Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
06:36:01 (1738291): wrapper (7.7.26015): starting
06:36:01 (1738291): wrapper: running run_atlas (--nthreads 4)
[2025-10-08 06:36:01] Arguments: --nthreads 4
[2025-10-08 06:36:01] Threads: 4
[2025-10-08 06:36:01] Checking for CVMFS
[2025-10-08 06:36:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 06:36:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 06:36:02] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 06:36:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 06:36:02] 2.9.2.0 1712902 70 51740 151458 1 57 28682409 36864001 0 130560 0 65449 99.974 4096 803 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-10-08 06:36:02] CVMFS is ok
[2025-10-08 06:36:02] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-08 06:36:02] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-08 06:36:02] Further information can be found at the LHC@home message board.
[2025-10-08 06:36:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 06:36:02] Checking for apptainer binary...
[2025-10-08 06:36:02] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 06:36:02] Running /usr/bin/apptainer --version
[2025-10-08 06:36:02] apptainer version 1.4.1-1.1
[2025-10-08 06:36:02] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 06:36:02] thA325
[2025-10-08 06:36:02] apptainer works
[2025-10-08 06:36:02] Set ATHENA_PROC_NUMBER=4
[2025-10-08 06:36:02] Set ATHENA_CORE_NUMBER=4
[2025-10-08 06:36:02] Starting ATLAS job with PandaID=6835594559
[2025-10-08 06:36:02] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-08 07:48:22]  *** The last 200 lines of the pilot log: ***
[2025-10-08 07:48:22] 2025-10-08 05:47:41,003 | INFO     | [job] create_data_payload thread has finished
[2025-10-08 07:48:22] 2025-10-08 05:47:41,109 | INFO     | [payload] execute_payloads thread has finished
[2025-10-08 07:48:22] 2025-10-08 05:47:41,110 | INFO     | [payload] validate_pre thread has finished
[2025-10-08 07:48:22] 2025-10-08 05:47:41,112 | INFO     | all job control threads have been joined
[2025-10-08 07:48:22] 2025-10-08 05:47:41,311 | INFO     | all payload control threads have been joined
[2025-10-08 07:48:22] 2025-10-08 05:47:41,332 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-08 07:48:22] 2025-10-08 05:47:41,345 | INFO     | [data] copytool_in thread has finished
[2025-10-08 07:48:22] 2025-10-08 05:47:41,346 | INFO     | [job] job monitor thread has finished
[2025-10-08 07:48:22] 2025-10-08 05:47:41,645 | INFO     | [data] control thread has finished
[2025-10-08 07:48:22] 2025-10-08 05:47:41,648 | INFO     | [payload] validate_post thread has finished
[2025-10-08 07:48:22] 2025-10-08 05:47:41,957 | INFO     | [payload] failed_post thread has finished
[2025-10-08 07:48:22] 2025-10-08 05:47:42,118 | INFO     | [job] control thread has finished
[2025-10-08 07:48:22] 2025-10-08 05:47:42,317 | INFO     | [payload] control thread has finished
[2025-10-08 07:48:22] 2025-10-08 05:47:42,412 | INFO     | [job] validate thread has finished
[2025-10-08 07:48:22] 2025-10-08 05:47:42,921 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-08 07:48:22] 2025-10-08 05:47:43,338 | INFO     | [data] copytool_out thread has finished
[2025-10-08 07:48:22] 2025-10-08 05:47:43,926 | INFO     | [job] queue monitor thread has finished
[2025-10-08 07:48:22] 2025-10-08 05:47:44,150 | INFO     | [data] queue_monitor thread has finished
[2025-10-08 07:48:22] 2025-10-08 05:47:50,877 | INFO     | job.realtimelogging is not enabled
[2025-10-08 07:48:22] 2025-10-08 05:47:51,883 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-08 07:48:22] 2025-10-08 05:48:10,313 | INFO     | PID=1742072 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-08 07:48:22] 2025-10-08 05:48:10,313 | INFO     | found 0 job(s) in 20 queues
[2025-10-08 07:48:22] 2025-10-08 05:48:10,313 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-08 07:48:22] 2025-10-08 05:48:10,313 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-08 07:48:22] 2025-10-08 05:48:14,921 | INFO     | [monitor] cgroup control has ended
[2025-10-08 07:48:22] 2025-10-08 05:48:16,820 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139711866681152)>', '<ExcThread(monitor, started 139710722733824)>']
[2025-10-08 07:48:22] 2025-10-08 05:48:17,347 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-08 07:48:22] 2025-10-08 05:48:17,348 | INFO     | [monitor] control thread has ended
[2025-10-08 07:48:22] 2025-10-08 05:48:21,845 | INFO     | all workflow threads have been joined
[2025-10-08 07:48:22] 2025-10-08 05:48:21,846 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-08 07:48:22] 2025-10-08 05:48:21,846 | INFO     | traces error code: 0
[2025-10-08 07:48:22] 2025-10-08 05:48:21,846 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-08 07:48:22] 2025-10-08 05:48:21,915 [wrapper] ==== pilot stdout END ====
[2025-10-08 07:48:22] 2025-10-08 05:48:21,919 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-08 07:48:22] 2025-10-08 05:48:21,922 [wrapper] pilotpid: 1742072
[2025-10-08 07:48:22] 2025-10-08 05:48:21,926 [wrapper] Pilot exit status: 0
[2025-10-08 07:48:22] 2025-10-08 05:48:21,937 [wrapper] pandaids: 6835594559
[2025-10-08 07:48:22] 2025-10-08 05:48:21,958 [wrapper] cleanup supervisor_pilot 1758602 1742073
[2025-10-08 07:48:22] 2025-10-08 05:48:21,962 [wrapper] Test setup, not cleaning
[2025-10-08 07:48:22] 2025-10-08 05:48:21,965 [wrapper] apfmon messages muted
[2025-10-08 07:48:22] 2025-10-08 05:48:21,969 [wrapper] ==== wrapper stdout END ====
[2025-10-08 07:48:22] 2025-10-08 05:48:21,973 [wrapper] ==== wrapper stderr END ====
[2025-10-08 07:48:22]  *** Error codes and diagnostics ***
[2025-10-08 07:48:22]     "exeErrorCode": 0,
[2025-10-08 07:48:22]     "exeErrorDiag": "",
[2025-10-08 07:48:22]     "pilotErrorCode": 0,
[2025-10-08 07:48:22]     "pilotErrorDiag": "",
[2025-10-08 07:48:22]  *** Listing of results directory ***
[2025-10-08 07:48:22] total 414540
[2025-10-08 07:48:22] -rw-r--r-- 1 boinc boinc    552446 Oct  8 04:54 pilot3.tar.gz
[2025-10-08 07:48:22] -rw-r--r-- 1 boinc boinc      5112 Oct  8 05:23 queuedata.json
[2025-10-08 07:48:22] -rwx------ 1 boinc boinc     36292 Oct  8 05:24 runpilot2-wrapper.sh
[2025-10-08 07:48:22] -rw-r--r-- 1 boinc boinc       100 Oct  8 06:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-08 07:48:22] -rwxr-xr-x 1 boinc boinc      7986 Oct  8 06:36 run_atlas
[2025-10-08 07:48:22] -rw-r--r-- 1 boinc boinc       105 Oct  8 06:36 job.xml
[2025-10-08 07:48:22] -rw-r--r-- 2 boinc boinc 221169894 Oct  8 06:36 EVNT.46676267._000019.pool.root.1
[2025-10-08 07:48:22] -rw-r--r-- 2 boinc boinc    565603 Oct  8 06:36 input.tar.gz
[2025-10-08 07:48:22] -rw-r--r-- 2 boinc boinc     15120 Oct  8 06:36 start_atlas.sh
[2025-10-08 07:48:22] drwxrwx--x 2 boinc boinc      4096 Oct  8 06:36 shared
[2025-10-08 07:48:22] -rw-r--r-- 1 boinc boinc         0 Oct  8 06:36 boinc_setup_complete
[2025-10-08 07:48:22] -rw-r--r-- 1 boinc boinc      6370 Oct  8 06:36 init_data.xml
[2025-10-08 07:48:22] -rw-r--r-- 1 boinc boinc         0 Oct  8 06:36 boinc_lockfile
[2025-10-08 07:48:22] -rw-r--r-- 1 boinc boinc      2542 Oct  8 06:36 pandaJob.out
[2025-10-08 07:48:22] -rw------- 1 boinc boinc    979841 Oct  8 06:36 agis_schedconf.cvmfs.json
[2025-10-08 07:48:22] -rw------- 1 boinc boinc   1560401 Oct  8 06:36 agis_ddmendpoints.agis.ALL.json
[2025-10-08 07:48:22] drwx------ 4 boinc boinc      4096 Oct  8 06:36 pilot3
[2025-10-08 07:48:22] -rw------- 1 boinc boinc 197683289 Oct  8 07:47 HITS.46676269._000451.pool.root.1
[2025-10-08 07:48:22] -rw-r--r-- 1 boinc boinc       529 Oct  8 07:47 boinc_task_state.xml
[2025-10-08 07:48:22] -rw------- 1 boinc boinc      1019 Oct  8 07:47 memory_monitor_summary.json
[2025-10-08 07:48:22] -rw------- 1 boinc boinc        95 Oct  8 07:47 pilot_heartbeat.json
[2025-10-08 07:48:22] -rw------- 1 boinc boinc    244315 Oct  8 07:47 log.46676269._000451.job.log.tgz.1
[2025-10-08 07:48:22] -rw------- 1 boinc boinc      7756 Oct  8 07:47 heartbeat.json
[2025-10-08 07:48:22] -rw-r--r-- 1 boinc boinc      8192 Oct  8 07:48 boinc_mmap_file
[2025-10-08 07:48:22] -rw-r--r-- 1 boinc boinc        27 Oct  8 07:48 wrapper_checkpoint.txt
[2025-10-08 07:48:22] -rw------- 1 boinc boinc      5010 Oct  8 07:48 pilotlog.txt
[2025-10-08 07:48:22] -rw------- 1 boinc boinc    634664 Oct  8 07:48 log.46676269._000451.job.log.1
[2025-10-08 07:48:22] -rw------- 1 boinc boinc       357 Oct  8 07:48 output.list
[2025-10-08 07:48:22] -rw-r--r-- 1 boinc boinc       620 Oct  8 07:48 runtime_log
[2025-10-08 07:48:22] -rw------- 1 boinc boinc    901120 Oct  8 07:48 result.tar.gz
[2025-10-08 07:48:22] -rw-r--r-- 1 boinc boinc      8777 Oct  8 07:48 runtime_log.err
[2025-10-08 07:48:22] -rw------- 1 boinc boinc       658 Oct  8 07:48 S8KMDmnxZQ8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmqHXNDmgOAeDn.diag
[2025-10-08 07:48:22] -rw-r--r-- 1 boinc boinc      6754 Oct  8 07:48 stderr.txt
[2025-10-08 07:48:22] HITS file was successfully produced:
[2025-10-08 07:48:22] -rw------- 1 boinc boinc 197683289 Oct  8 07:47 shared/HITS.pool.root.1
[2025-10-08 07:48:22]  *** Contents of shared directory: ***
[2025-10-08 07:48:22] total 410500
[2025-10-08 07:48:22] -rw-r--r-- 2 boinc boinc 221169894 Oct  8 06:36 ATLAS.root_0
[2025-10-08 07:48:22] -rw-r--r-- 2 boinc boinc    565603 Oct  8 06:36 input.tar.gz
[2025-10-08 07:48:22] -rw-r--r-- 2 boinc boinc     15120 Oct  8 06:36 start_atlas.sh
[2025-10-08 07:48:22] -rw------- 1 boinc boinc 197683289 Oct  8 07:47 HITS.pool.root.1
[2025-10-08 07:48:22] -rw------- 1 boinc boinc    901120 Oct  8 07:48 result.tar.gz
07:48:23 (1738291): run_atlas exited; CPU time 16030.484541
07:48:23 (1738291): called boinc_finish(0)

</stderr_txt>
]]>

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