Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
17:32:09 (2330624): wrapper (7.7.26015): starting
17:32:09 (2330624): wrapper: running run_atlas (--nthreads 12)
[2025-10-07 17:32:09] Arguments: --nthreads 12
[2025-10-07 17:32:09] Threads: 12
[2025-10-07 17:32:09] Checking for CVMFS
[2025-10-07 17:32:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 17:32:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 17:32:09] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 17:32:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 17:32:09] 2.13.2.0 193085 6940 54096 151450 3 188 16477115 16777217 916 130560 0 26275175 99.998 230576 1208 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://127.0.0.1:3128 1
[2025-10-07 17:32:09] CVMFS is ok
[2025-10-07 17:32:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 17:32:09] Checking for apptainer binary...
[2025-10-07 17:32:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-07 17:32:09] Running /usr/bin/apptainer --version
[2025-10-07 17:32:09] apptainer version 1.3.0-bp160.1.36
[2025-10-07 17:32:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 17:32:09] boinc-runner
[2025-10-07 17:32:09] apptainer works
[2025-10-07 17:32:09] Set ATHENA_PROC_NUMBER=12
[2025-10-07 17:32:09] Set ATHENA_CORE_NUMBER=12
[2025-10-07 17:32:09] Starting ATLAS job with PandaID=6835263761
[2025-10-07 17:32:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 17:58:35]  *** The last 200 lines of the pilot log: ***
[2025-10-07 17:58:35]  protocols=[{'endpoint': 'davs://dav.ndgf.org:443', 'flavour': 'WEBDAV', 'id': 331, 'path': '/atlas/disk/atlasdatadisk/rucio/'}]
[2025-10-07 17:58:35]  replicas=None
[2025-10-07 17:58:35]  scope=mc23_13p6TeV
[2025-10-07 17:58:35]  status=None
[2025-10-07 17:58:35]  status_code=0
[2025-10-07 17:58:35]  storage_token=
[2025-10-07 17:58:35]  surl=/var/lib/boinc/slots/6/PanDA_Pilot-6835263761/log.46376905._135409.job.log.tgz.1
[2025-10-07 17:58:35]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e8/39/log.46376905._135409.job.log.tgz.1
[2025-10-07 17:58:35]  workdir=None
[2025-10-07 17:58:35] ]
[2025-10-07 17:58:35] 2025-10-07 22:57:58,432 | INFO     | transferring file log.46376905._135409.job.log.tgz.1 from /var/lib/boinc/slots/6/PanDA_Pilot-6835263761/log.46376905._135409.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-07 17:58:35] 2025-10-07 22:57:58,432 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/6/PanDA_Pilot-6835263761/log.46376905._135409.job.log.tgz.1 /var/lib/boinc/slots/6/log.46376905._135409.job
[2025-10-07 17:58:35] 2025-10-07 22:57:58,440 | INFO     | adding to output.list: log.46376905._135409.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/e8/39/log.46376905._135409.job.log.tg
[2025-10-07 17:58:35] 2025-10-07 22:57:58,441 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-07 17:58:35] 2025-10-07 22:57:58,441 | INFO     | summary of transferred files:
[2025-10-07 17:58:35] 2025-10-07 22:57:58,441 | INFO     |  -- lfn=log.46376905._135409.job.log.tgz.1, status_code=0, status=transferred
[2025-10-07 17:58:35] 2025-10-07 22:57:58,441 | INFO     | stage-out finished correctly
[2025-10-07 17:58:35] 2025-10-07 22:57:58,474 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-07 17:58:35] 2025-10-07 22:58:00,006 | INFO     | job 6835263761 has state=finished
[2025-10-07 17:58:35] 2025-10-07 22:58:00,006 | INFO     | preparing for final server update for job 6835263761 in state='finished'
[2025-10-07 17:58:35] 2025-10-07 22:58:00,006 | INFO     | this job has now completed (state=finished)
[2025-10-07 17:58:35] 2025-10-07 22:58:00,006 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-07 17:58:35] 2025-10-07 22:58:00,006 | INFO     | log transfer has been attempted: DONE
[2025-10-07 17:58:35] 2025-10-07 22:58:00,006 | INFO     | job 6835263761 has finished - writing final server update
[2025-10-07 17:58:35] 2025-10-07 22:58:00,006 | INFO     | total number of processed events: 400 (read)
[2025-10-07 17:58:35] 2025-10-07 22:58:00,007 | INFO     | executing command: lscpu
[2025-10-07 17:58:35] 2025-10-07 22:58:00,022 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-07 17:58:35] 2025-10-07 22:58:00,401 | INFO     | time since job start (1545s) is within the limit (172800.0s)
[2025-10-07 17:58:35] 2025-10-07 22:58:00,830 | INFO     | monitor loop #121: job 0:6835263761 is in state 'finished'
[2025-10-07 17:58:35] 2025-10-07 22:58:00,831 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 17:58:35] 2025-10-07 22:58:02,407 | INFO     | time since job start (1547s) is within the limit (172800.0s)
[2025-10-07 17:58:35] 2025-10-07 22:58:03,333 | INFO     | monitor loop #122: job 0:6835263761 is in state 'finished'
[2025-10-07 17:58:35] 2025-10-07 22:58:03,334 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 17:58:35] 2025-10-07 22:58:03,865 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-07 17:58:35] 2025-10-07 22:58:03,867 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4226.6930625
[2025-10-07 17:58:35] 2025-10-07 22:58:03,869 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6835263761/memory_monitor_summary.json (trf name=prmon)
[2025-10-07 17:58:35] 2025-10-07 22:58:03,869 | INFO     | extracted standard info from prmon json
[2025-10-07 17:58:35] 2025-10-07 22:58:03,869 | INFO     | extracted standard memory fields from prmon json
[2025-10-07 17:58:35] 2025-10-07 22:58:03,869 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-07 17:58:35] 2025-10-07 22:58:03,869 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-07 17:58:35] 2025-10-07 22:58:03,869 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 17:58:35] 2025-10-07 22:58:03,869 | INFO     | fitting pss+swap vs Time
[2025-10-07 17:58:35] 2025-10-07 22:58:03,869 | INFO     | sum of square deviations: 1802824.5
[2025-10-07 17:58:35] 2025-10-07 22:58:03,870 | INFO     | sum of deviations: 435777442.50000006
[2025-10-07 17:58:35] 2025-10-07 22:58:03,870 | INFO     | mean x: 1759877176.5
[2025-10-07 17:58:35] 2025-10-07 22:58:03,870 | INFO     | mean y: 3112779.1666666665
[2025-10-07 17:58:35] 2025-10-07 22:58:03,870 | INFO     | -- intersect: -425393133549.4644
[2025-10-07 17:58:35] 2025-10-07 22:58:03,870 | INFO     | intersect: -425393133549.4644
[2025-10-07 17:58:35] 2025-10-07 22:58:03,870 | INFO     | chi2: 0.0026178630818813743
[2025-10-07 17:58:35] 2025-10-07 22:58:03,870 | INFO     | -- intersect: -425393133549.4644
[2025-10-07 17:58:35] 2025-10-07 22:58:03,870 | INFO     | current memory leak: 241.72 B/s (using 18 data points, chi2=0.00)
[2025-10-07 17:58:35] 2025-10-07 22:58:03,870 | INFO     | could have reported an average CPU frequency of 4173 MHz (4 samples)
[2025-10-07 17:58:35] 2025-10-07 22:58:03,870 | INFO     | ..............................
[2025-10-07 17:58:35] 2025-10-07 22:58:03,870 | INFO     | . Timing measurements:
[2025-10-07 17:58:35] 2025-10-07 22:58:03,870 | INFO     | . get job = 0 s
[2025-10-07 17:58:35] 2025-10-07 22:58:03,870 | INFO     | . initial setup = 2 s
[2025-10-07 17:58:35] 2025-10-07 22:58:03,870 | INFO     | . payload setup = 2 s
[2025-10-07 17:58:35] 2025-10-07 22:58:03,870 | INFO     | . stage-in = 0 s
[2025-10-07 17:58:35] 2025-10-07 22:58:03,870 | INFO     | . payload execution = 1522 s
[2025-10-07 17:58:35] 2025-10-07 22:58:03,870 | INFO     | . stage-out = 0 s
[2025-10-07 17:58:35] 2025-10-07 22:58:03,870 | INFO     | . log creation = 0 s
[2025-10-07 17:58:35] 2025-10-07 22:58:03,870 | INFO     | ..............................
[2025-10-07 17:58:35] 2025-10-07 22:58:03,905 | INFO     | 
[2025-10-07 17:58:35] 2025-10-07 22:58:03,905 | INFO     | job summary report
[2025-10-07 17:58:35] 2025-10-07 22:58:03,905 | INFO     | --------------------------------------------------
[2025-10-07 17:58:35] 2025-10-07 22:58:03,905 | INFO     | PanDA job id: 6835263761
[2025-10-07 17:58:35] 2025-10-07 22:58:03,905 | INFO     | task id: 46376905
[2025-10-07 17:58:35] 2025-10-07 22:58:03,905 | INFO     | errors: (none)
[2025-10-07 17:58:35] 2025-10-07 22:58:03,905 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 17:58:35] 2025-10-07 22:58:03,905 | INFO     | pilot state: finished 
[2025-10-07 17:58:35] 2025-10-07 22:58:03,905 | INFO     | transexitcode: 0
[2025-10-07 17:58:35] 2025-10-07 22:58:03,905 | INFO     | exeerrorcode: 0
[2025-10-07 17:58:35] 2025-10-07 22:58:03,905 | INFO     | exeerrordiag: 
[2025-10-07 17:58:35] 2025-10-07 22:58:03,905 | INFO     | exitcode: 0
[2025-10-07 17:58:35] 2025-10-07 22:58:03,905 | INFO     | exitmsg: OK
[2025-10-07 17:58:35] 2025-10-07 22:58:03,905 | INFO     | cpuconsumptiontime: 16502 s
[2025-10-07 17:58:35] 2025-10-07 22:58:03,905 | INFO     | nevents: 400
[2025-10-07 17:58:35] 2025-10-07 22:58:03,905 | INFO     | neventsw: 0
[2025-10-07 17:58:35] 2025-10-07 22:58:03,905 | INFO     | pid: 2341355
[2025-10-07 17:58:35] 2025-10-07 22:58:03,905 | INFO     | pgrp: 2341355
[2025-10-07 17:58:35] 2025-10-07 22:58:03,905 | INFO     | corecount: 12
[2025-10-07 17:58:35] 2025-10-07 22:58:03,905 | INFO     | event service: False
[2025-10-07 17:58:35] 2025-10-07 22:58:03,905 | INFO     | sizes: {0: 2348816, 2: 2349078, 10: 2349106, 1528: 2373972, 1530: 2383026, 1536: 2383164}
[2025-10-07 17:58:35] 2025-10-07 22:58:03,905 | INFO     | --------------------------------------------------
[2025-10-07 17:58:35] 2025-10-07 22:58:03,905 | INFO     | 
[2025-10-07 17:58:35] 2025-10-07 22:58:03,905 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-10-07 17:58:35] 2025-10-07 22:58:03,915 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 17:58:35] 2025-10-07 22:58:03,915 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 17:58:35] 2025-10-07 22:58:03,915 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 17:58:35] 2025-10-07 22:58:03,915 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 17:58:35] 2025-10-07 22:58:03,915 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 17:58:35] 2025-10-07 22:58:03,915 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 17:58:35] 2025-10-07 22:58:03,915 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 17:58:35] 2025-10-07 22:58:03,915 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 17:58:35] 2025-10-07 22:58:03,915 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 17:58:35] 2025-10-07 22:58:03,915 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 17:58:35] 2025-10-07 22:58:03,915 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 17:58:35] 2025-10-07 22:58:03,915 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 17:58:35] 2025-10-07 22:58:03,915 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 17:58:35] 2025-10-07 22:58:03,915 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 17:58:35] 2025-10-07 22:58:03,915 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 17:58:35] 2025-10-07 22:58:03,915 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 17:58:35] 2025-10-07 22:58:03,915 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 17:58:35] 2025-10-07 22:58:03,915 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 17:58:35] 2025-10-07 22:58:03,915 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 17:58:35] 2025-10-07 22:58:03,915 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 17:58:35] 2025-10-07 22:58:03,915 | INFO     | job 6835263761 has completed (purged errors)
[2025-10-07 17:58:35] 2025-10-07 22:58:03,916 | INFO     | overall cleanup function is called
[2025-10-07 17:58:35] 2025-10-07 22:58:04,923 | INFO     | --- collectZombieJob: --- 10, [2341355]
[2025-10-07 17:58:35] 2025-10-07 22:58:04,923 | INFO     | zombie collector waiting for pid 2341355
[2025-10-07 17:58:35] 2025-10-07 22:58:04,923 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 17:58:35] 2025-10-07 22:58:04,923 | INFO     | collected zombie processes
[2025-10-07 17:58:35] 2025-10-07 22:58:04,923 | INFO     | will attempt to kill all subprocesses of pid=2341355
[2025-10-07 17:58:35] 2025-10-07 22:58:04,971 | INFO     | process IDs to be killed: [2341355] (in reverse order)
[2025-10-07 17:58:35] 2025-10-07 22:58:05,001 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 17:58:35] 2025-10-07 22:58:05,001 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 17:58:35] 2025-10-07 22:58:05,004 | INFO     | did not find any defunct processes belonging to 2341355
[2025-10-07 17:58:35] 2025-10-07 22:58:05,006 | INFO     | did not find any defunct processes belonging to 2341355
[2025-10-07 17:58:35] 2025-10-07 22:58:05,006 | INFO     | ready for new job
[2025-10-07 17:58:35] 2025-10-07 22:58:05,006 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 17:58:35] 2025-10-07 22:58:05,007 | INFO     | ***************************************
[2025-10-07 17:58:35] 2025-10-07 22:58:05,007 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 17:58:35] 2025-10-07 22:58:05,007 | INFO     | ***************************************
[2025-10-07 17:58:35] 2025-10-07 22:58:05,007 | INFO     | 
[2025-10-07 17:58:35] 2025-10-07 22:58:05,008 | INFO     | architecture information:
[2025-10-07 17:58:35] 2025-10-07 22:58:05,008 | INFO     | executing command: cat /etc/os-release
[2025-10-07 17:58:35] 2025-10-07 22:58:05,014 | INFO     | cat /etc/os-release:
[2025-10-07 17:58:35] NAME="CentOS Linux"
[2025-10-07 17:58:35] VERSION="7 (Core)"
[2025-10-07 17:58:35] ID="centos"
[2025-10-07 17:58:35] ID_LIKE="rhel fedora"
[2025-10-07 17:58:35] VERSION_ID="7"
[2025-10-07 17:58:35] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 17:58:35] ANSI_COLOR="0;31"
[2025-10-07 17:58:35] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 17:58:35] HOME_URL="https://www.centos.org/"
[2025-10-07 17:58:35] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 17:58:35] 
[2025-10-07 17:58:35] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 17:58:35] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 17:58:35] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 17:58:35] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 17:58:35] 
[2025-10-07 17:58:35] 2025-10-07 22:58:05,014 | INFO     | ***************************************
[2025-10-07 17:58:35] 2025-10-07 22:58:05,516 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-10-07 17:58:35] 2025-10-07 22:58:05,525 | INFO     | sufficient remaining disk space (3852359172096 B)
[2025-10-07 17:58:35] 2025-10-07 22:58:05,525 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 17:58:35] 2025-10-07 22:58:05,525 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 17:58:35] 2025-10-07 22:58:05,525 | INFO     | update_server=False
[2025-10-07 17:58:35] 2025-10-07 22:58:05,525 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 17:58:35] 2025-10-07 22:58:05,525 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 17:58:35] 2025-10-07 22:58:05,747 | INFO     | all payload control threads have been joined
[2025-10-07 17:58:35] 2025-10-07 22:58:05,836 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-10-07 17:58:35] 2025-10-07 22:58:05,836 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-10-07 17:58:35] 2025-10-07 22:58:05,836 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 17:58:35] 2025-10-07 22:58:05,837 | INFO     | will abort loop
[2025-10-07 17:58:35] 2025-10-07 22:58:06,352 | INFO     | all job control threads have been joined
[2025-10-07 17:58:35] 2025-10-07 22:58:06,483 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 17:58:35] 2025-10-07 22:58:06,530 | INFO     | [job] retrieve thread has finished
[2025-10-07 17:58:35] 2025-10-07 22:58:06,531 | INFO     | [job] queue monitor thread has finished
[2025-10-07 17:58:35] 2025-10-07 22:58:06,562 | INFO     | all data control threads have been joined
[2025-10-07 17:58:35] 2025-10-07 22:58:06,660 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 17:58:35] 2025-10-07 22:58:06,752 | INFO     | [payload] control thread has finished
[2025-10-07 17:58:35] 2025-10-07 22:58:06,842 | INFO     | [job] job monitor thread has finished
[2025-10-07 17:58:35] 2025-10-07 22:58:06,988 | INFO     | [job] validate thread has finished
[2025-10-07 17:58:35] 2025-10-07 22:58:07,099 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 17:58:35] 2025-10-07 22:58:07,173 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 17:58:35] 2025-10-07 22:58:07,292 | INFO     | [payload] validate_post thread has finished
[2025-10-07 17:58:35] 2025-10-07 22:58:07,357 | INFO     | [job] control thread has finished
[2025-10-07 17:58:35] 2025-10-07 22:58:07,400 | INFO     | [data] copytool_in thread has finished
[2025-10-07 17:58:35] 2025-10-07 22:58:07,567 | INFO     | [data] control thread has finished
[2025-10-07 17:58:35] 2025-10-07 22:58:07,951 | INFO     | [payload] failed_post thread has finished
[2025-10-07 17:58:35] 2025-10-07 22:58:08,489 | INFO     | [data] copytool_out thread has finished
[2025-10-07 17:58:35] 2025-10-07 22:58:09,015 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 17:58:35] 2025-10-07 22:58:13,020 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 17:58:35] 2025-10-07 22:58:15,592 | INFO     | job.realtimelogging is not enabled
[2025-10-07 17:58:35] 2025-10-07 22:58:16,597 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 17:58:35] 2025-10-07 22:58:17,776 | INFO     | [monitor] cgroup control has ended
[2025-10-07 17:58:35] 2025-10-07 22:58:19,011 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140502609479488)>', '<ExcThread(monitor, started 140501952993024)>']
[2025-10-07 17:58:35] 2025-10-07 22:58:24,035 | INFO     | all workflow threads have been joined
[2025-10-07 17:58:35] 2025-10-07 22:58:24,036 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 17:58:35] 2025-10-07 22:58:24,037 | INFO     | traces error code: 0
[2025-10-07 17:58:35] 2025-10-07 22:58:24,037 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 17:58:35] 2025-10-07 22:58:35,536 | INFO     | PID=2334495 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-07 17:58:35] 2025-10-07 22:58:35,536 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 17:58:35] 2025-10-07 22:58:35,536 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 17:58:35] 2025-10-07 22:58:35,536 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 17:58:35] 2025-10-07 22:58:35,536 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 17:58:35] 2025-10-07 22:58:35,536 | CRITICAL | thread 'MainThread' is not alive
[2025-10-07 17:58:35] 2025-10-07 22:58:35,536 | INFO     | [monitor] control thread has ended
[2025-10-07 17:58:35] 2025-10-07 22:58:35,603 [wrapper] ==== pilot stdout END ====
[2025-10-07 17:58:35] 2025-10-07 22:58:35,604 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 17:58:35] 2025-10-07 22:58:35,606 [wrapper] pilotpid: 2334495
[2025-10-07 17:58:35] 2025-10-07 22:58:35,607 [wrapper] Pilot exit status: 0
[2025-10-07 17:58:35] 2025-10-07 22:58:35,615 [wrapper] pandaids: 6835263761
[2025-10-07 17:58:35] 2025-10-07 22:58:35,632 [wrapper] cleanup supervisor_pilot 2361635 2334496
[2025-10-07 17:58:35] 2025-10-07 22:58:35,634 [wrapper] Test setup, not cleaning
[2025-10-07 17:58:35] 2025-10-07 22:58:35,634 [wrapper] apfmon messages muted
[2025-10-07 17:58:35] 2025-10-07 22:58:35,635 [wrapper] ==== wrapper stdout END ====
[2025-10-07 17:58:35] 2025-10-07 22:58:35,636 [wrapper] ==== wrapper stderr END ====
[2025-10-07 17:58:35]  *** Error codes and diagnostics ***
[2025-10-07 17:58:35]     "exeErrorCode": 0,
[2025-10-07 17:58:35]     "exeErrorDiag": "",
[2025-10-07 17:58:35]     "pilotErrorCode": 0,
[2025-10-07 17:58:35]     "pilotErrorDiag": "",
[2025-10-07 17:58:35]  *** Listing of results directory ***
[2025-10-07 17:58:35] total 389240
[2025-10-07 17:58:35] -rw-r--r--. 1 boinc boinc      5112 Oct  7 15:16 queuedata.json
[2025-10-07 17:58:35] -rw-r--r--. 1 boinc boinc    552446 Oct  7 15:17 pilot3.tar.gz
[2025-10-07 17:58:35] -rwx------. 1 boinc boinc     36292 Oct  7 15:17 runpilot2-wrapper.sh
[2025-10-07 17:58:35] -rw-r--r--. 1 boinc boinc       100 Oct  7 17:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 17:58:35] -rwxr-xr-x. 1 boinc boinc      7986 Oct  7 17:32 run_atlas
[2025-10-07 17:58:35] -rw-r--r--. 1 boinc boinc       105 Oct  7 17:32 job.xml
[2025-10-07 17:58:35] -rw-r--r--. 2 boinc boinc     15120 Oct  7 17:32 start_atlas.sh
[2025-10-07 17:58:35] drwxrwx--x. 1 boinc boinc        76 Oct  7 17:32 shared
[2025-10-07 17:58:35] -rw-r--r--. 2 boinc boinc    565603 Oct  7 17:32 input.tar.gz
[2025-10-07 17:58:35] -rw-r--r--. 1 boinc boinc     10054 Oct  7 17:32 init_data.xml
[2025-10-07 17:58:35] -rw-r--r--. 2 boinc boinc 213162179 Oct  7 17:32 EVNT.46376901._002968.pool.root.1
[2025-10-07 17:58:35] -rw-r--r--. 1 boinc boinc         0 Oct  7 17:32 boinc_setup_complete
[2025-10-07 17:58:35] -rw-r--r--. 1 boinc boinc         0 Oct  7 17:32 boinc_lockfile
[2025-10-07 17:58:35] -rw-r--r--. 1 boinc boinc      2519 Oct  7 17:32 pandaJob.out
[2025-10-07 17:58:35] -rw-------. 1 boinc boinc    979849 Oct  7 17:32 agis_schedconf.cvmfs.json
[2025-10-07 17:58:35] -rw-------. 1 boinc boinc   1560401 Oct  7 17:32 agis_ddmendpoints.agis.ALL.json
[2025-10-07 17:58:35] drwx------. 1 boinc boinc       368 Oct  7 17:32 pilot3
[2025-10-07 17:58:35] -rw-------. 1 boinc boinc 180356558 Oct  7 17:57 HITS.46376905._135409.pool.root.1
[2025-10-07 17:58:35] -rw-r--r--. 1 boinc boinc       529 Oct  7 17:57 boinc_task_state.xml
[2025-10-07 17:58:35] -rw-------. 1 boinc boinc      1026 Oct  7 17:57 memory_monitor_summary.json
[2025-10-07 17:58:35] -rw-------. 1 boinc boinc    329460 Oct  7 17:57 log.46376905._135409.job.log.tgz.1
[2025-10-07 17:58:35] -rw-------. 1 boinc boinc      7793 Oct  7 17:58 heartbeat.json
[2025-10-07 17:58:35] -rw-r--r--. 1 boinc boinc      8192 Oct  7 17:58 boinc_mmap_file
[2025-10-07 17:58:35] -rw-r--r--. 1 boinc boinc        27 Oct  7 17:58 wrapper_checkpoint.txt
[2025-10-07 17:58:35] -rw-------. 1 boinc boinc       817 Oct  7 17:58 pilotlog.txt
[2025-10-07 17:58:35] -rw-------. 1 boinc boinc        95 Oct  7 17:58 pilot_heartbeat.json
[2025-10-07 17:58:35] -rw-------. 1 boinc boinc    264675 Oct  7 17:58 log.46376905._135409.job.log.1
[2025-10-07 17:58:35] -rw-------. 1 boinc boinc       357 Oct  7 17:58 output.list
[2025-10-07 17:58:35] -rw-r--r--. 1 boinc boinc       620 Oct  7 17:58 runtime_log
[2025-10-07 17:58:35] -rw-------. 1 boinc boinc    614400 Oct  7 17:58 result.tar.gz
[2025-10-07 17:58:35] -rw-------. 1 boinc boinc       650 Oct  7 17:58 VRaLDmSITQ8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmiFXNDmXyq6Xo.diag
[2025-10-07 17:58:35] -rw-r--r--. 1 boinc boinc      8727 Oct  7 17:58 runtime_log.err
[2025-10-07 17:58:35] -rw-r--r--. 1 boinc boinc     21504 Oct  7 17:58 stderr.txt
[2025-10-07 17:58:35] HITS file was successfully produced:
[2025-10-07 17:58:35] -rw-------. 1 boinc boinc 180356558 Oct  7 17:57 shared/HITS.pool.root.1
[2025-10-07 17:58:35]  *** Contents of shared directory: ***
[2025-10-07 17:58:35] total 385472
[2025-10-07 17:58:35] -rw-r--r--. 2 boinc boinc     15120 Oct  7 17:32 start_atlas.sh
[2025-10-07 17:58:35] -rw-r--r--. 2 boinc boinc    565603 Oct  7 17:32 input.tar.gz
[2025-10-07 17:58:35] -rw-r--r--. 2 boinc boinc 213162179 Oct  7 17:32 ATLAS.root_0
[2025-10-07 17:58:35] -rw-------. 1 boinc boinc 180356558 Oct  7 17:57 HITS.pool.root.1
[2025-10-07 17:58:35] -rw-------. 1 boinc boinc    614400 Oct  7 17:58 result.tar.gz
17:58:37 (2330624): run_atlas exited; CPU time 16502.434333
17:58:37 (2330624): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN