Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
17:06:32 (2271915): wrapper (7.7.26015): starting
17:06:32 (2271915): wrapper: running run_atlas (--nthreads 12)
[2025-10-07 17:06:32] Arguments: --nthreads 12
[2025-10-07 17:06:32] Threads: 12
[2025-10-07 17:06:32] Checking for CVMFS
[2025-10-07 17:06:32] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 17:06:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 17:06:32] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 17:06:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 17:06:32] 2.13.2.0 193085 6915 54060 151448 0 188 16461593 16777216 916 130560 0 26167098 99.998 227987 1201 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://127.0.0.1:3128 1
[2025-10-07 17:06:32] CVMFS is ok
[2025-10-07 17:06:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 17:06:32] Checking for apptainer binary...
[2025-10-07 17:06:32] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-07 17:06:32] Running /usr/bin/apptainer --version
[2025-10-07 17:06:32] apptainer version 1.3.0-bp160.1.36
[2025-10-07 17:06:32] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 17:06:32] boinc-runner
[2025-10-07 17:06:32] apptainer works
[2025-10-07 17:06:33] Set ATHENA_PROC_NUMBER=12
[2025-10-07 17:06:33] Set ATHENA_CORE_NUMBER=12
[2025-10-07 17:06:33] Starting ATLAS job with PandaID=6835263754
[2025-10-07 17:06:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 17:32:04]  *** The last 200 lines of the pilot log: ***
[2025-10-07 17:32:04]  replicas=None
[2025-10-07 17:32:04]  scope=mc23_13p6TeV
[2025-10-07 17:32:04]  status=None
[2025-10-07 17:32:04]  status_code=0
[2025-10-07 17:32:04]  storage_token=
[2025-10-07 17:32:04]  surl=/var/lib/boinc/slots/6/PanDA_Pilot-6835263754/log.46376905._135402.job.log.tgz.1
[2025-10-07 17:32:04]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b6/a7/log.46376905._135402.job.log.tgz.1
[2025-10-07 17:32:04]  workdir=None
[2025-10-07 17:32:04] ]
[2025-10-07 17:32:04] 2025-10-07 22:31:26,737 | INFO     | transferring file log.46376905._135402.job.log.tgz.1 from /var/lib/boinc/slots/6/PanDA_Pilot-6835263754/log.46376905._135402.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-07 17:32:04] 2025-10-07 22:31:26,738 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/6/PanDA_Pilot-6835263754/log.46376905._135402.job.log.tgz.1 /var/lib/boinc/slots/6/log.46376905._135402.job
[2025-10-07 17:32:04] 2025-10-07 22:31:26,747 | INFO     | adding to output.list: log.46376905._135402.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/b6/a7/log.46376905._135402.job.log.tg
[2025-10-07 17:32:04] 2025-10-07 22:31:26,747 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-07 17:32:04] 2025-10-07 22:31:26,747 | INFO     | summary of transferred files:
[2025-10-07 17:32:04] 2025-10-07 22:31:26,747 | INFO     |  -- lfn=log.46376905._135402.job.log.tgz.1, status_code=0, status=transferred
[2025-10-07 17:32:04] 2025-10-07 22:31:26,747 | INFO     | stage-out finished correctly
[2025-10-07 17:32:04] 2025-10-07 22:31:27,015 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-07 17:32:04] 2025-10-07 22:31:27,344 | INFO     | job 6835263754 has state=finished
[2025-10-07 17:32:04] 2025-10-07 22:31:27,345 | INFO     | preparing for final server update for job 6835263754 in state='finished'
[2025-10-07 17:32:04] 2025-10-07 22:31:27,345 | INFO     | this job has now completed (state=finished)
[2025-10-07 17:32:04] 2025-10-07 22:31:27,345 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-07 17:32:04] 2025-10-07 22:31:27,345 | INFO     | log transfer has been attempted: DONE
[2025-10-07 17:32:04] 2025-10-07 22:31:27,345 | INFO     | job 6835263754 has finished - writing final server update
[2025-10-07 17:32:04] 2025-10-07 22:31:27,345 | INFO     | total number of processed events: 400 (read)
[2025-10-07 17:32:04] 2025-10-07 22:31:27,346 | INFO     | executing command: lscpu
[2025-10-07 17:32:04] 2025-10-07 22:31:27,353 | INFO     | time since job start (1488s) is within the limit (172800.0s)
[2025-10-07 17:32:04] 2025-10-07 22:31:27,363 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-07 17:32:04] 2025-10-07 22:31:29,188 | WARNING  | process 2282652 can no longer be monitored (due to stat problems) - aborting
[2025-10-07 17:32:04] 2025-10-07 22:31:29,188 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6835263754/memory_monitor_summary.json (trf name=prmon)
[2025-10-07 17:32:04] 2025-10-07 22:31:29,247 | INFO     | number of running child processes to parent process 2282652: 1
[2025-10-07 17:32:04] 2025-10-07 22:31:29,247 | INFO     | maximum number of monitored processes: 6
[2025-10-07 17:32:04] 2025-10-07 22:31:29,359 | INFO     | time since job start (1490s) is within the limit (172800.0s)
[2025-10-07 17:32:04] 2025-10-07 22:31:31,363 | INFO     | time since job start (1492s) is within the limit (172800.0s)
[2025-10-07 17:32:04] 2025-10-07 22:31:31,750 | INFO     | monitor loop #117: job 0:6835263754 is in state 'finished'
[2025-10-07 17:32:04] 2025-10-07 22:31:31,750 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 17:32:04] 2025-10-07 22:31:32,617 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-07 17:32:04] 2025-10-07 22:31:32,620 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4249.1853125
[2025-10-07 17:32:04] 2025-10-07 22:31:32,623 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6835263754/memory_monitor_summary.json (trf name=prmon)
[2025-10-07 17:32:04] 2025-10-07 22:31:32,623 | INFO     | extracted standard info from prmon json
[2025-10-07 17:32:04] 2025-10-07 22:31:32,623 | INFO     | extracted standard memory fields from prmon json
[2025-10-07 17:32:04] 2025-10-07 22:31:32,623 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-07 17:32:04] 2025-10-07 22:31:32,623 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-07 17:32:04] 2025-10-07 22:31:32,623 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 17:32:04] 2025-10-07 22:31:32,624 | INFO     | fitting pss+swap vs Time
[2025-10-07 17:32:04] 2025-10-07 22:31:32,624 | INFO     | sum of square deviations: 1802824.5
[2025-10-07 17:32:04] 2025-10-07 22:31:32,624 | INFO     | sum of deviations: -332935346.5
[2025-10-07 17:32:04] 2025-10-07 22:31:32,624 | INFO     | mean x: 1759875639.5
[2025-10-07 17:32:04] 2025-10-07 22:31:32,624 | INFO     | mean y: 2755082.9444444445
[2025-10-07 17:32:04] 2025-10-07 22:31:32,624 | INFO     | -- intersect: 325006550978.6856
[2025-10-07 17:32:04] 2025-10-07 22:31:32,624 | INFO     | intersect: 325006550978.6856
[2025-10-07 17:32:04] 2025-10-07 22:31:32,624 | INFO     | chi2: 0.008989004508891828
[2025-10-07 17:32:04] 2025-10-07 22:31:32,624 | INFO     | -- intersect: 325006550978.6856
[2025-10-07 17:32:04] 2025-10-07 22:31:32,624 | INFO     | current memory leak: -184.67 B/s (using 18 data points, chi2=0.01)
[2025-10-07 17:32:04] 2025-10-07 22:31:32,625 | INFO     | could have reported an average CPU frequency of 4228 MHz (4 samples)
[2025-10-07 17:32:04] 2025-10-07 22:31:32,625 | INFO     | ..............................
[2025-10-07 17:32:04] 2025-10-07 22:31:32,625 | INFO     | . Timing measurements:
[2025-10-07 17:32:04] 2025-10-07 22:31:32,625 | INFO     | . get job = 0 s
[2025-10-07 17:32:04] 2025-10-07 22:31:32,625 | INFO     | . initial setup = 2 s
[2025-10-07 17:32:04] 2025-10-07 22:31:32,625 | INFO     | . payload setup = 2 s
[2025-10-07 17:32:04] 2025-10-07 22:31:32,625 | INFO     | . stage-in = 0 s
[2025-10-07 17:32:04] 2025-10-07 22:31:32,625 | INFO     | . payload execution = 1468 s
[2025-10-07 17:32:04] 2025-10-07 22:31:32,625 | INFO     | . stage-out = 0 s
[2025-10-07 17:32:04] 2025-10-07 22:31:32,625 | INFO     | . log creation = 0 s
[2025-10-07 17:32:04] 2025-10-07 22:31:32,625 | INFO     | ..............................
[2025-10-07 17:32:04] 2025-10-07 22:31:32,662 | INFO     | 
[2025-10-07 17:32:04] 2025-10-07 22:31:32,662 | INFO     | job summary report
[2025-10-07 17:32:04] 2025-10-07 22:31:32,662 | INFO     | --------------------------------------------------
[2025-10-07 17:32:04] 2025-10-07 22:31:32,662 | INFO     | PanDA job id: 6835263754
[2025-10-07 17:32:04] 2025-10-07 22:31:32,662 | INFO     | task id: 46376905
[2025-10-07 17:32:04] 2025-10-07 22:31:32,662 | INFO     | errors: (none)
[2025-10-07 17:32:04] 2025-10-07 22:31:32,662 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 17:32:04] 2025-10-07 22:31:32,662 | INFO     | pilot state: finished 
[2025-10-07 17:32:04] 2025-10-07 22:31:32,662 | INFO     | transexitcode: 0
[2025-10-07 17:32:04] 2025-10-07 22:31:32,662 | INFO     | exeerrorcode: 0
[2025-10-07 17:32:04] 2025-10-07 22:31:32,662 | INFO     | exeerrordiag: 
[2025-10-07 17:32:04] 2025-10-07 22:31:32,662 | INFO     | exitcode: 0
[2025-10-07 17:32:04] 2025-10-07 22:31:32,662 | INFO     | exitmsg: OK
[2025-10-07 17:32:04] 2025-10-07 22:31:32,662 | INFO     | cpuconsumptiontime: 15792 s
[2025-10-07 17:32:04] 2025-10-07 22:31:32,662 | INFO     | nevents: 400
[2025-10-07 17:32:04] 2025-10-07 22:31:32,662 | INFO     | neventsw: 0
[2025-10-07 17:32:04] 2025-10-07 22:31:32,662 | INFO     | pid: 2282652
[2025-10-07 17:32:04] 2025-10-07 22:31:32,662 | INFO     | pgrp: 2282652
[2025-10-07 17:32:04] 2025-10-07 22:31:32,662 | INFO     | corecount: 12
[2025-10-07 17:32:04] 2025-10-07 22:31:32,662 | INFO     | event service: False
[2025-10-07 17:32:04] 2025-10-07 22:31:32,662 | INFO     | sizes: {0: 2348770, 2: 2349032, 11: 2349060, 1474: 2373844, 1476: 2382898, 1481: 2383036}
[2025-10-07 17:32:04] 2025-10-07 22:31:32,662 | INFO     | --------------------------------------------------
[2025-10-07 17:32:04] 2025-10-07 22:31:32,662 | INFO     | 
[2025-10-07 17:32:04] 2025-10-07 22:31:32,663 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-10-07 17:32:04] 2025-10-07 22:31:32,674 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 17:32:04] 2025-10-07 22:31:32,674 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 17:32:04] 2025-10-07 22:31:32,674 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 17:32:04] 2025-10-07 22:31:32,674 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 17:32:04] 2025-10-07 22:31:32,674 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 17:32:04] 2025-10-07 22:31:32,674 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 17:32:04] 2025-10-07 22:31:32,674 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 17:32:04] 2025-10-07 22:31:32,674 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 17:32:04] 2025-10-07 22:31:32,674 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 17:32:04] 2025-10-07 22:31:32,674 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 17:32:04] 2025-10-07 22:31:32,674 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 17:32:04] 2025-10-07 22:31:32,675 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 17:32:04] 2025-10-07 22:31:32,675 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 17:32:04] 2025-10-07 22:31:32,675 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 17:32:04] 2025-10-07 22:31:32,675 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 17:32:04] 2025-10-07 22:31:32,675 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 17:32:04] 2025-10-07 22:31:32,675 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 17:32:04] 2025-10-07 22:31:32,675 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 17:32:04] 2025-10-07 22:31:32,675 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 17:32:04] 2025-10-07 22:31:32,675 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 17:32:04] 2025-10-07 22:31:32,675 | INFO     | job 6835263754 has completed (purged errors)
[2025-10-07 17:32:04] 2025-10-07 22:31:32,675 | INFO     | overall cleanup function is called
[2025-10-07 17:32:04] 2025-10-07 22:31:33,683 | INFO     | --- collectZombieJob: --- 10, [2282652]
[2025-10-07 17:32:04] 2025-10-07 22:31:33,683 | INFO     | zombie collector waiting for pid 2282652
[2025-10-07 17:32:04] 2025-10-07 22:31:33,683 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 17:32:04] 2025-10-07 22:31:33,684 | INFO     | collected zombie processes
[2025-10-07 17:32:04] 2025-10-07 22:31:33,684 | INFO     | will attempt to kill all subprocesses of pid=2282652
[2025-10-07 17:32:04] 2025-10-07 22:31:33,741 | INFO     | process IDs to be killed: [2282652] (in reverse order)
[2025-10-07 17:32:04] 2025-10-07 22:31:33,770 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 17:32:04] 2025-10-07 22:31:33,770 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 17:32:04] 2025-10-07 22:31:33,773 | INFO     | did not find any defunct processes belonging to 2282652
[2025-10-07 17:32:04] 2025-10-07 22:31:33,777 | INFO     | did not find any defunct processes belonging to 2282652
[2025-10-07 17:32:04] 2025-10-07 22:31:33,777 | INFO     | ready for new job
[2025-10-07 17:32:04] 2025-10-07 22:31:33,777 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 17:32:04] 2025-10-07 22:31:33,778 | INFO     | ***************************************
[2025-10-07 17:32:04] 2025-10-07 22:31:33,778 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 17:32:04] 2025-10-07 22:31:33,778 | INFO     | ***************************************
[2025-10-07 17:32:04] 2025-10-07 22:31:33,778 | INFO     | 
[2025-10-07 17:32:04] 2025-10-07 22:31:33,779 | INFO     | architecture information:
[2025-10-07 17:32:04] 2025-10-07 22:31:33,779 | INFO     | executing command: cat /etc/os-release
[2025-10-07 17:32:04] 2025-10-07 22:31:33,788 | INFO     | cat /etc/os-release:
[2025-10-07 17:32:04] NAME="CentOS Linux"
[2025-10-07 17:32:04] VERSION="7 (Core)"
[2025-10-07 17:32:04] ID="centos"
[2025-10-07 17:32:04] ID_LIKE="rhel fedora"
[2025-10-07 17:32:04] VERSION_ID="7"
[2025-10-07 17:32:04] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 17:32:04] ANSI_COLOR="0;31"
[2025-10-07 17:32:04] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 17:32:04] HOME_URL="https://www.centos.org/"
[2025-10-07 17:32:04] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 17:32:04] 
[2025-10-07 17:32:04] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 17:32:04] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 17:32:04] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 17:32:04] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 17:32:04] 
[2025-10-07 17:32:04] 2025-10-07 22:31:33,788 | INFO     | ***************************************
[2025-10-07 17:32:04] 2025-10-07 22:31:34,290 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-10-07 17:32:04] 2025-10-07 22:31:34,299 | INFO     | sufficient remaining disk space (3851490951168 B)
[2025-10-07 17:32:04] 2025-10-07 22:31:34,299 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 17:32:04] 2025-10-07 22:31:34,299 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 17:32:04] 2025-10-07 22:31:34,299 | INFO     | update_server=False
[2025-10-07 17:32:04] 2025-10-07 22:31:34,299 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 17:32:04] 2025-10-07 22:31:34,300 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 17:32:04] 2025-10-07 22:31:34,721 | INFO     | all data control threads have been joined
[2025-10-07 17:32:04] 2025-10-07 22:31:34,790 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 17:32:04] 2025-10-07 22:31:34,896 | INFO     | all payload control threads have been joined
[2025-10-07 17:32:04] 2025-10-07 22:31:35,100 | INFO     | all job control threads have been joined
[2025-10-07 17:32:04] 2025-10-07 22:31:35,258 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 17:32:04] 2025-10-07 22:31:35,258 | INFO     | aborting loop
[2025-10-07 17:32:04] 2025-10-07 22:31:35,304 | INFO     | [job] retrieve thread has finished
[2025-10-07 17:32:04] 2025-10-07 22:31:35,305 | INFO     | [job] queue monitor thread has finished
[2025-10-07 17:32:04] 2025-10-07 22:31:35,390 | INFO     | [data] copytool_in thread has finished
[2025-10-07 17:32:04] 2025-10-07 22:31:35,639 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 17:32:04] 2025-10-07 22:31:35,726 | INFO     | [data] control thread has finished
[2025-10-07 17:32:04] 2025-10-07 22:31:35,901 | INFO     | [payload] control thread has finished
[2025-10-07 17:32:04] 2025-10-07 22:31:36,105 | INFO     | [job] control thread has finished
[2025-10-07 17:32:04] 2025-10-07 22:31:36,263 | INFO     | [job] job monitor thread has finished
[2025-10-07 17:32:04] 2025-10-07 22:31:36,284 | INFO     | [payload] validate_post thread has finished
[2025-10-07 17:32:04] 2025-10-07 22:31:36,372 | INFO     | [job] validate thread has finished
[2025-10-07 17:32:04] 2025-10-07 22:31:36,499 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 17:32:04] 2025-10-07 22:31:36,528 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 17:32:04] 2025-10-07 22:31:36,796 | INFO     | [data] copytool_out thread has finished
[2025-10-07 17:32:04] 2025-10-07 22:31:36,865 | INFO     | [payload] failed_post thread has finished
[2025-10-07 17:32:04] 2025-10-07 22:31:37,559 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 17:32:04] 2025-10-07 22:31:41,089 | INFO     | [monitor] cgroup control has ended
[2025-10-07 17:32:04] 2025-10-07 22:31:41,564 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 17:32:04] 2025-10-07 22:31:44,632 | INFO     | job.realtimelogging is not enabled
[2025-10-07 17:32:04] 2025-10-07 22:31:45,637 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 17:32:04] 2025-10-07 22:31:47,036 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140279379810112)>', '<ExcThread(monitor, started 140278530832128)>']
[2025-10-07 17:32:04] 2025-10-07 22:31:52,061 | INFO     | all workflow threads have been joined
[2025-10-07 17:32:04] 2025-10-07 22:31:52,061 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 17:32:04] 2025-10-07 22:31:52,062 | INFO     | traces error code: 0
[2025-10-07 17:32:04] 2025-10-07 22:31:52,062 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 17:32:04] 2025-10-07 22:32:04,502 | INFO     | PID=2275792 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-07 17:32:04] 2025-10-07 22:32:04,502 | INFO     | .. there are 2 such processes running
[2025-10-07 17:32:04] 2025-10-07 22:32:04,503 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 17:32:04] 2025-10-07 22:32:04,503 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 17:32:04] 2025-10-07 22:32:04,503 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 17:32:04] 2025-10-07 22:32:04,503 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 17:32:04] 2025-10-07 22:32:04,503 | INFO     | [monitor] control thread has ended
[2025-10-07 17:32:04] 2025-10-07 22:32:04,561 [wrapper] ==== pilot stdout END ====
[2025-10-07 17:32:04] 2025-10-07 22:32:04,562 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 17:32:04] 2025-10-07 22:32:04,563 [wrapper] pilotpid: 2275792
[2025-10-07 17:32:04] 2025-10-07 22:32:04,564 [wrapper] Pilot exit status: 0
[2025-10-07 17:32:04] 2025-10-07 22:32:04,568 [wrapper] pandaids: 6835263754
[2025-10-07 17:32:04] 2025-10-07 22:32:04,586 [wrapper] cleanup supervisor_pilot 2320037 2275793
[2025-10-07 17:32:04] 2025-10-07 22:32:04,588 [wrapper] Test setup, not cleaning
[2025-10-07 17:32:04] 2025-10-07 22:32:04,589 [wrapper] apfmon messages muted
[2025-10-07 17:32:04] 2025-10-07 22:32:04,592 [wrapper] ==== wrapper stdout END ====
[2025-10-07 17:32:04] 2025-10-07 22:32:04,593 [wrapper] ==== wrapper stderr END ====
[2025-10-07 17:32:04]  *** Error codes and diagnostics ***
[2025-10-07 17:32:04]     "exeErrorCode": 0,
[2025-10-07 17:32:04]     "exeErrorDiag": "",
[2025-10-07 17:32:04]     "pilotErrorCode": 0,
[2025-10-07 17:32:04]     "pilotErrorDiag": "",
[2025-10-07 17:32:04]  *** Listing of results directory ***
[2025-10-07 17:32:04] total 393520
[2025-10-07 17:32:04] -rw-r--r--. 1 boinc boinc      5112 Oct  7 15:16 queuedata.json
[2025-10-07 17:32:04] -rw-r--r--. 1 boinc boinc    552446 Oct  7 15:17 pilot3.tar.gz
[2025-10-07 17:32:04] -rwx------. 1 boinc boinc     36292 Oct  7 15:17 runpilot2-wrapper.sh
[2025-10-07 17:32:04] -rw-r--r--. 1 boinc boinc       100 Oct  7 17:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 17:32:04] -rwxr-xr-x. 1 boinc boinc      7986 Oct  7 17:06 run_atlas
[2025-10-07 17:32:04] -rw-r--r--. 1 boinc boinc       105 Oct  7 17:06 job.xml
[2025-10-07 17:32:04] -rw-r--r--. 2 boinc boinc 216713871 Oct  7 17:06 EVNT.46376901._004853.pool.root.1
[2025-10-07 17:32:04] -rw-r--r--. 2 boinc boinc     15120 Oct  7 17:06 start_atlas.sh
[2025-10-07 17:32:04] drwxrwx--x. 1 boinc boinc        76 Oct  7 17:06 shared
[2025-10-07 17:32:04] -rw-r--r--. 2 boinc boinc    565604 Oct  7 17:06 input.tar.gz
[2025-10-07 17:32:04] -rw-r--r--. 1 boinc boinc     10054 Oct  7 17:06 init_data.xml
[2025-10-07 17:32:04] -rw-r--r--. 1 boinc boinc         0 Oct  7 17:06 boinc_setup_complete
[2025-10-07 17:32:04] -rw-r--r--. 1 boinc boinc         0 Oct  7 17:06 boinc_lockfile
[2025-10-07 17:32:04] -rw-r--r--. 1 boinc boinc      2521 Oct  7 17:06 pandaJob.out
[2025-10-07 17:32:04] -rw-------. 1 boinc boinc    979849 Oct  7 17:06 agis_schedconf.cvmfs.json
[2025-10-07 17:32:04] -rw-------. 1 boinc boinc   1560401 Oct  7 17:06 agis_ddmendpoints.agis.ALL.json
[2025-10-07 17:32:04] drwx------. 1 boinc boinc       368 Oct  7 17:06 pilot3
[2025-10-07 17:32:04] -rw-r--r--. 1 boinc boinc       529 Oct  7 17:31 boinc_task_state.xml
[2025-10-07 17:32:04] -rw-------. 1 boinc boinc 181189608 Oct  7 17:31 HITS.46376905._135402.pool.root.1
[2025-10-07 17:32:04] -rw-------. 1 boinc boinc      1028 Oct  7 17:31 memory_monitor_summary.json
[2025-10-07 17:32:04] -rw-------. 1 boinc boinc    336232 Oct  7 17:31 log.46376905._135402.job.log.tgz.1
[2025-10-07 17:32:04] -rw-------. 1 boinc boinc      7797 Oct  7 17:31 heartbeat.json
[2025-10-07 17:32:04] -rw-r--r--. 1 boinc boinc      8192 Oct  7 17:31 boinc_mmap_file
[2025-10-07 17:32:04] -rw-r--r--. 1 boinc boinc        27 Oct  7 17:32 wrapper_checkpoint.txt
[2025-10-07 17:32:04] -rw-------. 1 boinc boinc       822 Oct  7 17:32 pilotlog.txt
[2025-10-07 17:32:04] -rw-------. 1 boinc boinc        95 Oct  7 17:32 pilot_heartbeat.json
[2025-10-07 17:32:04] -rw-------. 1 boinc boinc    257934 Oct  7 17:32 log.46376905._135402.job.log.1
[2025-10-07 17:32:04] -rw-------. 1 boinc boinc       357 Oct  7 17:32 output.list
[2025-10-07 17:32:04] -rw-r--r--. 1 boinc boinc       620 Oct  7 17:32 runtime_log
[2025-10-07 17:32:04] -rw-------. 1 boinc boinc    614400 Oct  7 17:32 result.tar.gz
[2025-10-07 17:32:04] -rw-r--r--. 1 boinc boinc      8727 Oct  7 17:32 runtime_log.err
[2025-10-07 17:32:04] -rw-------. 1 boinc boinc       652 Oct  7 17:32 o2bMDmRITQ8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmbFXNDm6PNrwm.diag
[2025-10-07 17:32:04] -rw-r--r--. 1 boinc boinc     21502 Oct  7 17:32 stderr.txt
[2025-10-07 17:32:04] HITS file was successfully produced:
[2025-10-07 17:32:04] -rw-------. 1 boinc boinc 181189608 Oct  7 17:31 shared/HITS.pool.root.1
[2025-10-07 17:32:04]  *** Contents of shared directory: ***
[2025-10-07 17:32:04] total 389752
[2025-10-07 17:32:04] -rw-r--r--. 2 boinc boinc 216713871 Oct  7 17:06 ATLAS.root_0
[2025-10-07 17:32:04] -rw-r--r--. 2 boinc boinc     15120 Oct  7 17:06 start_atlas.sh
[2025-10-07 17:32:04] -rw-r--r--. 2 boinc boinc    565604 Oct  7 17:06 input.tar.gz
[2025-10-07 17:32:04] -rw-------. 1 boinc boinc 181189608 Oct  7 17:31 HITS.pool.root.1
[2025-10-07 17:32:04] -rw-------. 1 boinc boinc    614400 Oct  7 17:32 result.tar.gz
17:32:06 (2271915): run_atlas exited; CPU time 15796.279472
17:32:06 (2271915): called boinc_finish(0)

</stderr_txt>
]]>

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