] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  8 00:04 run_atlas
[2025-10-08 06:41:19] -rw-r--r--. 1 boincer umatlas       105 Oct  8 00:04 job.xml
[2025-10-08 06:41:19] -rw-r--r--. 2 boincer umatlas 218407496 Oct  8 00:04 EVNT.46376901._003746.pool.root.1
[2025-10-08 06:41:19] -rw-r--r--. 2 boincer umatlas     15120 Oct  8 00:04 start_atlas.sh
[2025-10-08 06:41:19] drwxrwx--x. 2 boincer umatlas      4096 Oct  8 00:04 shared
[2025-10-08 06:41:19] -rw-r--r--. 2 boincer umatlas    565599 Oct  8 00:04 input.tar.gz
[2025-10-08 06:41:19] -rw-r--r--. 1 boincer umatlas         0 Oct  8 00:04 boinc_lockfile
[2025-10-08 06:41:19] -rw-r--r--. 1 boincer umatlas      2516 Oct  8 00:04 pandaJob.out
[2025-10-08 06:41:19] -rw-------. 1 boincer umatlas    979841 Oct  8 00:06 agis_schedconf.cvmfs.json
[2025-10-08 06:41:19] drwx------. 4 boincer umatlas      4096 Oct  8 00:06 pilot3
[2025-10-08 06:41:19] -rw-r--r--. 1 boincer umatlas      6660 Oct  8 06:38 init_data.xml
[2025-10-08 06:41:19] -rw-------. 1 boincer umatlas 179439828 Oct  8 06:39 HITS.46376905._101332.pool.root.1
[2025-10-08 06:41:19] -rw-r--r--. 1 boincer umatlas       531 Oct  8 06:39 boinc_task_state.xml
[2025-10-08 06:41:19] -rw-------. 1 boincer umatlas        95 Oct  8 06:40 pilot_heartbeat.json
[2025-10-08 06:41:19] -rw-------. 1 boincer umatlas      1038 Oct  8 06:40 memory_monitor_summary.json
[2025-10-08 06:41:19] -rw-------. 1 boincer umatlas   1560401 Oct  8 06:40 agis_ddmendpoints.agis.ALL.json
[2025-10-08 06:41:19] -rw-------. 1 boincer umatlas    612156 Oct  8 06:40 log.46376905._101332.job.log.tgz.1
[2025-10-08 06:41:19] -rw-------. 1 boincer umatlas      7818 Oct  8 06:40 heartbeat.json
[2025-10-08 06:41:19] -rw-r--r--. 1 boincer umatlas      8192 Oct  8 06:40 boinc_mmap_file
[2025-10-08 06:41:19] -rw-r--r--. 1 boincer umatlas        28 Oct  8 06:40 wrapper_checkpoint.txt
[2025-10-08 06:41:19] -rw-------. 1 boincer umatlas       823 Oct  8 06:41 pilotlog.txt
[2025-10-08 06:41:19] -rw-------. 1 boincer umatlas   2831137 Oct  8 06:41 log.46376905._101332.job.log.1
[2025-10-08 06:41:19] -rw-------. 1 boincer umatlas       357 Oct  8 06:41 output.list
[2025-10-08 06:41:19] -rw-r--r--. 1 boincer umatlas       620 Oct  8 06:41 runtime_log
[2025-10-08 06:41:19] -rw-------. 1 boincer umatlas   3461120 Oct  8 06:41 result.tar.gz
[2025-10-08 06:41:19] -rw-------. 1 boincer umatlas       657 Oct  8 06:41 7dlLDmAfoP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmx0RNDm5ybqLn.diag
[2025-10-08 06:41:19] -rw-r--r--. 1 boincer umatlas      8701 Oct  8 06:41 runtime_log.err
[2025-10-08 06:41:19] -rw-r--r--. 1 boincer umatlas     21098 Oct  8 06:41 stderr.txt
[2025-10-08 06:41:19] HITS file was successfully produced:
[2025-10-08 06:41:19] -rw-------. 1 boincer umatlas 179439828 Oct  8 06:39 shared/HITS.pool.root.1
[2025-10-08 06:41:19]  *** Contents of shared directory: ***
[2025-10-08 06:41:19] total 392484
[2025-10-08 06:41:19] -rw-r--r--. 2 boincer umatlas 218407496 Oct  8 00:04 ATLAS.root_0
[2025-10-08 06:41:19] -rw-r--r--. 2 boincer umatlas     15120 Oct  8 00:04 start_atlas.sh
[2025-10-08 06:41:19] -rw-r--r--. 2 boincer umatlas    565599 Oct  8 00:04 input.tar.gz
[2025-10-08 06:41:19] -rw-------. 1 boincer umatlas 179439828 Oct  8 06:39 HITS.pool.root.1
[2025-10-08 06:41:19] -rw-------. 1 boincer umatlas   3461120 Oct  8 06:41 result.tar.gz
06:41:21 (3088216): run_atlas exited; CPU time 44445.410999
06:41:21 (3088216): called boinc_finish(0)

</stderr_txt>
]]>

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