Stderr output

<core_client_version>8.2.5</core_client_version>
<![CDATA[
<stderr_txt>
17:19:13 (2301162): wrapper (7.7.26015): starting
17:19:13 (2301162): wrapper: running run_atlas (--nthreads 12)
[2025-10-07 17:19:13] Arguments: --nthreads 12
[2025-10-07 17:19:13] Threads: 12
[2025-10-07 17:19:13] Checking for CVMFS
[2025-10-07 17:19:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 17:19:13] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 17:19:13] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 17:19:13] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 17:19:13] 2.13.2.0 193085 6927 53688 151450 0 11 16469580 16777216 916 130560 0 26221083 99.998 230574 1210 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch http://127.0.0.1:3128 1
[2025-10-07 17:19:13] CVMFS is ok
[2025-10-07 17:19:13] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 17:19:13] Checking for apptainer binary...
[2025-10-07 17:19:13] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-07 17:19:13] Running /usr/bin/apptainer --version
[2025-10-07 17:19:13] apptainer version 1.3.0-bp160.1.36
[2025-10-07 17:19:13] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 17:19:13] boinc-runner
[2025-10-07 17:19:13] apptainer works
[2025-10-07 17:19:13] Set ATHENA_PROC_NUMBER=12
[2025-10-07 17:19:13] Set ATHENA_CORE_NUMBER=12
[2025-10-07 17:19:13] Starting ATLAS job with PandaID=6835263749
[2025-10-07 17:19:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/5 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 17:46:41]  *** The last 200 lines of the pilot log: ***
[2025-10-07 17:46:41]  status=None
[2025-10-07 17:46:41]  status_code=0
[2025-10-07 17:46:41]  storage_token=
[2025-10-07 17:46:41]  surl=/var/lib/boinc/slots/5/PanDA_Pilot-6835263749/log.46376905._135397.job.log.tgz.1
[2025-10-07 17:46:41]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4e/ea/log.46376905._135397.job.log.tgz.1
[2025-10-07 17:46:41]  workdir=None
[2025-10-07 17:46:41] ]
[2025-10-07 17:46:41] 2025-10-07 22:46:13,729 | INFO     | transferring file log.46376905._135397.job.log.tgz.1 from /var/lib/boinc/slots/5/PanDA_Pilot-6835263749/log.46376905._135397.job.log.tgz.1 to /var/lib/boinc/slots/
[2025-10-07 17:46:41] 2025-10-07 22:46:13,729 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/5/PanDA_Pilot-6835263749/log.46376905._135397.job.log.tgz.1 /var/lib/boinc/slots/5/log.46376905._135397.job
[2025-10-07 17:46:41] 2025-10-07 22:46:13,737 | INFO     | adding to output.list: log.46376905._135397.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/4e/ea/log.46376905._135397.job.log.tg
[2025-10-07 17:46:41] 2025-10-07 22:46:13,738 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-07 17:46:41] 2025-10-07 22:46:13,738 | INFO     | summary of transferred files:
[2025-10-07 17:46:41] 2025-10-07 22:46:13,738 | INFO     |  -- lfn=log.46376905._135397.job.log.tgz.1, status_code=0, status=transferred
[2025-10-07 17:46:41] 2025-10-07 22:46:13,738 | INFO     | stage-out finished correctly
[2025-10-07 17:46:41] 2025-10-07 22:46:13,860 | INFO     | monitor loop #126: job 0:6835263749 is in state 'finished'
[2025-10-07 17:46:41] 2025-10-07 22:46:13,860 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 17:46:41] 2025-10-07 22:46:14,827 | INFO     | time since job start (1613s) is within the limit (172800.0s)
[2025-10-07 17:46:41] 2025-10-07 22:46:14,865 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-07 17:46:41] 2025-10-07 22:46:16,362 | INFO     | monitor loop #127: job 0:6835263749 is in state 'finished'
[2025-10-07 17:46:41] 2025-10-07 22:46:16,362 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 17:46:41] 2025-10-07 22:46:16,831 | INFO     | time since job start (1615s) is within the limit (172800.0s)
[2025-10-07 17:46:41] 2025-10-07 22:46:17,391 | INFO     | job 6835263749 has state=finished
[2025-10-07 17:46:41] 2025-10-07 22:46:17,392 | INFO     | preparing for final server update for job 6835263749 in state='finished'
[2025-10-07 17:46:41] 2025-10-07 22:46:17,392 | INFO     | this job has now completed (state=finished)
[2025-10-07 17:46:41] 2025-10-07 22:46:17,392 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-07 17:46:41] 2025-10-07 22:46:17,392 | INFO     | log transfer has been attempted: DONE
[2025-10-07 17:46:41] 2025-10-07 22:46:17,392 | INFO     | job 6835263749 has finished - writing final server update
[2025-10-07 17:46:41] 2025-10-07 22:46:17,392 | INFO     | total number of processed events: 400 (read)
[2025-10-07 17:46:41] 2025-10-07 22:46:17,393 | INFO     | executing command: lscpu
[2025-10-07 17:46:41] 2025-10-07 22:46:17,408 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-07 17:46:41] 2025-10-07 22:46:17,908 | INFO     | PID=2305046 has CPU usage=3.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-10-07 17:46:41] 2025-10-07 22:46:17,908 | INFO     | .. there are 2 such processes running
[2025-10-07 17:46:41] 2025-10-07 22:46:18,864 | INFO     | monitor loop #128: job 0:6835263749 is in state 'finished'
[2025-10-07 17:46:41] 2025-10-07 22:46:18,864 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 17:46:41] 2025-10-07 22:46:18,908 | INFO     | time since job start (1617s) is within the limit (172800.0s)
[2025-10-07 17:46:41] 2025-10-07 22:46:20,913 | INFO     | time since job start (1619s) is within the limit (172800.0s)
[2025-10-07 17:46:41] 2025-10-07 22:46:21,058 | INFO     | CPU arch script returned: x86-64-v4
[2025-10-07 17:46:41] 2025-10-07 22:46:21,061 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4206.027718749999
[2025-10-07 17:46:41] 2025-10-07 22:46:21,063 | INFO     | using path: /var/lib/boinc/slots/5/PanDA_Pilot-6835263749/memory_monitor_summary.json (trf name=prmon)
[2025-10-07 17:46:41] 2025-10-07 22:46:21,064 | INFO     | extracted standard info from prmon json
[2025-10-07 17:46:41] 2025-10-07 22:46:21,064 | INFO     | extracted standard memory fields from prmon json
[2025-10-07 17:46:41] 2025-10-07 22:46:21,064 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-07 17:46:41] 2025-10-07 22:46:21,064 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-07 17:46:41] 2025-10-07 22:46:21,064 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 17:46:41] 2025-10-07 22:46:21,064 | INFO     | fitting pss+swap vs Time
[2025-10-07 17:46:41] 2025-10-07 22:46:21,064 | INFO     | sum of square deviations: 2474465.0
[2025-10-07 17:46:41] 2025-10-07 22:46:21,064 | INFO     | sum of deviations: -367009031.5
[2025-10-07 17:46:41] 2025-10-07 22:46:21,064 | INFO     | mean x: 1759876462.5
[2025-10-07 17:46:41] 2025-10-07 22:46:21,064 | INFO     | mean y: 2870633.15
[2025-10-07 17:46:41] 2025-10-07 22:46:21,064 | INFO     | -- intersect: 261025174873.36798
[2025-10-07 17:46:41] 2025-10-07 22:46:21,064 | INFO     | intersect: 261025174873.36798
[2025-10-07 17:46:41] 2025-10-07 22:46:21,065 | INFO     | chi2: 0.0030143511513253682
[2025-10-07 17:46:41] 2025-10-07 22:46:21,065 | INFO     | -- intersect: 261025174873.36798
[2025-10-07 17:46:41] 2025-10-07 22:46:21,065 | INFO     | current memory leak: -148.32 B/s (using 20 data points, chi2=0.00)
[2025-10-07 17:46:41] 2025-10-07 22:46:21,065 | INFO     | could have reported an average CPU frequency of 4086 MHz (4 samples)
[2025-10-07 17:46:41] 2025-10-07 22:46:21,065 | INFO     | ..............................
[2025-10-07 17:46:41] 2025-10-07 22:46:21,065 | INFO     | . Timing measurements:
[2025-10-07 17:46:41] 2025-10-07 22:46:21,065 | INFO     | . get job = 0 s
[2025-10-07 17:46:41] 2025-10-07 22:46:21,065 | INFO     | . initial setup = 3 s
[2025-10-07 17:46:41] 2025-10-07 22:46:21,065 | INFO     | . payload setup = 2 s
[2025-10-07 17:46:41] 2025-10-07 22:46:21,065 | INFO     | . stage-in = 0 s
[2025-10-07 17:46:41] 2025-10-07 22:46:21,065 | INFO     | . payload execution = 1593 s
[2025-10-07 17:46:41] 2025-10-07 22:46:21,065 | INFO     | . stage-out = 0 s
[2025-10-07 17:46:41] 2025-10-07 22:46:21,065 | INFO     | . log creation = 0 s
[2025-10-07 17:46:41] 2025-10-07 22:46:21,065 | INFO     | ..............................
[2025-10-07 17:46:41] 2025-10-07 22:46:21,098 | INFO     | 
[2025-10-07 17:46:41] 2025-10-07 22:46:21,099 | INFO     | job summary report
[2025-10-07 17:46:41] 2025-10-07 22:46:21,099 | INFO     | --------------------------------------------------
[2025-10-07 17:46:41] 2025-10-07 22:46:21,099 | INFO     | PanDA job id: 6835263749
[2025-10-07 17:46:41] 2025-10-07 22:46:21,099 | INFO     | task id: 46376905
[2025-10-07 17:46:41] 2025-10-07 22:46:21,099 | INFO     | errors: (none)
[2025-10-07 17:46:41] 2025-10-07 22:46:21,099 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 17:46:41] 2025-10-07 22:46:21,099 | INFO     | pilot state: finished 
[2025-10-07 17:46:41] 2025-10-07 22:46:21,099 | INFO     | transexitcode: 0
[2025-10-07 17:46:41] 2025-10-07 22:46:21,099 | INFO     | exeerrorcode: 0
[2025-10-07 17:46:41] 2025-10-07 22:46:21,099 | INFO     | exeerrordiag: 
[2025-10-07 17:46:41] 2025-10-07 22:46:21,099 | INFO     | exitcode: 0
[2025-10-07 17:46:41] 2025-10-07 22:46:21,099 | INFO     | exitmsg: OK
[2025-10-07 17:46:41] 2025-10-07 22:46:21,099 | INFO     | cpuconsumptiontime: 17138 s
[2025-10-07 17:46:41] 2025-10-07 22:46:21,099 | INFO     | nevents: 400
[2025-10-07 17:46:41] 2025-10-07 22:46:21,099 | INFO     | neventsw: 0
[2025-10-07 17:46:41] 2025-10-07 22:46:21,099 | INFO     | pid: 2311919
[2025-10-07 17:46:41] 2025-10-07 22:46:21,099 | INFO     | pgrp: 2311919
[2025-10-07 17:46:41] 2025-10-07 22:46:21,099 | INFO     | corecount: 12
[2025-10-07 17:46:41] 2025-10-07 22:46:21,099 | INFO     | event service: False
[2025-10-07 17:46:41] 2025-10-07 22:46:21,099 | INFO     | sizes: {0: 2348816, 2: 2349078, 11: 2349106, 1599: 2373940, 1601: 2382938, 1602: 2382994, 1608: 2383316}
[2025-10-07 17:46:41] 2025-10-07 22:46:21,099 | INFO     | --------------------------------------------------
[2025-10-07 17:46:41] 2025-10-07 22:46:21,099 | INFO     | 
[2025-10-07 17:46:41] 2025-10-07 22:46:21,099 | INFO     | executing command: ls -lF /var/lib/boinc/slots/5
[2025-10-07 17:46:41] 2025-10-07 22:46:21,109 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 17:46:41] 2025-10-07 22:46:21,110 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 17:46:41] 2025-10-07 22:46:21,110 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 17:46:41] 2025-10-07 22:46:21,110 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 17:46:41] 2025-10-07 22:46:21,110 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 17:46:41] 2025-10-07 22:46:21,110 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 17:46:41] 2025-10-07 22:46:21,110 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 17:46:41] 2025-10-07 22:46:21,110 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 17:46:41] 2025-10-07 22:46:21,110 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 17:46:41] 2025-10-07 22:46:21,110 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 17:46:41] 2025-10-07 22:46:21,110 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 17:46:41] 2025-10-07 22:46:21,110 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 17:46:41] 2025-10-07 22:46:21,110 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 17:46:41] 2025-10-07 22:46:21,110 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 17:46:41] 2025-10-07 22:46:21,110 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 17:46:41] 2025-10-07 22:46:21,110 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 17:46:41] 2025-10-07 22:46:21,110 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 17:46:41] 2025-10-07 22:46:21,110 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 17:46:41] 2025-10-07 22:46:21,110 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 17:46:41] 2025-10-07 22:46:21,110 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 17:46:41] 2025-10-07 22:46:21,110 | INFO     | job 6835263749 has completed (purged errors)
[2025-10-07 17:46:41] 2025-10-07 22:46:21,110 | INFO     | overall cleanup function is called
[2025-10-07 17:46:41] 2025-10-07 22:46:22,118 | INFO     | --- collectZombieJob: --- 10, [2311919]
[2025-10-07 17:46:41] 2025-10-07 22:46:22,118 | INFO     | zombie collector waiting for pid 2311919
[2025-10-07 17:46:41] 2025-10-07 22:46:22,118 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 17:46:41] 2025-10-07 22:46:22,118 | INFO     | collected zombie processes
[2025-10-07 17:46:41] 2025-10-07 22:46:22,118 | INFO     | will attempt to kill all subprocesses of pid=2311919
[2025-10-07 17:46:41] 2025-10-07 22:46:22,163 | INFO     | process IDs to be killed: [2311919] (in reverse order)
[2025-10-07 17:46:41] 2025-10-07 22:46:22,202 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 17:46:41] 2025-10-07 22:46:22,202 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 17:46:41] 2025-10-07 22:46:22,205 | INFO     | did not find any defunct processes belonging to 2311919
[2025-10-07 17:46:41] 2025-10-07 22:46:22,207 | INFO     | did not find any defunct processes belonging to 2311919
[2025-10-07 17:46:41] 2025-10-07 22:46:22,207 | INFO     | ready for new job
[2025-10-07 17:46:41] 2025-10-07 22:46:22,207 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 17:46:41] 2025-10-07 22:46:22,209 | INFO     | ***************************************
[2025-10-07 17:46:41] 2025-10-07 22:46:22,209 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 17:46:41] 2025-10-07 22:46:22,209 | INFO     | ***************************************
[2025-10-07 17:46:41] 2025-10-07 22:46:22,209 | INFO     | 
[2025-10-07 17:46:41] 2025-10-07 22:46:22,210 | INFO     | architecture information:
[2025-10-07 17:46:41] 2025-10-07 22:46:22,210 | INFO     | executing command: cat /etc/os-release
[2025-10-07 17:46:41] 2025-10-07 22:46:22,218 | INFO     | cat /etc/os-release:
[2025-10-07 17:46:41] NAME="CentOS Linux"
[2025-10-07 17:46:41] VERSION="7 (Core)"
[2025-10-07 17:46:41] ID="centos"
[2025-10-07 17:46:41] ID_LIKE="rhel fedora"
[2025-10-07 17:46:41] VERSION_ID="7"
[2025-10-07 17:46:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 17:46:41] ANSI_COLOR="0;31"
[2025-10-07 17:46:41] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 17:46:41] HOME_URL="https://www.centos.org/"
[2025-10-07 17:46:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 17:46:41] 
[2025-10-07 17:46:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 17:46:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 17:46:41] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 17:46:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 17:46:41] 
[2025-10-07 17:46:41] 2025-10-07 22:46:22,219 | INFO     | ***************************************
[2025-10-07 17:46:41] 2025-10-07 22:46:22,721 | INFO     | executing command: df -mP /var/lib/boinc/slots/5
[2025-10-07 17:46:41] 2025-10-07 22:46:22,729 | INFO     | sufficient remaining disk space (3851486756864 B)
[2025-10-07 17:46:41] 2025-10-07 22:46:22,729 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 17:46:41] 2025-10-07 22:46:22,729 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 17:46:41] 2025-10-07 22:46:22,729 | INFO     | update_server=False
[2025-10-07 17:46:41] 2025-10-07 22:46:22,729 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 17:46:41] 2025-10-07 22:46:22,732 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 17:46:41] 2025-10-07 22:46:22,732 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-10-07 17:46:41] 2025-10-07 22:46:22,732 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 17:46:41] 2025-10-07 22:46:22,732 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 17:46:41] 2025-10-07 22:46:22,733 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 17:46:41] 2025-10-07 22:46:22,733 | INFO     | aborting loop
[2025-10-07 17:46:41] 2025-10-07 22:46:22,733 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 17:46:41] 2025-10-07 22:46:22,733 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 17:46:41] 2025-10-07 22:46:23,170 | INFO     | [monitor] cgroup control has ended
[2025-10-07 17:46:41] 2025-10-07 22:46:23,310 | INFO     | all payload control threads have been joined
[2025-10-07 17:46:41] 2025-10-07 22:46:23,317 | INFO     | all job control threads have been joined
[2025-10-07 17:46:41] 2025-10-07 22:46:23,636 | INFO     | all data control threads have been joined
[2025-10-07 17:46:41] 2025-10-07 22:46:23,737 | INFO     | [job] job monitor thread has finished
[2025-10-07 17:46:41] 2025-10-07 22:46:23,738 | INFO     | [job] retrieve thread has finished
[2025-10-07 17:46:41] 2025-10-07 22:46:23,738 | INFO     | [job] queue monitor thread has finished
[2025-10-07 17:46:41] 2025-10-07 22:46:23,794 | INFO     | [payload] failed_post thread has finished
[2025-10-07 17:46:41] 2025-10-07 22:46:24,076 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 17:46:41] 2025-10-07 22:46:24,315 | INFO     | [payload] control thread has finished
[2025-10-07 17:46:41] 2025-10-07 22:46:24,322 | INFO     | [job] control thread has finished
[2025-10-07 17:46:41] 2025-10-07 22:46:24,391 | INFO     | [job] validate thread has finished
[2025-10-07 17:46:41] 2025-10-07 22:46:24,493 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 17:46:41] 2025-10-07 22:46:24,584 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 17:46:41] 2025-10-07 22:46:24,641 | INFO     | [data] control thread has finished
[2025-10-07 17:46:41] 2025-10-07 22:46:24,737 | INFO     | [data] copytool_out thread has finished
[2025-10-07 17:46:41] 2025-10-07 22:46:24,824 | INFO     | [payload] validate_post thread has finished
[2025-10-07 17:46:41] 2025-10-07 22:46:25,001 | INFO     | [data] copytool_in thread has finished
[2025-10-07 17:46:41] 2025-10-07 22:46:25,409 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 17:46:41] 2025-10-07 22:46:29,414 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 17:46:41] 2025-10-07 22:46:33,249 | INFO     | job.realtimelogging is not enabled
[2025-10-07 17:46:41] 2025-10-07 22:46:34,254 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 17:46:41] 2025-10-07 22:46:36,340 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140087750428480)>', '<ExcThread(monitor, started 140087127959296)>']
[2025-10-07 17:46:41] 2025-10-07 22:46:36,801 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 17:46:41] 2025-10-07 22:46:36,801 | INFO     | [monitor] control thread has ended
[2025-10-07 17:46:41] 2025-10-07 22:46:41,365 | INFO     | all workflow threads have been joined
[2025-10-07 17:46:41] 2025-10-07 22:46:41,365 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 17:46:41] 2025-10-07 22:46:41,366 | INFO     | traces error code: 0
[2025-10-07 17:46:41] 2025-10-07 22:46:41,366 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 17:46:41] 2025-10-07 22:46:41,426 [wrapper] ==== pilot stdout END ====
[2025-10-07 17:46:41] 2025-10-07 22:46:41,427 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 17:46:41] 2025-10-07 22:46:41,428 [wrapper] pilotpid: 2305046
[2025-10-07 17:46:41] 2025-10-07 22:46:41,429 [wrapper] Pilot exit status: 0
[2025-10-07 17:46:41] 2025-10-07 22:46:41,435 [wrapper] pandaids: 6835263749
[2025-10-07 17:46:41] 2025-10-07 22:46:41,453 [wrapper] cleanup supervisor_pilot 2349305 2305047
[2025-10-07 17:46:41] 2025-10-07 22:46:41,455 [wrapper] Test setup, not cleaning
[2025-10-07 17:46:41] 2025-10-07 22:46:41,456 [wrapper] apfmon messages muted
[2025-10-07 17:46:41] 2025-10-07 22:46:41,457 [wrapper] ==== wrapper stdout END ====
[2025-10-07 17:46:41] 2025-10-07 22:46:41,458 [wrapper] ==== wrapper stderr END ====
[2025-10-07 17:46:41]  *** Error codes and diagnostics ***
[2025-10-07 17:46:41]     "exeErrorCode": 0,
[2025-10-07 17:46:41]     "exeErrorDiag": "",
[2025-10-07 17:46:41]     "pilotErrorCode": 0,
[2025-10-07 17:46:41]     "pilotErrorDiag": "",
[2025-10-07 17:46:41]  *** Listing of results directory ***
[2025-10-07 17:46:41] total 396264
[2025-10-07 17:46:41] -rw-r--r--. 1 boinc boinc      5112 Oct  7 15:16 queuedata.json
[2025-10-07 17:46:41] -rw-r--r--. 1 boinc boinc    552446 Oct  7 15:17 pilot3.tar.gz
[2025-10-07 17:46:41] -rwx------. 1 boinc boinc     36292 Oct  7 15:17 runpilot2-wrapper.sh
[2025-10-07 17:46:41] -rw-r--r--. 1 boinc boinc       100 Oct  7 17:19 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 17:46:41] -rwxr-xr-x. 1 boinc boinc      7986 Oct  7 17:19 run_atlas
[2025-10-07 17:46:41] -rw-r--r--. 1 boinc boinc       105 Oct  7 17:19 job.xml
[2025-10-07 17:46:41] -rw-r--r--. 2 boinc boinc 215669307 Oct  7 17:19 EVNT.46376901._003365.pool.root.1
[2025-10-07 17:46:41] -rw-r--r--. 2 boinc boinc     15120 Oct  7 17:19 start_atlas.sh
[2025-10-07 17:46:41] drwxrwx--x. 1 boinc boinc        76 Oct  7 17:19 shared
[2025-10-07 17:46:41] -rw-r--r--. 2 boinc boinc    565606 Oct  7 17:19 input.tar.gz
[2025-10-07 17:46:41] -rw-r--r--. 1 boinc boinc     10054 Oct  7 17:19 init_data.xml
[2025-10-07 17:46:41] -rw-r--r--. 1 boinc boinc         0 Oct  7 17:19 boinc_setup_complete
[2025-10-07 17:46:41] -rw-r--r--. 1 boinc boinc         0 Oct  7 17:19 boinc_lockfile
[2025-10-07 17:46:41] -rw-r--r--. 1 boinc boinc      2519 Oct  7 17:19 pandaJob.out
[2025-10-07 17:46:41] -rw-------. 1 boinc boinc    979849 Oct  7 17:19 agis_schedconf.cvmfs.json
[2025-10-07 17:46:41] -rw-------. 1 boinc boinc   1560401 Oct  7 17:19 agis_ddmendpoints.agis.ALL.json
[2025-10-07 17:46:41] drwx------. 1 boinc boinc       368 Oct  7 17:19 pilot3
[2025-10-07 17:46:41] -rw-------. 1 boinc boinc        95 Oct  7 17:45 pilot_heartbeat.json
[2025-10-07 17:46:41] -rw-r--r--. 1 boinc boinc       529 Oct  7 17:45 boinc_task_state.xml
[2025-10-07 17:46:41] -rw-------. 1 boinc boinc 184978527 Oct  7 17:45 HITS.46376905._135397.pool.root.1
[2025-10-07 17:46:41] -rw-------. 1 boinc boinc      1027 Oct  7 17:46 memory_monitor_summary.json
[2025-10-07 17:46:41] -rw-------. 1 boinc boinc    347018 Oct  7 17:46 log.46376905._135397.job.log.tgz.1
[2025-10-07 17:46:41] -rw-------. 1 boinc boinc      7797 Oct  7 17:46 heartbeat.json
[2025-10-07 17:46:41] -rw-r--r--. 1 boinc boinc      8192 Oct  7 17:46 boinc_mmap_file
[2025-10-07 17:46:41] -rw-r--r--. 1 boinc boinc        27 Oct  7 17:46 wrapper_checkpoint.txt
[2025-10-07 17:46:41] -rw-------. 1 boinc boinc      4626 Oct  7 17:46 pilotlog.txt
[2025-10-07 17:46:41] -rw-------. 1 boinc boinc    276689 Oct  7 17:46 log.46376905._135397.job.log.1
[2025-10-07 17:46:41] -rw-------. 1 boinc boinc       357 Oct  7 17:46 output.list
[2025-10-07 17:46:41] -rw-r--r--. 1 boinc boinc       620 Oct  7 17:46 runtime_log
[2025-10-07 17:46:41] -rw-------. 1 boinc boinc    645120 Oct  7 17:46 result.tar.gz
[2025-10-07 17:46:41] -rw-r--r--. 1 boinc boinc      8727 Oct  7 17:46 runtime_log.err
[2025-10-07 17:46:41] -rw-------. 1 boinc boinc       653 Oct  7 17:46 hRUMDmRITQ8nsSi4ap6QjLDmwznN0nGgGQJmUXzaDmWFXNDmJVyZTm.diag
[2025-10-07 17:46:41] -rw-r--r--. 1 boinc boinc     21697 Oct  7 17:46 stderr.txt
[2025-10-07 17:46:41] HITS file was successfully produced:
[2025-10-07 17:46:41] -rw-------. 1 boinc boinc 184978527 Oct  7 17:45 shared/HITS.pool.root.1
[2025-10-07 17:46:41]  *** Contents of shared directory: ***
[2025-10-07 17:46:41] total 392464
[2025-10-07 17:46:41] -rw-r--r--. 2 boinc boinc 215669307 Oct  7 17:19 ATLAS.root_0
[2025-10-07 17:46:41] -rw-r--r--. 2 boinc boinc     15120 Oct  7 17:19 start_atlas.sh
[2025-10-07 17:46:41] -rw-r--r--. 2 boinc boinc    565606 Oct  7 17:19 input.tar.gz
[2025-10-07 17:46:41] -rw-------. 1 boinc boinc 184978527 Oct  7 17:45 HITS.pool.root.1
[2025-10-07 17:46:41] -rw-------. 1 boinc boinc    645120 Oct  7 17:46 result.tar.gz
17:46:42 (2301162): run_atlas exited; CPU time 17134.459203
17:46:42 (2301162): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN