Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
20:19:42 (1270377): wrapper (7.7.26015): starting
20:19:42 (1270377): wrapper: running run_atlas (--nthreads 4)
[2025-10-07 20:19:42] Arguments: --nthreads 4
[2025-10-07 20:19:42] Threads: 4
[2025-10-07 20:19:42] Checking for CVMFS
[2025-10-07 20:19:42] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 20:19:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 20:19:42] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 20:19:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 20:19:43] 2.11.0.0 223286 9437 105900 151447 3 81 3501458 4096000 3021 130560 0 56180296 99.998 327071 1995 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-10-07 20:19:43] CVMFS is ok
[2025-10-07 20:19:43] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-07 20:19:43] Small home clusters do not require a local http proxy but it is suggested if
[2025-10-07 20:19:43] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-10-07 20:19:43] Further information can be found at the LHC@home message board.
[2025-10-07 20:19:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 20:19:43] Checking for apptainer binary...
[2025-10-07 20:19:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-07 20:19:43] Running /usr/bin/apptainer --version
[2025-10-07 20:19:43] apptainer version 1.4.2
[2025-10-07 20:19:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 20:19:43] x32-linux2
[2025-10-07 20:19:43] apptainer works
[2025-10-07 20:19:43] Set ATHENA_PROC_NUMBER=4
[2025-10-07 20:19:43] Set ATHENA_CORE_NUMBER=4
[2025-10-07 20:19:43] Starting ATLAS job with PandaID=6835298610
[2025-10-07 20:19:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/4 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 21:27:01]  *** The last 200 lines of the pilot log: ***
[2025-10-07 21:27:01]  status_code=0
[2025-10-07 21:27:01]  storage_token=
[2025-10-07 21:27:01]  surl=/var/lib/boinc-client/slots/4/PanDA_Pilot-6835298610/log.46376905._135463.job.log.tgz.1
[2025-10-07 21:27:01]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/12/33/log.46376905._135463.job.log.tgz.1
[2025-10-07 21:27:01]  workdir=None
[2025-10-07 21:27:01] ]
[2025-10-07 21:27:01] 2025-10-08 01:26:17,189 | INFO     | transferring file log.46376905._135463.job.log.tgz.1 from /var/lib/boinc-client/slots/4/PanDA_Pilot-6835298610/log.46376905._135463.job.log.tgz.1 to /var/lib/boinc
[2025-10-07 21:27:01] 2025-10-08 01:26:17,189 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/4/PanDA_Pilot-6835298610/log.46376905._135463.job.log.tgz.1 /var/lib/boinc-client/slots/4/log.463769
[2025-10-07 21:27:01] 2025-10-08 01:26:17,198 | INFO     | adding to output.list: log.46376905._135463.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/12/33/log.46376905._135463.job.log.tg
[2025-10-07 21:27:01] 2025-10-08 01:26:17,199 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-07 21:27:01] 2025-10-08 01:26:17,199 | INFO     | summary of transferred files:
[2025-10-07 21:27:01] 2025-10-08 01:26:17,199 | INFO     |  -- lfn=log.46376905._135463.job.log.tgz.1, status_code=0, status=transferred
[2025-10-07 21:27:01] 2025-10-08 01:26:17,199 | INFO     | stage-out finished correctly
[2025-10-07 21:27:01] 2025-10-08 01:26:17,226 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-07 21:27:01] 2025-10-08 01:26:17,273 | INFO     | job 6835298610 has state=finished
[2025-10-07 21:27:01] 2025-10-08 01:26:17,273 | INFO     | preparing for final server update for job 6835298610 in state='finished'
[2025-10-07 21:27:01] 2025-10-08 01:26:17,273 | INFO     | this job has now completed (state=finished)
[2025-10-07 21:27:01] 2025-10-08 01:26:17,273 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-07 21:27:01] 2025-10-08 01:26:17,273 | INFO     | log transfer has been attempted: DONE
[2025-10-07 21:27:01] 2025-10-08 01:26:17,273 | INFO     | job 6835298610 has finished - writing final server update
[2025-10-07 21:27:01] 2025-10-08 01:26:17,273 | INFO     | total number of processed events: 400 (read)
[2025-10-07 21:27:01] 2025-10-08 01:26:17,274 | INFO     | executing command: lscpu
[2025-10-07 21:27:01] 2025-10-08 01:26:17,289 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-07 21:27:01] 2025-10-08 01:26:17,380 | INFO     | time since job start (3988s) is within the limit (172800.0s)
[2025-10-07 21:27:01] 2025-10-08 01:26:19,382 | INFO     | time since job start (3990s) is within the limit (172800.0s)
[2025-10-07 21:27:01] 2025-10-08 01:26:19,585 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-07 21:27:01] 2025-10-08 01:26:19,587 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 3917.4795625
[2025-10-07 21:27:01] 2025-10-08 01:26:19,589 | INFO     | using path: /var/lib/boinc-client/slots/4/PanDA_Pilot-6835298610/memory_monitor_summary.json (trf name=prmon)
[2025-10-07 21:27:01] 2025-10-08 01:26:19,590 | INFO     | extracted standard info from prmon json
[2025-10-07 21:27:01] 2025-10-08 01:26:19,590 | INFO     | extracted standard memory fields from prmon json
[2025-10-07 21:27:01] 2025-10-08 01:26:19,590 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-07 21:27:01] 2025-10-08 01:26:19,590 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-07 21:27:01] 2025-10-08 01:26:19,590 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 21:27:01] 2025-10-08 01:26:19,591 | INFO     | fitting pss+swap vs Time
[2025-10-07 21:27:01] 2025-10-08 01:26:19,591 | INFO     | sum of square deviations: 60482994.5
[2025-10-07 21:27:01] 2025-10-08 01:26:19,591 | INFO     | sum of deviations: 238252915.50000003
[2025-10-07 21:27:01] 2025-10-08 01:26:19,591 | INFO     | mean x: 1759884852.5
[2025-10-07 21:27:01] 2025-10-08 01:26:19,591 | INFO     | mean y: 2308261.5344827585
[2025-10-07 21:27:01] 2025-10-08 01:26:19,591 | INFO     | -- intersect: -6930180787.968721
[2025-10-07 21:27:01] 2025-10-08 01:26:19,591 | INFO     | intersect: -6930180787.968721
[2025-10-07 21:27:01] 2025-10-08 01:26:19,591 | INFO     | chi2: 0.0031596845547178006
[2025-10-07 21:27:01] 2025-10-08 01:26:19,591 | INFO     | -- intersect: -6930180787.968721
[2025-10-07 21:27:01] 2025-10-08 01:26:19,591 | INFO     | current memory leak: 3.94 B/s (using 58 data points, chi2=0.00)
[2025-10-07 21:27:01] 2025-10-08 01:26:19,591 | INFO     | could have reported an average CPU frequency of 3939 MHz (6 samples)
[2025-10-07 21:27:01] 2025-10-08 01:26:19,591 | INFO     | ..............................
[2025-10-07 21:27:01] 2025-10-08 01:26:19,591 | INFO     | . Timing measurements:
[2025-10-07 21:27:01] 2025-10-08 01:26:19,591 | INFO     | . get job = 0 s
[2025-10-07 21:27:01] 2025-10-08 01:26:19,591 | INFO     | . initial setup = 2 s
[2025-10-07 21:27:01] 2025-10-08 01:26:19,591 | INFO     | . payload setup = 3 s
[2025-10-07 21:27:01] 2025-10-08 01:26:19,591 | INFO     | . stage-in = 0 s
[2025-10-07 21:27:01] 2025-10-08 01:26:19,591 | INFO     | . payload execution = 3966 s
[2025-10-07 21:27:01] 2025-10-08 01:26:19,591 | INFO     | . stage-out = 0 s
[2025-10-07 21:27:01] 2025-10-08 01:26:19,591 | INFO     | . log creation = 0 s
[2025-10-07 21:27:01] 2025-10-08 01:26:19,591 | INFO     | ..............................
[2025-10-07 21:27:01] 2025-10-08 01:26:19,972 | INFO     | 
[2025-10-07 21:27:01] 2025-10-08 01:26:19,972 | INFO     | job summary report
[2025-10-07 21:27:01] 2025-10-08 01:26:19,972 | INFO     | --------------------------------------------------
[2025-10-07 21:27:01] 2025-10-08 01:26:19,972 | INFO     | PanDA job id: 6835298610
[2025-10-07 21:27:01] 2025-10-08 01:26:19,972 | INFO     | task id: 46376905
[2025-10-07 21:27:01] 2025-10-08 01:26:19,972 | INFO     | errors: (none)
[2025-10-07 21:27:01] 2025-10-08 01:26:19,972 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 21:27:01] 2025-10-08 01:26:19,972 | INFO     | pilot state: finished 
[2025-10-07 21:27:01] 2025-10-08 01:26:19,972 | INFO     | transexitcode: 0
[2025-10-07 21:27:01] 2025-10-08 01:26:19,972 | INFO     | exeerrorcode: 0
[2025-10-07 21:27:01] 2025-10-08 01:26:19,972 | INFO     | exeerrordiag: 
[2025-10-07 21:27:01] 2025-10-08 01:26:19,972 | INFO     | exitcode: 0
[2025-10-07 21:27:01] 2025-10-08 01:26:19,972 | INFO     | exitmsg: OK
[2025-10-07 21:27:01] 2025-10-08 01:26:19,972 | INFO     | cpuconsumptiontime: 15437 s
[2025-10-07 21:27:01] 2025-10-08 01:26:19,972 | INFO     | nevents: 400
[2025-10-07 21:27:01] 2025-10-08 01:26:19,972 | INFO     | neventsw: 0
[2025-10-07 21:27:01] 2025-10-08 01:26:19,972 | INFO     | pid: 1300053
[2025-10-07 21:27:01] 2025-10-08 01:26:19,972 | INFO     | pgrp: 1300053
[2025-10-07 21:27:01] 2025-10-08 01:26:19,972 | INFO     | corecount: 4
[2025-10-07 21:27:01] 2025-10-08 01:26:19,972 | INFO     | event service: False
[2025-10-07 21:27:01] 2025-10-08 01:26:19,972 | INFO     | sizes: {0: 2348777, 3: 2349039, 11: 2349067, 3973: 2375010, 3975: 2384078, 3977: 2384216}
[2025-10-07 21:27:01] 2025-10-08 01:26:19,972 | INFO     | --------------------------------------------------
[2025-10-07 21:27:01] 2025-10-08 01:26:19,972 | INFO     | 
[2025-10-07 21:27:01] 2025-10-08 01:26:19,973 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/4
[2025-10-07 21:27:01] 2025-10-08 01:26:19,982 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 21:27:01] 2025-10-08 01:26:19,982 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 21:27:01] 2025-10-08 01:26:19,982 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 21:27:01] 2025-10-08 01:26:19,982 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 21:27:01] 2025-10-08 01:26:19,982 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 21:27:01] 2025-10-08 01:26:19,982 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 21:27:01] 2025-10-08 01:26:19,983 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 21:27:01] 2025-10-08 01:26:19,983 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 21:27:01] 2025-10-08 01:26:19,983 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 21:27:01] 2025-10-08 01:26:19,983 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 21:27:01] 2025-10-08 01:26:19,983 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 21:27:01] 2025-10-08 01:26:19,983 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 21:27:01] 2025-10-08 01:26:19,983 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 21:27:01] 2025-10-08 01:26:19,983 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 21:27:01] 2025-10-08 01:26:19,983 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 21:27:01] 2025-10-08 01:26:19,983 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 21:27:01] 2025-10-08 01:26:19,983 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 21:27:01] 2025-10-08 01:26:19,983 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 21:27:01] 2025-10-08 01:26:19,983 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 21:27:01] 2025-10-08 01:26:19,983 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 21:27:01] 2025-10-08 01:26:19,983 | INFO     | job 6835298610 has completed (purged errors)
[2025-10-07 21:27:01] 2025-10-08 01:26:19,983 | INFO     | overall cleanup function is called
[2025-10-07 21:27:01] 2025-10-08 01:26:20,990 | INFO     | --- collectZombieJob: --- 10, [1300053]
[2025-10-07 21:27:01] 2025-10-08 01:26:20,990 | INFO     | zombie collector waiting for pid 1300053
[2025-10-07 21:27:01] 2025-10-08 01:26:20,990 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 21:27:01] 2025-10-08 01:26:20,990 | INFO     | collected zombie processes
[2025-10-07 21:27:01] 2025-10-08 01:26:20,990 | INFO     | will attempt to kill all subprocesses of pid=1300053
[2025-10-07 21:27:01] 2025-10-08 01:26:21,054 | INFO     | process IDs to be killed: [1300053] (in reverse order)
[2025-10-07 21:27:01] 2025-10-08 01:26:21,080 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 21:27:01] 2025-10-08 01:26:21,080 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 21:27:01] 2025-10-08 01:26:21,082 | INFO     | did not find any defunct processes belonging to 1300053
[2025-10-07 21:27:01] 2025-10-08 01:26:21,083 | INFO     | did not find any defunct processes belonging to 1300053
[2025-10-07 21:27:01] 2025-10-08 01:26:21,083 | INFO     | ready for new job
[2025-10-07 21:27:01] 2025-10-08 01:26:21,083 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 21:27:01] 2025-10-08 01:26:21,084 | INFO     | ***************************************
[2025-10-07 21:27:01] 2025-10-08 01:26:21,084 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 21:27:01] 2025-10-08 01:26:21,084 | INFO     | ***************************************
[2025-10-07 21:27:01] 2025-10-08 01:26:21,084 | INFO     | 
[2025-10-07 21:27:01] 2025-10-08 01:26:21,085 | INFO     | architecture information:
[2025-10-07 21:27:01] 2025-10-08 01:26:21,085 | INFO     | executing command: cat /etc/os-release
[2025-10-07 21:27:01] 2025-10-08 01:26:21,091 | INFO     | cat /etc/os-release:
[2025-10-07 21:27:01] NAME="CentOS Linux"
[2025-10-07 21:27:01] VERSION="7 (Core)"
[2025-10-07 21:27:01] ID="centos"
[2025-10-07 21:27:01] ID_LIKE="rhel fedora"
[2025-10-07 21:27:01] VERSION_ID="7"
[2025-10-07 21:27:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 21:27:01] ANSI_COLOR="0;31"
[2025-10-07 21:27:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 21:27:01] HOME_URL="https://www.centos.org/"
[2025-10-07 21:27:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 21:27:01] 
[2025-10-07 21:27:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 21:27:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 21:27:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 21:27:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 21:27:01] 
[2025-10-07 21:27:01] 2025-10-08 01:26:21,091 | INFO     | ***************************************
[2025-10-07 21:27:01] 2025-10-08 01:26:21,594 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/4
[2025-10-07 21:27:01] 2025-10-08 01:26:21,602 | INFO     | sufficient remaining disk space (418077736960 B)
[2025-10-07 21:27:01] 2025-10-08 01:26:21,602 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 21:27:01] 2025-10-08 01:26:21,602 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 21:27:01] 2025-10-08 01:26:21,602 | INFO     | update_server=False
[2025-10-07 21:27:01] 2025-10-08 01:26:21,602 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 21:27:01] 2025-10-08 01:26:21,602 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 21:27:01] 2025-10-08 01:26:22,092 | INFO     | all job control threads have been joined
[2025-10-07 21:27:01] 2025-10-08 01:26:22,530 | WARNING  | process 1300053 can no longer be monitored (due to stat problems) - aborting
[2025-10-07 21:27:01] 2025-10-08 01:26:22,574 | INFO     | using path: /var/lib/boinc-client/slots/4/memory_monitor_summary.json (trf name=prmon)
[2025-10-07 21:27:01] 2025-10-08 01:26:22,574 | INFO     | using path: /var/lib/boinc-client/slots/4/memory_monitor_summary.json (trf name=prmon)
[2025-10-07 21:27:01] 2025-10-08 01:26:22,574 | INFO     | skipping file size check of payload stdout file (/var/lib/boinc-client/slots/4/PanDA_Pilot-6835298610/payload.stdout) since it has not been created yet
[2025-10-07 21:27:01] 2025-10-08 01:26:22,575 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/4
[2025-10-07 21:27:01] 2025-10-08 01:26:22,582 | INFO     | sufficient remaining disk space (418076688384 B)
[2025-10-07 21:27:01] 2025-10-08 01:26:22,582 | WARNING  | skipping size check of workdir since it has not been created yet
[2025-10-07 21:27:01] 2025-10-08 01:26:22,582 | INFO     | output file size check: skipping output file /var/lib/boinc-client/slots/4/PanDA_Pilot-6835298610/HITS.46376905._135463.pool.root.1 since it does not exist
[2025-10-07 21:27:01] 2025-10-08 01:26:22,603 | INFO     | [job] retrieve thread has finished
[2025-10-07 21:27:01] 2025-10-08 01:26:22,608 | INFO     | [job] queue monitor thread has finished
[2025-10-07 21:27:01] 2025-10-08 01:26:22,639 | INFO     | all data control threads have been joined
[2025-10-07 21:27:01] 2025-10-08 01:26:22,641 | INFO     | number of running child processes to parent process 1300053: 1
[2025-10-07 21:27:01] 2025-10-08 01:26:22,641 | INFO     | maximum number of monitored processes: 6
[2025-10-07 21:27:01] 2025-10-08 01:26:22,641 | INFO     | aborting job monitoring since job object (job id=6835298610) has expired
[2025-10-07 21:27:01] 2025-10-08 01:26:22,641 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 21:27:01] 2025-10-08 01:26:22,641 | INFO     | will abort loop
[2025-10-07 21:27:01] 2025-10-08 01:26:22,732 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 21:27:01] 2025-10-08 01:26:22,734 | INFO     | [payload] failed_post thread has finished
[2025-10-07 21:27:01] 2025-10-08 01:26:22,737 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 21:27:01] 2025-10-08 01:26:22,762 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 21:27:01] 2025-10-08 01:26:22,771 | INFO     | all payload control threads have been joined
[2025-10-07 21:27:01] 2025-10-08 01:26:22,984 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 21:27:01] 2025-10-08 01:26:23,097 | INFO     | [job] control thread has finished
[2025-10-07 21:27:01] 2025-10-08 01:26:23,234 | INFO     | [payload] validate_post thread has finished
[2025-10-07 21:27:01] 2025-10-08 01:26:23,277 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 21:27:01] 2025-10-08 01:26:23,644 | INFO     | [data] control thread has finished
[2025-10-07 21:27:01] 2025-10-08 01:26:23,646 | INFO     | [job] job monitor thread has finished
[2025-10-07 21:27:01] 2025-10-08 01:26:23,776 | INFO     | [payload] control thread has finished
[2025-10-07 21:27:01] 2025-10-08 01:26:23,821 | INFO     | [data] copytool_in thread has finished
[2025-10-07 21:27:01] 2025-10-08 01:26:24,026 | INFO     | [job] validate thread has finished
[2025-10-07 21:27:01] 2025-10-08 01:26:24,091 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 21:27:01] 2025-10-08 01:26:24,737 | INFO     | [data] copytool_out thread has finished
[2025-10-07 21:27:01] 2025-10-08 01:26:27,282 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 21:27:01] 2025-10-08 01:26:52,527 | INFO     | PID=1275675 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-07 21:27:01] 2025-10-08 01:26:52,527 | INFO     | .. there are 2 such processes running
[2025-10-07 21:27:01] 2025-10-08 01:26:52,528 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 21:27:01] 2025-10-08 01:26:52,528 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 21:27:01] 2025-10-08 01:26:52,528 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 21:27:01] 2025-10-08 01:26:55,218 | INFO     | [monitor] cgroup control has ended
[2025-10-07 21:27:01] 2025-10-08 01:26:56,198 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 136724059293504)>', '<ExcThread(monitor, started 136723279365888)>']
[2025-10-07 21:27:01] 2025-10-08 01:26:56,545 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 21:27:01] 2025-10-08 01:26:56,545 | INFO     | [monitor] control thread has ended
[2025-10-07 21:27:01] 2025-10-08 01:27:01,223 | INFO     | all workflow threads have been joined
[2025-10-07 21:27:01] 2025-10-08 01:27:01,223 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 21:27:01] 2025-10-08 01:27:01,224 | INFO     | traces error code: 0
[2025-10-07 21:27:01] 2025-10-08 01:27:01,224 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 21:27:01] 2025-10-08 01:27:01,265 [wrapper] ==== pilot stdout END ====
[2025-10-07 21:27:01] 2025-10-08 01:27:01,267 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 21:27:01] 2025-10-08 01:27:01,268 [wrapper] pilotpid: 1275675
[2025-10-07 21:27:01] 2025-10-08 01:27:01,269 [wrapper] Pilot exit status: 0
[2025-10-07 21:27:01] 2025-10-08 01:27:01,274 [wrapper] pandaids: 6835298610
[2025-10-07 21:27:01] 2025-10-08 01:27:01,290 [wrapper] cleanup supervisor_pilot 1338124 1275677
[2025-10-07 21:27:01] 2025-10-08 01:27:01,291 [wrapper] Test setup, not cleaning
[2025-10-07 21:27:01] 2025-10-08 01:27:01,292 [wrapper] apfmon messages muted
[2025-10-07 21:27:01] 2025-10-08 01:27:01,294 [wrapper] ==== wrapper stdout END ====
[2025-10-07 21:27:01] 2025-10-08 01:27:01,295 [wrapper] ==== wrapper stderr END ====
[2025-10-07 21:27:01]  *** Error codes and diagnostics ***
[2025-10-07 21:27:01]     "exeErrorCode": 0,
[2025-10-07 21:27:01]     "exeErrorDiag": "",
[2025-10-07 21:27:01]     "pilotErrorCode": 0,
[2025-10-07 21:27:01]     "pilotErrorDiag": "",
[2025-10-07 21:27:01]  *** Listing of results directory ***
[2025-10-07 21:27:01] total 394920
[2025-10-07 21:27:01] -rwx------ 1 boinc boinc     36292 Oct  7 17:15 runpilot2-wrapper.sh
[2025-10-07 21:27:01] -rw-r--r-- 1 boinc boinc      5112 Oct  7 17:15 queuedata.json
[2025-10-07 21:27:01] -rw-r--r-- 1 boinc boinc    552446 Oct  7 17:15 pilot3.tar.gz
[2025-10-07 21:27:01] -rw-r--r-- 1 boinc boinc       100 Oct  7 20:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 21:27:01] -rwxr-xr-x 1 boinc boinc      7986 Oct  7 20:19 run_atlas
[2025-10-07 21:27:01] -rw-r--r-- 1 boinc boinc       105 Oct  7 20:19 job.xml
[2025-10-07 21:27:01] -rw-r--r-- 2 boinc boinc     15120 Oct  7 20:19 start_atlas.sh
[2025-10-07 21:27:01] drwxrwx--x 2 boinc boinc      4096 Oct  7 20:19 shared
[2025-10-07 21:27:01] -rw-r--r-- 2 boinc boinc    565603 Oct  7 20:19 input.tar.gz
[2025-10-07 21:27:01] -rw-r--r-- 1 boinc boinc      9449 Oct  7 20:19 init_data.xml
[2025-10-07 21:27:01] -rw-r--r-- 2 boinc boinc 218322373 Oct  7 20:19 EVNT.46376901._004591.pool.root.1
[2025-10-07 21:27:01] -rw-r--r-- 1 boinc boinc         0 Oct  7 20:19 boinc_lockfile
[2025-10-07 21:27:01] -rw-r--r-- 1 boinc boinc      2521 Oct  7 20:19 pandaJob.out
[2025-10-07 21:27:01] -rw------- 1 boinc boinc    979856 Oct  7 20:19 agis_schedconf.cvmfs.json
[2025-10-07 21:27:01] -rw------- 1 boinc boinc   1560401 Oct  7 20:19 agis_ddmendpoints.agis.ALL.json
[2025-10-07 21:27:01] drwx------ 4 boinc boinc      4096 Oct  7 20:19 pilot3
[2025-10-07 21:27:01] -rw------- 1 boinc boinc 180470161 Oct  7 21:25 HITS.46376905._135463.pool.root.1
[2025-10-07 21:27:01] -rw-r--r-- 1 boinc boinc       530 Oct  7 21:26 boinc_task_state.xml
[2025-10-07 21:27:01] -rw------- 1 boinc boinc      1017 Oct  7 21:26 memory_monitor_summary.json
[2025-10-07 21:27:01] -rw------- 1 boinc boinc    249425 Oct  7 21:26 log.46376905._135463.job.log.tgz.1
[2025-10-07 21:27:01] -rw------- 1 boinc boinc      7732 Oct  7 21:26 heartbeat.json
[2025-10-07 21:27:01] -rw------- 1 boinc boinc        95 Oct  7 21:26 pilot_heartbeat.json
[2025-10-07 21:27:01] -rw-r--r-- 1 boinc boinc      8192 Oct  7 21:26 boinc_mmap_file
[2025-10-07 21:27:01] -rw-r--r-- 1 boinc boinc        27 Oct  7 21:26 wrapper_checkpoint.txt
[2025-10-07 21:27:01] -rw------- 1 boinc boinc      6146 Oct  7 21:27 pilotlog.txt
[2025-10-07 21:27:01] -rw------- 1 boinc boinc    605239 Oct  7 21:27 log.46376905._135463.job.log.1
[2025-10-07 21:27:01] -rw------- 1 boinc boinc       357 Oct  7 21:27 output.list
[2025-10-07 21:27:01] -rw-r--r-- 1 boinc boinc       620 Oct  7 21:27 runtime_log
[2025-10-07 21:27:01] -rw------- 1 boinc boinc    870400 Oct  7 21:27 result.tar.gz
[2025-10-07 21:27:01] -rw------- 1 boinc boinc       641 Oct  7 21:27 zLbNDmvCUQ8n9Rq4apOajLDm4fhM0noT9bVof3QYDmamLMDmAQ3Lpn.diag
[2025-10-07 21:27:01] -rw-r--r-- 1 boinc boinc      8764 Oct  7 21:27 runtime_log.err
[2025-10-07 21:27:01] -rw-r--r-- 1 boinc boinc     22346 Oct  7 21:27 stderr.txt
[2025-10-07 21:27:01] HITS file was successfully produced:
[2025-10-07 21:27:01] -rw------- 1 boinc boinc 180470161 Oct  7 21:25 shared/HITS.pool.root.1
[2025-10-07 21:27:01]  *** Contents of shared directory: ***
[2025-10-07 21:27:01] total 390884
[2025-10-07 21:27:01] -rw-r--r-- 2 boinc boinc     15120 Oct  7 20:19 start_atlas.sh
[2025-10-07 21:27:01] -rw-r--r-- 2 boinc boinc    565603 Oct  7 20:19 input.tar.gz
[2025-10-07 21:27:01] -rw-r--r-- 2 boinc boinc 218322373 Oct  7 20:19 ATLAS.root_0
[2025-10-07 21:27:01] -rw------- 1 boinc boinc 180470161 Oct  7 21:25 HITS.pool.root.1
[2025-10-07 21:27:01] -rw------- 1 boinc boinc    870400 Oct  7 21:27 result.tar.gz
21:27:02 (1270377): run_atlas exited; CPU time 15483.983184
21:27:02 (1270377): called boinc_finish(0)

</stderr_txt>
]]>

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