Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
14:50:23 (13594): wrapper (7.7.26015): starting
14:50:23 (13594): wrapper: running run_atlas (--nthreads 8)
[2025-10-07 14:50:23] Arguments: --nthreads 8
[2025-10-07 14:50:23] Threads: 8
[2025-10-07 14:50:23] Checking for CVMFS
[2025-10-07 14:50:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-10-07 14:50:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-10-07 14:50:23] Running cvmfs_config stat atlas.cern.ch
[2025-10-07 14:50:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-10-07 14:50:24] 2.11.2.0 25047 45932 107600 151444 2 59 18565081 20275201 93 130560 0 50625600 99.975 2164234 22949 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-10-07 14:50:24] CVMFS is ok
[2025-10-07 14:50:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-10-07 14:50:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-10-07 14:50:24] Further information can be found at the LHC@home message board.
[2025-10-07 14:50:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-10-07 14:50:24] Checking for apptainer binary...
[2025-10-07 14:50:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-10-07 14:50:24] Running /usr/bin/apptainer --version
[2025-10-07 14:50:24] apptainer version 1.3.2-1.el7
[2025-10-07 14:50:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-10-07 14:50:25] c-205-37.aglt2.org
[2025-10-07 14:50:25] apptainer works
[2025-10-07 14:50:25] Set ATHENA_PROC_NUMBER=8
[2025-10-07 14:50:25] Set ATHENA_CORE_NUMBER=8
[2025-10-07 14:50:25] Starting ATLAS job with PandaID=6833428385
[2025-10-07 14:50:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-10-07 15:44:05]  *** The last 200 lines of the pilot log: ***
[2025-10-07 15:44:05]  status=None
[2025-10-07 15:44:05]  status_code=0
[2025-10-07 15:44:05]  storage_token=
[2025-10-07 15:44:05]  surl=/tmp/boinchome/slots/0/PanDA_Pilot-6833428385/log.46376905._132190.job.log.tgz.1
[2025-10-07 15:44:05]  turl=davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/93/83/log.46376905._132190.job.log.tgz.1
[2025-10-07 15:44:05]  workdir=None
[2025-10-07 15:44:05] ]
[2025-10-07 15:44:05] 2025-10-07 19:43:24,466 | INFO     | transferring file log.46376905._132190.job.log.tgz.1 from /tmp/boinchome/slots/0/PanDA_Pilot-6833428385/log.46376905._132190.job.log.tgz.1 to /tmp/boinchome/slots/
[2025-10-07 15:44:05] 2025-10-07 19:43:24,466 | INFO     | executing command: /usr/bin/env mv /tmp/boinchome/slots/0/PanDA_Pilot-6833428385/log.46376905._132190.job.log.tgz.1 /tmp/boinchome/slots/0/log.46376905._132190.job
[2025-10-07 15:44:05] 2025-10-07 19:43:24,482 | INFO     | adding to output.list: log.46376905._132190.job.log.tgz.1 davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/mc23_13p6TeV/93/83/log.46376905._132190.job.log.tg
[2025-10-07 15:44:05] 2025-10-07 19:43:24,483 | INFO     | alt stage-out settings: ['pl', 'write_lan', 'w', 'default'], allow_altstageout=False, remain_files=0, has_altstorage=True
[2025-10-07 15:44:05] 2025-10-07 19:43:24,483 | INFO     | summary of transferred files:
[2025-10-07 15:44:05] 2025-10-07 19:43:24,483 | INFO     |  -- lfn=log.46376905._132190.job.log.tgz.1, status_code=0, status=transferred
[2025-10-07 15:44:05] 2025-10-07 19:43:24,484 | INFO     | stage-out finished correctly
[2025-10-07 15:44:05] 2025-10-07 19:43:26,140 | INFO     | time since job start (3167s) is within the limit (172800.0s)
[2025-10-07 15:44:05] 2025-10-07 19:43:26,774 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-10-07 15:44:05] 2025-10-07 19:43:26,857 | INFO     | job 6833428385 has state=finished
[2025-10-07 15:44:05] 2025-10-07 19:43:26,857 | INFO     | preparing for final server update for job 6833428385 in state='finished'
[2025-10-07 15:44:05] 2025-10-07 19:43:26,858 | INFO     | this job has now completed (state=finished)
[2025-10-07 15:44:05] 2025-10-07 19:43:26,858 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-10-07 15:44:05] 2025-10-07 19:43:26,858 | INFO     | log transfer has been attempted: DONE
[2025-10-07 15:44:05] 2025-10-07 19:43:26,859 | INFO     | job 6833428385 has finished - writing final server update
[2025-10-07 15:44:05] 2025-10-07 19:43:26,859 | INFO     | total number of processed events: 400 (read)
[2025-10-07 15:44:05] 2025-10-07 19:43:26,860 | INFO     | executing command: lscpu
[2025-10-07 15:44:05] 2025-10-07 19:43:26,892 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-10-07 15:44:05] 2025-10-07 19:43:28,014 | WARNING  | process 23760 can no longer be monitored (due to stat problems) - aborting
[2025-10-07 15:44:05] 2025-10-07 19:43:28,015 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6833428385/memory_monitor_summary.json (trf name=prmon)
[2025-10-07 15:44:05] 2025-10-07 19:43:28,093 | INFO     | number of running child processes to parent process 23760: 1
[2025-10-07 15:44:05] 2025-10-07 19:43:28,093 | INFO     | maximum number of monitored processes: 6
[2025-10-07 15:44:05] 2025-10-07 19:43:28,145 | INFO     | time since job start (3169s) is within the limit (172800.0s)
[2025-10-07 15:44:05] 2025-10-07 19:43:30,150 | INFO     | time since job start (3171s) is within the limit (172800.0s)
[2025-10-07 15:44:05] 2025-10-07 19:43:30,596 | INFO     | monitor loop #244: job 0:6833428385 is in state 'finished'
[2025-10-07 15:44:05] 2025-10-07 19:43:30,596 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 15:44:05] 2025-10-07 19:43:32,156 | INFO     | time since job start (3173s) is within the limit (172800.0s)
[2025-10-07 15:44:05] 2025-10-07 19:43:33,099 | INFO     | monitor loop #245: job 0:6833428385 is in state 'finished'
[2025-10-07 15:44:05] 2025-10-07 19:43:33,099 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-10-07 15:44:05] 2025-10-07 19:43:33,099 | INFO     | CPU arch script returned: x86-64-v3
[2025-10-07 15:44:05] 2025-10-07 19:43:33,104 | INFO     | found 16 cores (8 cores per socket, 2 sockets) , CPU MHz: 1322.2316250000001
[2025-10-07 15:44:05] 2025-10-07 19:43:33,107 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6833428385/memory_monitor_summary.json (trf name=prmon)
[2025-10-07 15:44:05] 2025-10-07 19:43:33,108 | INFO     | extracted standard info from prmon json
[2025-10-07 15:44:05] 2025-10-07 19:43:33,108 | INFO     | extracted standard memory fields from prmon json
[2025-10-07 15:44:05] 2025-10-07 19:43:33,108 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-10-07 15:44:05] 2025-10-07 19:43:33,109 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-10-07 15:44:05] 2025-10-07 19:43:33,109 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-10-07 15:44:05] 2025-10-07 19:43:33,110 | INFO     | fitting pss+swap vs Time
[2025-10-07 15:44:05] 2025-10-07 19:43:33,111 | INFO     | sum of square deviations: 28242390.0
[2025-10-07 15:44:05] 2025-10-07 19:43:33,111 | INFO     | sum of deviations: -4127993708.0
[2025-10-07 15:44:05] 2025-10-07 19:43:33,111 | INFO     | mean x: 1759864713.0
[2025-10-07 15:44:05] 2025-10-07 19:43:33,111 | INFO     | mean y: 2647878.4
[2025-10-07 15:44:05] 2025-10-07 19:43:33,111 | INFO     | -- intersect: 257229832341.01898
[2025-10-07 15:44:05] 2025-10-07 19:43:33,112 | INFO     | intersect: 257229832341.01898
[2025-10-07 15:44:05] 2025-10-07 19:43:33,112 | INFO     | chi2: 0.036810417869773966
[2025-10-07 15:44:05] 2025-10-07 19:43:33,112 | INFO     | -- intersect: 257229832341.01898
[2025-10-07 15:44:05] 2025-10-07 19:43:33,112 | INFO     | current memory leak: -146.16 B/s (using 45 data points, chi2=0.04)
[2025-10-07 15:44:05] 2025-10-07 19:43:33,112 | INFO     | could have reported an average CPU frequency of 1449 MHz (5 samples)
[2025-10-07 15:44:05] 2025-10-07 19:43:33,113 | INFO     | ..............................
[2025-10-07 15:44:05] 2025-10-07 19:43:33,113 | INFO     | . Timing measurements:
[2025-10-07 15:44:05] 2025-10-07 19:43:33,113 | INFO     | . get job = 0 s
[2025-10-07 15:44:05] 2025-10-07 19:43:33,113 | INFO     | . initial setup = 2 s
[2025-10-07 15:44:05] 2025-10-07 19:43:33,113 | INFO     | . payload setup = 6 s
[2025-10-07 15:44:05] 2025-10-07 19:43:33,113 | INFO     | . stage-in = 0 s
[2025-10-07 15:44:05] 2025-10-07 19:43:33,113 | INFO     | . payload execution = 3138 s
[2025-10-07 15:44:05] 2025-10-07 19:43:33,113 | INFO     | . stage-out = 0 s
[2025-10-07 15:44:05] 2025-10-07 19:43:33,113 | INFO     | . log creation = 0 s
[2025-10-07 15:44:05] 2025-10-07 19:43:33,114 | INFO     | ..............................
[2025-10-07 15:44:05] 2025-10-07 19:43:33,192 | INFO     | 
[2025-10-07 15:44:05] 2025-10-07 19:43:33,193 | INFO     | job summary report
[2025-10-07 15:44:05] 2025-10-07 19:43:33,193 | INFO     | --------------------------------------------------
[2025-10-07 15:44:05] 2025-10-07 19:43:33,193 | INFO     | PanDA job id: 6833428385
[2025-10-07 15:44:05] 2025-10-07 19:43:33,193 | INFO     | task id: 46376905
[2025-10-07 15:44:05] 2025-10-07 19:43:33,193 | INFO     | errors: (none)
[2025-10-07 15:44:05] 2025-10-07 19:43:33,193 | INFO     | status: LOG_TRANSFER = DONE 
[2025-10-07 15:44:05] 2025-10-07 19:43:33,194 | INFO     | pilot state: finished 
[2025-10-07 15:44:05] 2025-10-07 19:43:33,194 | INFO     | transexitcode: 0
[2025-10-07 15:44:05] 2025-10-07 19:43:33,194 | INFO     | exeerrorcode: 0
[2025-10-07 15:44:05] 2025-10-07 19:43:33,194 | INFO     | exeerrordiag: 
[2025-10-07 15:44:05] 2025-10-07 19:43:33,194 | INFO     | exitcode: 0
[2025-10-07 15:44:05] 2025-10-07 19:43:33,194 | INFO     | exitmsg: OK
[2025-10-07 15:44:05] 2025-10-07 19:43:33,194 | INFO     | cpuconsumptiontime: 23206 s
[2025-10-07 15:44:05] 2025-10-07 19:43:33,195 | INFO     | nevents: 400
[2025-10-07 15:44:05] 2025-10-07 19:43:33,195 | INFO     | neventsw: 0
[2025-10-07 15:44:05] 2025-10-07 19:43:33,195 | INFO     | pid: 23760
[2025-10-07 15:44:05] 2025-10-07 19:43:33,195 | INFO     | pgrp: 23760
[2025-10-07 15:44:05] 2025-10-07 19:43:33,195 | INFO     | corecount: 8
[2025-10-07 15:44:05] 2025-10-07 19:43:33,195 | INFO     | event service: False
[2025-10-07 15:44:05] 2025-10-07 19:43:33,196 | INFO     | sizes: {0: 2348706, 1: 2348820, 5: 2349110, 11: 2349166, 3148: 2374534, 3149: 2383715, 3152: 2383715, 3158: 2383941}
[2025-10-07 15:44:05] 2025-10-07 19:43:33,196 | INFO     | --------------------------------------------------
[2025-10-07 15:44:05] 2025-10-07 19:43:33,196 | INFO     | 
[2025-10-07 15:44:05] 2025-10-07 19:43:33,196 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-10-07 15:44:05] 2025-10-07 19:43:33,216 | INFO     | queue jobs had 0 job(s) [purged]
[2025-10-07 15:44:05] 2025-10-07 19:43:33,217 | INFO     | queue payloads had 0 job(s) [purged]
[2025-10-07 15:44:05] 2025-10-07 19:43:33,217 | INFO     | queue data_in had 0 job(s) [purged]
[2025-10-07 15:44:05] 2025-10-07 19:43:33,217 | INFO     | queue data_out had 0 job(s) [purged]
[2025-10-07 15:44:05] 2025-10-07 19:43:33,218 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-10-07 15:44:05] 2025-10-07 19:43:33,218 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-10-07 15:44:05] 2025-10-07 19:43:33,218 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-10-07 15:44:05] 2025-10-07 19:43:33,218 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-10-07 15:44:05] 2025-10-07 19:43:33,218 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-10-07 15:44:05] 2025-10-07 19:43:33,218 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-10-07 15:44:05] 2025-10-07 19:43:33,219 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-10-07 15:44:05] 2025-10-07 19:43:33,219 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-10-07 15:44:05] 2025-10-07 19:43:33,219 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-10-07 15:44:05] 2025-10-07 19:43:33,219 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-10-07 15:44:05] 2025-10-07 19:43:33,219 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-10-07 15:44:05] 2025-10-07 19:43:33,220 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-10-07 15:44:05] 2025-10-07 19:43:33,220 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-10-07 15:44:05] 2025-10-07 19:43:33,220 | INFO     | queue completed_jobids has 1 job(s)
[2025-10-07 15:44:05] 2025-10-07 19:43:33,220 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-10-07 15:44:05] 2025-10-07 19:43:33,220 | INFO     | queue messages had 0 job(s) [purged]
[2025-10-07 15:44:05] 2025-10-07 19:43:33,221 | INFO     | job 6833428385 has completed (purged errors)
[2025-10-07 15:44:05] 2025-10-07 19:43:33,221 | INFO     | overall cleanup function is called
[2025-10-07 15:44:05] 2025-10-07 19:43:33,331 | INFO     | PID=17293 has CPU usage=7.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-07 15:44:05] 2025-10-07 19:43:34,230 | INFO     | --- collectZombieJob: --- 10, [23760]
[2025-10-07 15:44:05] 2025-10-07 19:43:34,230 | INFO     | zombie collector waiting for pid 23760
[2025-10-07 15:44:05] 2025-10-07 19:43:34,230 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-10-07 15:44:05] 2025-10-07 19:43:34,230 | INFO     | collected zombie processes
[2025-10-07 15:44:05] 2025-10-07 19:43:34,230 | INFO     | will attempt to kill all subprocesses of pid=23760
[2025-10-07 15:44:05] 2025-10-07 19:43:34,342 | INFO     | process IDs to be killed: [23760] (in reverse order)
[2025-10-07 15:44:05] 2025-10-07 19:43:34,398 | WARNING  | found no corresponding commands to process id(s)
[2025-10-07 15:44:05] 2025-10-07 19:43:34,398 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-10-07 15:44:05] 2025-10-07 19:43:34,402 | INFO     | did not find any defunct processes belonging to 23760
[2025-10-07 15:44:05] 2025-10-07 19:43:34,406 | INFO     | did not find any defunct processes belonging to 23760
[2025-10-07 15:44:05] 2025-10-07 19:43:34,406 | INFO     | ready for new job
[2025-10-07 15:44:05] 2025-10-07 19:43:34,406 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-10-07 15:44:05] 2025-10-07 19:43:34,408 | INFO     | ***************************************
[2025-10-07 15:44:05] 2025-10-07 19:43:34,408 | INFO     | ***  PanDA Pilot version 3.10.5.57  ***
[2025-10-07 15:44:05] 2025-10-07 19:43:34,408 | INFO     | ***************************************
[2025-10-07 15:44:05] 2025-10-07 19:43:34,408 | INFO     | 
[2025-10-07 15:44:05] 2025-10-07 19:43:34,410 | INFO     | architecture information:
[2025-10-07 15:44:05] 2025-10-07 19:43:34,410 | INFO     | executing command: cat /etc/os-release
[2025-10-07 15:44:05] 2025-10-07 19:43:34,423 | INFO     | cat /etc/os-release:
[2025-10-07 15:44:05] NAME="CentOS Linux"
[2025-10-07 15:44:05] VERSION="7 (Core)"
[2025-10-07 15:44:05] ID="centos"
[2025-10-07 15:44:05] ID_LIKE="rhel fedora"
[2025-10-07 15:44:05] VERSION_ID="7"
[2025-10-07 15:44:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-10-07 15:44:05] ANSI_COLOR="0;31"
[2025-10-07 15:44:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-10-07 15:44:05] HOME_URL="https://www.centos.org/"
[2025-10-07 15:44:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-10-07 15:44:05] 
[2025-10-07 15:44:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-10-07 15:44:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-10-07 15:44:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-10-07 15:44:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-10-07 15:44:05] 
[2025-10-07 15:44:05] 2025-10-07 19:43:34,423 | INFO     | ***************************************
[2025-10-07 15:44:05] 2025-10-07 19:43:34,926 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-10-07 15:44:05] 2025-10-07 19:43:34,942 | INFO     | sufficient remaining disk space (33449574400 B)
[2025-10-07 15:44:05] 2025-10-07 19:43:34,943 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-10-07 15:44:05] 2025-10-07 19:43:34,943 | INFO     | current server update state: UPDATING_FINAL
[2025-10-07 15:44:05] 2025-10-07 19:43:34,943 | INFO     | update_server=False
[2025-10-07 15:44:05] 2025-10-07 19:43:34,943 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-10-07 15:44:05] 2025-10-07 19:43:34,943 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-10-07 15:44:05] 2025-10-07 19:43:34,944 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-10-07 15:44:05] 2025-10-07 19:43:34,944 | INFO     | aborting loop
[2025-10-07 15:44:05] 2025-10-07 19:43:35,051 | INFO     | all payload control threads have been joined
[2025-10-07 15:44:05] 2025-10-07 19:43:35,076 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-10-07 15:44:05] 2025-10-07 19:43:35,376 | INFO     | all data control threads have been joined
[2025-10-07 15:44:05] 2025-10-07 19:43:35,772 | INFO     | all job control threads have been joined
[2025-10-07 15:44:05] 2025-10-07 19:43:35,949 | INFO     | [job] retrieve thread has finished
[2025-10-07 15:44:05] 2025-10-07 19:43:35,950 | INFO     | [job] queue monitor thread has finished
[2025-10-07 15:44:05] 2025-10-07 19:43:35,950 | INFO     | [job] job monitor thread has finished
[2025-10-07 15:44:05] 2025-10-07 19:43:36,057 | INFO     | [payload] control thread has finished
[2025-10-07 15:44:05] 2025-10-07 19:43:36,130 | INFO     | [payload] validate_post thread has finished
[2025-10-07 15:44:05] 2025-10-07 19:43:36,188 | INFO     | [data] copytool_in thread has finished
[2025-10-07 15:44:05] 2025-10-07 19:43:36,381 | INFO     | [data] control thread has finished
[2025-10-07 15:44:05] 2025-10-07 19:43:36,539 | INFO     | [payload] execute_payloads thread has finished
[2025-10-07 15:44:05] 2025-10-07 19:43:36,778 | INFO     | [job] control thread has finished
[2025-10-07 15:44:05] 2025-10-07 19:43:36,912 | INFO     | [payload] failed_post thread has finished
[2025-10-07 15:44:05] 2025-10-07 19:43:37,021 | INFO     | [job] validate thread has finished
[2025-10-07 15:44:05] 2025-10-07 19:43:37,082 | INFO     | [data] copytool_out thread has finished
[2025-10-07 15:44:05] 2025-10-07 19:43:37,174 | INFO     | [job] create_data_payload thread has finished
[2025-10-07 15:44:05] 2025-10-07 19:43:37,288 | INFO     | [payload] run_realtimelog thread has finished
[2025-10-07 15:44:05] 2025-10-07 19:43:37,320 | INFO     | [payload] validate_pre thread has finished
[2025-10-07 15:44:05] 2025-10-07 19:43:37,366 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-10-07 15:44:05] 2025-10-07 19:43:41,372 | INFO     | [data] queue_monitor thread has finished
[2025-10-07 15:44:05] 2025-10-07 19:43:42,349 | INFO     | [monitor] cgroup control has ended
[2025-10-07 15:44:05] 2025-10-07 19:43:42,693 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139800148502336)>', '<ExcThread(monitor, started 139799921170176)>']
[2025-10-07 15:44:05] 2025-10-07 19:43:47,718 | INFO     | all workflow threads have been joined
[2025-10-07 15:44:05] 2025-10-07 19:43:47,719 | INFO     | end of generic workflow (traces error code: 0)
[2025-10-07 15:44:05] 2025-10-07 19:43:47,719 | INFO     | traces error code: 0
[2025-10-07 15:44:05] 2025-10-07 19:43:47,719 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-10-07 15:44:05] 2025-10-07 19:44:05,549 | INFO     | PID=17293 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-10-07 15:44:05] 2025-10-07 19:44:05,550 | INFO     | found 0 job(s) in 20 queues
[2025-10-07 15:44:05] 2025-10-07 19:44:05,550 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-10-07 15:44:05] 2025-10-07 19:44:05,550 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-10-07 15:44:05] 2025-10-07 19:44:05,550 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-10-07 15:44:05] 2025-10-07 19:44:05,550 | INFO     | [monitor] control thread has ended
[2025-10-07 15:44:05] 2025-10-07 19:44:05,645 [wrapper] ==== pilot stdout END ====
[2025-10-07 15:44:05] 2025-10-07 19:44:05,649 [wrapper] ==== wrapper stdout RESUME ====
[2025-10-07 15:44:05] 2025-10-07 19:44:05,652 [wrapper] pilotpid: 17293
[2025-10-07 15:44:05] 2025-10-07 19:44:05,656 [wrapper] Pilot exit status: 0
[2025-10-07 15:44:05] 2025-10-07 19:44:05,669 [wrapper] pandaids: 6833428385
[2025-10-07 15:44:05] 2025-10-07 19:44:05,710 [wrapper] cleanup supervisor_pilot 14440 17294
[2025-10-07 15:44:05] 2025-10-07 19:44:05,714 [wrapper] Test setup, not cleaning
[2025-10-07 15:44:05] 2025-10-07 19:44:05,718 [wrapper] apfmon messages muted
[2025-10-07 15:44:05] 2025-10-07 19:44:05,721 [wrapper] ==== wrapper stdout END ====
[2025-10-07 15:44:05] 2025-10-07 19:44:05,725 [wrapper] ==== wrapper stderr END ====
[2025-10-07 15:44:05]  *** Error codes and diagnostics ***
[2025-10-07 15:44:05]     "exeErrorCode": 0,
[2025-10-07 15:44:05]     "exeErrorDiag": "",
[2025-10-07 15:44:05]     "pilotErrorCode": 0,
[2025-10-07 15:44:05]     "pilotErrorDiag": "",
[2025-10-07 15:44:05]  *** Listing of results directory ***
[2025-10-07 15:44:05] total 382712
[2025-10-07 15:44:05] -rw-r--r-- 1 boincer umatlas    552446 Oct  7 05:36 pilot3.tar.gz
[2025-10-07 15:44:05] -rwx------ 1 boincer umatlas     36292 Oct  7 05:44 runpilot2-wrapper.sh
[2025-10-07 15:44:05] -rw-r--r-- 1 boincer umatlas      5112 Oct  7 05:44 queuedata.json
[2025-10-07 15:44:05] -rw-r--r-- 1 boincer umatlas       100 Oct  7 14:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-10-07 15:44:05] -rwxr-xr-x 1 boincer umatlas      7986 Oct  7 14:50 run_atlas
[2025-10-07 15:44:05] -rw-r--r-- 1 boincer umatlas       105 Oct  7 14:50 job.xml
[2025-10-07 15:44:05] -rw-r--r-- 2 boincer umatlas 213261063 Oct  7 14:50 EVNT.46376901._004921.pool.root.1
[2025-10-07 15:44:05] -rw-r--r-- 2 boincer umatlas     15120 Oct  7 14:50 start_atlas.sh
[2025-10-07 15:44:05] drwxrwx--x 2 boincer umatlas      4096 Oct  7 14:50 shared
[2025-10-07 15:44:05] -rw-r--r-- 2 boincer umatlas    565601 Oct  7 14:50 input.tar.gz
[2025-10-07 15:44:05] -rw-r--r-- 1 boincer umatlas         0 Oct  7 14:50 boinc_lockfile
[2025-10-07 15:44:05] -rw-r--r-- 1 boincer umatlas      2521 Oct  7 14:50 pandaJob.out
[2025-10-07 15:44:05] -rw------- 1 boincer umatlas    977512 Oct  7 14:50 agis_schedconf.cvmfs.json
[2025-10-07 15:44:05] -rw------- 1 boincer umatlas   1560401 Oct  7 14:50 agis_ddmendpoints.agis.ALL.json
[2025-10-07 15:44:05] drwx------ 4 boincer umatlas      4096 Oct  7 14:50 pilot3
[2025-10-07 15:44:05] -rw-r--r-- 1 boincer umatlas      6135 Oct  7 15:40 init_data.xml
[2025-10-07 15:44:05] -rw------- 1 boincer umatlas 173175256 Oct  7 15:42 HITS.46376905._132190.pool.root.1
[2025-10-07 15:44:05] -rw-r--r-- 1 boincer umatlas       529 Oct  7 15:43 boinc_task_state.xml
[2025-10-07 15:44:05] -rw------- 1 boincer umatlas      1047 Oct  7 15:43 memory_monitor_summary.json
[2025-10-07 15:44:05] -rw------- 1 boincer umatlas    310740 Oct  7 15:43 log.46376905._132190.job.log.tgz.1
[2025-10-07 15:44:05] -rw------- 1 boincer umatlas      7846 Oct  7 15:43 heartbeat.json
[2025-10-07 15:44:05] -rw-r--r-- 1 boincer umatlas      8192 Oct  7 15:43 boinc_mmap_file
[2025-10-07 15:44:05] -rw-r--r-- 1 boincer umatlas        27 Oct  7 15:43 wrapper_checkpoint.txt
[2025-10-07 15:44:05] -rw------- 1 boincer umatlas       745 Oct  7 15:44 pilotlog.txt
[2025-10-07 15:44:05] -rw------- 1 boincer umatlas        95 Oct  7 15:44 pilot_heartbeat.json
[2025-10-07 15:44:05] -rw------- 1 boincer umatlas    476963 Oct  7 15:44 log.46376905._132190.job.log.1
[2025-10-07 15:44:05] -rw------- 1 boincer umatlas       357 Oct  7 15:44 output.list
[2025-10-07 15:44:05] -rw-r--r-- 1 boincer umatlas       620 Oct  7 15:44 runtime_log
[2025-10-07 15:44:05] -rw------- 1 boincer umatlas    808960 Oct  7 15:44 result.tar.gz
[2025-10-07 15:44:05] -rw------- 1 boincer umatlas       656 Oct  7 15:44 ZMZKDmIQJQ8n9Rq4apOajLDm4fhM0noT9bVof3QYDmySLMDm2PI1Sm.diag
[2025-10-07 15:44:05] -rw-r--r-- 1 boincer umatlas      8703 Oct  7 15:44 runtime_log.err
[2025-10-07 15:44:05] -rw-r--r-- 1 boincer umatlas     22125 Oct  7 15:44 stderr.txt
[2025-10-07 15:44:05] HITS file was successfully produced:
[2025-10-07 15:44:05] -rw------- 1 boincer umatlas 173175256 Oct  7 15:42 shared/HITS.pool.root.1
[2025-10-07 15:44:05]  *** Contents of shared directory: ***
[2025-10-07 15:44:05] total 378752
[2025-10-07 15:44:05] -rw-r--r-- 2 boincer umatlas 213261063 Oct  7 14:50 ATLAS.root_0
[2025-10-07 15:44:05] -rw-r--r-- 2 boincer umatlas     15120 Oct  7 14:50 start_atlas.sh
[2025-10-07 15:44:05] -rw-r--r-- 2 boincer umatlas    565601 Oct  7 14:50 input.tar.gz
[2025-10-07 15:44:05] -rw------- 1 boincer umatlas 173175256 Oct  7 15:42 HITS.pool.root.1
[2025-10-07 15:44:05] -rw------- 1 boincer umatlas    808960 Oct  7 15:44 result.tar.gz
15:44:07 (13594): run_atlas exited; CPU time 23193.256604
15:44:07 (13594): called boinc_finish(0)

</stderr_txt>
]]>

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