Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:26:00 (5446): wrapper (7.7.26015): starting
22:26:00 (5446): wrapper: running run_atlas (--nthreads 8)
[2025-10-07 22:26:00] Arguments: --nthreads 8
[2025-10-07 22:26:00] Threads: 8
[2025-10-07 22:26:00] Checking for CVMFS
[2025-10-07 22:26:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 22:26:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 22:26:00] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 22:26:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 22:26:00] 2.11.2.0 3213 621456 248084 151455 0 1 14733420 20275200 1 130560 1 344929464 99.992 25844276 20074 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-07 22:26:00] CVMFS is ok
[2025-10-07 22:26:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-07 22:26:00] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-07 22:26:00] Further information can be found at the LHC@home message board.
[2025-10-07 22:26:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 22:26:00] Checking for apptainer binary...
[2025-10-07 22:26:00] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-07 22:26:00] Running /usr/bin/apptainer --version
[2025-10-07 22:26:00] apptainer version 1.3.2-1.el7
[2025-10-07 22:26:00] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 22:26:01] c-205-38.aglt2.org
[2025-10-07 22:26:01] apptainer works
[2025-10-07 22:26:01] Set ATHENA_PROC_NUMBER=8
[2025-10-07 22:26:01] Set ATHENA_CORE_NUMBER=8
[2025-10-07 22:26:01] Starting ATLAS job with PandaID=6830683665
[2025-10-07 22:26:01] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 23:27:22]  *** The last 200 lines of the pilot log: ***
[2025-10-07 23:27:22]  status_code=0
[2025-10-07 23:27:22]  storage_token=
[2025-10-07 23:27:22]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6830683665/log.46376994._019538.job.log.tgz.1
[2025-10-07 23:27:22]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/80/9a/log.46376994._019538.job.log.tgz.1
[2025-10-07 23:27:22]  workdir=None
[2025-10-07 23:27:22] ]
[2025-10-07 23:27:22] 2025-10-08 03:26:40,008 | INFO     | transferring file log.46376994._019538.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6830683665/log.46376994._019538.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-07 23:27:22] 2025-10-08 03:26:40,008 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6830683665/log.46376994._019538.job.log.tgz.1 /tmp/boinchome/slots/0/log.46376994._019538.job
[2025-10-07 23:27:22] 2025-10-08 03:26:40,025 | INFO     | adding to output.list: log.46376994._019538.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/80/9a/log.46376994._019538.job.log.tg
[2025-10-07 23:27:22] 2025-10-08 03:26:40,026 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-07 23:27:22] 2025-10-08 03:26:40,026 | INFO     | summary of transferred files:
[2025-10-07 23:27:22] 2025-10-08 03:26:40,026 | INFO     |  -- lfn=log.46376994._019538.job.log.tgz.1, status_code=0, status=transferred
[2025-10-07 23:27:22] 2025-10-08 03:26:40,026 | INFO     | stage-out finished correctly
[2025-10-07 23:27:22] 2025-10-08 03:26:40,281 | INFO     | time since job start (3629s) is within the limit (172800.0s)
[2025-10-07 23:27:22] 2025-10-08 03:26:40,546 | WARNING  | process 24146 can no longer be monitored (due to stat problems) - aborting
[2025-10-07 23:27:22] 2025-10-08 03:26:40,547 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6830683665/memory_monitor_summary.json (trf name=prmon)
[2025-10-07 23:27:22] 2025-10-08 03:26:40,627 | INFO     | number of running child processes to parent process 24146: 1
[2025-10-07 23:27:22] 2025-10-08 03:26:40,627 | INFO     | maximum number of monitored processes: 6
[2025-10-07 23:27:22] 2025-10-08 03:26:41,408 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-07 23:27:22] 2025-10-08 03:26:41,639 | INFO     | job 6830683665 has state=finished
[2025-10-07 23:27:22] 2025-10-08 03:26:41,640 | INFO     | preparing for final server update for job 6830683665 in state='finished'
[2025-10-07 23:27:22] 2025-10-08 03:26:41,706 | INFO     | sent prmon JSON dictionary to logstash server (urllib method)
[2025-10-07 23:27:22] 2025-10-08 03:26:41,706 | INFO     | this job has now completed (state=finished)
[2025-10-07 23:27:22] 2025-10-08 03:26:41,706 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-07 23:27:22] 2025-10-08 03:26:41,707 | INFO     | log transfer has been attempted: DONE
[2025-10-07 23:27:22] 2025-10-08 03:26:41,707 | INFO     | job 6830683665 has finished - writing final server update
[2025-10-07 23:27:22] 2025-10-08 03:26:41,707 | INFO     | total number of processed events: 400 (read)
[2025-10-07 23:27:22] 2025-10-08 03:26:41,708 | INFO     | executing command: lscpu
[2025-10-07 23:27:22] 2025-10-08 03:26:41,738 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-07 23:27:22] 2025-10-08 03:26:42,288 | INFO     | time since job start (3631s) is within the limit (172800.0s)
[2025-10-07 23:27:22] 2025-10-08 03:26:43,130 | INFO     | monitor loop #275: job 0:6830683665 is in state 'finished'
[2025-10-07 23:27:22] 2025-10-08 03:26:43,130 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 23:27:22] 2025-10-08 03:26:44,293 | INFO     | time since job start (3633s) is within the limit (172800.0s)
[2025-10-07 23:27:22] 2025-10-08 03:26:44,294 | INFO     | 3635s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-10-07 23:27:22] 2025-10-08 03:26:45,634 | INFO     | monitor loop #276: job 0:6830683665 is in state 'finished'
[2025-10-07 23:27:22] 2025-10-08 03:26:45,634 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 23:27:22] 2025-10-08 03:26:46,299 | INFO     | time since job start (3635s) is within the limit (172800.0s)
[2025-10-07 23:27:22] 2025-10-08 03:26:47,666 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-07 23:27:22] 2025-10-08 03:26:47,670 | INFO     | found 16 cores (8 cores per socket, 2 sockets) , CPU MHz: 1377.4776250000002
[2025-10-07 23:27:22] 2025-10-08 03:26:47,674 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6830683665/memory_monitor_summary.json (trf name=prmon)
[2025-10-07 23:27:22] 2025-10-08 03:26:47,675 | INFO     | extracted standard info from prmon json
[2025-10-07 23:27:22] 2025-10-08 03:26:47,676 | INFO     | extracted standard memory fields from prmon json
[2025-10-07 23:27:22] 2025-10-08 03:26:47,676 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-07 23:27:22] 2025-10-08 03:26:47,676 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-07 23:27:22] 2025-10-08 03:26:47,676 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 23:27:22] 2025-10-08 03:26:47,678 | INFO     | fitting pss+swap vs Time
[2025-10-07 23:27:22] 2025-10-08 03:26:47,679 | INFO     | sum of square deviations: 46147842.0
[2025-10-07 23:27:22] 2025-10-08 03:26:47,679 | INFO     | sum of deviations: -1009407504.0
[2025-10-07 23:27:22] 2025-10-08 03:26:47,679 | INFO     | mean x: 1759892284.0
[2025-10-07 23:27:22] 2025-10-08 03:26:47,679 | INFO     | mean y: 2639325.4716981133
[2025-10-07 23:27:22] 2025-10-08 03:26:47,680 | INFO     | -- intersect: 38497364121.08184
[2025-10-07 23:27:22] 2025-10-08 03:26:47,680 | INFO     | intersect: 38497364121.08184
[2025-10-07 23:27:22] 2025-10-08 03:26:47,680 | INFO     | chi2: 0.029534856428705635
[2025-10-07 23:27:22] 2025-10-08 03:26:47,680 | INFO     | -- intersect: 38497364121.08184
[2025-10-07 23:27:22] 2025-10-08 03:26:47,680 | INFO     | current memory leak: -21.87 B/s (using 53 data points, chi2=0.03)
[2025-10-07 23:27:22] 2025-10-08 03:26:47,681 | INFO     | could have reported an average CPU frequency of 2195 MHz (5 samples)
[2025-10-07 23:27:22] 2025-10-08 03:26:47,681 | INFO     | ..............................
[2025-10-07 23:27:22] 2025-10-08 03:26:47,681 | INFO     | . Timing measurements:
[2025-10-07 23:27:22] 2025-10-08 03:26:47,681 | INFO     | . get job = 0 s
[2025-10-07 23:27:22] 2025-10-08 03:26:47,681 | INFO     | . initial setup = 2 s
[2025-10-07 23:27:22] 2025-10-08 03:26:47,681 | INFO     | . payload setup = 3 s
[2025-10-07 23:27:22] 2025-10-08 03:26:47,681 | INFO     | . stage-in = 0 s
[2025-10-07 23:27:22] 2025-10-08 03:26:47,681 | INFO     | . payload execution = 3604 s
[2025-10-07 23:27:22] 2025-10-08 03:26:47,682 | INFO     | . stage-out = 0 s
[2025-10-07 23:27:22] 2025-10-08 03:26:47,682 | INFO     | . log creation = 0 s
[2025-10-07 23:27:22] 2025-10-08 03:26:47,682 | INFO     | ..............................
[2025-10-07 23:27:22] 2025-10-08 03:26:48,011 | INFO     | 
[2025-10-07 23:27:22] 2025-10-08 03:26:48,011 | INFO     | job summary report
[2025-10-07 23:27:22] 2025-10-08 03:26:48,012 | INFO     | --------------------------------------------------
[2025-10-07 23:27:22] 2025-10-08 03:26:48,012 | INFO     | PanDA job id: 6830683665
[2025-10-07 23:27:22] 2025-10-08 03:26:48,012 | INFO     | task id: 46376994
[2025-10-07 23:27:22] 2025-10-08 03:26:48,012 | INFO     | errors: (none)
[2025-10-07 23:27:22] 2025-10-08 03:26:48,012 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 23:27:22] 2025-10-08 03:26:48,012 | INFO     | pilot state: finished 
[2025-10-07 23:27:22] 2025-10-08 03:26:48,012 | INFO     | transexitcode: 0
[2025-10-07 23:27:22] 2025-10-08 03:26:48,013 | INFO     | exeerrorcode: 0
[2025-10-07 23:27:22] 2025-10-08 03:26:48,013 | INFO     | exeerrordiag: 
[2025-10-07 23:27:22] 2025-10-08 03:26:48,013 | INFO     | exitcode: 0
[2025-10-07 23:27:22] 2025-10-08 03:26:48,013 | INFO     | exitmsg: OK
[2025-10-07 23:27:22] 2025-10-08 03:26:48,013 | INFO     | cpuconsumptiontime: 26546 s
[2025-10-07 23:27:22] 2025-10-08 03:26:48,013 | INFO     | nevents: 400
[2025-10-07 23:27:22] 2025-10-08 03:26:48,013 | INFO     | neventsw: 0
[2025-10-07 23:27:22] 2025-10-08 03:26:48,013 | INFO     | pid: 24146
[2025-10-07 23:27:22] 2025-10-08 03:26:48,013 | INFO     | pgrp: 24146
[2025-10-07 23:27:22] 2025-10-08 03:26:48,014 | INFO     | corecount: 8
[2025-10-07 23:27:22] 2025-10-08 03:26:48,014 | INFO     | event service: False
[2025-10-07 23:27:22] 2025-10-08 03:26:48,014 | INFO     | sizes: {0: 2348820, 4: 2349082, 11: 2349110, 3612: 2374885, 3614: 2383883, 3615: 2383939, 3621: 2384293}
[2025-10-07 23:27:22] 2025-10-08 03:26:48,014 | INFO     | --------------------------------------------------
[2025-10-07 23:27:22] 2025-10-08 03:26:48,014 | INFO     | 
[2025-10-07 23:27:22] 2025-10-08 03:26:48,014 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-07 23:27:22] 2025-10-08 03:26:48,036 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 23:27:22] 2025-10-08 03:26:48,036 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 23:27:22] 2025-10-08 03:26:48,036 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 23:27:22] 2025-10-08 03:26:48,036 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 23:27:22] 2025-10-08 03:26:48,036 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 23:27:22] 2025-10-08 03:26:48,037 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 23:27:22] 2025-10-08 03:26:48,037 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 23:27:22] 2025-10-08 03:26:48,037 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 23:27:22] 2025-10-08 03:26:48,037 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 23:27:22] 2025-10-08 03:26:48,037 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 23:27:22] 2025-10-08 03:26:48,037 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 23:27:22] 2025-10-08 03:26:48,037 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 23:27:22] 2025-10-08 03:26:48,037 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 23:27:22] 2025-10-08 03:26:48,038 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 23:27:22] 2025-10-08 03:26:48,038 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 23:27:22] 2025-10-08 03:26:48,038 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 23:27:22] 2025-10-08 03:26:48,038 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 23:27:22] 2025-10-08 03:26:48,038 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 23:27:22] 2025-10-08 03:26:48,038 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 23:27:22] 2025-10-08 03:26:48,038 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 23:27:22] 2025-10-08 03:26:48,039 | INFO     | job 6830683665 has completed (purged errors)
[2025-10-07 23:27:22] 2025-10-08 03:26:48,039 | INFO     | overall cleanup function is called
[2025-10-07 23:27:22] 2025-10-08 03:26:49,047 | INFO     | --- collectZombieJob: --- 10, [24146]
[2025-10-07 23:27:22] 2025-10-08 03:26:49,047 | INFO     | zombie collector waiting for pid 24146
[2025-10-07 23:27:22] 2025-10-08 03:26:49,047 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 23:27:22] 2025-10-08 03:26:49,048 | INFO     | collected zombie processes
[2025-10-07 23:27:22] 2025-10-08 03:26:49,048 | INFO     | will attempt to kill all subprocesses of pid=24146
[2025-10-07 23:27:22] 2025-10-08 03:26:49,146 | INFO     | process IDs to be killed: [24146] (in reverse order)
[2025-10-07 23:27:22] 2025-10-08 03:26:49,196 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 23:27:22] 2025-10-08 03:26:49,197 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 23:27:22] 2025-10-08 03:26:49,199 | INFO     | did not find any defunct processes belonging to 24146
[2025-10-07 23:27:22] 2025-10-08 03:26:49,202 | INFO     | did not find any defunct processes belonging to 24146
[2025-10-07 23:27:22] 2025-10-08 03:26:49,202 | INFO     | ready for new job
[2025-10-07 23:27:22] 2025-10-08 03:26:49,202 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 23:27:22] 2025-10-08 03:26:49,204 | INFO     | ***************************************
[2025-10-07 23:27:22] 2025-10-08 03:26:49,205 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 23:27:22] 2025-10-08 03:26:49,205 | INFO     | ***************************************
[2025-10-07 23:27:22] 2025-10-08 03:26:49,205 | INFO     | 
[2025-10-07 23:27:22] 2025-10-08 03:26:49,206 | INFO     | architecture information:
[2025-10-07 23:27:22] 2025-10-08 03:26:49,207 | INFO     | executing command: cat /etc/os-release
[2025-10-07 23:27:22] 2025-10-08 03:26:49,221 | INFO     | cat /etc/os-release:
[2025-10-07 23:27:22] NAME="CentOS Linux"
[2025-10-07 23:27:22] VERSION="7 (Core)"
[2025-10-07 23:27:22] ID="centos"
[2025-10-07 23:27:22] ID_LIKE="rhel fedora"
[2025-10-07 23:27:22] VERSION_ID="7"
[2025-10-07 23:27:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 23:27:22] ANSI_COLOR="0;31"
[2025-10-07 23:27:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 23:27:22] HOME_URL="https://www.centos.org/"
[2025-10-07 23:27:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 23:27:22] 
[2025-10-07 23:27:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 23:27:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 23:27:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 23:27:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 23:27:22] 
[2025-10-07 23:27:22] 2025-10-08 03:26:49,221 | INFO     | ***************************************
[2025-10-07 23:27:22] 2025-10-08 03:26:49,724 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-07 23:27:22] 2025-10-08 03:26:49,741 | INFO     | sufficient remaining disk space (33262927872 B)
[2025-10-07 23:27:22] 2025-10-08 03:26:49,741 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 23:27:22] 2025-10-08 03:26:49,742 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 23:27:22] 2025-10-08 03:26:49,742 | INFO     | update_server=False
[2025-10-07 23:27:22] 2025-10-08 03:26:49,742 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 23:27:22] 2025-10-08 03:26:49,742 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 23:27:22] 2025-10-08 03:26:49,742 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 23:27:22] 2025-10-08 03:26:49,743 | INFO     | aborting loop
[2025-10-07 23:27:22] 2025-10-08 03:26:50,348 | INFO     | all job control threads have been joined
[2025-10-07 23:27:22] 2025-10-08 03:26:50,569 | INFO     | all data control threads have been joined
[2025-10-07 23:27:22] 2025-10-08 03:26:50,591 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 23:27:22] 2025-10-08 03:26:50,747 | INFO     | [job] retrieve thread has finished
[2025-10-07 23:27:22] 2025-10-08 03:26:50,748 | INFO     | [job] queue monitor thread has finished
[2025-10-07 23:27:22] 2025-10-08 03:26:50,748 | INFO     | [job] job monitor thread has finished
[2025-10-07 23:27:22] 2025-10-08 03:26:50,860 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 23:27:22] 2025-10-08 03:26:50,887 | INFO     | all payload control threads have been joined
[2025-10-07 23:27:22] 2025-10-08 03:26:51,025 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 23:27:22] 2025-10-08 03:26:51,105 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 23:27:22] 2025-10-08 03:26:51,187 | INFO     | [data] copytool_in thread has finished
[2025-10-07 23:27:22] 2025-10-08 03:26:51,354 | INFO     | [job] control thread has finished
[2025-10-07 23:27:22] 2025-10-08 03:26:51,574 | INFO     | [data] control thread has finished
[2025-10-07 23:27:22] 2025-10-08 03:26:51,892 | INFO     | [payload] control thread has finished
[2025-10-07 23:27:22] 2025-10-08 03:26:51,934 | INFO     | [payload] validate_post thread has finished
[2025-10-07 23:27:22] 2025-10-08 03:26:52,000 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 23:27:22] 2025-10-08 03:26:52,066 | INFO     | [job] validate thread has finished
[2025-10-07 23:27:22] 2025-10-08 03:26:52,071 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 23:27:22] 2025-10-08 03:26:52,076 | INFO     | [payload] failed_post thread has finished
[2025-10-07 23:27:22] 2025-10-08 03:26:52,596 | INFO     | [data] copytool_out thread has finished
[2025-10-07 23:27:22] 2025-10-08 03:26:56,006 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 23:27:22] 2025-10-08 03:27:16,463 | INFO     | [monitor] cgroup control has ended
[2025-10-07 23:27:22] 2025-10-08 03:27:17,128 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139747939804992)>', '<ExcThread(monitor, started 139747712472832)>']
[2025-10-07 23:27:22] 2025-10-08 03:27:19,500 | INFO     | PID=10732 has CPU usage=3.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-07 23:27:22] 2025-10-08 03:27:19,500 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 23:27:22] 2025-10-08 03:27:19,500 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 23:27:22] 2025-10-08 03:27:19,500 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 23:27:22] 2025-10-08 03:27:19,501 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 23:27:22] 2025-10-08 03:27:19,501 | INFO     | [monitor] control thread has ended
[2025-10-07 23:27:22] 2025-10-08 03:27:22,153 | INFO     | all workflow threads have been joined
[2025-10-07 23:27:22] 2025-10-08 03:27:22,154 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 23:27:22] 2025-10-08 03:27:22,154 | INFO     | traces error code: 0
[2025-10-07 23:27:22] 2025-10-08 03:27:22,154 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 23:27:22] 2025-10-08 03:27:22,252 [wrapper] ==== pilot stdout END ====
[2025-10-07 23:27:22] 2025-10-08 03:27:22,255 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 23:27:22] 2025-10-08 03:27:22,258 [wrapper] pilotpid: 10732
[2025-10-07 23:27:22] 2025-10-08 03:27:22,262 [wrapper] Pilot exit status: 0
[2025-10-07 23:27:22] 2025-10-08 03:27:22,273 [wrapper] pandaids: 6830683665
[2025-10-07 23:27:22] 2025-10-08 03:27:22,303 [wrapper] cleanup supervisor_pilot 26778 10733
[2025-10-07 23:27:22] 2025-10-08 03:27:22,306 [wrapper] Test setup, not cleaning
[2025-10-07 23:27:22] 2025-10-08 03:27:22,310 [wrapper] apfmon messages muted
[2025-10-07 23:27:22] 2025-10-08 03:27:22,313 [wrapper] ==== wrapper stdout END ====
[2025-10-07 23:27:22] 2025-10-08 03:27:22,317 [wrapper] ==== wrapper stderr END ====
[2025-10-07 23:27:22]  *** Error codes and diagnostics ***
[2025-10-07 23:27:22]     "exeErrorCode": 0,
[2025-10-07 23:27:22]     "exeErrorDiag": "",
[2025-10-07 23:27:22]     "pilotErrorCode": 0,
[2025-10-07 23:27:22]     "pilotErrorDiag": "",
[2025-10-07 23:27:22]  *** Listing of results directory ***
[2025-10-07 23:27:22] total 419732
[2025-10-07 23:27:22] -rw-r--r-- 1 boincer umatlas    552446 Oct  4 21:02 pilot3.tar.gz
[2025-10-07 23:27:22] -rwx------ 1 boincer umatlas     36292 Oct  4 21:07 runpilot2-wrapper.sh
[2025-10-07 23:27:22] -rw-r--r-- 1 boincer umatlas      5112 Oct  4 21:07 queuedata.json
[2025-10-07 23:27:22] -rw-r--r-- 1 boincer umatlas       100 Oct  7 22:25 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 23:27:22] -rwxr-xr-x 1 boincer umatlas      7986 Oct  7 22:25 run_atlas
[2025-10-07 23:27:22] -rw-r--r-- 1 boincer umatlas       105 Oct  7 22:25 job.xml
[2025-10-07 23:27:22] -rw-r--r-- 2 boincer umatlas     15120 Oct  7 22:26 start_atlas.sh
[2025-10-07 23:27:22] drwxrwx--x 2 boincer umatlas      4096 Oct  7 22:26 shared
[2025-10-07 23:27:22] -rw-r--r-- 2 boincer umatlas    565612 Oct  7 22:26 input.tar.gz
[2025-10-07 23:27:22] -rw-r--r-- 2 boincer umatlas 225627005 Oct  7 22:26 EVNT.46376992._000450.pool.root.1
[2025-10-07 23:27:22] -rw-r--r-- 1 boincer umatlas         0 Oct  7 22:26 boinc_lockfile
[2025-10-07 23:27:22] -rw-r--r-- 1 boincer umatlas      2560 Oct  7 22:26 pandaJob.out
[2025-10-07 23:27:22] -rw------- 1 boincer umatlas    979841 Oct  7 22:26 agis_schedconf.cvmfs.json
[2025-10-07 23:27:22] -rw------- 1 boincer umatlas   1560401 Oct  7 22:26 agis_ddmendpoints.agis.ALL.json
[2025-10-07 23:27:22] drwx------ 4 boincer umatlas      4096 Oct  7 22:26 pilot3
[2025-10-07 23:27:22] -rw-r--r-- 1 boincer umatlas      6134 Oct  7 23:21 init_data.xml
[2025-10-07 23:27:22] -rw------- 1 boincer umatlas 198537372 Oct  7 23:26 HITS.46376994._019538.pool.root.1
[2025-10-07 23:27:22] -rw-r--r-- 1 boincer umatlas       529 Oct  7 23:26 boinc_task_state.xml
[2025-10-07 23:27:22] -rw------- 1 boincer umatlas      1047 Oct  7 23:26 memory_monitor_summary.json
[2025-10-07 23:27:22] -rw------- 1 boincer umatlas    326620 Oct  7 23:26 log.46376994._019538.job.log.tgz.1
[2025-10-07 23:27:22] -rw------- 1 boincer umatlas        95 Oct  7 23:26 pilot_heartbeat.json
[2025-10-07 23:27:22] -rw------- 1 boincer umatlas      7840 Oct  7 23:26 heartbeat.json
[2025-10-07 23:27:22] -rw-r--r-- 1 boincer umatlas        27 Oct  7 23:26 wrapper_checkpoint.txt
[2025-10-07 23:27:22] -rw-r--r-- 1 boincer umatlas      8192 Oct  7 23:26 boinc_mmap_file
[2025-10-07 23:27:22] -rw------- 1 boincer umatlas      4746 Oct  7 23:27 pilotlog.txt
[2025-10-07 23:27:22] -rw------- 1 boincer umatlas    547584 Oct  7 23:27 log.46376994._019538.job.log.1
[2025-10-07 23:27:22] -rw------- 1 boincer umatlas       357 Oct  7 23:27 output.list
[2025-10-07 23:27:22] -rw-r--r-- 1 boincer umatlas       620 Oct  7 23:27 runtime_log
[2025-10-07 23:27:22] -rw------- 1 boincer umatlas    890880 Oct  7 23:27 result.tar.gz
[2025-10-07 23:27:22] -rw------- 1 boincer umatlas       656 Oct  7 23:27 JNmLDmfOSP8n9Rq4apOajLDm4fhM0noT9bVof3QYDmmvEMDmNpM6hn.diag
[2025-10-07 23:27:22] -rw-r--r-- 1 boincer umatlas      8703 Oct  7 23:27 runtime_log.err
[2025-10-07 23:27:22] -rw-r--r-- 1 boincer umatlas     22116 Oct  7 23:27 stderr.txt
[2025-10-07 23:27:22] HITS file was successfully produced:
[2025-10-07 23:27:22] -rw------- 1 boincer umatlas 198537372 Oct  7 23:26 shared/HITS.pool.root.1
[2025-10-07 23:27:22]  *** Contents of shared directory: ***
[2025-10-07 23:27:22] total 415680
[2025-10-07 23:27:22] -rw-r--r-- 2 boincer umatlas     15120 Oct  7 22:26 start_atlas.sh
[2025-10-07 23:27:22] -rw-r--r-- 2 boincer umatlas    565612 Oct  7 22:26 input.tar.gz
[2025-10-07 23:27:22] -rw-r--r-- 2 boincer umatlas 225627005 Oct  7 22:26 ATLAS.root_0
[2025-10-07 23:27:22] -rw------- 1 boincer umatlas 198537372 Oct  7 23:26 HITS.pool.root.1
[2025-10-07 23:27:22] -rw------- 1 boincer umatlas    890880 Oct  7 23:27 result.tar.gz
23:27:23 (5446): run_atlas exited; CPU time 26558.702517
23:27:23 (5446): called boinc_finish(0)

</stderr_txt>
]]>

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