Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:59:26 (1949416): wrapper (7.7.26015): starting
22:59:26 (1949416): wrapper: running run_atlas (--nthreads 11)
[2025-10-07 22:59:26] Arguments: --nthreads 11
[2025-10-07 22:59:26] Threads: 11
[2025-10-07 22:59:26] Checking for CVMFS
[2025-10-07 22:59:26] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 22:59:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 22:59:26] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 22:59:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 22:59:27] 2.13.1.0 7481 71010 145380 151455 0 309 27760660 40960000 23595 16776704 0 413787154 99.771 243326553 45531 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-07 22:59:27] CVMFS is ok
[2025-10-07 22:59:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-07 22:59:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-07 22:59:27] Further information can be found at the LHC@home message board.
[2025-10-07 22:59:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 22:59:27] Checking for apptainer binary...
[2025-10-07 22:59:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-07 22:59:27] Running /usr/bin/apptainer --version
[2025-10-07 22:59:28] apptainer version 1.4.2-1.el9
[2025-10-07 22:59:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 22:59:29] c-208-38.aglt2.org
[2025-10-07 22:59:29] apptainer works
[2025-10-07 22:59:29] Set ATHENA_PROC_NUMBER=11
[2025-10-07 22:59:29] Set ATHENA_CORE_NUMBER=11
[2025-10-07 22:59:29] Starting ATLAS job with PandaID=6830522109
[2025-10-07 22:59:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-08 00:27:32]  *** The last 200 lines of the pilot log: ***
[2025-10-08 00:27:32] 2025-10-08 04:26:13,336 | INFO     | PID=1955800 has CPU usage=8.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-08 00:27:32] 2025-10-08 04:26:13,336 | INFO     | .. there are 22 such processes running
[2025-10-08 00:27:32] 2025-10-08 04:26:14,336 | INFO     | time since job start (5158s) is within the limit (172800.0s)
[2025-10-08 00:27:32] 2025-10-08 04:26:14,758 | INFO     | monitor loop #352: job 0:6830522109 is in state 'finished'
[2025-10-08 00:27:32] 2025-10-08 04:26:14,759 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 00:27:32] 2025-10-08 04:26:16,345 | INFO     | time since job start (5160s) is within the limit (172800.0s)
[2025-10-08 00:27:32] 2025-10-08 04:26:17,263 | INFO     | monitor loop #353: job 0:6830522109 is in state 'finished'
[2025-10-08 00:27:32] 2025-10-08 04:26:17,264 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 00:27:32] 2025-10-08 04:26:18,353 | INFO     | time since job start (5162s) is within the limit (172800.0s)
[2025-10-08 00:27:32] 2025-10-08 04:26:19,768 | INFO     | monitor loop #354: job 0:6830522109 is in state 'finished'
[2025-10-08 00:27:32] 2025-10-08 04:26:19,769 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 00:27:32] 2025-10-08 04:26:20,359 | INFO     | time since job start (5164s) is within the limit (172800.0s)
[2025-10-08 00:27:32] 2025-10-08 04:26:22,273 | INFO     | monitor loop #355: job 0:6830522109 is in state 'finished'
[2025-10-08 00:27:32] 2025-10-08 04:26:22,274 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 00:27:32] 2025-10-08 04:26:22,366 | INFO     | time since job start (5166s) is within the limit (172800.0s)
[2025-10-08 00:27:32] 2025-10-08 04:26:24,373 | INFO     | time since job start (5168s) is within the limit (172800.0s)
[2025-10-08 00:27:32] 2025-10-08 04:26:24,778 | INFO     | monitor loop #356: job 0:6830522109 is in state 'finished'
[2025-10-08 00:27:32] 2025-10-08 04:26:24,779 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 00:27:32] 2025-10-08 04:26:26,386 | INFO     | time since job start (5170s) is within the limit (172800.0s)
[2025-10-08 00:27:32] 2025-10-08 04:26:27,283 | INFO     | monitor loop #357: job 0:6830522109 is in state 'finished'
[2025-10-08 00:27:32] 2025-10-08 04:26:27,284 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 00:27:32] 2025-10-08 04:26:28,393 | INFO     | time since job start (5172s) is within the limit (172800.0s)
[2025-10-08 00:27:32] 2025-10-08 04:26:29,788 | INFO     | monitor loop #358: job 0:6830522109 is in state 'finished'
[2025-10-08 00:27:32] 2025-10-08 04:26:29,789 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 00:27:32] 2025-10-08 04:26:30,400 | INFO     | time since job start (5174s) is within the limit (172800.0s)
[2025-10-08 00:27:32] 2025-10-08 04:26:32,293 | INFO     | monitor loop #359: job 0:6830522109 is in state 'finished'
[2025-10-08 00:27:32] 2025-10-08 04:26:32,294 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 00:27:32] 2025-10-08 04:26:32,407 | INFO     | time since job start (5176s) is within the limit (172800.0s)
[2025-10-08 00:27:32] 2025-10-08 04:26:34,423 | INFO     | time since job start (5178s) is within the limit (172800.0s)
[2025-10-08 00:27:32] 2025-10-08 04:26:34,804 | INFO     | monitor loop #360: job 0:6830522109 is in state 'finished'
[2025-10-08 00:27:32] 2025-10-08 04:26:34,805 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-08 00:27:32] 2025-10-08 04:26:36,166 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-08 00:27:32] 2025-10-08 04:26:36,183 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3800.0004140625015
[2025-10-08 00:27:32] 2025-10-08 04:26:36,204 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6830522109/memory_monitor_summary.json (trf name=prmon)
[2025-10-08 00:27:32] 2025-10-08 04:26:36,205 | INFO     | extracted standard info from prmon json
[2025-10-08 00:27:32] 2025-10-08 04:26:36,205 | INFO     | extracted standard memory fields from prmon json
[2025-10-08 00:27:32] 2025-10-08 04:26:36,205 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-08 00:27:32] 2025-10-08 04:26:36,205 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-08 00:27:32] 2025-10-08 04:26:36,205 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-08 00:27:32] 2025-10-08 04:26:36,206 | INFO     | fitting pss+swap vs Time
[2025-10-08 00:27:32] 2025-10-08 04:26:36,207 | INFO     | sum of square deviations: 136107352.6710525
[2025-10-08 00:27:32] 2025-10-08 04:26:36,207 | INFO     | sum of deviations: -8619364372.355265
[2025-10-08 00:27:32] 2025-10-08 04:26:36,207 | INFO     | mean x: 1759895097.5657895
[2025-10-08 00:27:32] 2025-10-08 04:26:36,207 | INFO     | mean y: 2672206.1710526315
[2025-10-08 00:27:32] 2025-10-08 04:26:36,207 | INFO     | -- intersect: 111452765131.73466
[2025-10-08 00:27:32] 2025-10-08 04:26:36,207 | INFO     | intersect: 111452765131.73466
[2025-10-08 00:27:32] 2025-10-08 04:26:36,207 | INFO     | chi2: 0.11595345072335267
[2025-10-08 00:27:32] 2025-10-08 04:26:36,207 | INFO     | -- intersect: 111452765131.73466
[2025-10-08 00:27:32] 2025-10-08 04:26:36,207 | INFO     | current memory leak: -63.33 B/s (using 76 data points, chi2=0.12)
[2025-10-08 00:27:32] 2025-10-08 04:26:36,207 | INFO     | could have reported an average CPU frequency of 3785 MHz (6 samples)
[2025-10-08 00:27:32] 2025-10-08 04:26:36,207 | INFO     | ..............................
[2025-10-08 00:27:32] 2025-10-08 04:26:36,207 | INFO     | . Timing measurements:
[2025-10-08 00:27:32] 2025-10-08 04:26:36,207 | INFO     | . get job = 0 s
[2025-10-08 00:27:32] 2025-10-08 04:26:36,208 | INFO     | . initial setup = 4 s
[2025-10-08 00:27:32] 2025-10-08 04:26:36,208 | INFO     | . payload setup = 29 s
[2025-10-08 00:27:32] 2025-10-08 04:26:36,208 | INFO     | . stage-in = 0 s
[2025-10-08 00:27:32] 2025-10-08 04:26:36,208 | INFO     | . payload execution = 5069 s
[2025-10-08 00:27:32] 2025-10-08 04:26:36,208 | INFO     | . stage-out = 1 s
[2025-10-08 00:27:32] 2025-10-08 04:26:36,208 | INFO     | . log creation = 0 s
[2025-10-08 00:27:32] 2025-10-08 04:26:36,208 | INFO     | ..............................
[2025-10-08 00:27:32] 2025-10-08 04:26:36,446 | INFO     | 
[2025-10-08 00:27:32] 2025-10-08 04:26:36,447 | INFO     | job summary report
[2025-10-08 00:27:32] 2025-10-08 04:26:36,447 | INFO     | --------------------------------------------------
[2025-10-08 00:27:32] 2025-10-08 04:26:36,447 | INFO     | PanDA job id: 6830522109
[2025-10-08 00:27:32] 2025-10-08 04:26:36,447 | INFO     | task id: 46376905
[2025-10-08 00:27:32] 2025-10-08 04:26:36,447 | INFO     | errors: (none)
[2025-10-08 00:27:32] 2025-10-08 04:26:36,447 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-08 00:27:32] 2025-10-08 04:26:36,447 | INFO     | pilot state: finished 
[2025-10-08 00:27:32] 2025-10-08 04:26:36,447 | INFO     | transexitcode: 0
[2025-10-08 00:27:32] 2025-10-08 04:26:36,447 | INFO     | exeerrorcode: 0
[2025-10-08 00:27:32] 2025-10-08 04:26:36,447 | INFO     | exeerrordiag: 
[2025-10-08 00:27:32] 2025-10-08 04:26:36,447 | INFO     | exitcode: 0
[2025-10-08 00:27:32] 2025-10-08 04:26:36,447 | INFO     | exitmsg: OK
[2025-10-08 00:27:32] 2025-10-08 04:26:36,447 | INFO     | cpuconsumptiontime: 20298 s
[2025-10-08 00:27:32] 2025-10-08 04:26:36,447 | INFO     | nevents: 400
[2025-10-08 00:27:32] 2025-10-08 04:26:36,447 | INFO     | neventsw: 0
[2025-10-08 00:27:32] 2025-10-08 04:26:36,447 | INFO     | pid: 1963088
[2025-10-08 00:27:32] 2025-10-08 04:26:36,447 | INFO     | pgrp: 1963088
[2025-10-08 00:27:32] 2025-10-08 04:26:36,447 | INFO     | corecount: 11
[2025-10-08 00:27:32] 2025-10-08 04:26:36,447 | INFO     | event service: False
[2025-10-08 00:27:32] 2025-10-08 04:26:36,447 | INFO     | sizes: {0: 2347988, 1: 2348844, 12: 2348844, 18: 2349134, 22: 2349162, 5103: 2375798, 5106: 2384852, 5140: 2384990}
[2025-10-08 00:27:32] 2025-10-08 04:26:36,447 | INFO     | --------------------------------------------------
[2025-10-08 00:27:32] 2025-10-08 04:26:36,447 | INFO     | 
[2025-10-08 00:27:32] 2025-10-08 04:26:36,447 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-08 00:27:32] 2025-10-08 04:26:36,528 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-08 00:27:32] 2025-10-08 04:26:36,528 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-08 00:27:32] 2025-10-08 04:26:36,528 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-08 00:27:32] 2025-10-08 04:26:36,528 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-08 00:27:32] 2025-10-08 04:26:36,528 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-08 00:27:32] 2025-10-08 04:26:36,528 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-08 00:27:32] 2025-10-08 04:26:36,530 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-08 00:27:32] 2025-10-08 04:26:36,530 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-08 00:27:32] 2025-10-08 04:26:36,530 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-08 00:27:32] 2025-10-08 04:26:36,530 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-08 00:27:32] 2025-10-08 04:26:36,530 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-08 00:27:32] 2025-10-08 04:26:36,530 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-08 00:27:32] 2025-10-08 04:26:36,530 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-08 00:27:32] 2025-10-08 04:26:36,530 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-08 00:27:32] 2025-10-08 04:26:36,530 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-08 00:27:32] 2025-10-08 04:26:36,530 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-08 00:27:32] 2025-10-08 04:26:36,530 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-08 00:27:32] 2025-10-08 04:26:36,530 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-08 00:27:32] 2025-10-08 04:26:36,530 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-08 00:27:32] 2025-10-08 04:26:36,530 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-08 00:27:32] 2025-10-08 04:26:36,531 | INFO     | job 6830522109 has completed (purged errors)
[2025-10-08 00:27:32] 2025-10-08 04:26:36,531 | INFO     | overall cleanup function is called
[2025-10-08 00:27:32] 2025-10-08 04:26:36,855 | INFO     | PID=1955800 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-08 00:27:32] 2025-10-08 04:26:36,859 | INFO     | .. there are 22 such processes running
[2025-10-08 00:27:32] 2025-10-08 04:26:37,551 | INFO     | --- collectZombieJob: --- 10, [1963088]
[2025-10-08 00:27:32] 2025-10-08 04:26:37,552 | INFO     | zombie collector waiting for pid 1963088
[2025-10-08 00:27:32] 2025-10-08 04:26:37,552 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-08 00:27:32] 2025-10-08 04:26:37,552 | INFO     | collected zombie processes
[2025-10-08 00:27:32] 2025-10-08 04:26:37,552 | INFO     | will attempt to kill all subprocesses of pid=1963088
[2025-10-08 00:27:32] 2025-10-08 04:26:38,413 | INFO     | process IDs to be killed: [1963088] (in reverse order)
[2025-10-08 00:27:32] 2025-10-08 04:26:38,767 | WARNING  | found no corresponding commands to process id(s)
[2025-10-08 00:27:32] 2025-10-08 04:26:38,767 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-08 00:27:32] 2025-10-08 04:26:38,801 | INFO     | did not find any defunct processes belonging to 1963088
[2025-10-08 00:27:32] 2025-10-08 04:26:38,839 | INFO     | did not find any defunct processes belonging to 1963088
[2025-10-08 00:27:32] 2025-10-08 04:26:38,839 | INFO     | ready for new job
[2025-10-08 00:27:32] 2025-10-08 04:26:38,839 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-08 00:27:32] 2025-10-08 04:26:38,840 | INFO     | ***************************************
[2025-10-08 00:27:32] 2025-10-08 04:26:38,841 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-08 00:27:32] 2025-10-08 04:26:38,841 | INFO     | ***************************************
[2025-10-08 00:27:32] 2025-10-08 04:26:38,841 | INFO     | 
[2025-10-08 00:27:32] 2025-10-08 04:26:38,854 | INFO     | architecture information:
[2025-10-08 00:27:32] 2025-10-08 04:26:38,854 | INFO     | executing command: cat /etc/os-release
[2025-10-08 00:27:32] 2025-10-08 04:26:38,890 | INFO     | cat /etc/os-release:
[2025-10-08 00:27:32] NAME="CentOS Linux"
[2025-10-08 00:27:32] VERSION="7 (Core)"
[2025-10-08 00:27:32] ID="centos"
[2025-10-08 00:27:32] ID_LIKE="rhel fedora"
[2025-10-08 00:27:32] VERSION_ID="7"
[2025-10-08 00:27:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-08 00:27:32] ANSI_COLOR="0;31"
[2025-10-08 00:27:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-08 00:27:32] HOME_URL="https://www.centos.org/"
[2025-10-08 00:27:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-08 00:27:32] 
[2025-10-08 00:27:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-08 00:27:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-08 00:27:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-08 00:27:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-08 00:27:32] 
[2025-10-08 00:27:32] 2025-10-08 04:26:38,891 | INFO     | ***************************************
[2025-10-08 00:27:32] 2025-10-08 04:26:39,395 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-08 00:27:32] 2025-10-08 04:26:39,434 | INFO     | sufficient remaining disk space (170646306816 B)
[2025-10-08 00:27:32] 2025-10-08 04:26:39,434 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-08 00:27:32] 2025-10-08 04:26:39,434 | INFO     | current server update state: UPDATING_FINAL
[2025-10-08 00:27:32] 2025-10-08 04:26:39,434 | INFO     | update_server=False
[2025-10-08 00:27:32] 2025-10-08 04:26:39,434 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-08 00:27:32] 2025-10-08 04:26:39,434 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-08 00:27:32] 2025-10-08 04:26:39,729 | INFO     | all data control threads have been joined
[2025-10-08 00:27:32] 2025-10-08 04:26:39,859 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-08 00:27:32] 2025-10-08 04:26:39,860 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-08 00:27:32] 2025-10-08 04:26:39,860 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-08 00:27:32] 2025-10-08 04:26:39,860 | INFO     | will abort loop
[2025-10-08 00:27:32] 2025-10-08 04:26:39,869 | INFO     | all job control threads have been joined
[2025-10-08 00:27:32] 2025-10-08 04:26:40,158 | INFO     | all payload control threads have been joined
[2025-10-08 00:27:32] 2025-10-08 04:26:40,453 | INFO     | [job] retrieve thread has finished
[2025-10-08 00:27:32] 2025-10-08 04:26:40,568 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-08 00:27:32] 2025-10-08 04:26:40,646 | INFO     | [job] validate thread has finished
[2025-10-08 00:27:32] 2025-10-08 04:26:40,735 | INFO     | [data] control thread has finished
[2025-10-08 00:27:32] 2025-10-08 04:26:40,814 | INFO     | [data] copytool_in thread has finished
[2025-10-08 00:27:32] 2025-10-08 04:26:40,865 | INFO     | [job] job monitor thread has finished
[2025-10-08 00:27:32] 2025-10-08 04:26:40,875 | INFO     | [job] control thread has finished
[2025-10-08 00:27:32] 2025-10-08 04:26:41,164 | INFO     | [payload] control thread has finished
[2025-10-08 00:27:32] 2025-10-08 04:26:41,284 | INFO     | [payload] execute_payloads thread has finished
[2025-10-08 00:27:32] 2025-10-08 04:26:41,344 | INFO     | [payload] validate_pre thread has finished
[2025-10-08 00:27:32] 2025-10-08 04:26:41,391 | INFO     | [payload] validate_post thread has finished
[2025-10-08 00:27:32] 2025-10-08 04:26:41,457 | INFO     | [data] copytool_out thread has finished
[2025-10-08 00:27:32] 2025-10-08 04:26:41,460 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-08 00:27:32] 2025-10-08 04:26:41,501 | INFO     | [job] create_data_payload thread has finished
[2025-10-08 00:27:32] 2025-10-08 04:26:41,586 | INFO     | [payload] failed_post thread has finished
[2025-10-08 00:27:32] 2025-10-08 04:26:42,466 | INFO     | [job] queue monitor thread has finished
[2025-10-08 00:27:32] 2025-10-08 04:26:44,576 | INFO     | [data] queue_monitor thread has finished
[2025-10-08 00:27:32] 2025-10-08 04:26:50,357 | INFO     | job.realtimelogging is not enabled
[2025-10-08 00:27:32] 2025-10-08 04:26:51,362 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-08 00:27:32] 2025-10-08 04:27:09,932 | INFO     | PID=1955800 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-08 00:27:32] 2025-10-08 04:27:09,933 | INFO     | .. there are 22 such processes running
[2025-10-08 00:27:32] 2025-10-08 04:27:09,933 | INFO     | found 0 job(s) in 20 queues
[2025-10-08 00:27:32] 2025-10-08 04:27:09,933 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-08 00:27:32] 2025-10-08 04:27:09,934 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-08 00:27:32] 2025-10-08 04:27:24,580 | INFO     | [monitor] cgroup control has ended
[2025-10-08 00:27:32] 2025-10-08 04:27:25,586 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140673589958464)>', '<ExcThread(monitor, started 140672652797696)>']
[2025-10-08 00:27:32] 2025-10-08 04:27:26,059 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-08 00:27:32] 2025-10-08 04:27:26,060 | INFO     | [monitor] control thread has ended
[2025-10-08 00:27:32] 2025-10-08 04:27:30,612 | INFO     | all workflow threads have been joined
[2025-10-08 00:27:32] 2025-10-08 04:27:30,617 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-08 00:27:32] 2025-10-08 04:27:30,618 | INFO     | traces error code: 0
[2025-10-08 00:27:32] 2025-10-08 04:27:30,618 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-08 00:27:32] 2025-10-08 04:27:31,309 [wrapper] ==== pilot stdout END ====
[2025-10-08 00:27:32] 2025-10-08 04:27:31,322 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-08 00:27:32] 2025-10-08 04:27:31,366 [wrapper] pilotpid: 1955800
[2025-10-08 00:27:32] 2025-10-08 04:27:31,417 [wrapper] Pilot exit status: 0
[2025-10-08 00:27:32] 2025-10-08 04:27:31,509 [wrapper] pandaids: 6830522109
[2025-10-08 00:27:32] 2025-10-08 04:27:31,700 [wrapper] cleanup supervisor_pilot 2179307 1955801
[2025-10-08 00:27:32] 2025-10-08 04:27:31,719 [wrapper] Test setup, not cleaning
[2025-10-08 00:27:32] 2025-10-08 04:27:31,736 [wrapper] apfmon messages muted
[2025-10-08 00:27:32] 2025-10-08 04:27:31,747 [wrapper] ==== wrapper stdout END ====
[2025-10-08 00:27:32] 2025-10-08 04:27:31,760 [wrapper] ==== wrapper stderr END ====
[2025-10-08 00:27:32]  *** Error codes and diagnostics ***
[2025-10-08 00:27:32]     "exeErrorCode": 0,
[2025-10-08 00:27:32]     "exeErrorDiag": "",
[2025-10-08 00:27:32]     "pilotErrorCode": 0,
[2025-10-08 00:27:32]     "pilotErrorDiag": "",
[2025-10-08 00:27:32]  *** Listing of results directory ***
[2025-10-08 00:27:32] total 388708
[2025-10-08 00:27:32] -rw-r--r--. 1 boincer umatlas    552446 Oct  4 19:31 pilot3.tar.gz
[2025-10-08 00:27:32] -rw-r--r--. 1 boincer umatlas      5112 Oct  4 19:34 queuedata.json
[2025-10-08 00:27:32] -rwx------. 1 boincer umatlas     36292 Oct  4 19:35 runpilot2-wrapper.sh
[2025-10-08 00:27:32] -rw-r--r--. 1 boincer umatlas       100 Oct  7 22:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-08 00:27:32] -rwxr-xr-x. 1 boincer umatlas      7986 Oct  7 22:59 run_atlas
[2025-10-08 00:27:32] -rw-r--r--. 1 boincer umatlas       105 Oct  7 22:59 job.xml
[2025-10-08 00:27:32] -rw-r--r--. 2 boincer umatlas 214254824 Oct  7 22:59 EVNT.46376901._002552.pool.root.1
[2025-10-08 00:27:32] -rw-r--r--. 2 boincer umatlas     15120 Oct  7 22:59 start_atlas.sh
[2025-10-08 00:27:32] drwxrwx--x. 2 boincer umatlas      4096 Oct  7 22:59 shared
[2025-10-08 00:27:32] -rw-r--r--. 2 boincer umatlas    565599 Oct  7 22:59 input.tar.gz
[2025-10-08 00:27:32] -rw-r--r--. 1 boincer umatlas         0 Oct  7 22:59 boinc_lockfile
[2025-10-08 00:27:32] -rw-r--r--. 1 boincer umatlas      2519 Oct  7 22:59 pandaJob.out
[2025-10-08 00:27:32] -rw-------. 1 boincer umatlas    979841 Oct  7 23:00 agis_schedconf.cvmfs.json
[2025-10-08 00:27:32] -rw-------. 1 boincer umatlas   1560401 Oct  7 23:00 agis_ddmendpoints.agis.ALL.json
[2025-10-08 00:27:32] drwx------. 4 boincer umatlas      4096 Oct  7 23:00 pilot3
[2025-10-08 00:27:32] -rw-r--r--. 1 boincer umatlas      7173 Oct  8 00:22 init_data.xml
[2025-10-08 00:27:32] -rw-------. 1 boincer umatlas 177716624 Oct  8 00:25 HITS.46376905._070310.pool.root.1
[2025-10-08 00:27:32] -rw-r--r--. 1 boincer umatlas       530 Oct  8 00:25 boinc_task_state.xml
[2025-10-08 00:27:32] -rw-------. 1 boincer umatlas      1039 Oct  8 00:25 memory_monitor_summary.json
[2025-10-08 00:27:32] -rw-------. 1 boincer umatlas    377174 Oct  8 00:26 log.46376905._070310.job.log.tgz.1
[2025-10-08 00:27:32] -rw-------. 1 boincer umatlas      7797 Oct  8 00:26 heartbeat.json
[2025-10-08 00:27:32] -rw-------. 1 boincer umatlas        95 Oct  8 00:27 pilot_heartbeat.json
[2025-10-08 00:27:32] -rw-r--r--. 1 boincer umatlas      8192 Oct  8 00:27 boinc_mmap_file
[2025-10-08 00:27:32] -rw-r--r--. 1 boincer umatlas        27 Oct  8 00:27 wrapper_checkpoint.txt
[2025-10-08 00:27:32] -rw-------. 1 boincer umatlas      5083 Oct  8 00:27 pilotlog.txt
[2025-10-08 00:27:32] -rw-------. 1 boincer umatlas    708843 Oct  8 00:27 log.46376905._070310.job.log.1
[2025-10-08 00:27:32] -rw-------. 1 boincer umatlas       357 Oct  8 00:27 output.list
[2025-10-08 00:27:32] -rw-r--r--. 1 boincer umatlas       620 Oct  8 00:27 runtime_log
[2025-10-08 00:27:32] -rw-------. 1 boincer umatlas   1105920 Oct  8 00:27 result.tar.gz
[2025-10-08 00:27:32] -rw-------. 1 boincer umatlas       655 Oct  8 00:27 xdQLDmfxQP8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmT0MNDmUHHe7n.diag
[2025-10-08 00:27:32] -rw-r--r--. 1 boincer umatlas      8705 Oct  8 00:27 runtime_log.err
[2025-10-08 00:27:32] -rw-r--r--. 1 boincer umatlas     22355 Oct  8 00:27 stderr.txt
[2025-10-08 00:27:32] HITS file was successfully produced:
[2025-10-08 00:27:32] -rw-------. 1 boincer umatlas 177716624 Oct  8 00:25 shared/HITS.pool.root.1
[2025-10-08 00:27:32]  *** Contents of shared directory: ***
[2025-10-08 00:27:32] total 384444
[2025-10-08 00:27:32] -rw-r--r--. 2 boincer umatlas 214254824 Oct  7 22:59 ATLAS.root_0
[2025-10-08 00:27:32] -rw-r--r--. 2 boincer umatlas     15120 Oct  7 22:59 start_atlas.sh
[2025-10-08 00:27:32] -rw-r--r--. 2 boincer umatlas    565599 Oct  7 22:59 input.tar.gz
[2025-10-08 00:27:32] -rw-------. 1 boincer umatlas 177716624 Oct  8 00:25 HITS.pool.root.1
[2025-10-08 00:27:32] -rw-------. 1 boincer umatlas   1105920 Oct  8 00:27 result.tar.gz
00:27:33 (1949416): run_atlas exited; CPU time 20423.950172
00:27:33 (1949416): called boinc_finish(0)

</stderr_txt>
]]>

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