Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:02:32 (31222): wrapper (7.7.26015): starting
22:02:32 (31222): wrapper: running run_atlas (--nthreads 12)
[2025-10-07 22:02:32] Arguments: --nthreads 12
[2025-10-07 22:02:32] Threads: 12
[2025-10-07 22:02:32] Checking for CVMFS
[2025-10-07 22:02:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 22:02:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 22:02:33] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 22:02:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 22:02:33] 2.11.2.0 2987 216450 97328 151453 0 1 18372493 20275201 1 130560 1 102851835 99.984 13169271 12082 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-07 22:02:33] CVMFS is ok
[2025-10-07 22:02:33] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-07 22:02:33] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-07 22:02:33] Further information can be found at the LHC@home message board.
[2025-10-07 22:02:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 22:02:33] Checking for apptainer binary...
[2025-10-07 22:02:33] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-07 22:02:33] Running /usr/bin/apptainer --version
[2025-10-07 22:02:33] apptainer version 1.3.2-1.el7
[2025-10-07 22:02:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 22:02:34] c-205-19.aglt2.org
[2025-10-07 22:02:34] apptainer works
[2025-10-07 22:02:34] Set ATHENA_PROC_NUMBER=12
[2025-10-07 22:02:34] Set ATHENA_CORE_NUMBER=12
[2025-10-07 22:02:34] Starting ATLAS job with PandaID=6830683651
[2025-10-07 22:02:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 23:23:09]  *** The last 200 lines of the pilot log: ***
[2025-10-07 23:23:09]  scope=mc23_13p6TeV
[2025-10-07 23:23:09]  status=None
[2025-10-07 23:23:09]  status_code=0
[2025-10-07 23:23:09]  storage_token=
[2025-10-07 23:23:09]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6830683651/log.46376994._019524.job.log.tgz.1
[2025-10-07 23:23:09]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/84/6e/log.46376994._019524.job.log.tgz.1
[2025-10-07 23:23:09]  workdir=None
[2025-10-07 23:23:09] ]
[2025-10-07 23:23:09] 2025-10-08 03:22:47,825 | INFO     | transferring file log.46376994._019524.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6830683651/log.46376994._019524.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-07 23:23:09] 2025-10-08 03:22:47,826 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6830683651/log.46376994._019524.job.log.tgz.1 /tmp/boinchome/slots/0/log.46376994._019524.job
[2025-10-07 23:23:09] 2025-10-08 03:22:47,849 | INFO     | adding to output.list: log.46376994._019524.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/84/6e/log.46376994._019524.job.log.tg
[2025-10-07 23:23:09] 2025-10-08 03:22:47,849 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-07 23:23:09] 2025-10-08 03:22:47,850 | INFO     | summary of transferred files:
[2025-10-07 23:23:09] 2025-10-08 03:22:47,850 | INFO     |  -- lfn=log.46376994._019524.job.log.tgz.1, status_code=0, status=transferred
[2025-10-07 23:23:09] 2025-10-08 03:22:47,850 | INFO     | stage-out finished correctly
[2025-10-07 23:23:09] 2025-10-08 03:22:47,934 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-07 23:23:09] 2025-10-08 03:22:48,133 | WARNING  | process 9992 can no longer be monitored (due to stat problems) - aborting
[2025-10-07 23:23:09] 2025-10-08 03:22:48,133 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6830683651/memory_monitor_summary.json (trf name=prmon)
[2025-10-07 23:23:09] 2025-10-08 03:22:48,220 | INFO     | number of running child processes to parent process 9992: 1
[2025-10-07 23:23:09] 2025-10-08 03:22:48,220 | INFO     | maximum number of monitored processes: 6
[2025-10-07 23:23:09] 2025-10-08 03:22:49,373 | INFO     | time since job start (4799s) is within the limit (172800.0s)
[2025-10-07 23:23:09] 2025-10-08 03:22:50,258 | INFO     | job 6830683651 has state=finished
[2025-10-07 23:23:09] 2025-10-08 03:22:50,258 | INFO     | preparing for final server update for job 6830683651 in state='finished'
[2025-10-07 23:23:09] 2025-10-08 03:22:50,259 | INFO     | this job has now completed (state=finished)
[2025-10-07 23:23:09] 2025-10-08 03:22:50,259 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-07 23:23:09] 2025-10-08 03:22:50,259 | INFO     | log transfer has been attempted: DONE
[2025-10-07 23:23:09] 2025-10-08 03:22:50,259 | INFO     | job 6830683651 has finished - writing final server update
[2025-10-07 23:23:09] 2025-10-08 03:22:50,260 | INFO     | total number of processed events: 400 (read)
[2025-10-07 23:23:09] 2025-10-08 03:22:50,260 | INFO     | executing command: lscpu
[2025-10-07 23:23:09] 2025-10-08 03:22:50,287 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-07 23:23:09] 2025-10-08 03:22:50,723 | INFO     | monitor loop #357: job 0:6830683651 is in state 'finished'
[2025-10-07 23:23:09] 2025-10-08 03:22:50,723 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 23:23:09] 2025-10-08 03:22:51,378 | INFO     | time since job start (4801s) is within the limit (172800.0s)
[2025-10-07 23:23:09] 2025-10-08 03:22:53,226 | INFO     | monitor loop #358: job 0:6830683651 is in state 'finished'
[2025-10-07 23:23:09] 2025-10-08 03:22:53,227 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 23:23:09] 2025-10-08 03:22:53,383 | INFO     | time since job start (4803s) is within the limit (172800.0s)
[2025-10-07 23:23:09] 2025-10-08 03:22:55,067 | INFO     | CPU arch script returned: x86-64-v2
[2025-10-07 23:23:09] 2025-10-08 03:22:55,071 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.9166666666667
[2025-10-07 23:23:09] 2025-10-08 03:22:55,074 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6830683651/memory_monitor_summary.json (trf name=prmon)
[2025-10-07 23:23:09] 2025-10-08 03:22:55,074 | INFO     | extracted standard info from prmon json
[2025-10-07 23:23:09] 2025-10-08 03:22:55,075 | INFO     | extracted standard memory fields from prmon json
[2025-10-07 23:23:09] 2025-10-08 03:22:55,075 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-07 23:23:09] 2025-10-08 03:22:55,075 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-07 23:23:09] 2025-10-08 03:22:55,075 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 23:23:09] 2025-10-08 03:22:55,077 | INFO     | fitting pss+swap vs Time
[2025-10-07 23:23:09] 2025-10-08 03:22:55,078 | INFO     | sum of square deviations: 115715658.0
[2025-10-07 23:23:09] 2025-10-08 03:22:55,078 | INFO     | sum of deviations: 212059912.0
[2025-10-07 23:23:09] 2025-10-08 03:22:55,078 | INFO     | mean x: 1759891469.5
[2025-10-07 23:23:09] 2025-10-08 03:22:55,078 | INFO     | mean y: 2686856.888888889
[2025-10-07 23:23:09] 2025-10-08 03:22:55,078 | INFO     | -- intersect: -3222481081.5047264
[2025-10-07 23:23:09] 2025-10-08 03:22:55,079 | INFO     | intersect: -3222481081.5047264
[2025-10-07 23:23:09] 2025-10-08 03:22:55,079 | INFO     | chi2: 0.0016085661571971618
[2025-10-07 23:23:09] 2025-10-08 03:22:55,079 | INFO     | -- intersect: -3222481081.5047264
[2025-10-07 23:23:09] 2025-10-08 03:22:55,079 | INFO     | current memory leak: 1.83 B/s (using 72 data points, chi2=0.00)
[2025-10-07 23:23:09] 2025-10-08 03:22:55,079 | INFO     | could have reported an average CPU frequency of 2028 MHz (6 samples)
[2025-10-07 23:23:09] 2025-10-08 03:22:55,079 | INFO     | ..............................
[2025-10-07 23:23:09] 2025-10-08 03:22:55,080 | INFO     | . Timing measurements:
[2025-10-07 23:23:09] 2025-10-08 03:22:55,080 | INFO     | . get job = 0 s
[2025-10-07 23:23:09] 2025-10-08 03:22:55,080 | INFO     | . initial setup = 2 s
[2025-10-07 23:23:09] 2025-10-08 03:22:55,080 | INFO     | . payload setup = 7 s
[2025-10-07 23:23:09] 2025-10-08 03:22:55,080 | INFO     | . stage-in = 0 s
[2025-10-07 23:23:09] 2025-10-08 03:22:55,080 | INFO     | . payload execution = 4769 s
[2025-10-07 23:23:09] 2025-10-08 03:22:55,080 | INFO     | . stage-out = 0 s
[2025-10-07 23:23:09] 2025-10-08 03:22:55,080 | INFO     | . log creation = 0 s
[2025-10-07 23:23:09] 2025-10-08 03:22:55,080 | INFO     | ..............................
[2025-10-07 23:23:09] 2025-10-08 03:22:55,386 | INFO     | 
[2025-10-07 23:23:09] 2025-10-08 03:22:55,387 | INFO     | job summary report
[2025-10-07 23:23:09] 2025-10-08 03:22:55,389 | INFO     | time since job start (4805s) is within the limit (172800.0s)
[2025-10-07 23:23:09] 2025-10-08 03:22:55,398 | INFO     | --------------------------------------------------
[2025-10-07 23:23:09] 2025-10-08 03:22:55,399 | INFO     | PanDA job id: 6830683651
[2025-10-07 23:23:09] 2025-10-08 03:22:55,399 | INFO     | task id: 46376994
[2025-10-07 23:23:09] 2025-10-08 03:22:55,399 | INFO     | errors: (none)
[2025-10-07 23:23:09] 2025-10-08 03:22:55,399 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 23:23:09] 2025-10-08 03:22:55,399 | INFO     | pilot state: finished 
[2025-10-07 23:23:09] 2025-10-08 03:22:55,399 | INFO     | transexitcode: 0
[2025-10-07 23:23:09] 2025-10-08 03:22:55,399 | INFO     | exeerrorcode: 0
[2025-10-07 23:23:09] 2025-10-08 03:22:55,400 | INFO     | exeerrordiag: 
[2025-10-07 23:23:09] 2025-10-08 03:22:55,400 | INFO     | exitcode: 0
[2025-10-07 23:23:09] 2025-10-08 03:22:55,400 | INFO     | exitmsg: OK
[2025-10-07 23:23:09] 2025-10-08 03:22:55,400 | INFO     | cpuconsumptiontime: 52383 s
[2025-10-07 23:23:09] 2025-10-08 03:22:55,400 | INFO     | nevents: 400
[2025-10-07 23:23:09] 2025-10-08 03:22:55,400 | INFO     | neventsw: 0
[2025-10-07 23:23:09] 2025-10-08 03:22:55,400 | INFO     | pid: 9992
[2025-10-07 23:23:09] 2025-10-08 03:22:55,400 | INFO     | pgrp: 9992
[2025-10-07 23:23:09] 2025-10-08 03:22:55,400 | INFO     | corecount: 12
[2025-10-07 23:23:09] 2025-10-08 03:22:55,400 | INFO     | event service: False
[2025-10-07 23:23:09] 2025-10-08 03:22:55,401 | INFO     | sizes: {0: 2348820, 1: 2348820, 5: 2349110, 11: 2349166, 4779: 2375363, 4781: 2384545, 4788: 2384683}
[2025-10-07 23:23:09] 2025-10-08 03:22:55,401 | INFO     | --------------------------------------------------
[2025-10-07 23:23:09] 2025-10-08 03:22:55,401 | INFO     | 
[2025-10-07 23:23:09] 2025-10-08 03:22:55,401 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-07 23:23:09] 2025-10-08 03:22:55,427 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 23:23:09] 2025-10-08 03:22:55,428 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 23:23:09] 2025-10-08 03:22:55,428 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 23:23:09] 2025-10-08 03:22:55,428 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 23:23:09] 2025-10-08 03:22:55,428 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 23:23:09] 2025-10-08 03:22:55,428 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 23:23:09] 2025-10-08 03:22:55,428 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 23:23:09] 2025-10-08 03:22:55,429 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 23:23:09] 2025-10-08 03:22:55,429 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 23:23:09] 2025-10-08 03:22:55,429 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 23:23:09] 2025-10-08 03:22:55,429 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 23:23:09] 2025-10-08 03:22:55,429 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 23:23:09] 2025-10-08 03:22:55,429 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 23:23:09] 2025-10-08 03:22:55,430 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 23:23:09] 2025-10-08 03:22:55,430 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 23:23:09] 2025-10-08 03:22:55,430 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 23:23:09] 2025-10-08 03:22:55,430 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 23:23:09] 2025-10-08 03:22:55,430 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 23:23:09] 2025-10-08 03:22:55,430 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 23:23:09] 2025-10-08 03:22:55,430 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 23:23:09] 2025-10-08 03:22:55,431 | INFO     | job 6830683651 has completed (purged errors)
[2025-10-07 23:23:09] 2025-10-08 03:22:55,431 | INFO     | overall cleanup function is called
[2025-10-07 23:23:09] 2025-10-08 03:22:56,439 | INFO     | --- collectZombieJob: --- 10, [9992]
[2025-10-07 23:23:09] 2025-10-08 03:22:56,439 | INFO     | zombie collector waiting for pid 9992
[2025-10-07 23:23:09] 2025-10-08 03:22:56,439 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 23:23:09] 2025-10-08 03:22:56,440 | INFO     | collected zombie processes
[2025-10-07 23:23:09] 2025-10-08 03:22:56,440 | INFO     | will attempt to kill all subprocesses of pid=9992
[2025-10-07 23:23:09] 2025-10-08 03:22:56,532 | INFO     | process IDs to be killed: [9992] (in reverse order)
[2025-10-07 23:23:09] 2025-10-08 03:22:56,584 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 23:23:09] 2025-10-08 03:22:56,585 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 23:23:09] 2025-10-08 03:22:56,588 | INFO     | did not find any defunct processes belonging to 9992
[2025-10-07 23:23:09] 2025-10-08 03:22:56,591 | INFO     | did not find any defunct processes belonging to 9992
[2025-10-07 23:23:09] 2025-10-08 03:22:56,591 | INFO     | ready for new job
[2025-10-07 23:23:09] 2025-10-08 03:22:56,591 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 23:23:09] 2025-10-08 03:22:56,593 | INFO     | ***************************************
[2025-10-07 23:23:09] 2025-10-08 03:22:56,593 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 23:23:09] 2025-10-08 03:22:56,593 | INFO     | ***************************************
[2025-10-07 23:23:09] 2025-10-08 03:22:56,593 | INFO     | 
[2025-10-07 23:23:09] 2025-10-08 03:22:56,594 | INFO     | architecture information:
[2025-10-07 23:23:09] 2025-10-08 03:22:56,594 | INFO     | executing command: cat /etc/os-release
[2025-10-07 23:23:09] 2025-10-08 03:22:56,610 | INFO     | cat /etc/os-release:
[2025-10-07 23:23:09] NAME="CentOS Linux"
[2025-10-07 23:23:09] VERSION="7 (Core)"
[2025-10-07 23:23:09] ID="centos"
[2025-10-07 23:23:09] ID_LIKE="rhel fedora"
[2025-10-07 23:23:09] VERSION_ID="7"
[2025-10-07 23:23:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 23:23:09] ANSI_COLOR="0;31"
[2025-10-07 23:23:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 23:23:09] HOME_URL="https://www.centos.org/"
[2025-10-07 23:23:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 23:23:09] 
[2025-10-07 23:23:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 23:23:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 23:23:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 23:23:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 23:23:09] 
[2025-10-07 23:23:09] 2025-10-08 03:22:56,610 | INFO     | ***************************************
[2025-10-07 23:23:09] 2025-10-08 03:22:57,113 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-07 23:23:09] 2025-10-08 03:22:57,129 | INFO     | sufficient remaining disk space (29345447936 B)
[2025-10-07 23:23:09] 2025-10-08 03:22:57,130 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 23:23:09] 2025-10-08 03:22:57,130 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 23:23:09] 2025-10-08 03:22:57,130 | INFO     | update_server=False
[2025-10-07 23:23:09] 2025-10-08 03:22:57,130 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 23:23:09] 2025-10-08 03:22:57,131 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 23:23:09] 2025-10-08 03:22:57,131 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 23:23:09] 2025-10-08 03:22:57,131 | INFO     | aborting loop
[2025-10-07 23:23:09] 2025-10-08 03:22:57,131 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-07 23:23:09] 2025-10-08 03:22:57,132 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 23:23:09] 2025-10-08 03:22:57,132 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 23:23:09] 2025-10-08 03:22:57,132 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 23:23:09] 2025-10-08 03:22:57,846 | INFO     | [monitor] cgroup control has ended
[2025-10-07 23:23:09] 2025-10-08 03:22:58,135 | INFO     | [job] retrieve thread has finished
[2025-10-07 23:23:09] 2025-10-08 03:22:58,136 | INFO     | [job] queue monitor thread has finished
[2025-10-07 23:23:09] 2025-10-08 03:22:58,137 | INFO     | [job] job monitor thread has finished
[2025-10-07 23:23:09] 2025-10-08 03:22:58,162 | INFO     | all data control threads have been joined
[2025-10-07 23:23:09] 2025-10-08 03:22:58,174 | INFO     | all payload control threads have been joined
[2025-10-07 23:23:09] 2025-10-08 03:22:58,370 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 23:23:09] 2025-10-08 03:22:58,373 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 23:23:09] 2025-10-08 03:22:58,406 | INFO     | [payload] validate_post thread has finished
[2025-10-07 23:23:09] 2025-10-08 03:22:58,419 | INFO     | all job control threads have been joined
[2025-10-07 23:23:09] 2025-10-08 03:22:58,449 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 23:23:09] 2025-10-08 03:22:58,520 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 23:23:09] 2025-10-08 03:22:58,918 | INFO     | [data] copytool_in thread has finished
[2025-10-07 23:23:09] 2025-10-08 03:22:59,064 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 23:23:09] 2025-10-08 03:22:59,131 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 23:23:09] 2025-10-08 03:22:59,168 | INFO     | [data] control thread has finished
[2025-10-07 23:23:09] 2025-10-08 03:22:59,179 | INFO     | [payload] control thread has finished
[2025-10-07 23:23:09] 2025-10-08 03:22:59,188 | INFO     | [payload] failed_post thread has finished
[2025-10-07 23:23:09] 2025-10-08 03:22:59,425 | INFO     | [job] control thread has finished
[2025-10-07 23:23:09] 2025-10-08 03:22:59,535 | INFO     | [job] validate thread has finished
[2025-10-07 23:23:09] 2025-10-08 03:23:00,454 | INFO     | [data] copytool_out thread has finished
[2025-10-07 23:23:09] 2025-10-08 03:23:02,525 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 23:23:09] 2025-10-08 03:23:03,955 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140627052554048)>', '<ExcThread(monitor, started 140626448328448)>']
[2025-10-07 23:23:09] 2025-10-08 03:23:04,168 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 23:23:09] 2025-10-08 03:23:04,168 | INFO     | [monitor] control thread has ended
[2025-10-07 23:23:09] 2025-10-08 03:23:08,980 | INFO     | all workflow threads have been joined
[2025-10-07 23:23:09] 2025-10-08 03:23:08,981 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 23:23:09] 2025-10-08 03:23:08,981 | INFO     | traces error code: 0
[2025-10-07 23:23:09] 2025-10-08 03:23:08,981 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 23:23:09] 2025-10-08 03:23:09,073 [wrapper] ==== pilot stdout END ====
[2025-10-07 23:23:09] 2025-10-08 03:23:09,077 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 23:23:09] 2025-10-08 03:23:09,081 [wrapper] pilotpid: 2679
[2025-10-07 23:23:09] 2025-10-08 03:23:09,084 [wrapper] Pilot exit status: 0
[2025-10-07 23:23:09] 2025-10-08 03:23:09,099 [wrapper] pandaids: 6830683651
[2025-10-07 23:23:09] 2025-10-08 03:23:09,140 [wrapper] cleanup supervisor_pilot 30293 2680
[2025-10-07 23:23:09] 2025-10-08 03:23:09,144 [wrapper] Test setup, not cleaning
[2025-10-07 23:23:09] 2025-10-08 03:23:09,148 [wrapper] apfmon messages muted
[2025-10-07 23:23:09] 2025-10-08 03:23:09,152 [wrapper] ==== wrapper stdout END ====
[2025-10-07 23:23:09] 2025-10-08 03:23:09,156 [wrapper] ==== wrapper stderr END ====
[2025-10-07 23:23:09]  *** Error codes and diagnostics ***
[2025-10-07 23:23:09]     "exeErrorCode": 0,
[2025-10-07 23:23:09]     "exeErrorDiag": "",
[2025-10-07 23:23:09]     "pilotErrorCode": 0,
[2025-10-07 23:23:09]     "pilotErrorDiag": "",
[2025-10-07 23:23:09]  *** Listing of results directory ***
[2025-10-07 23:23:09] total 428808
[2025-10-07 23:23:09] -rw-r--r-- 1 boincer umatlas    552446 Oct  4 21:02 pilot3.tar.gz
[2025-10-07 23:23:09] -rwx------ 1 boincer umatlas     36292 Oct  4 21:09 runpilot2-wrapper.sh
[2025-10-07 23:23:09] -rw-r--r-- 1 boincer umatlas      5112 Oct  4 21:09 queuedata.json
[2025-10-07 23:23:09] -rw-r--r-- 1 boincer umatlas       100 Oct  7 22:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 23:23:09] -rwxr-xr-x 1 boincer umatlas      7986 Oct  7 22:02 run_atlas
[2025-10-07 23:23:09] -rw-r--r-- 1 boincer umatlas       105 Oct  7 22:02 job.xml
[2025-10-07 23:23:09] -rw-r--r-- 2 boincer umatlas 226184216 Oct  7 22:02 EVNT.46376992._000439.pool.root.1
[2025-10-07 23:23:09] drwxrwx--x 2 boincer umatlas      4096 Oct  7 22:02 shared
[2025-10-07 23:23:09] -rw-r--r-- 2 boincer umatlas    565611 Oct  7 22:02 input.tar.gz
[2025-10-07 23:23:09] -rw-r--r-- 2 boincer umatlas     15120 Oct  7 22:02 start_atlas.sh
[2025-10-07 23:23:09] -rw-r--r-- 1 boincer umatlas         0 Oct  7 22:02 boinc_lockfile
[2025-10-07 23:23:09] -rw-r--r-- 1 boincer umatlas      2560 Oct  7 22:02 pandaJob.out
[2025-10-07 23:23:09] -rw------- 1 boincer umatlas    979833 Oct  7 22:02 agis_schedconf.cvmfs.json
[2025-10-07 23:23:09] -rw------- 1 boincer umatlas   1560401 Oct  7 22:02 agis_ddmendpoints.agis.ALL.json
[2025-10-07 23:23:09] drwx------ 4 boincer umatlas      4096 Oct  7 22:02 pilot3
[2025-10-07 23:23:09] -rw-r--r-- 1 boincer umatlas      5952 Oct  7 23:18 init_data.xml
[2025-10-07 23:23:09] -rw------- 1 boincer umatlas 206842555 Oct  7 23:22 HITS.46376994._019524.pool.root.1
[2025-10-07 23:23:09] -rw------- 1 boincer umatlas      1049 Oct  7 23:22 memory_monitor_summary.json
[2025-10-07 23:23:09] -rw-r--r-- 1 boincer umatlas      8192 Oct  7 23:22 boinc_mmap_file
[2025-10-07 23:23:09] -rw-r--r-- 1 boincer umatlas        27 Oct  7 23:22 wrapper_checkpoint.txt
[2025-10-07 23:23:09] -rw-r--r-- 1 boincer umatlas       529 Oct  7 23:22 boinc_task_state.xml
[2025-10-07 23:23:09] -rw------- 1 boincer umatlas    402244 Oct  7 23:22 log.46376994._019524.job.log.tgz.1
[2025-10-07 23:23:09] -rw------- 1 boincer umatlas        95 Oct  7 23:22 pilot_heartbeat.json
[2025-10-07 23:23:09] -rw------- 1 boincer umatlas      7850 Oct  7 23:22 heartbeat.json
[2025-10-07 23:23:09] -rw------- 1 boincer umatlas      4552 Oct  7 23:23 pilotlog.txt
[2025-10-07 23:23:09] -rw------- 1 boincer umatlas    688985 Oct  7 23:23 log.46376994._019524.job.log.1
[2025-10-07 23:23:09] -rw------- 1 boincer umatlas       357 Oct  7 23:23 output.list
[2025-10-07 23:23:09] -rw-r--r-- 1 boincer umatlas       620 Oct  7 23:23 runtime_log
[2025-10-07 23:23:09] -rw------- 1 boincer umatlas   1105920 Oct  7 23:23 result.tar.gz
[2025-10-07 23:23:09] -rw-r--r-- 1 boincer umatlas      8705 Oct  7 23:23 runtime_log.err
[2025-10-07 23:23:09] -rw------- 1 boincer umatlas       660 Oct  7 23:23 O9YKDmyQSP8n9Rq4apOajLDm4fhM0noT9bVof3QYDmWwEMDmAu6dBn.diag
[2025-10-07 23:23:09] -rw-r--r-- 1 boincer umatlas     21852 Oct  7 23:23 stderr.txt
[2025-10-07 23:23:09] HITS file was successfully produced:
[2025-10-07 23:23:09] -rw------- 1 boincer umatlas 206842555 Oct  7 23:22 shared/HITS.pool.root.1
[2025-10-07 23:23:09]  *** Contents of shared directory: ***
[2025-10-07 23:23:09] total 424540
[2025-10-07 23:23:09] -rw-r--r-- 2 boincer umatlas 226184216 Oct  7 22:02 ATLAS.root_0
[2025-10-07 23:23:09] -rw-r--r-- 2 boincer umatlas    565611 Oct  7 22:02 input.tar.gz
[2025-10-07 23:23:09] -rw-r--r-- 2 boincer umatlas     15120 Oct  7 22:02 start_atlas.sh
[2025-10-07 23:23:09] -rw------- 1 boincer umatlas 206842555 Oct  7 23:22 HITS.pool.root.1
[2025-10-07 23:23:09] -rw------- 1 boincer umatlas   1105920 Oct  7 23:23 result.tar.gz
23:23:11 (31222): run_atlas exited; CPU time 52353.715359
23:23:11 (31222): called boinc_finish(0)

</stderr_txt>
]]>

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