Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:34:35 (11211): wrapper (7.7.26015): starting
07:34:35 (11211): wrapper: running run_atlas (--nthreads 8)
[2025-10-08 07:34:35] Arguments: --nthreads 8
[2025-10-08 07:34:35] Threads: 8
[2025-10-08 07:34:35] Checking for CVMFS
[2025-10-08 07:34:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-08 07:34:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-08 07:34:37] Running cvmfs_config stat atlas.cern.ch
[2025-10-08 07:34:38] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-08 07:34:38] 2.11.2.0 1311 214257 138064 151459 0 60 15822398 25165824 4632 130560 0 118784353 99.872 67294751 3150 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-10-08 07:34:38] CVMFS is ok
[2025-10-08 07:34:38] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-08 07:34:38] Checking for apptainer binary...
[2025-10-08 07:34:38] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-08 07:34:38] Running /usr/bin/apptainer --version
[2025-10-08 07:34:38] apptainer version 1.3.2-1.el7
[2025-10-08 07:34:38] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-08 07:35:15] cg-vwn270.simple-grid.lan
[2025-10-08 07:35:15] apptainer works
[2025-10-08 07:35:15] Set ATHENA_PROC_NUMBER=8
[2025-10-08 07:35:15] Set ATHENA_CORE_NUMBER=8
[2025-10-08 07:35:15] Starting ATLAS job with PandaID=6830225716
[2025-10-08 07:35:15] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/14 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-08 11:38:21]  *** The last 200 lines of the pilot log: ***
[2025-10-08 11:38:21] 2025-10-08 09:37:29,178 | INFO     | sum of square deviations: 3627000098.0
[2025-10-08 11:38:21] 2025-10-08 09:37:29,180 | INFO     | sum of deviations: 112277525309.0
[2025-10-08 11:38:21] 2025-10-08 09:37:29,180 | INFO     | mean x: 1759909219.0
[2025-10-08 11:38:21] 2025-10-08 09:37:29,180 | INFO     | mean y: 2406406.0572687224
[2025-10-08 11:38:21] 2025-10-08 09:37:29,180 | INFO     | -- intersect: -54477396885.58712
[2025-10-08 11:38:21] 2025-10-08 09:37:29,180 | INFO     | intersect: -54477396885.58712
[2025-10-08 11:38:21] 2025-10-08 09:37:29,181 | INFO     | chi2: 7.8564664157776
[2025-10-08 11:38:21] 2025-10-08 09:37:29,181 | INFO     | sum of square deviations: 3392567795.5
[2025-10-08 11:38:21] 2025-10-08 09:37:29,190 | INFO     | sum of deviations: 124901222128.5
[2025-10-08 11:38:21] 2025-10-08 09:37:29,190 | INFO     | mean x: 1759909066.5
[2025-10-08 11:38:21] 2025-10-08 09:37:29,190 | INFO     | mean y: 2414438.085585586
[2025-10-08 11:38:21] 2025-10-08 09:37:29,190 | INFO     | -- intersect: -64790629206.45006
[2025-10-08 11:38:21] 2025-10-08 09:37:29,190 | INFO     | intersect: -64790629206.45006
[2025-10-08 11:38:21] 2025-10-08 09:37:29,191 | INFO     | chi2: 7.110705607152245
[2025-10-08 11:38:21] 2025-10-08 09:37:29,191 | INFO     | current chi2=7.110705607152245 (change=9.492318418464754 %)
[2025-10-08 11:38:21] 2025-10-08 09:37:29,191 | INFO     | right removable region: 221
[2025-10-08 11:38:21] 2025-10-08 09:37:29,192 | INFO     | sum of square deviations: 3392567795.5
[2025-10-08 11:38:21] 2025-10-08 09:37:29,193 | INFO     | sum of deviations: 34199926269.000015
[2025-10-08 11:38:21] 2025-10-08 09:37:29,194 | INFO     | mean x: 1759909371.5
[2025-10-08 11:38:21] 2025-10-08 09:37:29,194 | INFO     | mean y: 2457162.5405405406
[2025-10-08 11:38:21] 2025-10-08 09:37:29,194 | INFO     | -- intersect: -17738904063.978878
[2025-10-08 11:38:21] 2025-10-08 09:37:29,194 | INFO     | intersect: -17738904063.978878
[2025-10-08 11:38:21] 2025-10-08 09:37:29,194 | INFO     | chi2: 2.8891265105412702
[2025-10-08 11:38:21] 2025-10-08 09:37:29,195 | INFO     | current chi2=2.8891265105412702 (change=63.226133001227666 %)
[2025-10-08 11:38:21] 2025-10-08 09:37:29,195 | INFO     | sum of square deviations: 3168461268.0
[2025-10-08 11:38:21] 2025-10-08 09:37:29,197 | INFO     | sum of deviations: -13773053909.0
[2025-10-08 11:38:21] 2025-10-08 09:37:29,197 | INFO     | mean x: 1759909524.0
[2025-10-08 11:38:21] 2025-10-08 09:37:29,197 | INFO     | mean y: 2489661.8387096776
[2025-10-08 11:38:21] 2025-10-08 09:37:29,197 | INFO     | -- intersect: 7652679043.612313
[2025-10-08 11:38:21] 2025-10-08 09:37:29,197 | INFO     | intersect: 7652679043.612313
[2025-10-08 11:38:21] 2025-10-08 09:37:29,198 | INFO     | chi2: 0.9441482844245637
[2025-10-08 11:38:21] 2025-10-08 09:37:29,198 | INFO     | current chi2=0.9441482844245637 (change=67.32063199795013 %)
[2025-10-08 11:38:21] 2025-10-08 09:37:29,198 | INFO     | sum of square deviations: 2954447953.0
[2025-10-08 11:38:21] 2025-10-08 09:37:29,200 | INFO     | sum of deviations: -15615516453.0
[2025-10-08 11:38:21] 2025-10-08 09:37:29,200 | INFO     | mean x: 1759909676.5
[2025-10-08 11:38:21] 2025-10-08 09:37:29,200 | INFO     | mean y: 2490914.2641509436
[2025-10-08 11:38:21] 2025-10-08 09:37:29,201 | INFO     | -- intersect: 9304363530.186878
[2025-10-08 11:38:21] 2025-10-08 09:37:29,201 | INFO     | intersect: 9304363530.186878
[2025-10-08 11:38:21] 2025-10-08 09:37:29,201 | INFO     | chi2: 0.9094793758175013
[2025-10-08 11:38:21] 2025-10-08 09:37:29,201 | INFO     | current chi2=0.9094793758175013 (change=3.671977080188446 %)
[2025-10-08 11:38:21] 2025-10-08 09:37:29,201 | INFO     | left removable region: 30
[2025-10-08 11:38:21] 2025-10-08 09:37:29,202 | INFO     | sum of square deviations: 2160561440.0
[2025-10-08 11:38:21] 2025-10-08 09:37:29,203 | INFO     | sum of deviations: 6880516533.0
[2025-10-08 11:38:21] 2025-10-08 09:37:29,203 | INFO     | mean x: 1759909951.0
[2025-10-08 11:38:21] 2025-10-08 09:37:29,204 | INFO     | mean y: 2495277.057591623
[2025-10-08 11:38:21] 2025-10-08 09:37:29,204 | INFO     | -- intersect: -5602107901.663732
[2025-10-08 11:38:21] 2025-10-08 09:37:29,204 | INFO     | intersect: -5602107901.663732
[2025-10-08 11:38:21] 2025-10-08 09:37:29,204 | INFO     | chi2: 0.0008495925055429569
[2025-10-08 11:38:21] 2025-10-08 09:37:29,204 | INFO     | -- intersect: -5602107901.663732
[2025-10-08 11:38:21] 2025-10-08 09:37:29,205 | INFO     | current memory leak: 3.18 B/s (using 191 data points, chi2=0.00)
[2025-10-08 11:38:21] 2025-10-08 09:37:29,205 | INFO     | could have reported an average CPU frequency of 1999 MHz (11 samples)
[2025-10-08 11:38:21] 2025-10-08 09:37:29,206 | INFO     | ..............................
[2025-10-08 11:38:21] 2025-10-08 09:37:29,206 | INFO     | . Timing measurements:
[2025-10-08 11:38:21] 2025-10-08 09:37:29,206 | INFO     | . get job = 0 s
[2025-10-08 11:38:21] 2025-10-08 09:37:29,206 | INFO     | . initial setup = 10 s
[2025-10-08 11:38:21] 2025-10-08 09:37:29,206 | INFO     | . payload setup = 113 s
[2025-10-08 11:38:21] 2025-10-08 09:37:29,206 | INFO     | . stage-in = 0 s
[2025-10-08 11:38:21] 2025-10-08 09:37:29,206 | INFO     | . payload execution = 13974 s
[2025-10-08 11:38:21] 2025-10-08 09:37:29,206 | INFO     | . stage-out = 3 s
[2025-10-08 11:38:21] 2025-10-08 09:37:29,206 | INFO     | . log creation = 1 s
[2025-10-08 11:38:21] 2025-10-08 09:37:29,207 | INFO     | ..............................
[2025-10-08 11:38:21] 2025-10-08 09:37:29,409 | INFO     | 
[2025-10-08 11:38:21] 2025-10-08 09:37:29,410 | INFO     | job summary report
[2025-10-08 11:38:21] 2025-10-08 09:37:29,410 | INFO     | --------------------------------------------------
[2025-10-08 11:38:21] 2025-10-08 09:37:29,410 | INFO     | PanDA job id: 6830225716
[2025-10-08 11:38:21] 2025-10-08 09:37:29,410 | INFO     | task id: 46376905
[2025-10-08 11:38:21] 2025-10-08 09:37:29,410 | INFO     | errors: (none)
[2025-10-08 11:38:21] 2025-10-08 09:37:29,410 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-08 11:38:21] 2025-10-08 09:37:29,410 | INFO     | pilot state: finished 
[2025-10-08 11:38:21] 2025-10-08 09:37:29,410 | INFO     | transexitcode: 0
[2025-10-08 11:38:21] 2025-10-08 09:37:29,410 | INFO     | exeerrorcode: 0
[2025-10-08 11:38:21] 2025-10-08 09:37:29,410 | INFO     | exeerrordiag: 
[2025-10-08 11:38:21] 2025-10-08 09:37:29,411 | INFO     | exitcode: 0
[2025-10-08 11:38:21] 2025-10-08 09:37:29,411 | INFO     | exitmsg: OK
[2025-10-08 11:38:21] 2025-10-08 09:37:29,411 | INFO     | cpuconsumptiontime: 49030 s
[2025-10-08 11:38:21] 2025-10-08 09:37:29,411 | INFO     | nevents: 400
[2025-10-08 11:38:21] 2025-10-08 09:37:29,411 | INFO     | neventsw: 0
[2025-10-08 11:38:21] 2025-10-08 09:37:29,411 | INFO     | pid: 21517
[2025-10-08 11:38:21] 2025-10-08 09:37:29,411 | INFO     | pgrp: 21517
[2025-10-08 11:38:21] 2025-10-08 09:37:29,411 | INFO     | corecount: 8
[2025-10-08 11:38:21] 2025-10-08 09:37:29,411 | INFO     | event service: False
[2025-10-08 11:38:21] 2025-10-08 09:37:29,411 | INFO     | sizes: {0: 2347937, 1: 2348623, 2: 2348822, 13: 2348822, 24: 2348878, 35: 2348906, 45: 2349062, 56: 2349090, 67: 2349118, 75: 2349408, 78: 2349436, 14091: 2379768,
[2025-10-08 11:38:21] 2025-10-08 09:37:29,411 | INFO     | --------------------------------------------------
[2025-10-08 11:38:21] 2025-10-08 09:37:29,411 | INFO     | 
[2025-10-08 11:38:21] 2025-10-08 09:37:29,412 | INFO     | executing command: ls -lF /var/lib/boinc/slots/14
[2025-10-08 11:38:21] 2025-10-08 09:37:29,779 | INFO     | time since job start (14322s) is within the limit (172800.0s)
[2025-10-08 11:38:21] 2025-10-08 09:37:29,835 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-08 11:38:21] 2025-10-08 09:37:29,836 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-08 11:38:21] 2025-10-08 09:37:29,836 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-08 11:38:21] 2025-10-08 09:37:29,836 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-08 11:38:21] 2025-10-08 09:37:29,836 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-08 11:38:21] 2025-10-08 09:37:29,836 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-08 11:38:21] 2025-10-08 09:37:29,836 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-08 11:38:21] 2025-10-08 09:37:29,836 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-08 11:38:21] 2025-10-08 09:37:29,836 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-08 11:38:21] 2025-10-08 09:37:29,837 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-08 11:38:21] 2025-10-08 09:37:29,837 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-08 11:38:21] 2025-10-08 09:37:29,837 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-08 11:38:21] 2025-10-08 09:37:29,837 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-08 11:38:21] 2025-10-08 09:37:29,837 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-08 11:38:21] 2025-10-08 09:37:29,837 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-08 11:38:21] 2025-10-08 09:37:29,837 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-08 11:38:21] 2025-10-08 09:37:29,837 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-08 11:38:21] 2025-10-08 09:37:29,837 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-08 11:38:21] 2025-10-08 09:37:29,837 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-08 11:38:21] 2025-10-08 09:37:29,838 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-08 11:38:21] 2025-10-08 09:37:29,838 | INFO     | job 6830225716 has completed (purged errors)
[2025-10-08 11:38:21] 2025-10-08 09:37:29,838 | INFO     | overall cleanup function is called
[2025-10-08 11:38:21] 2025-10-08 09:37:30,846 | INFO     | --- collectZombieJob: --- 10, [21517]
[2025-10-08 11:38:21] 2025-10-08 09:37:30,846 | INFO     | zombie collector waiting for pid 21517
[2025-10-08 11:38:21] 2025-10-08 09:37:30,846 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-08 11:38:21] 2025-10-08 09:37:30,846 | INFO     | collected zombie processes
[2025-10-08 11:38:21] 2025-10-08 09:37:30,847 | INFO     | will attempt to kill all subprocesses of pid=21517
[2025-10-08 11:38:21] 2025-10-08 09:37:30,979 | INFO     | process IDs to be killed: [21517] (in reverse order)
[2025-10-08 11:38:21] 2025-10-08 09:37:31,539 | WARNING  | found no corresponding commands to process id(s)
[2025-10-08 11:38:21] 2025-10-08 09:37:31,539 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-08 11:38:21] 2025-10-08 09:37:31,542 | INFO     | did not find any defunct processes belonging to 21517
[2025-10-08 11:38:21] 2025-10-08 09:37:31,545 | INFO     | did not find any defunct processes belonging to 21517
[2025-10-08 11:38:21] 2025-10-08 09:37:31,546 | INFO     | ready for new job
[2025-10-08 11:38:21] 2025-10-08 09:37:31,546 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-08 11:38:21] 2025-10-08 09:37:31,548 | INFO     | ***************************************
[2025-10-08 11:38:21] 2025-10-08 09:37:31,548 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-08 11:38:21] 2025-10-08 09:37:31,548 | INFO     | ***************************************
[2025-10-08 11:38:21] 2025-10-08 09:37:31,549 | INFO     | 
[2025-10-08 11:38:21] 2025-10-08 09:37:31,549 | INFO     | pilot is running in a VM
[2025-10-08 11:38:21] 2025-10-08 09:37:31,549 | INFO     | architecture information:
[2025-10-08 11:38:21] 2025-10-08 09:37:31,550 | INFO     | executing command: cat /etc/os-release
[2025-10-08 11:38:21] 2025-10-08 09:37:31,613 | INFO     | cat /etc/os-release:
[2025-10-08 11:38:21] NAME="CentOS Linux"
[2025-10-08 11:38:21] VERSION="7 (Core)"
[2025-10-08 11:38:21] ID="centos"
[2025-10-08 11:38:21] ID_LIKE="rhel fedora"
[2025-10-08 11:38:21] VERSION_ID="7"
[2025-10-08 11:38:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-08 11:38:21] ANSI_COLOR="0;31"
[2025-10-08 11:38:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-08 11:38:21] HOME_URL="https://www.centos.org/"
[2025-10-08 11:38:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-08 11:38:21] 
[2025-10-08 11:38:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-08 11:38:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-08 11:38:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-08 11:38:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-08 11:38:21] 
[2025-10-08 11:38:21] 2025-10-08 09:37:31,613 | INFO     | ***************************************
[2025-10-08 11:38:21] 2025-10-08 09:37:32,116 | INFO     | executing command: df -mP /var/lib/boinc/slots/14
[2025-10-08 11:38:21] 2025-10-08 09:37:32,223 | INFO     | sufficient remaining disk space (496727228416 B)
[2025-10-08 11:38:21] 2025-10-08 09:37:32,224 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-08 11:38:21] 2025-10-08 09:37:32,224 | INFO     | current server update state: UPDATING_FINAL
[2025-10-08 11:38:21] 2025-10-08 09:37:32,224 | INFO     | update_server=False
[2025-10-08 11:38:21] 2025-10-08 09:37:32,224 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-08 11:38:21] 2025-10-08 09:37:32,224 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-08 11:38:21] 2025-10-08 09:37:32,638 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-08 11:38:21] 2025-10-08 09:37:32,638 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-08 11:38:21] 2025-10-08 09:37:32,638 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-08 11:38:21] 2025-10-08 09:37:32,639 | INFO     | will abort loop
[2025-10-08 11:38:21] 2025-10-08 09:37:33,230 | INFO     | [job] retrieve thread has finished
[2025-10-08 11:38:21] 2025-10-08 09:37:33,276 | INFO     | all data control threads have been joined
[2025-10-08 11:38:21] 2025-10-08 09:37:33,329 | INFO     | [payload] execute_payloads thread has finished
[2025-10-08 11:38:21] 2025-10-08 09:37:33,409 | INFO     | all job control threads have been joined
[2025-10-08 11:38:21] 2025-10-08 09:37:33,634 | INFO     | all payload control threads have been joined
[2025-10-08 11:38:21] 2025-10-08 09:37:33,644 | INFO     | [job] job monitor thread has finished
[2025-10-08 11:38:21] 2025-10-08 09:37:33,649 | INFO     | [job] create_data_payload thread has finished
[2025-10-08 11:38:21] 2025-10-08 09:37:33,651 | INFO     | [payload] validate_pre thread has finished
[2025-10-08 11:38:21] 2025-10-08 09:37:33,964 | INFO     | [payload] failed_post thread has finished
[2025-10-08 11:38:21] 2025-10-08 09:37:34,145 | INFO     | [data] copytool_in thread has finished
[2025-10-08 11:38:21] 2025-10-08 09:37:34,230 | INFO     | [data] copytool_out thread has finished
[2025-10-08 11:38:21] 2025-10-08 09:37:34,271 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-08 11:38:21] 2025-10-08 09:37:34,282 | INFO     | [data] control thread has finished
[2025-10-08 11:38:21] 2025-10-08 09:37:34,287 | INFO     | [job] validate thread has finished
[2025-10-08 11:38:21] 2025-10-08 09:37:34,414 | INFO     | [job] control thread has finished
[2025-10-08 11:38:21] 2025-10-08 09:37:34,421 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-08 11:38:21] 2025-10-08 09:37:34,640 | INFO     | [payload] control thread has finished
[2025-10-08 11:38:21] 2025-10-08 09:37:34,718 | INFO     | [payload] validate_post thread has finished
[2025-10-08 11:38:21] 2025-10-08 09:37:35,427 | INFO     | [job] queue monitor thread has finished
[2025-10-08 11:38:21] 2025-10-08 09:37:35,719 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-08 11:38:21] 2025-10-08 09:37:39,731 | INFO     | [data] queue_monitor thread has finished
[2025-10-08 11:38:21] 2025-10-08 09:38:02,962 | INFO     | PID=15002 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-08 11:38:21] 2025-10-08 09:38:02,963 | INFO     | .. there are 9 such processes running
[2025-10-08 11:38:21] 2025-10-08 09:38:02,963 | INFO     | found 0 job(s) in 20 queues
[2025-10-08 11:38:21] 2025-10-08 09:38:02,963 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-08 11:38:21] 2025-10-08 09:38:02,963 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-08 11:38:21] 2025-10-08 09:38:11,965 | INFO     | [monitor] cgroup control has ended
[2025-10-08 11:38:21] 2025-10-08 09:38:13,715 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140180149507904)>', '<ExcThread(monitor, started 140179847231232)>']
[2025-10-08 11:38:21] 2025-10-08 09:38:14,031 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-08 11:38:21] 2025-10-08 09:38:14,031 | INFO     | [monitor] control thread has ended
[2025-10-08 11:38:21] 2025-10-08 09:38:18,741 | INFO     | all workflow threads have been joined
[2025-10-08 11:38:21] 2025-10-08 09:38:18,741 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-08 11:38:21] 2025-10-08 09:38:18,742 | INFO     | traces error code: 0
[2025-10-08 11:38:21] 2025-10-08 09:38:18,742 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-08 11:38:21] 2025-10-08 09:38:19,248 [wrapper] ==== pilot stdout END ====
[2025-10-08 11:38:21] 2025-10-08 09:38:19,303 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-08 11:38:21] 2025-10-08 09:38:19,336 [wrapper] pilotpid: 15002
[2025-10-08 11:38:21] 2025-10-08 09:38:19,375 [wrapper] Pilot exit status: 0
[2025-10-08 11:38:21] 2025-10-08 09:38:19,550 [wrapper] pandaids: 6830225716
[2025-10-08 11:38:21] 2025-10-08 09:38:19,935 [wrapper] cleanup supervisor_pilot 13038 15003
[2025-10-08 11:38:21] 2025-10-08 09:38:19,966 [wrapper] Test setup, not cleaning
[2025-10-08 11:38:21] 2025-10-08 09:38:20,001 [wrapper] apfmon messages muted
[2025-10-08 11:38:21] 2025-10-08 09:38:20,028 [wrapper] ==== wrapper stdout END ====
[2025-10-08 11:38:21] 2025-10-08 09:38:20,070 [wrapper] ==== wrapper stderr END ====
[2025-10-08 11:38:21]  *** Error codes and diagnostics ***
[2025-10-08 11:38:21]     "exeErrorCode": 0,
[2025-10-08 11:38:21]     "exeErrorDiag": "",
[2025-10-08 11:38:21]     "pilotErrorCode": 0,
[2025-10-08 11:38:21]     "pilotErrorDiag": "",
[2025-10-08 11:38:21]  *** Listing of results directory ***
[2025-10-08 11:38:21] total 391924
[2025-10-08 11:38:21] -rw-r--r--. 1 boinc boinc      5112 Oct  4 21:56 queuedata.json
[2025-10-08 11:38:21] -rw-r--r--. 1 boinc boinc    552446 Oct  4 21:56 pilot3.tar.gz
[2025-10-08 11:38:21] -rwx------. 1 boinc boinc     36292 Oct  4 21:57 runpilot2-wrapper.sh
[2025-10-08 11:38:21] -rw-r--r--. 1 boinc boinc       100 Oct  8 07:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-08 11:38:21] -rwxr-xr-x. 1 boinc boinc      7986 Oct  8 07:34 run_atlas
[2025-10-08 11:38:21] -rw-r--r--. 1 boinc boinc       105 Oct  8 07:34 job.xml
[2025-10-08 11:38:21] -rw-r--r--. 2 boinc boinc 213721412 Oct  8 07:34 EVNT.46376901._002412.pool.root.1
[2025-10-08 11:38:21] -rw-r--r--. 2 boinc boinc     15120 Oct  8 07:34 start_atlas.sh
[2025-10-08 11:38:21] drwxrwx--x. 2 boinc boinc        68 Oct  8 07:34 shared
[2025-10-08 11:38:21] -rw-r--r--. 2 boinc boinc    565604 Oct  8 07:34 input.tar.gz
[2025-10-08 11:38:21] -rw-r--r--. 1 boinc boinc      6392 Oct  8 07:34 init_data.xml
[2025-10-08 11:38:21] -rw-r--r--. 1 boinc boinc         0 Oct  8 07:34 boinc_lockfile
[2025-10-08 11:38:21] -rw-r--r--. 1 boinc boinc      2518 Oct  8 07:35 pandaJob.out
[2025-10-08 11:38:21] -rw-------. 1 boinc boinc    979841 Oct  8 07:38 agis_schedconf.cvmfs.json
[2025-10-08 11:38:21] drwx------. 4 boinc boinc      4096 Oct  8 07:38 pilot3
[2025-10-08 11:38:21] -rw-------. 1 boinc boinc 178979356 Oct  8 11:34 HITS.46376905._066617.pool.root.1
[2025-10-08 11:38:21] -rw-r--r--. 1 boinc boinc       531 Oct  8 11:35 boinc_task_state.xml
[2025-10-08 11:38:21] -rw-------. 1 boinc boinc      1013 Oct  8 11:36 memory_monitor_summary.json
[2025-10-08 11:38:21] -rw-------. 1 boinc boinc   1560401 Oct  8 11:36 agis_ddmendpoints.agis.ALL.json
[2025-10-08 11:38:21] -rw-------. 1 boinc boinc    458434 Oct  8 11:36 log.46376905._066617.job.log.tgz.1
[2025-10-08 11:38:21] -rw-------. 1 boinc boinc        95 Oct  8 11:37 pilot_heartbeat.json
[2025-10-08 11:38:21] -rw-------. 1 boinc boinc      7775 Oct  8 11:37 heartbeat.json
[2025-10-08 11:38:21] -rw-r--r--. 1 boinc boinc        28 Oct  8 11:37 wrapper_checkpoint.txt
[2025-10-08 11:38:21] -rw-r--r--. 1 boinc boinc      8192 Oct  8 11:37 boinc_mmap_file
[2025-10-08 11:38:21] -rw-------. 1 boinc boinc      5071 Oct  8 11:38 pilotlog.txt
[2025-10-08 11:38:21] -rw-------. 1 boinc boinc   1914269 Oct  8 11:38 log.46376905._066617.job.log.1
[2025-10-08 11:38:21] -rw-------. 1 boinc boinc       357 Oct  8 11:38 output.list
[2025-10-08 11:38:21] -rw-r--r--. 1 boinc boinc       620 Oct  8 11:38 runtime_log
[2025-10-08 11:38:21] -rw-------. 1 boinc boinc   2396160 Oct  8 11:38 result.tar.gz
[2025-10-08 11:38:21] -rw-r--r--. 1 boinc boinc      8717 Oct  8 11:38 runtime_log.err
[2025-10-08 11:38:21] -rw-------. 1 boinc boinc       656 Oct  8 11:38 n3HMDmFZNP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmQUMNDmzngMrn.diag
[2025-10-08 11:38:21] -rw-r--r--. 1 boinc boinc     20667 Oct  8 11:38 stderr.txt
[2025-10-08 11:38:21] HITS file was successfully produced:
[2025-10-08 11:38:21] -rw-------. 1 boinc boinc 178979356 Oct  8 11:34 shared/HITS.pool.root.1
[2025-10-08 11:38:21]  *** Contents of shared directory: ***
[2025-10-08 11:38:21] total 386416
[2025-10-08 11:38:21] -rw-r--r--. 2 boinc boinc 213721412 Oct  8 07:34 ATLAS.root_0
[2025-10-08 11:38:21] -rw-r--r--. 2 boinc boinc     15120 Oct  8 07:34 start_atlas.sh
[2025-10-08 11:38:21] -rw-r--r--. 2 boinc boinc    565604 Oct  8 07:34 input.tar.gz
[2025-10-08 11:38:21] -rw-------. 1 boinc boinc 178979356 Oct  8 11:34 HITS.pool.root.1
[2025-10-08 11:38:21] -rw-------. 1 boinc boinc   2396160 Oct  8 11:38 result.tar.gz
11:38:23 (11211): run_atlas exited; CPU time 49227.907755
11:38:23 (11211): called boinc_finish(0)

</stderr_txt>
]]>

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